Prupe.1G334800_v2.0.a1

MACPF domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0014090
Physical Location & Seq
Reverse (-)
31641177 .. 31645354
4178 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G334800.1

Sequence Viewer

Length: 1893 bp
ATGAGTGGCGGTGATGATATCGTGGAGATGGCTGTAAGTAGCCTAGGCAAAGGGTTTGATTTAACCTCAGATTTCCGGCTCAAGTACTGCAAAGGCAAACAAAGACTGGTTTTGCTCAACGACGCTGATAAAAAAGAACTCGCAGTCCCTGGCTTCGGGTCCATTCAACAAGTCTCCACCGATATTAAATGTGACAAAGGCGATCGTACACGTTACCAATCCGATATCCTCACATTCAATCAGATGTCGCAATATTTCAACCAAAAGGCGAGTGTGCCTGGGAAAATCCCATCAGGGTTGTTCAACGCCATGTTTGGTTTCGAAAGTGGTTCGTGGGCAGCGGATGCAGCCAAAATCAAACACTTGGCTCTGGATGGTTACTTCATCATCTTCTTCAATGTTCATATCGATAGGTACCCTCTTGTTCTTGCCGATCAAGTTCGTCATTCTGTTCCGTCCACTTGGGATCCCCCTGCCCTTGCAAGGTTCATAGAGAAGTATGGGACTCACATCGTGGTGGGATTGAGTATTGGGGGCGAGGATGTGGTGTTAGTAAAGCAAGATAAATCTTCTAACATGGAGCCATCTGACCTCAAAAATCACTTGAACGAGCTTGGAGATCAGCACTTTACAGGGACATGCAATTTCTCCCCATTACACTCCAAAGCAAAAGACCAAAGACACAAGGCACCACCGGCCTTCAATGTCTTTCATCATGATCCCAAGTCTGTGGCCCTTAATGGCTTCTCCACCGCAAACACAAAAGATGGTATTAGCGTGATAGGCTATAAAAGAGGAGGAGATCCCTTGGCCAGTAGCCACTGCGAGTGGCTTCAAACCGTTGGATCGATGCCGGATGCGATTCAATTTAACTGCATTCCCATCACGTCTCTACTTAAAGATGTGCCCGGCAAAGGTTTCTTATCCCATGCCATCAACCTCTATCTTCGATACAAGCCTCCTATAGCTGATTTGCAATACTTTCTTGACTTTCAAGCCCACAAACTTTGGGCTCCTGTTCTCAATGACCTGGCTCTAGGTCCTGCCACAAATAGGGCCACGCAGGCGCCTGCTCTTCACTTCAGCTTGATGGGTCCTAAACTATATGTAAACACTGCACAGGTTAGAGTTGGAAATAGGCCTGTCATAGGAATGCGCTTGTATCTCGAGGGCAGGAAATGCAACAGGCTAGCTGTGCACCTCCAACATCTATCAAACACTCCATTTATGTTGCAGCAGAACAAGATAGATCCTGAGCCACCAACATGGCGAGGATCAGATGACATCGGGGACGACCGCTACTTCGAAGCAATAAACTGGAAAAGATTTTCCCATGTCTGCACGGTGCCAGTAAAATACGACCCCAATTGGACGTCCTCCAACAAAACTGCGGCCTTCGTAGTCTCCGGAGCTCAACTTGTCGTGAAGCATCATGAGACAAAGAGTGTTCTCCATCTCCGGCTTTTGTTCACCAAAGTCTCAGATTGTTTTCTAGTCCAATCAAACTGGACAGAGAGCCCCTCTCAACTTTCTCAAAAGTCAACCTCGTCTGGCCTCTTCAGTGCAATAAGCACATCAATTTCGGGCAATAATTGGGTGAGGGAGAAAGTGCAGCCTGATGACGATCAAGTGATTGTGGACTCAAGTGTGTTTCCTACGGGGCCTCCGGTGCCATTGCAGTTACAGAAGTTTGTGAAATACGTGGACATGTCACATCTGTGTAGGGGCCCACAGGATAATCCTGGGTATTGGTTGGTCACTGGAGCGAAGTTGAACTTGGTGAAGGGCAAGATTAGTTTGCAAGTCAAGTTTTCTTTACTCAACATGTCTTCGCCAGCAACTTCTCCTACTCTTCGAGACCTCATGTACAATATTAATGTCGGGGAAGCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
