pycom13g01620

MACPF domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr13
OG0014090
Physical Location & Seq
Forward (+)
1064344 .. 1068986
4643 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom13g01620.1

Sequence Viewer

Length: 1650 bp
ATGAGTGGTGACGATCATAGCATGATCGCGGAGAGGGCACTAAACAGCCTAGGCAAAGGATTTGATTTGACGTCAGATTTCCAACTGAAATACTGCAAGGGAGGCAAACAAAGATTGGTTGTGCTCAACGACACCGATAAAAGAGAACTCACAGTTCCTGGTTTCAGAACCATTCAGAACGTCTCCGTCGACATTAAATGTGACAAAGGCGATCGTACTCGTTACCAATCCGATATCCTCACCTTCAATCAGATGTCGGAGTTTTTTAACCAAGGGTCGAGTGTGCCAGGGAAAATCCCATCAGGGCTGTTCAACGCTATGTTTGGATTCGACAGCGGTTTGTGGGCAAAGGATGCAGCAAACATCAAGCACTTGGCTCTTGATGGCTACTTCATCATATTCTTCAACGTTCATATTGATAGATACCCTCTTGTTCTCGCCGAAGATGTCTGTGAGTCCGTTCCATCCACCTGGGATCCTCCTGCCCTTGCAAGTTTCTCCCCATCACACTCCAAATCCAAAGACCAAAAACACAAGGGTACTAGTGTGATATTCTATAAAAAAGGAGGCGATCCGATGGCCAGCAGCCACTACGAGTGGCTTCTCACAGCTCCATCAATGCCGGACGCAATTCAGTTTAGTTTCATTCCGATCACTTCTCTCCTCAAAGATGTGCCAGGCAAGGGTTTGCTGTCGCATGCCATCAACCTCTATCTTCGATACAAGCCTCCAATAGATGATCTGCAGTACTTTTTGGACTTTCAAACCCACAAACTTTGGGCTCCTGTTCTCAATGAGCTGGCTCTAGGCCCAGCCTCCAATAGGACGACTCAGTCCCCTGCAATCCACGTCAGCTTGATGGGTCCTAAACTATATGTAAACTCTGCGCAAGTTAGGGTTGCATTTAGGCCTGTCACGGGGATGCGCTTGTATCTTGAGGGCAGGAAAGCCAACAGGCTAGCCGTCCACCTCCAACATCTGTCAAACACACCATTCATGTTGCAAAACAAGATAGATGACACACCAACATGGCGAGGATCGGATGAAATTGCCGACGACCGCTACTTTGAAGCCATAAACCGGAAAAAGATTTCCCATGTGTGCACTGTACCGGTAAAATACGACCCCAAATGGATGTCCTCCAAGAAAGATGCGTCCTTCATAGTGTCCGGGGTCCAGCTTGTTGTAAAGAAGCATGACACAAAGAATGTCCTCCATCTTCGGCTCTTGTTCTCCAAAGTCTCAGATCATTTCGTTGTCCAATCAAATTGGACTGAACCACCGTCGGAACATTCCCAAAAGTCGTCATCGTCCGGTCTCTTCAGTGCCATAAGTACATCGATTTCGGGGAGTAATTGGTCGAGAGATAGAGTACTGCCCGATGATGATCGAGTGATTGTGGATTCGAGTGTGTTCCCGACAGGGCCTCCGGTGCCGCTGCAGTTACAAAAGTTTGTGAAGTACGTGGACATGTCACATCTGTGTAGGGGCCCACAAGACGGTCCAGGATATTGGTTGGTCACCGGAGCTAGGCTCAACTTAGTGAAGGGGAAGATAAGTTTGCAAGTAAAGTTCTCTTTGTTAAACTTATGTTCACCGTCACCACCAGTCTCCCTTCGAGATTTGATGTACAACGTTGTGGATTTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
MACPF

Protein Analysis

550

Amino Acids

61.41

Weight (kDa)

9.07

Isoelectric Point (pI)

38.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MACPF PF01823 169 - 238 6.7e-10 MAC/Perforin domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014090)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G14780
