Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0012032

Physical Location & Seq

Genomic Coordinates Forward (+)

31840920 .. 31843878

Gene Structure 2959 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G337900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1548 bp

ATGATTATCTCTGTATTTTCTTTTTATCTGTTTTGGCGTTCTCTATCCGACCTTCTACCCTCCGTAGCACCTCTCTTGTCCAATTCGATCTTGTCCTCCCATCTACTACTTCAATTTAAAACTAGCCTTCCTCTCTCTCTCTCTCTTTTGCATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATACATGGCAAGAAAGCAAGGAGAAGTGATGTGGCCAAGACTAGTGGCAAACAAGATTCTACGAAAGCCATTGGGAAGCAACAACTTTGTGACAGATTTTCCAGGCAACGACGGTCCGGATGGATTAGTGCTGGAAGCACCAAGTTTTGATCAACCGTCTTCCAACTCTACGTCCACCATCTTCAATCATCACAAGGACACAAACACACACAAGTACAAGGTTTTTGTTAGTACATGGAATGTTGGTGGGGTGGAACCACAACAAGATATGAACATCAAGGATTGGATTGACACATCCTGTGACATCTATGTTTTCGGGTTTCAAGAAATTGTTCCTTTGAAAGCCTCCAATGTTCTGGGGTCTGAGAATAGTAGCATCTGCATGAAATGGAATTCCTTGATCAGAGAAGCTTTGAACAAGAAAACACACTACTACTCCCAAGACAATTTGAAGCACGACAAACATGATCATGATGGAAACCCAAATATTATCGAAAGCAGCAATAATCCACGGGAATTCCACTGTATCATAAGTAAGCAAATGGTGGGGATATTAATATCAGTTTGGGTTCGAAGTAATATTCGTCCCTTTATTCGGCATCCAAATGTCTCTTGCGTTGGCTGTGGCATCATGGGATGCCTTGGAAATAAGGGTTCTGTCTCAGTCAGATTTCGGTTGCATGAAACAAGTTTCTGCTTTGTGTGCACTCATCTAGCTTCAGGAAGCAGAGAAGGAGATGAGAAACTGAGAAATTCTAACGTCGCCGATATATTGTCCCGAACAAGTTTTCCTAGAGGCCCTTTGCTTGATTTGCCACGAAAGATCCTAGATCACGATCGAGTAATTTTCCTGGGAGATTTGAATTATAGAATTGCCCTTCCAGAAGCAACGACGCGATCATTAGTGGAGAGGAGAGAATGGAATGCCTTACTAAAACACGATCAGTTGATGATGGAGCTGAAAGAGGGTCAAGTACTTGAAGGTTGGCATGAAGGGGCGATTCAATTTGCTCCCACTTACAAATATTGTCCAAATTCTAATGTATACTATGGATGTCGTCCTGGAAACAGAGGTGAAAAGAGGCGCGCTCCTGCATGGTGTGATCGGATAATTTGGTGCGGAAAAGGATTGAAGCAACATGAATATGGTAGAGGTATATCAAAATTGTCAGACCACAGGCCTGTGAAGGCAATATTTACAGCTGAAGTTGGGGTTTTGCGAACATTGAAAGGATACCACAGCTTTTTTCTATCAGAAAGATTAGACAAAATTTCAAGCCAGTTACAAGTATCCTCCGCCGATGGTTTTCTATGTAAAGGTAGCACCAAATCAAGAAGCTTCAAAATTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004439 GO:0006629 GO:0006644 GO:0006650 GO:0006793 GO:0006796 GO:0006950 GO:0006970 GO:0008150 GO:0008152 GO:0009628 GO:0009651 GO:0009987 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0019222 GO:0019637 GO:0030100 GO:0030258 GO:0031323 GO:0032879 GO:0033554 GO:0034485 GO:0034593 GO:0034594 GO:0034595 GO:0042578 GO:0044237 GO:0044238 GO:0044255 GO:0046486 GO:0046488 GO:0046839 GO:0046856 GO:0048259 GO:0050789 GO:0050794 GO:0050896 GO:0051049 GO:0051128 GO:0051716 GO:0052866 GO:0060627 GO:0065007 GO:0071214 GO:0071470 GO:0071472 GO:0071704 GO:0104004 GO:0106019 GO:2000369 GO:2000377