MACPF

Protein Analysis

631

Amino Acids

69.88

Weight (kDa)

8.87

Isoelectric Point (pI)

33.58

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014090)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G14780
fragaria_vesca FvH4_4g33390
malus_domestica MD13G1019100.v1.1
prunus_persica Prupe.1G334800_v2.0.a1
pyrus_communis pycom13g01620 pycom16g01550
rosa_chinensis RchiOBHm_Chr4g0442651
rosa_laevigata RLG00000005994
rosa_multiflora Rmu_co8443405.1_g000001 Rmu_ssc0000204.1_g000031
rosa_roxburghii Rroxscaffold_5G00383460
rosa_rugosa Rorug04G0341900
rosa_samantha Rh4AG394400 Rh4BG407400 Rh4CG422800 Rh4DG401400
rosa_wichuraiana Rw4G034080

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1376
Acc65I GGTACC 1 cut(s) 414
AccB1I GGYRCC 5 cut(s) 414, 688, 1066, 1345, 1669
AccIII TCCGGA 1 cut(s) 1406
AciI CCGC 5 cut(s) 9, 341, 753, 1297, 1391
AclWI GGATC 7 cut(s) 461, 474, 713, 797, 853, 1244, 1282
AcoI YGGCCR 1 cut(s) 810
AcuI CTGAAG 2 cut(s) 1066, 1543
AcyI GRCGYC 2 cut(s) 1067, 1373
AdeI CACNNNGTG 1 cut(s) 514
AfaI GTAC 4 cut(s) 86, 208, 416, 1868
AfiI CCNNNNNNNGG 5 cut(s) 155, 483, 914, 1053, 1148
AflIII ACRYGT 3 cut(s) 209, 1707, 1824
AjiI CACGTC 1 cut(s) 888
AjnI CCWGG 4 cut(s) 148, 277, 1029, 1741
AjuI GAANNNNNNNTTGG 2 cut(s) 1760, 1792
AleI CACNNNNGTG 1 cut(s) 1717
AloI GAACNNNNNNTCC 2 cut(s) 129, 161
AluBI AGCT 5 cut(s) 613, 968, 1086, 1193, 1412
AluI AGCT 5 cut(s) 613, 968, 1086, 1193, 1412
Alw21I GWGCWC 2 cut(s) 1200, 1414
Alw26I GTCTC 6 cut(s) 178, 894, 1408, 1430, 1483, 1851
Alw44I GTGCAC 1 cut(s) 1196
AlwI GGATC 7 cut(s) 461, 474, 713, 797, 853, 1244, 1282
AlwNI CAGNNNCTG 1 cut(s) 149
Ama87I CYCGRG 1 cut(s) 1166
Aor13HI TCCGGA 1 cut(s) 1406
AoxI GGCC 9 cut(s) 696, 732, 810, 1056, 1139, 1392, 1552, 1661, 1726
ApaI GGGCCC 1 cut(s) 1730
ApaLI GTGCAC 1 cut(s) 1196
ApeKI GCWGC 4 cut(s) 338, 347, 1234, 1612
ArsI GACNNNNNNTTYG 2 cut(s) 1286, 1318
AseI ATTAAT 1 cut(s) 1875
Asp718I GGTACC 1 cut(s) 414
AspA2I CCTAGG 1 cut(s) 43
AspLEI GCGC 2 cut(s) 1069, 1158
AspS9I GGNCC 8 cut(s) 159, 733, 1040, 1056, 1094, 1661, 1726, 1727