fragaria_vesca FvH4_4g33390
malus_domestica MD13G1019100.v1.1
prunus_persica Prupe.1G334800_v2.0.a1
pyrus_communis pycom13g01620 pycom16g01550
rosa_chinensis RchiOBHm_Chr4g0442651
rosa_laevigata RLG00000005994
rosa_multiflora Rmu_co8443405.1_g000001 Rmu_ssc0000204.1_g000031
rosa_roxburghii Rroxscaffold_5G00383460
rosa_rugosa Rorug04G0341900
rosa_samantha Rh4AG394400 Rh4BG407400 Rh4CG422800 Rh4DG401400
rosa_wichuraiana Rw4G034080

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 832
AatII GACGTC 1 cut(s) 74
Acc16I TGCGCA 1 cut(s) 888
AccB1I GGYRCC 1 cut(s) 1432
AccI GTMKAC 1 cut(s) 189
AccII CGCG 1 cut(s) 29
AciI CCGC 4 cut(s) 29, 336, 1060, 1436
AclI AACGTT 2 cut(s) 408, 1635
AclWI GGATC 4 cut(s) 470, 483, 566, 1045
AcoI YGGCCR 1 cut(s) 579
AcuI CTGAAG 1 cut(s) 1306
AcyI GRCGYC 1 cut(s) 71
AfaI GTAC 8 cut(s) 217, 541, 749, 1110, 1336, 1374, 1463, 1631
AfiI CCNNNNNNNGG 6 cut(s) 683, 822, 917, 1080, 1499, 1530
AflIII ACRYGT 1 cut(s) 1470
AgeI ACCGGT 1 cut(s) 1111
AgsI TTSAA 5 cut(s) 247, 313, 406, 764, 1070
AhlI ACTAGT 1 cut(s) 542
AjiI CACGTC 1 cut(s) 850
AjnI CCWGG 5 cut(s) 157, 286, 470, 676, 1504
AleI CACNNNNGTG 1 cut(s) 1480
AluBI AGCT 5 cut(s) 611, 799, 855, 1180, 1529
AluI AGCT 5 cut(s) 611, 799, 855, 1180, 1529
Alw21I GWGCWC 2 cut(s) 126, 1106
Alw26I GTCTC 4 cut(s) 187, 1246, 1322, 1615
Alw44I GTGCAC 1 cut(s) 1102
AlwI GGATC 4 cut(s) 470, 483, 566, 1045
AlwNI CAGNNNCTG 1 cut(s) 158
AoxI GGCC 5 cut(s) 579, 808, 908, 1424, 1489
ApaI GGGCCC 1 cut(s) 1493
ApaLI GTGCAC 1 cut(s) 1102
ApeKI GCWGC 3 cut(s) 356, 585, 1438
ArsI GACNNNNNNTTYG 2 cut(s) 1049, 1081
AsiGI ACCGGT 1 cut(s) 1111
AspA2I CCTAGG 1 cut(s) 49
AspLEI GCGC 2 cut(s) 889, 927
AspS9I GGNCC 7 cut(s) 809, 863, 1174, 1424, 1489, 1490, 1502
AsuC2I CCSGG 1 cut(s) 1171
AsuHPI GGTGA 5 cut(s) 20, 232, 1513, 1587, 1593
AsuNHI GCTAGC 1 cut(s) 958
AvaII GGWCC 3 cut(s) 863, 1174, 1502
AvrII CCTAGG 1 cut(s) 49
BaeGI GKGCMC 3 cut(s) 40, 1106, 1493
BaeI ACNNNNGTAYC 2 cut(s) 531, 564
BalI TGGCCA 1 cut(s) 581
BamHI GGATCC 1 cut(s) 475
BanI GGYRCC 1 cut(s) 1432
BanII GRGCYC 2 cut(s) 784, 1493
Bbv12I GWGCWC 2 cut(s) 126, 1106
BbvI GCAGC 3 cut(s) 368, 597, 1425
BccI CCATC 9 cut(s) 307, 377, 472, 511, 571, 622, 710, 853, 1224