KEGG Pathways

Metabolic & Signaling

ko00562 ko01100 ko04070 map00562 map01100 map04070

Pfam Domains

Protein Families

Exo_endo_phos

Protein Analysis

516

Amino Acids

58.16

Weight (kDa)

9.2

Isoelectric Point (pI)

40.63

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012032)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G01900 AT2G01900 AT2G01900
fragaria_vesca	FvH4_4g26100
malus_domestica	MD13G1015800.v1.1 MD16G1013300.v1.1
prunus_persica	Prupe.1G337900_v2.0.a1 Prupe.1G337900_v2.0.a1
pyrus_communis	pycom16g01240
rosa_chinensis	RchiOBHm_Chr4g0433671
rosa_laevigata	RLG00000006740
rosa_multiflora	Rmu_sc0000312.1_g000022
rosa_roxburghii	Rroxscaffold_5G00375110
rosa_rugosa	Rorug04G0270000
rosa_samantha	Rh4AG325000 Rh4BG332700 Rh4CG348000 Rh4DG329400
rosa_wichuraiana	Rw4G028140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	1242
AccII	CGCG	2 cut(s)	1093, 1284
AccIII	TCCGGA	1 cut(s)	313
AciI	CCGC	2 cut(s)	1317, 1494
AclWI	GGATC	1 cut(s)	1015
AcoI	YGGCCR	1 cut(s)	230
AcsI	RAATTY	6 cut(s)	589, 713, 949, 1231, 1467, 1542
AcuI	CTGAAG	2 cut(s)	900, 1422
AfaI	GTAC	3 cut(s)	413, 430, 1173
AfiI	CCNNNNNNNGG	1 cut(s)	792
AhlI	ACTAGT	1 cut(s)	238
AjnI	CCWGG	3 cut(s)	298, 1047, 1258
AloI	GAACNNNNNNTCC	2 cut(s)	970, 1002
AluBI	AGCT	6 cut(s)	608, 914, 1156, 1400, 1440, 1536
AluI	AGCT	6 cut(s)	608, 914, 1156, 1400, 1440, 1536
Alw21I	GWGCWC	1 cut(s)	905
Alw26I	GTCTC	2 cut(s)	811, 862
Alw44I	GTGCAC	1 cut(s)	901
AlwI	GGATC	1 cut(s)	1015
Aor13HI	TCCGGA	1 cut(s)	313
AoxI	GGCC	3 cut(s)	230, 994, 1376
ApaLI	GTGCAC	1 cut(s)	901
ApeKI	GCWGC	1 cut(s)	696
ApoI	RAATTY	6 cut(s)	589, 713, 949, 1231, 1467, 1542
AseI	ATTAAT	1 cut(s)	752
Asp700I	GAANNNNTTC	1 cut(s)	528
AspLEI	GCGC	2 cut(s)	1284, 1286
AspS9I	GGNCC	2 cut(s)	311, 995
AsuHPI	GGTGA	1 cut(s)	1283
AsuII	TTCGAA	1 cut(s)	769
AvaII	GGWCC	1 cut(s)	311
BaeGI	GKGCMC	1 cut(s)	905
BalI	TGGCCA	1 cut(s)	232
BbsI	GAAGAC	1 cut(s)	348
Bbv12I	GWGCWC	1 cut(s)	905