AsuC2I CCSGG 1 cut(s) 909
AsuHPI GGTGA 4 cut(s) 23, 1462, 1609, 1792
AsuII TTCGAA 2 cut(s) 321, 1305
AsuNHI GCTAGC 1 cut(s) 1189
AvaI CYCGRG 1 cut(s) 1166
AvaII GGWCC 3 cut(s) 159, 1040, 1094
AvrII CCTAGG 1 cut(s) 43
BaeGI GKGCMC 3 cut(s) 909, 1200, 1730
BalI TGGCCA 1 cut(s) 812
BamHI GGATCC 1 cut(s) 466
BanI GGYRCC 5 cut(s) 414, 688, 1066, 1345, 1669
BanII GRGCYC 4 cut(s) 1015, 1414, 1520, 1730
BbsI GAAGAC 1 cut(s) 1821
Bbv12I GWGCWC 2 cut(s) 1200, 1414
BbvI GCAGC 4 cut(s) 350, 359, 1246, 1624
BccI CCATC 9 cut(s) 22, 298, 368, 592, 761, 890, 941, 1084, 1461
BciT130I CCWGG 4 cut(s) 150, 279, 1031, 1743
BcnI CCSGG 1 cut(s) 909
BcoDI GTCTC 6 cut(s) 178, 894, 1408, 1430, 1483, 1851
BfaI CTAG 4 cut(s) 44, 1037, 1190, 1493
BfmI CTRYAG 1 cut(s) 963
BfoI RGCGCY 1 cut(s) 1070
BglI GCCNNNNNGGC 1 cut(s) 1064
BisI GCNGC 5 cut(s) 339, 348, 1235, 1392, 1613
BlnI CCTAGG 1 cut(s) 43
BlsI GCNGC 5 cut(s) 340, 349, 1236, 1393, 1614
BmcAI AGTACT 1 cut(s) 86
Bme1390I CCNGG 5 cut(s) 150, 279, 909, 1031, 1743
Bme18I GGWCC 3 cut(s) 159, 1040, 1094
BmeT110I CYCGRG 1 cut(s) 1166
BmgBI CACGTC 1 cut(s) 888
BmgT120I GGNCC 8 cut(s) 159, 733, 1040, 1056, 1094, 1661, 1726, 1727
BmrFI CCNGG 5 cut(s) 150, 279, 909, 1031, 1743
BmsI GCATC 4 cut(s) 334, 840, 847, 1438
BmtI GCTAGC 1 cut(s) 1193
BpiI GAAGAC 1 cut(s) 1821
BplI GAGNNNNNCTC 4 cut(s) 1505, 1537, 1507, 1539
BpmI CTGGAG 1 cut(s) 1782
Bpu10I CCTNAGC 1 cut(s) 1254
Bpu14I TTCGAA 2 cut(s) 321, 1305
BpuEI CTTGAG 2 cut(s) 65, 1627
BpuMI CCSGG 1 cut(s) 909
Bsa29I ATCGAT 2 cut(s) 408, 848
BsaAI YACGTR 1 cut(s) 1702
BsaBI GATNNNNATC 1 cut(s) 1623
BsaHI GRCGYC 2 cut(s) 1067, 1373
BsaI GGTCTC 1 cut(s) 1851
BsaJI CCNNGG 5 cut(s) 43, 148, 278, 807, 1742
BsaWI WCCGGW 2 cut(s) 1406, 1666
BsaXI ACNNNNNCTCC 2 cut(s) 1648, 1678
Bsc4I CCNNNNNNNGG 5 cut(s) 155, 483, 914, 1053, 1148
Bse118I RCCGGY 1 cut(s) 694
Bse1I ACTGG 6 cut(s) 111, 813, 1322, 1349, 1511, 1765
Bse3DI GCAATG 1 cut(s) 1673
Bse8I GATNNNNATC 1 cut(s) 1623
BseAI TCCGGA 1 cut(s) 1406
BseBI CCWGG 4 cut(s) 150, 279, 1031, 1743
BseCI ATCGAT 2 cut(s) 408, 848
BseDI CCNNGG 5 cut(s) 43, 148, 278, 807, 1742