BceAI ACGGC 1 cut(s) 947
BciT130I CCWGG 5 cut(s) 159, 288, 472, 678, 1506
BcnI CCSGG 1 cut(s) 1171
BcoDI GTCTC 4 cut(s) 187, 1246, 1322, 1615
BcuI ACTAGT 1 cut(s) 542
BfaI CTAG 5 cut(s) 50, 543, 806, 959, 1530
BfmI CTRYAG 2 cut(s) 743, 1439
BisI GCNGC 4 cut(s) 357, 586, 1436, 1439
BlnI CCTAGG 1 cut(s) 49
BlsI GCNGC 4 cut(s) 358, 587, 1437, 1440
BmcAI AGTACT 2 cut(s) 749, 1374
Bme1390I CCNGG 6 cut(s) 159, 288, 472, 678, 1171, 1506
Bme18I GGWCC 3 cut(s) 863, 1174, 1502
BmgBI CACGTC 1 cut(s) 850
BmgT120I GGNCC 7 cut(s) 809, 863, 1174, 1424, 1489, 1490, 1502
BmiI GGNNCC 7 cut(s) 477, 783, 864, 1175, 1434, 1490, 1491
BmrFI CCNGG 6 cut(s) 159, 288, 472, 678, 1171, 1506
BmsI GCATC 3 cut(s) 343, 912, 1141
BmtI GCTAGC 1 cut(s) 962
BplI GAGNNNNNCTC 2 cut(s) 1518, 1550
BpuEI CTTGAG 1 cut(s) 956
BpuMI CCSGG 1 cut(s) 1171
Bsa29I ATCGAT 1 cut(s) 1340
BsaAI YACGTR 1 cut(s) 1465
BsaBI GATNNNNATC 1 cut(s) 1386
BsaHI GRCGYC 1 cut(s) 71
BsaI GGTCTC 1 cut(s) 1322
BsaJI CCNNGG 5 cut(s) 49, 271, 287, 471, 1170
BsaWI WCCGGW 5 cut(s) 1080, 1111, 1313, 1429, 1523
BsaXI ACNNNNNCTCC 2 cut(s) 1411, 1441
Bsc4I CCNNNNNNNGG 6 cut(s) 683, 822, 917, 1080, 1499, 1530
Bse118I RCCGGY 1 cut(s) 1111
Bse1I ACTGG 1 cut(s) 1607
Bse8I GATNNNNATC 1 cut(s) 1386
BseBI CCWGG 5 cut(s) 159, 288, 472, 678, 1506
BseCI ATCGAT 1 cut(s) 1340
BseDI CCNNGG 5 cut(s) 49, 271, 287, 471, 1170
BseGI GGATG 5 cut(s) 358, 464, 927, 1048, 1140
BseJI GATNNNNATC 1 cut(s) 1386
BseLI CCNNNNNNNGG 6 cut(s) 683, 822, 917, 1080, 1499, 1530
BseMII CTCAG 2 cut(s) 845, 1257
BseNI ACTGG 1 cut(s) 1607
BseRI GAGGAG 1 cut(s) 653
BseSI GKGCMC 3 cut(s) 40, 1106, 1493
BseXI GCAGC 3 cut(s) 368, 597, 1425
BseYI CCCAGC 1 cut(s) 811
Bsh1236I CGCG 1 cut(s) 29
Bsh1285I CGRYCG 2 cut(s) 214, 1060
BshFI GGCC 5 cut(s) 581, 810, 910, 1426, 1491
BshNI GGYRCC 1 cut(s) 1432
BshTI ACCGGT 1 cut(s) 1111
BshVI ATCGAT 1 cut(s) 1340
BsiEI CGRYCG 2 cut(s) 214, 1060
BsiHKAI GWGCWC 2 cut(s) 126, 1106
BsiSI CCGG 7 cut(s) 623, 1081, 1112, 1170, 1314, 1430, 1524
BslFI GGGAC 1 cut(s) 820
BslI CCNNNNNNNGG 6 cut(s) 683, 822, 917, 1080, 1499, 1530
BsmAI GTCTC 4 cut(s) 187, 1246, 1322, 1615
BsmBI CGTCTC 1 cut(s) 187
BsmFI GGGAC 1 cut(s) 820
BsnI GGCC 5 cut(s) 581, 810, 910, 1426, 1491
Bso31I GGTCTC 1 cut(s) 1322