BbvI	GCAGC	1 cut(s)	708
BccI	CCATC	6 cut(s)	108, 311, 383, 665, 1144, 1493
BciT130I	CCWGG	3 cut(s)	300, 1049, 1260
BciVI	GTATCC	2 cut(s)	1424, 1498
BclI	TGATCA	3 cut(s)	346, 597, 664
BcoDI	GTCTC	2 cut(s)	811, 862
BcuI	ACTAGT	1 cut(s)	238
BfaI	CTAG	5 cut(s)	123, 239, 911, 990, 1025
BfuI	GTATCC	2 cut(s)	1424, 1498
BisI	GCNGC	1 cut(s)	697
BlsI	GCNGC	1 cut(s)	698
BmcAI	AGTACT	1 cut(s)	1173
Bme1390I	CCNGG	3 cut(s)	300, 1049, 1260
Bme18I	GGWCC	1 cut(s)	311
BmgT120I	GGNCC	2 cut(s)	311, 995
BmiI	GGNNCC	1 cut(s)	453
BmrFI	CCNGG	3 cut(s)	300, 1049, 1260
BmsI	GCATC	5 cut(s)	160, 582, 805, 824, 834
BpiI	GAAGAC	1 cut(s)	348
BplI	GAGNNNNNCTC	2 cut(s)	1270, 1302
Bpu14I	TTCGAA	1 cut(s)	769
BsaBI	GATNNNNATC	1 cut(s)	1032
BsaJI	CCNNGG	3 cut(s)	707, 838, 1048
BsaWI	WCCGGW	1 cut(s)	313
BsaXI	ACNNNNNCTCC	2 cut(s)	617, 647
Bsc4I	CCNNNNNNNGG	1 cut(s)	792
Bse1I	ACTGG	1 cut(s)	1477
Bse8I	GATNNNNATC	1 cut(s)	1032
BseAI	TCCGGA	1 cut(s)	313
BseBI	CCWGG	3 cut(s)	300, 1049, 1260
BseDI	CCNNGG	3 cut(s)	707, 838, 1048
BseGI	GGATG	5 cut(s)	322, 491, 796, 839, 1256
BseJI	GATNNNNATC	1 cut(s)	1032
BseLI	CCNNNNNNNGG	1 cut(s)	792
BseMII	CTCAG	3 cut(s)	552, 873, 935
BseNI	ACTGG	1 cut(s)	1477
BsePI	GCGCGC	1 cut(s)	1282
BseRI	GAGGAG	1 cut(s)	1123
BseSI	GKGCMC	1 cut(s)	905
BseXI	GCAGC	1 cut(s)	708
Bsh1236I	CGCG	2 cut(s)	1093, 1284
Bsh1285I	CGRYCG	1 cut(s)	1036
BshFI	GGCC	3 cut(s)	232, 996, 1378
BsiEI	CGRYCG	1 cut(s)	1036
BsiHKAI	GWGCWC	1 cut(s)	905
BsiSI	CCGG	1 cut(s)	314
BslFI	GGGAC	2 cut(s)	768, 958
BslI	CCNNNNNNNGG	1 cut(s)	792
BsmAI	GTCTC	2 cut(s)	811, 862
BsmFI	GGGAC	2 cut(s)	768, 958
BsmI	GAATGC	1 cut(s)	1126
BsnI	GGCC	3 cut(s)	232, 996, 1378
Bsp119I	TTCGAA	1 cut(s)	769
Bsp1286I	GDGCHC	1 cut(s)	905
Bsp13I	TCCGGA	1 cut(s)	313
BspACI	CCGC	2 cut(s)	1317, 1494
BspANI	GGCC	3 cut(s)	232, 996, 1378
BspCNI	CTCAG	3 cut(s)	553, 872, 936
BspEI	TCCGGA	1 cut(s)	313
BspFNI	CGCG	2 cut(s)	1093, 1284
BspHI	TCATGA	1 cut(s)	667
BspLI	GGNNCC	1 cut(s)	453
BspPI	GGATC	1 cut(s)	1015