BseGI GGATG 4 cut(s) 349, 379, 547, 862
BseJI GATNNNNATC 1 cut(s) 1623
BseLI CCNNNNNNNGG 5 cut(s) 155, 483, 914, 1053, 1148
BseMI GCAATG 1 cut(s) 1673
BseMII CTCAG 3 cut(s) 81, 1245, 1494
BseNI ACTGG 6 cut(s) 111, 813, 1322, 1349, 1511, 1765
BseRI GAGGAG 2 cut(s) 810, 813
BseSI GKGCMC 3 cut(s) 909, 1200, 1730
BseXI GCAGC 4 cut(s) 350, 359, 1246, 1624
BsgI GTGCAG 3 cut(s) 1101, 1324, 1631
Bsh1285I CGRYCG 2 cut(s) 205, 1297
BshFI GGCC 9 cut(s) 698, 734, 812, 1058, 1141, 1394, 1554, 1663, 1728
BshNI GGYRCC 5 cut(s) 414, 688, 1066, 1345, 1669
BshVI ATCGAT 2 cut(s) 408, 848
BsiEI CGRYCG 2 cut(s) 205, 1297
BsiHKAI GWGCWC 2 cut(s) 1200, 1414
BsiHKCI CYCGRG 1 cut(s) 1166
BsiSI CCGG 7 cut(s) 76, 695, 854, 909, 1407, 1459, 1667
BslFI GGGAC 4 cut(s) 131, 517, 649, 1304
BslI CCNNNNNNNGG 5 cut(s) 155, 483, 914, 1053, 1148
BsmAI GTCTC 6 cut(s) 178, 894, 1408, 1430, 1483, 1851
BsmBI CGTCTC 1 cut(s) 894
BsmFI GGGAC 4 cut(s) 131, 517, 649, 1304
BsmI GAATGC 2 cut(s) 876, 1158
BsnI GGCC 9 cut(s) 698, 734, 812, 1058, 1141, 1394, 1554, 1663, 1728
Bso31I GGTCTC 1 cut(s) 1851
BsoBI CYCGRG 1 cut(s) 1166
Bsp119I TTCGAA 2 cut(s) 321, 1305
Bsp120I GGGCCC 1 cut(s) 1726
Bsp1286I GDGCHC 6 cut(s) 909, 1015, 1200, 1414, 1520, 1730
Bsp13I TCCGGA 1 cut(s) 1406
Bsp1407I TGTACA 1 cut(s) 1866
BspACI CCGC 5 cut(s) 9, 341, 753, 1297, 1391
BspANI GGCC 9 cut(s) 698, 734, 812, 1058, 1141, 1394, 1554, 1663, 1728
BspCNI CTCAG 3 cut(s) 80, 1246, 1493
BspDI ATCGAT 2 cut(s) 408, 848
BspEI TCCGGA 1 cut(s) 1406
BspHI TCATGA 2 cut(s) 715, 1432
BspOI GCTAGC 1 cut(s) 1193
BspPI GGATC 7 cut(s) 461, 474, 713, 797, 853, 1244, 1282
BspQI GCTCTTC 1 cut(s) 1080
BspT104I TTCGAA 2 cut(s) 321, 1305
BspT107I GGYRCC 5 cut(s) 414, 688, 1066, 1345, 1669
BspTNI GGTCTC 1 cut(s) 1851
BsrDI GCAATG 1 cut(s) 1673
BsrFI RCCGGY 1 cut(s) 694
BsrGI TGTACA 1 cut(s) 1866
BsrI ACTGG 6 cut(s) 111, 813, 1322, 1349, 1511, 1765
BssAI RCCGGY 1 cut(s) 694
BssECI CCNNGG 5 cut(s) 43, 148, 278, 807, 1742
BssNI GRCGYC 2 cut(s) 1067, 1373
BssT1I CCWWGG 2 cut(s) 43, 807
Bst2UI CCWGG 4 cut(s) 150, 279, 1031, 1743
Bst4CI ACNGT 2 cut(s) 841, 1345