Bsp120I GGGCCC 1 cut(s) 1489
Bsp1286I GDGCHC 5 cut(s) 40, 126, 784, 1106, 1493
Bsp1407I TGTACA 1 cut(s) 1629
BspACI CCGC 4 cut(s) 29, 336, 1060, 1436
BspANI GGCC 5 cut(s) 581, 810, 910, 1426, 1491
BspCNI CTCAG 2 cut(s) 844, 1256
BspDI ATCGAT 1 cut(s) 1340
BspFNI CGCG 1 cut(s) 29
BspLI GGNNCC 7 cut(s) 477, 783, 864, 1175, 1434, 1490, 1491
BspMAI CTGCAG 2 cut(s) 747, 1443
BspOI GCTAGC 1 cut(s) 962
BspPI GGATC 4 cut(s) 470, 483, 566, 1045
BspT107I GGYRCC 1 cut(s) 1432
BspTNI GGTCTC 1 cut(s) 1322
BsrFI RCCGGY 1 cut(s) 1111
BsrGI TGTACA 1 cut(s) 1629
BsrI ACTGG 1 cut(s) 1607
BssAI RCCGGY 1 cut(s) 1111
BssECI CCNNGG 5 cut(s) 49, 271, 287, 471, 1170
BssNI GRCGYC 1 cut(s) 71
BssT1I CCWWGG 2 cut(s) 49, 271
Bst2UI CCWGG 5 cut(s) 159, 288, 472, 678, 1506
Bst4CI ACNGT 5 cut(s) 154, 1108, 1284, 1502, 1599
Bst6I CTCTTC 1 cut(s) 1325
BstACI GRCGYC 1 cut(s) 71
BstAPI GCANNNNNTGC 1 cut(s) 353
BstAUI TGTACA 1 cut(s) 1629
BstBAI YACGTR 1 cut(s) 1465
BstC8I GCNNGC 4 cut(s) 583, 699, 801, 960
BstDEI CTNAG 3 cut(s) 831, 1243, 1540
BstEII GGTNACC 1 cut(s) 1519
BstENI CCTNNNNNAGG 1 cut(s) 820
BstF5I GGATG 5 cut(s) 358, 464, 927, 1048, 1140
BstFNI CGCG 1 cut(s) 29
BstHHI GCGC 2 cut(s) 889, 927
BstMAI GTCTC 4 cut(s) 187, 1246, 1322, 1615
BstMCI CGRYCG 2 cut(s) 214, 1060
BstMWI GCNNNNNNNGC 4 cut(s) 35, 102, 353, 1432
BstNI CCWGG 5 cut(s) 159, 288, 472, 678, 1506
BstNSI RCATGY 2 cut(s) 701, 1474
BstPI GGTNACC 1 cut(s) 1519
BstSCI CCNGG 6 cut(s) 157, 286, 470, 676, 1169, 1504
BstSFI CTRYAG 2 cut(s) 743, 1439
BstSLI GKGCMC 3 cut(s) 40, 1106, 1493
BstUI CGCG 1 cut(s) 29
BstV1I GCAGC 3 cut(s) 368, 597, 1425
BstX2I RGATCY 1 cut(s) 475
BstXI CCANNNNNNTGG 2 cut(s) 471, 1512
BstYI RGATCY 1 cut(s) 475
Bsu15I ATCGAT 1 cut(s) 1340
BsuRI GGCC 5 cut(s) 581, 810, 910, 1426, 1491
BsuTUI ATCGAT 1 cut(s) 1340
BtrI CACGTC 1 cut(s) 850
BtsCI GGATG 5 cut(s) 358, 464, 927, 1048, 1140
BtsIMutI CAGTG 2 cut(s) 1104, 1330
Cac8I GCNNGC 4 cut(s) 583, 699, 801, 960
CaiI CAGNNNCTG 1 cut(s) 158
CfoI GCGC 2 cut(s) 889, 927
Cfr10I RCCGGY 1 cut(s) 1111
Cfr13I GGNCC 7 cut(s) 809, 863, 1174, 1424, 1489, 1490, 1502
ClaI ATCGAT 1 cut(s) 1340
CseI GACGC 2 cut(s) 635, 1143
Csp6I GTAC 8 cut(s) 216, 540, 748, 1109, 1335, 1373, 1462, 1630
CspAI ACCGGT 1 cut(s) 1111