BspT104I	TTCGAA	1 cut(s)	769
BsrI	ACTGG	1 cut(s)	1477
BssECI	CCNNGG	3 cut(s)	707, 838, 1048
BssHII	GCGCGC	1 cut(s)	1282
BssNAI	GTATAC	1 cut(s)	1243
BssT1I	CCWWGG	1 cut(s)	838
Bst1107I	GTATAC	1 cut(s)	1243
Bst2UI	CCWGG	3 cut(s)	300, 1049, 1260
Bst4CI	ACNGT	3 cut(s)	311, 354, 722
BstBI	TTCGAA	1 cut(s)	769
BstC8I	GCNNGC	1 cut(s)	1284
BstDEI	CTNAG	3 cut(s)	561, 859, 944
BstDSI	CCRYGG	1 cut(s)	707
BstF5I	GGATG	5 cut(s)	322, 491, 796, 839, 1256
BstFNI	CGCG	2 cut(s)	1093, 1284
BstHHI	GCGC	2 cut(s)	1284, 1286
BstMAI	GTCTC	2 cut(s)	811, 862
BstMCI	CGRYCG	1 cut(s)	1036
BstMWI	GCNNNNNNNGC	2 cut(s)	900, 1009
BstNI	CCWGG	3 cut(s)	300, 1049, 1260
BstSCI	CCNGG	3 cut(s)	298, 1047, 1258
BstSLI	GKGCMC	1 cut(s)	905
BstUI	CGCG	2 cut(s)	1093, 1284
BstV1I	GCAGC	1 cut(s)	708
BstV2I	GAAGAC	1 cut(s)	348
BstX2I	RGATCY	1 cut(s)	1020
BstXI	CCANNNNNNTGG	1 cut(s)	553
BstYI	RGATCY	1 cut(s)	1020
BstZ17I	GTATAC	1 cut(s)	1243
BsuI	GTATCC	2 cut(s)	1424, 1498
BsuRI	GGCC	3 cut(s)	232, 996, 1378
BtgI	CCRYGG	1 cut(s)	707
BtsCI	GGATG	5 cut(s)	322, 491, 796, 839, 1256
BtsIMutI	CAGTG	1 cut(s)	718
Cac8I	GCNNGC	1 cut(s)	1284
CciI	TCATGA	1 cut(s)	667
CfoI	GCGC	2 cut(s)	1284, 1286
Cfr13I	GGNCC	2 cut(s)	311, 995
CpoI	CGGWCCG	1 cut(s)	311
CseI	GACGC	1 cut(s)	1099
Csp6I	GTAC	3 cut(s)	412, 429, 1172
CspCI	CAANNNNNGTGG	2 cut(s)	222, 257
CspI	CGGWCCG	1 cut(s)	311
CviQI	GTAC	3 cut(s)	412, 429, 1172
DdeI	CTNAG	3 cut(s)	561, 859, 944
DraI	TTTAAA	1 cut(s)	118
EaeI	YGGCCR	1 cut(s)	230
EciI	GGCGGA	1 cut(s)	1483
Eco130I	CCWWGG	1 cut(s)	838
Eco147I	AGGCCT	1 cut(s)	1378
Eco47I	GGWCC	1 cut(s)	311
Eco57I	CTGAAG	2 cut(s)	900, 1422
EcoO109I	RGGNCCY	1 cut(s)	995
EcoRI	GAATTC	2 cut(s)	589, 713
EcoRII	CCWGG	3 cut(s)	298, 1047, 1258
EcoT14I	CCWWGG	1 cut(s)	838
ErhI	CCWWGG	1 cut(s)	838
FaqI	GGGAC	2 cut(s)	768, 958
FbaI	TGATCA	3 cut(s)	346, 597, 664
FblI	GTMKAC	1 cut(s)	1242
Fnu4HI	GCNGC	1 cut(s)	697
FokI	GGATG	5 cut(s)	329, 478, 783, 846, 1263
Fsp4HI	GCNGC	1 cut(s)	697