Bst6I CTCTTC 3 cut(s) 1080, 1562, 1857
BstACI GRCGYC 2 cut(s) 1067, 1373
BstAPI GCANNNNNTGC 2 cut(s) 344, 1179
BstAUI TGTACA 1 cut(s) 1866
BstBAI YACGTR 1 cut(s) 1702
BstBI TTCGAA 2 cut(s) 321, 1305
BstC8I GCNNGC 4 cut(s) 1065, 1071, 1191, 1836
BstDEI CTNAG 3 cut(s) 67, 1254, 1480
BstENI CCTNNNNNAGG 1 cut(s) 1146
BstF5I GGATG 4 cut(s) 349, 379, 547, 862
BstH2I RGCGCY 1 cut(s) 1070
BstHHI GCGC 2 cut(s) 1069, 1158
BstMAI GTCTC 6 cut(s) 178, 894, 1408, 1430, 1483, 1851
BstMCI CGRYCG 2 cut(s) 205, 1297
BstMWI GCNNNNNNNGC 8 cut(s) 344, 347, 695, 783, 1064, 1179, 1195, 1669
BstNI CCWGG 4 cut(s) 150, 279, 1031, 1743
BstNSI RCATGY 3 cut(s) 642, 1711, 1828
BstSCI CCNGG 5 cut(s) 148, 277, 907, 1029, 1741
BstSFI CTRYAG 1 cut(s) 963
BstSLI GKGCMC 3 cut(s) 909, 1200, 1730
BstV1I GCAGC 4 cut(s) 350, 359, 1246, 1624
BstV2I GAAGAC 1 cut(s) 1821
BstX2I RGATCY 3 cut(s) 466, 802, 1249
BstXI CCANNNNNNTGG 2 cut(s) 730, 1266
BstYI RGATCY 3 cut(s) 466, 802, 1249
Bsu15I ATCGAT 2 cut(s) 408, 848
BsuRI GGCC 9 cut(s) 698, 734, 812, 1058, 1141, 1394, 1554, 1663, 1728
BsuTUI ATCGAT 2 cut(s) 408, 848
BtrI CACGTC 1 cut(s) 888
BtsCI GGATG 4 cut(s) 349, 379, 547, 862
BtsI GCAGTG 2 cut(s) 820, 1113
BtsIMutI CAGTG 4 cut(s) 820, 1113, 1567, 1758
Cac8I GCNNGC 4 cut(s) 1065, 1071, 1191, 1836
CaiI CAGNNNCTG 1 cut(s) 149
CciI TCATGA 2 cut(s) 715, 1432
CfoI GCGC 2 cut(s) 1069, 1158
Cfr10I RCCGGY 1 cut(s) 694
Cfr13I GGNCC 8 cut(s) 159, 733, 1040, 1056, 1094, 1661, 1726, 1727
ClaI ATCGAT 2 cut(s) 408, 848
CseI GACGC 1 cut(s) 131
Csp6I GTAC 4 cut(s) 85, 207, 415, 1867
CspCI CAANNNNNGTGG 2 cut(s) 989, 1024
CviQI GTAC 4 cut(s) 85, 207, 415, 1867
DdeI CTNAG 3 cut(s) 67, 1254, 1480
DinI GGCGCC 1 cut(s) 1068
DraIII CACNNNGTG 1 cut(s) 514
EaeI YGGCCR 1 cut(s) 810
Eam1104I CTCTTC 3 cut(s) 1080, 1562, 1857
EarI CTCTTC 3 cut(s) 1080, 1562, 1857
Ecl136II GAGCTC 1 cut(s) 1412
Eco130I CCWWGG 2 cut(s) 43, 807
Eco147I AGGCCT 1 cut(s) 1141
Eco24I GRGCYC 4 cut(s) 1015, 1414, 1520, 1730
Eco31I GGTCTC 1 cut(s) 1851
Eco32I GATATC 2 cut(s) 19, 226
Eco47I GGWCC 3 cut(s) 159, 1040, 1094
Eco53kI GAGCTC 1 cut(s) 1412
Eco57I CTGAAG 2 cut(s) 1066, 1543
Eco88I CYCGRG 1 cut(s) 1166