CspCI CAANNNNNGTGG 2 cut(s) 758, 793
CviAII CATG 7 cut(s) 22, 698, 997, 1029, 1097, 1196, 1471
CviQI GTAC 8 cut(s) 216, 540, 748, 1109, 1335, 1373, 1462, 1630
DdeI CTNAG 3 cut(s) 831, 1243, 1540
DrdI GACNNNNNNGTC 1 cut(s) 832
DseDI GACNNNNNNGTC 1 cut(s) 832
EaeI YGGCCR 1 cut(s) 579
Eam1104I CTCTTC 1 cut(s) 1325
EarI CTCTTC 1 cut(s) 1325
Eco130I CCWWGG 2 cut(s) 49, 271
Eco147I AGGCCT 1 cut(s) 910
Eco24I GRGCYC 2 cut(s) 784, 1493
Eco31I GGTCTC 1 cut(s) 1322
Eco32I GATATC 1 cut(s) 235
Eco47I GGWCC 3 cut(s) 863, 1174, 1502
Eco57I CTGAAG 1 cut(s) 1306
Eco91I GGTNACC 1 cut(s) 1519
EcoNI CCTNNNNNAGG 1 cut(s) 820
EcoO109I RGGNCCY 3 cut(s) 863, 1424, 1489
EcoO65I GGTNACC 1 cut(s) 1519
EcoRII CCWGG 5 cut(s) 157, 286, 470, 676, 1504
EcoRV GATATC 1 cut(s) 235
EcoT14I CCWWGG 2 cut(s) 49, 271
EcoT38I GRGCYC 2 cut(s) 784, 1493
ErhI CCWWGG 2 cut(s) 49, 271
Esp3I CGTCTC 1 cut(s) 187
FaeI CATG 7 cut(s) 25, 701, 1000, 1032, 1100, 1199, 1474
FaqI GGGAC 1 cut(s) 820
FatI CATG 7 cut(s) 21, 697, 996, 1028, 1096, 1195, 1470
FblI GTMKAC 1 cut(s) 189
Fnu4HI GCNGC 4 cut(s) 357, 586, 1436, 1439
FokI GGATG 5 cut(s) 365, 451, 934, 1055, 1147
FriOI GRGCYC 2 cut(s) 784, 1493
Fsp4HI GCNGC 4 cut(s) 357, 586, 1436, 1439
FspBI CTAG 5 cut(s) 50, 543, 806, 959, 1530
FspI TGCGCA 1 cut(s) 888
GlaI GCGC 2 cut(s) 888, 926
GluI GCNGC 4 cut(s) 357, 586, 1436, 1439
GsaI CCCAGC 1 cut(s) 815
HaeIII GGCC 5 cut(s) 581, 810, 910, 1426, 1491
HapII CCGG 7 cut(s) 623, 1081, 1112, 1170, 1314, 1430, 1524
HgaI GACGC 2 cut(s) 635, 1143
HhaI GCGC 2 cut(s) 889, 927
Hin1I GRCGYC 1 cut(s) 71
Hin1II CATG 7 cut(s) 25, 701, 1000, 1032, 1100, 1199, 1474
Hin6I GCGC 2 cut(s) 887, 925
HinP1I GCGC 2 cut(s) 887, 925
HincII GTYRAC 1 cut(s) 190
HindII GTYRAC 1 cut(s) 190
HinfI GANTC 4 cut(s) 327, 455, 829, 1403
HpaII CCGG 7 cut(s) 623, 1081, 1112, 1170, 1314, 1430, 1524
HphI GGTGA 5 cut(s) 20, 232, 1513, 1587, 1593
Hpy166II GTNNAC 6 cut(s) 190, 880, 967, 1104, 1468, 1595
Hpy188III TCNNGA 5 cut(s) 380, 935, 1362, 1417, 1619
Hpy8I GTNNAC 6 cut(s) 190, 880, 967, 1104, 1468, 1595
Hpy99I CGWCG 3 cut(s) 191, 1058, 1288
HpyAV CCTTC 4 cut(s) 253, 1168, 1540, 1625
HpyCH4III ACNGT 5 cut(s) 154, 1108, 1284, 1502, 1599
HpyCH4IV ACGT 6 cut(s) 71, 180, 408, 849, 1464, 1635