FspBI	CTAG	5 cut(s)	123, 239, 911, 990, 1025
GlaI	GCGC	2 cut(s)	1283, 1285
GluI	GCNGC	1 cut(s)	697
HaeIII	GGCC	3 cut(s)	232, 996, 1378
HapII	CCGG	1 cut(s)	314
HgaI	GACGC	1 cut(s)	1099
HhaI	GCGC	2 cut(s)	1284, 1286
Hin6I	GCGC	2 cut(s)	1282, 1284
HinP1I	GCGC	2 cut(s)	1282, 1284
HindIII	AAGCTT	2 cut(s)	606, 1534
HinfI	GANTC	2 cut(s)	253, 1198
HpaII	CCGG	1 cut(s)	314
HphI	GGTGA	1 cut(s)	1283
Hpy166II	GTNNAC	3 cut(s)	372, 903, 1243
Hpy188I	TCNGA	7 cut(s)	49, 562, 602, 866, 1305, 1369, 1453
Hpy188III	TCNNGA	8 cut(s)	314, 521, 668, 918, 975, 1031, 1079, 1530
Hpy8I	GTNNAC	3 cut(s)	372, 903, 1243
Hpy99I	CGWCG	3 cut(s)	311, 962, 1093
HpyAV	CCTTC	7 cut(s)	62, 137, 923, 1085, 1172, 1184, 1378
HpyCH4III	ACNGT	3 cut(s)	311, 354, 722
HpyCH4IV	ACGT	2 cut(s)	368, 957
HpyCH4V	TGCA	5 cut(s)	151, 579, 877, 903, 1292
HpyF10VI	GCNNNNNNNGC	2 cut(s)	900, 1009
HpyF3I	CTNAG	3 cut(s)	561, 859, 944
HpySE526I	ACGT	2 cut(s)	368, 957
HspAI	GCGC	2 cut(s)	1282, 1284
Kpn2I	TCCGGA	1 cut(s)	313
Ksp22I	TGATCA	3 cut(s)	346, 597, 664
LmnI	GCTCC	3 cut(s)	1153, 1213, 1291
Lsp1109I	GCAGC	1 cut(s)	708
LweI	GCATC	5 cut(s)	160, 582, 805, 824, 834
MaeI	CTAG	5 cut(s)	123, 239, 911, 990, 1025
MaeII	ACGT	2 cut(s)	368, 957
MaeIII	GTNAC	3 cut(s)	286, 497, 1479
MboII	GAAGA	2 cut(s)	348, 370
MflI	RGATCY	1 cut(s)	1020
MhlI	GDGCHC	1 cut(s)	905
MlsI	TGGCCA	1 cut(s)	232
MluNI	TGGCCA	1 cut(s)	232
MmeI	TCCRAC	2 cut(s)	72, 384
Mox20I	TGGCCA	1 cut(s)	232
MroI	TCCGGA	1 cut(s)	313
MroXI	GAANNNNTTC	1 cut(s)	528
MscI	TGGCCA	1 cut(s)	232
MseI	TTAA	2 cut(s)	117, 752
MslI	CAYNNNNRTG	4 cut(s)	578, 666, 801, 1341
Msp20I	TGGCCA	1 cut(s)	232
MspA1I	CMGCKG	1 cut(s)	1400
MspI	CCGG	1 cut(s)	314
MspR9I	CCNGG	3 cut(s)	300, 1049, 1260
Mva1269I	GAATGC	1 cut(s)	1126
MvaI	CCWGG	3 cut(s)	300, 1049, 1260
MvnI	CGCG	2 cut(s)	1093, 1284
MwoI	GCNNNNNNNGC	2 cut(s)	900, 1009
NlaIV	GGNNCC	1 cut(s)	453
NmuCI	GTSAC	2 cut(s)	286, 497
NspV	TTCGAA	1 cut(s)	769
PagI	TCATGA	1 cut(s)	667
PauI	GCGCGC	1 cut(s)	1282