EcoICRI GAGCTC 1 cut(s) 1412
EcoNI CCTNNNNNAGG 1 cut(s) 1146
EcoO109I RGGNCCY 4 cut(s) 1040, 1094, 1661, 1726
EcoRII CCWGG 4 cut(s) 148, 277, 1029, 1741
EcoRV GATATC 2 cut(s) 19, 226
EcoT14I CCWWGG 2 cut(s) 43, 807
EcoT38I GRGCYC 4 cut(s) 1015, 1414, 1520, 1730
EgeI GGCGCC 1 cut(s) 1068
EheI GGCGCC 1 cut(s) 1068
ErhI CCWWGG 2 cut(s) 43, 807
Esp3I CGTCTC 1 cut(s) 894
FalI AAGNNNNNCTT 2 cut(s) 1760, 1792
FaqI GGGAC 4 cut(s) 131, 517, 649, 1304
Fnu4HI GCNGC 5 cut(s) 339, 348, 1235, 1392, 1613
FokI GGATG 4 cut(s) 356, 386, 554, 869
FriOI GRGCYC 4 cut(s) 1015, 1414, 1520, 1730
Fsp4HI GCNGC 5 cut(s) 339, 348, 1235, 1392, 1613
FspBI CTAG 4 cut(s) 44, 1037, 1190, 1493
GlaI GCGC 2 cut(s) 1068, 1157
GluI GCNGC 5 cut(s) 339, 348, 1235, 1392, 1613
GsuI CTGGAG 1 cut(s) 1782
HaeII RGCGCY 1 cut(s) 1070
HaeIII GGCC 9 cut(s) 698, 734, 812, 1058, 1141, 1394, 1554, 1663, 1728
HapII CCGG 7 cut(s) 76, 695, 854, 909, 1407, 1459, 1667
HgaI GACGC 1 cut(s) 131
HhaI GCGC 2 cut(s) 1069, 1158
Hin1I GRCGYC 2 cut(s) 1067, 1373
Hin6I GCGC 2 cut(s) 1067, 1156
HinP1I GCGC 2 cut(s) 1067, 1156
HincII GTYRAC 1 cut(s) 1542
HindII GTYRAC 1 cut(s) 1542
HinfI GANTC 3 cut(s) 505, 862, 1640
HpaII CCGG 7 cut(s) 76, 695, 854, 909, 1407, 1459, 1667
HphI GGTGA 4 cut(s) 23, 1462, 1609, 1792
Hpy166II GTNNAC 8 cut(s) 209, 459, 1111, 1198, 1470, 1542, 1639, 1705
Hpy188I TCNGA 6 cut(s) 70, 223, 243, 589, 1279, 1483
Hpy188III TCNNGA 9 cut(s) 371, 716, 986, 1166, 1253, 1407, 1423, 1433, 1856
Hpy8I GTNNAC 8 cut(s) 209, 459, 1111, 1198, 1470, 1542, 1639, 1705
Hpy99I CGWCG 1 cut(s) 125
HpyAV CCTTC 3 cut(s) 709, 1405, 1777
HpyCH4III ACNGT 2 cut(s) 841, 1345
HpyCH4IV ACGT 4 cut(s) 211, 887, 1373, 1701
HpyF10VI GCNNNNNNNGC 8 cut(s) 344, 347, 695, 783, 1064, 1179, 1195, 1669
HpyF3I CTNAG 3 cut(s) 67, 1254, 1480
HpySE526I ACGT 4 cut(s) 211, 887, 1373, 1701
Hsp92I GRCGYC 2 cut(s) 1067, 1373
HspAI GCGC 2 cut(s) 1067, 1156
KasI GGCGCC 1 cut(s) 1066
Kpn2I TCCGGA 1 cut(s) 1406
KpnI GGTACC 1 cut(s) 418
LguI GCTCTTC 1 cut(s) 1080
LmnI GCTCC 4 cut(s) 580, 1018, 1409, 1763
Lsp1109I GCAGC 4 cut(s) 350, 359, 1246, 1624
LweI GCATC 4 cut(s) 334, 840, 847, 1438