HpyF10VI GCNNNNNNNGC 4 cut(s) 35, 102, 353, 1432
HpyF3I CTNAG 3 cut(s) 831, 1243, 1540
HpySE526I ACGT 6 cut(s) 71, 180, 408, 849, 1464, 1635
Hsp92I GRCGYC 1 cut(s) 71
Hsp92II CATG 7 cut(s) 25, 701, 1000, 1032, 1100, 1199, 1474
HspAI GCGC 2 cut(s) 887, 925
LmnI GCTCC 3 cut(s) 616, 787, 1526
Lsp1109I GCAGC 3 cut(s) 368, 597, 1425
LweI GCATC 3 cut(s) 343, 912, 1141
MaeI CTAG 5 cut(s) 50, 543, 806, 959, 1530
MaeII ACGT 6 cut(s) 71, 180, 408, 849, 1464, 1635
MaeIII GTNAC 8 cut(s) 8, 200, 221, 913, 1443, 1473, 1519, 1599
MboII GAAGA 6 cut(s) 394, 455, 707, 1211, 1312, 1564
MflI RGATCY 1 cut(s) 475
MhlI GDGCHC 5 cut(s) 40, 126, 784, 1106, 1493
MlsI TGGCCA 1 cut(s) 581
MluCI AATT 4 cut(s) 630, 1047, 1267, 1354
MluNI TGGCCA 1 cut(s) 581
MlyI GAGTC 2 cut(s) 464, 823
MmeI TCCRAC 4 cut(s) 106, 237, 997, 1266
Mox20I TGGCCA 1 cut(s) 581
MscI TGGCCA 1 cut(s) 581
MseI TTAA 3 cut(s) 195, 267, 1583
MslI CAYNNNNRTG 3 cut(s) 920, 1027, 1480
Msp20I TGGCCA 1 cut(s) 581
MspA1I CMGCKG 2 cut(s) 336, 1438
MspI CCGG 7 cut(s) 623, 1081, 1112, 1170, 1314, 1430, 1524
MspR9I CCNGG 6 cut(s) 159, 288, 472, 678, 1171, 1506
MvaI CCWGG 5 cut(s) 159, 288, 472, 678, 1506
MvnI CGCG 1 cut(s) 29
MwoI GCNNNNNNNGC 4 cut(s) 35, 102, 353, 1432
NciI CCSGG 1 cut(s) 1171
NheI GCTAGC 1 cut(s) 958
NlaIII CATG 7 cut(s) 25, 701, 1000, 1032, 1100, 1199, 1474
NlaIV GGNNCC 7 cut(s) 477, 783, 864, 1175, 1434, 1490, 1491
NmuCI GTSAC 6 cut(s) 8, 200, 913, 1473, 1519, 1599
NsbI TGCGCA 1 cut(s) 888
NspI RCATGY 2 cut(s) 701, 1474
OliI CACNNNNGTG 1 cut(s) 1480
PaeI GCATGC 1 cut(s) 701
PceI AGGCCT 1 cut(s) 910
PciI ACATGT 1 cut(s) 1470
PcsI WCGNNNNNNNCGW 1 cut(s) 186
PfeI GAWTC 2 cut(s) 327, 1403
PflFI GACNNNGTC 1 cut(s) 832
PfoI TCCNGGA 1 cut(s) 1504
PinAI ACCGGT 1 cut(s) 1111
PkrI GCNGC 4 cut(s) 358, 587, 1437, 1440
Ple19I CGATCG 1 cut(s) 214
PleI GAGTC 2 cut(s) 463, 823
PpsI GAGTC 2 cut(s) 463, 823
Ppu21I YACGTR 1 cut(s) 1465
PpuMI RGGWCCY 1 cut(s) 863
PscI ACATGT 1 cut(s) 1470
Psp1406I AACGTT 2 cut(s) 408, 1635
Psp5II RGGWCCY 1 cut(s) 863
Psp6I CCWGG 5 cut(s) 157, 286, 470, 676, 1504
PspEI GGTNACC 1 cut(s) 1519
PspFI CCCAGC 1 cut(s) 811
PspGI CCWGG 5 cut(s) 157, 286, 470, 676, 1504
PspN4I GGNNCC 7 cut(s) 477, 783, 864, 1175, 1434, 1490, 1491
PspOMI GGGCCC 1 cut(s) 1489