PceI	AGGCCT	1 cut(s)	1378
PctI	GAATGC	1 cut(s)	1126
PdmI	GAANNNNTTC	1 cut(s)	528
PfeI	GAWTC	2 cut(s)	253, 1198
PfoI	TCCNGGA	1 cut(s)	1258
PkrI	GCNGC	1 cut(s)	698
Ple19I	CGATCG	1 cut(s)	1036
PshBI	ATTAAT	1 cut(s)	752
Psp6I	CCWGG	3 cut(s)	298, 1047, 1258
PspGI	CCWGG	3 cut(s)	298, 1047, 1258
PspN4I	GGNNCC	1 cut(s)	453
PspPI	GGNCC	2 cut(s)	311, 995
PsuI	RGATCY	1 cut(s)	1020
PteI	GCGCGC	1 cut(s)	1282
PvuI	CGATCG	1 cut(s)	1036
PvuII	CAGCTG	1 cut(s)	1400
RsaI	GTAC	3 cut(s)	413, 430, 1173
RsaNI	GTAC	3 cut(s)	412, 429, 1172
RseI	CAYNNNNRTG	4 cut(s)	578, 666, 801, 1341
Rsr2I	CGGWCCG	1 cut(s)	311
RsrII	CGGWCCG	1 cut(s)	311
SaqAI	TTAA	2 cut(s)	117, 752
SatI	GCNGC	1 cut(s)	697
Sau96I	GGNCC	2 cut(s)	311, 995
ScaI	AGTACT	1 cut(s)	1173
ScrFI	CCNGG	3 cut(s)	300, 1049, 1260
SduI	GDGCHC	1 cut(s)	905
SfaNI	GCATC	5 cut(s)	160, 582, 805, 824, 834
SfuI	TTCGAA	1 cut(s)	769
SinI	GGWCC	1 cut(s)	311
SmiMI	CAYNNNNRTG	4 cut(s)	578, 666, 801, 1341
SpeI	ACTAGT	1 cut(s)	238
SseBI	AGGCCT	1 cut(s)	1378
SsiI	CCGC	2 cut(s)	1317, 1494
SspI	AATATT	4 cut(s)	685, 778, 1223, 1392
SspMI	CTAG	5 cut(s)	123, 239, 911, 990, 1025
StuI	AGGCCT	1 cut(s)	1378
StyD4I	CCNGG	3 cut(s)	298, 1047, 1258
StyI	CCWWGG	1 cut(s)	838
TaaI	ACNGT	3 cut(s)	311, 354, 722
TaiI	ACGT	2 cut(s)	371, 960
TaqI	TCGA	4 cut(s)	86, 690, 769, 1036
TatI	WGTACW	3 cut(s)	411, 428, 1171
TfiI	GAWTC	2 cut(s)	253, 1198
Tru1I	TTAA	2 cut(s)	117, 752
Tru9I	TTAA	2 cut(s)	117, 752
TscAI	CASTG	1 cut(s)	725
TseFI	GTSAC	2 cut(s)	286, 497
TseI	GCWGC	1 cut(s)	696
Tsp45I	GTSAC	2 cut(s)	286, 497
TspDTI	ATGAA	5 cut(s)	482, 596, 894, 1203, 1353
TspGWI	ACGGA	1 cut(s)	52
TspRI	CASTG	1 cut(s)	725
VneI	GTGCAC	1 cut(s)	901
VpaK11BI	GGWCC	1 cut(s)	311
VspI	ATTAAT	1 cut(s)	752
XapI	RAATTY	6 cut(s)	589, 713, 949, 1231, 1467, 1542
XmiI	GTMKAC	1 cut(s)	1242
XmnI	GAANNNNTTC	1 cut(s)	528
XspI	CTAG	5 cut(s)	123, 239, 911, 990, 1025
ZrmI	AGTACT	1 cut(s)	1173

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.