MaeI CTAG 4 cut(s) 44, 1037, 1190, 1493
MaeII ACGT 4 cut(s) 211, 887, 1373, 1701
MaeIII GTNAC 6 cut(s) 191, 212, 377, 1680, 1710, 1756
MboII GAAGA 8 cut(s) 382, 385, 561, 938, 1067, 1549, 1821, 1844
MfeI CAATTG 1 cut(s) 1366
MflI RGATCY 3 cut(s) 466, 802, 1249
MhlI GDGCHC 6 cut(s) 909, 1015, 1200, 1414, 1520, 1730
MlsI TGGCCA 1 cut(s) 812
MluCI AATT 5 cut(s) 643, 866, 1366, 1578, 1591
MluNI TGGCCA 1 cut(s) 812
Mly113I GGCGCC 1 cut(s) 1067
MlyI GAGTC 2 cut(s) 499, 1634
MmeI TCCRAC 4 cut(s) 823, 1111, 1228, 1404
Mox20I TGGCCA 1 cut(s) 812
MroI TCCGGA 1 cut(s) 1406
MscI TGGCCA 1 cut(s) 812
MseI TTAA 6 cut(s) 62, 186, 738, 870, 897, 1875
MslI CAYNNNNRTG 4 cut(s) 515, 1151, 1264, 1717
Msp20I TGGCCA 1 cut(s) 812
MspA1I CMGCKG 1 cut(s) 341
MspI CCGG 7 cut(s) 76, 695, 854, 909, 1407, 1459, 1667
MspR9I CCNGG 5 cut(s) 150, 279, 909, 1031, 1743
MunI CAATTG 1 cut(s) 1366
Mva1269I GAATGC 2 cut(s) 876, 1158
MvaI CCWGG 4 cut(s) 150, 279, 1031, 1743
MwoI GCNNNNNNNGC 8 cut(s) 344, 347, 695, 783, 1064, 1179, 1195, 1669
NarI GGCGCC 1 cut(s) 1067
NciI CCSGG 1 cut(s) 909
NheI GCTAGC 1 cut(s) 1189
NmuCI GTSAC 3 cut(s) 191, 1710, 1756
NspI RCATGY 3 cut(s) 642, 1711, 1828
NspV TTCGAA 2 cut(s) 321, 1305
OliI CACNNNNGTG 1 cut(s) 1717
PaeR7I CTCGAG 1 cut(s) 1166
PagI TCATGA 2 cut(s) 715, 1432
PceI AGGCCT 1 cut(s) 1141
PciI ACATGT 2 cut(s) 1707, 1824
PciSI GCTCTTC 1 cut(s) 1080
PctI GAATGC 2 cut(s) 876, 1158
PfeI GAWTC 1 cut(s) 862
PkrI GCNGC 5 cut(s) 340, 349, 1236, 1393, 1614
Ple19I CGATCG 1 cut(s) 205
PleI GAGTC 2 cut(s) 499, 1634
PluTI GGCGCC 1 cut(s) 1070
PpsI GAGTC 2 cut(s) 499, 1634
Ppu21I YACGTR 1 cut(s) 1702
PpuMI RGGWCCY 2 cut(s) 1040, 1094
PscI ACATGT 2 cut(s) 1707, 1824
PshBI ATTAAT 1 cut(s) 1875
Psp124BI GAGCTC 1 cut(s) 1414
Psp5II RGGWCCY 2 cut(s) 1040, 1094
Psp6I CCWGG 4 cut(s) 148, 277, 1029, 1741
PspGI CCWGG 4 cut(s) 148, 277, 1029, 1741
PspOMI GGGCCC 1 cut(s) 1726
PspPI GGNCC 8 cut(s) 159, 733, 1040, 1056, 1094, 1661, 1726, 1727
PspPPI RGGWCCY 2 cut(s) 1040, 1094
PstNI CAGNNNCTG 1 cut(s) 149
PsuI RGATCY 3 cut(s) 466, 802, 1249
PvuI CGATCG 1 cut(s) 205
RsaI GTAC 4 cut(s) 86, 208, 416, 1868