PspPI GGNCC 7 cut(s) 809, 863, 1174, 1424, 1489, 1490, 1502
PspPPI RGGWCCY 1 cut(s) 863
PstI CTGCAG 2 cut(s) 747, 1443
PstNI CAGNNNCTG 1 cut(s) 158
PsuI RGATCY 1 cut(s) 475
PsyI GACNNNGTC 1 cut(s) 832
PvuI CGATCG 1 cut(s) 214
RsaI GTAC 8 cut(s) 217, 541, 749, 1110, 1336, 1374, 1463, 1631
RsaNI GTAC 8 cut(s) 216, 540, 748, 1109, 1335, 1373, 1462, 1630
RseI CAYNNNNRTG 3 cut(s) 920, 1027, 1480
SalI GTCGAC 1 cut(s) 188
SaqAI TTAA 3 cut(s) 195, 267, 1583
SatI GCNGC 4 cut(s) 357, 586, 1436, 1439
Sau96I GGNCC 7 cut(s) 809, 863, 1174, 1424, 1489, 1490, 1502
ScaI AGTACT 2 cut(s) 749, 1374
SchI GAGTC 2 cut(s) 464, 823
ScrFI CCNGG 6 cut(s) 159, 288, 472, 678, 1171, 1506
SduI GDGCHC 5 cut(s) 40, 126, 784, 1106, 1493
SfaNI GCATC 3 cut(s) 343, 912, 1141
SfcI CTRYAG 2 cut(s) 743, 1439
SinI GGWCC 3 cut(s) 863, 1174, 1502
SmiMI CAYNNNNRTG 3 cut(s) 920, 1027, 1480
SmlI CTYRAG 1 cut(s) 935
SmoI CTYRAG 1 cut(s) 935
SpeI ACTAGT 1 cut(s) 542
SphI GCATGC 1 cut(s) 701
Sse9I AATT 4 cut(s) 630, 1047, 1267, 1354
SseBI AGGCCT 1 cut(s) 910
SsiI CCGC 4 cut(s) 29, 336, 1060, 1436
SspMI CTAG 5 cut(s) 50, 543, 806, 959, 1530
StuI AGGCCT 1 cut(s) 910
StyD4I CCNGG 6 cut(s) 157, 286, 470, 676, 1169, 1504
StyI CCWWGG 2 cut(s) 49, 271
TaaI ACNGT 5 cut(s) 154, 1108, 1284, 1502, 1599
TaiI ACGT 6 cut(s) 74, 183, 411, 852, 1467, 1638
TaqI TCGA 9 cut(s) 189, 278, 330, 718, 1340, 1361, 1390, 1406, 1618
TasI AATT 4 cut(s) 630, 1047, 1267, 1354
TatI WGTACW 4 cut(s) 747, 1334, 1372, 1629
TauI GCSGC 1 cut(s) 1438
TfiI GAWTC 2 cut(s) 327, 1403
Tru1I TTAA 3 cut(s) 195, 267, 1583
Tru9I TTAA 3 cut(s) 195, 267, 1583
TscAI CASTG 2 cut(s) 1111, 1330
TseFI GTSAC 6 cut(s) 8, 200, 913, 1473, 1519, 1599
TseI GCWGC 3 cut(s) 356, 585, 1438
Tsp45I GTSAC 6 cut(s) 8, 200, 913, 1473, 1519, 1599
TspDTI ATGAA 6 cut(s) 382, 401, 634, 985, 1059, 1150
TspGWI ACGGA 2 cut(s) 175, 448
TspRI CASTG 2 cut(s) 1111, 1330
Tth111I GACNNNGTC 1 cut(s) 832
VneI GTGCAC 1 cut(s) 1102
VpaK11BI GGWCC 3 cut(s) 863, 1174, 1502
XagI CCTNNNNNAGG 1 cut(s) 820
XceI RCATGY 2 cut(s) 701, 1474
XmaJI CCTAGG 1 cut(s) 49
XmiI GTMKAC 1 cut(s) 189
XspI CTAG 5 cut(s) 50, 543, 806, 959, 1530
ZraI GACGTC 1 cut(s) 72
ZrmI AGTACT 2 cut(s) 749, 1374
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.