RsaNI GTAC 4 cut(s) 85, 207, 415, 1867
RseI CAYNNNNRTG 4 cut(s) 515, 1151, 1264, 1717
SacI GAGCTC 1 cut(s) 1414
SapI GCTCTTC 1 cut(s) 1080
SaqAI TTAA 6 cut(s) 62, 186, 738, 870, 897, 1875
SatI GCNGC 5 cut(s) 339, 348, 1235, 1392, 1613
Sau96I GGNCC 8 cut(s) 159, 733, 1040, 1056, 1094, 1661, 1726, 1727
ScaI AGTACT 1 cut(s) 86
SchI GAGTC 2 cut(s) 499, 1634
ScrFI CCNGG 5 cut(s) 150, 279, 909, 1031, 1743
SduI GDGCHC 6 cut(s) 909, 1015, 1200, 1414, 1520, 1730
SfaNI GCATC 4 cut(s) 334, 840, 847, 1438
SfcI CTRYAG 1 cut(s) 963
SfoI GGCGCC 1 cut(s) 1068
Sfr274I CTCGAG 1 cut(s) 1166
SfuI TTCGAA 2 cut(s) 321, 1305
SinI GGWCC 3 cut(s) 159, 1040, 1094
SlaI CTCGAG 1 cut(s) 1166
SmiMI CAYNNNNRTG 4 cut(s) 515, 1151, 1264, 1717
SmlI CTYRAG 3 cut(s) 80, 1166, 1642
SmoI CTYRAG 3 cut(s) 80, 1166, 1642
Sse9I AATT 5 cut(s) 643, 866, 1366, 1578, 1591
SseBI AGGCCT 1 cut(s) 1141
SsiI CCGC 5 cut(s) 9, 341, 753, 1297, 1391
SspDI GGCGCC 1 cut(s) 1066
SspI AATATT 2 cut(s) 254, 1873
SspMI CTAG 4 cut(s) 44, 1037, 1190, 1493
SstI GAGCTC 1 cut(s) 1414
StuI AGGCCT 1 cut(s) 1141
StyD4I CCNGG 5 cut(s) 148, 277, 907, 1029, 1741
StyI CCWWGG 2 cut(s) 43, 807
TaaI ACNGT 2 cut(s) 841, 1345
TaiI ACGT 4 cut(s) 214, 890, 1376, 1704
TaqI TCGA 7 cut(s) 321, 408, 848, 949, 1167, 1305, 1855
TasI AATT 5 cut(s) 643, 866, 1366, 1578, 1591
TatI WGTACW 2 cut(s) 84, 1866
TauI GCSGC 1 cut(s) 1394
TfiI GAWTC 1 cut(s) 862
Tru1I TTAA 6 cut(s) 62, 186, 738, 870, 897, 1875
Tru9I TTAA 6 cut(s) 62, 186, 738, 870, 897, 1875
TscAI CASTG 4 cut(s) 827, 1120, 1567, 1765
TseFI GTSAC 3 cut(s) 191, 1710, 1756
TseI GCWGC 4 cut(s) 338, 347, 1234, 1612
Tsp45I GTSAC 3 cut(s) 191, 1710, 1756
TspDTI ATGAA 4 cut(s) 373, 392, 478, 701
TspGWI ACGGA 1 cut(s) 444
TspRI CASTG 4 cut(s) 827, 1120, 1567, 1765
VneI GTGCAC 1 cut(s) 1196
VpaK11BI GGWCC 3 cut(s) 159, 1040, 1094
VspI ATTAAT 1 cut(s) 1875
XagI CCTNNNNNAGG 1 cut(s) 1146
XceI RCATGY 3 cut(s) 642, 1711, 1828
XhoI CTCGAG 1 cut(s) 1166
XmaJI CCTAGG 1 cut(s) 43
XspI CTAG 4 cut(s) 44, 1037, 1190, 1493
ZraI GACGTC 1 cut(s) 1374
ZrmI AGTACT 1 cut(s) 86
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.