RchiOBHm_Chr4g0433671

Type I inositol 1,4,5-trisphosphate 5-phosphatase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
Physical Location & Seq
Forward (+)
57714450 .. 57716900
2451 bp
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UTR
Exon/CDS
Intron
PRQ40214

Sequence Viewer

Length: 1323 bp
ATGTGGCCTAGATTAGTGGCGAACAAAATTCTGAAGAAGCGATTGGGAAGCAACAACTTTGTAGCAGATTTCCCAAGCAACTCGGAAGACTCCACCTTGCAGCTGGAAACACCAAGTTTTGATCCAGAGAAACCGTTATCTTTATGCCCGACGACACCAGCTCCAAAAATCTTGAATCACCACAAGCACACACACAATTACAATACATGGAATGTTGGTGGAGTTGAACCACGAGATGATATGAACATGGCGGATTGGATTACTGACACATCCTGTGACATCTATGTTTTTGGGTTTCAAGAAATTGTTCCTCTCAAAGCCTCAAATGTTCTGGGATCTGAGAATAGTATGATCTGCATGAAGTGGAACTCCTTCATTAGAGAAACTTTGAACAAGAAAATAAACCACCCGGGAGACAAGAATAAGGAAAAAAATGGAAAGTCAACCATTGTGGAAAGCAGCACCAATTCAGAATCACAGGATTACTTCCAGTGTATTATAAGTAAGCAAATGGTGGGAATACTAATAACAGTCTGGGTTCGAAGAAATCTTCGTCCTTTGATTCGGAATCCGAGTGTTTCATGTGTTGGCTGTGGCATCATGGGTTGCCTCGGCAATAAGGGTTCAGTGTCAGTTAGGTTTCAACTGCATGAAACAAGCTTCTGCTTCGTGTGCTGTCATCTAGCTTCAGGGGGAAGACAAGGAGATGAGAAACTCAGAAACTCGAACGTAGCTGAAATCTTGAACAGAACAAGTTTCCCTAGAGGTCCATTGCTTGATTTGCCACGAAAGATCCCAGACCACCAACGAGTAATCTTCTTGGGAGATTTGAATTACAGAATTTCCCTTCCAGAATCAACCACACGGTCATTAGTGGATAGCAGAGATTGGAATGCCTTACTGAAGAGCGATCAGCTGAGTATGGAGCTCAATAATGGTCAAGTATTTGAAGGTTGGCTTGAAGGAAGTATCAAATTTGCCCCGACTTACAAATATTTTCCAGATTCTGATACATATTATGGATGTCCTCCTCCTGCAAGGAAAGGTGAAAAGAGGCGTGCTCCTGCATGGTGTGATCGGATAATTTGGTATGGAAAAGGGTTGAAGCAACATGTATACGACCGAGGTGAATCAAAATTGTCTGACCACAGGCCAGTGAAGTCAATATTTACCGCCCAAGTTGAAGTTCTACCATCGCTTATGAGAGGATACCAAAGCTTTTTTCTTTCGGACAGGTTTGACAAAATTTCAAGCCAGTTTGACGTACCCTCCACCGACGATCGATTTCTATGTCATCGCAGATCATCAAGCTTCAAAGCTTGA

Protein Analysis

440

Amino Acids

50.05

Weight (kDa)

8.99

Isoelectric Point (pI)

43.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Exo_endo_phos2 PF22669 69 - 388 3.1e-69 Endonuclease/Exonuclease/phosphatase family 2
Exo_endo_phos PF03372 69 - 383 4.6e-06 Endonuclease/Exonuclease/phosphatase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0012032)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 500
AccI GTMKAC 1 cut(s) 1116
AciI CCGC 2 cut(s) 251, 1173
AclWI GGATC 3 cut(s) 116, 343, 787
AcsI RAATTY 4 cut(s) 27, 840, 974, 1245
AcuI CTGAAG 3 cut(s) 53, 672, 923
AfaI GTAC 1 cut(s) 1266
AflIII ACRYGT 1 cut(s) 1111
AjuI GAANNNNNNNTTGG 6 cut(s) 26, 58, 1170, 1202, 1206, 1238
Alw21I GWGCWC 2 cut(s) 930, 1063
Alw26I GTCTC 1 cut(s) 408
AlwI GGATC 3 cut(s) 116, 343, 787
AlwNI CAGNNNCTG 1 cut(s) 1007
Ama87I CYCGRG 1 cut(s) 409
AoxI GGCC 2 cut(s) 5, 1151
ApeKI GCWGC 2 cut(s) 100, 459
ApoI RAATTY 4 cut(s) 27, 840, 974, 1245
Asp700I GAANNNNTTC 2 cut(s) 306, 371
AspS9I GGNCC 1 cut(s) 767
AsuC2I CCSGG 2 cut(s) 410, 411
AsuHPI GGTGA 3 cut(s) 170, 1058, 1139
AsuII TTCGAA 1 cut(s) 541
AvaI CYCGRG 1 cut(s) 409
AvaII GGWCC 1 cut(s) 767
BanII GRGCYC 1 cut(s) 930
BauI CACGAG 1 cut(s) 231
BbsI GAAGAC 2 cut(s) 93, 703
Bbv12I GWGCWC 2 cut(s) 930, 1063
BbvI GCAGC 2 cut(s) 112, 471
BccI CCATC 1 cut(s) 1201
BciVI GTATCC 1 cut(s) 1202
BcnI CCSGG 2 cut(s) 410, 411
BcoDI GTCTC 1 cut(s) 408
BfaI CTAG 3 cut(s) 9, 683, 762
BfuI GTATCC 1 cut(s) 1202
BisI GCNGC 2 cut(s) 101, 460
BlsI GCNGC 2 cut(s) 102, 461
Bme1390I CCNGG 2 cut(s) 410, 411
Bme18I GGWCC 1 cut(s) 767
BmeT110I CYCGRG 1 cut(s) 409
BmgT120I GGNCC 1 cut(s) 767
BmrFI CCNGG 2 cut(s) 410, 411
BmsI GCATC 1 cut(s) 606
BpiI GAAGAC 2 cut(s) 93, 703
BplI GAGNNNNNCTC 2 cut(s) 1045, 1077
Bpu14I TTCGAA 1 cut(s) 541
BpuMI CCSGG 2 cut(s) 410, 411
Bsa29I ATCGAT 1 cut(s) 1282
BsaJI CCNNGG 3 cut(s) 409, 610, 1123
BsaXI ACNNNNNCTCC 4 cut(s) 145, 175, 1253, 1283
Bse1I ACTGG 3 cut(s) 490, 1154, 1255
Bse3DI GCAATG 1 cut(s) 770
BseCI ATCGAT 1 cut(s) 1282
BseDI CCNNGG 3 cut(s) 409, 610, 1123
BseGI GGATG 2 cut(s) 269, 1028
BseMI GCAATG 1 cut(s) 770
BseMII CTCAG 3 cut(s) 330, 730, 908
BseNI ACTGG 3 cut(s) 490, 1154, 1255
BseRI GAGGAG 1 cut(s) 1020
BseXI GCAGC 2 cut(s) 112, 471
Bsh1285I CGRYCG 2 cut(s) 1123, 1282
BshFI GGCC 2 cut(s) 7, 1153
BshVI ATCGAT 1 cut(s) 1282
BsiEI CGRYCG 2 cut(s) 1123, 1282
BsiHKAI GWGCWC 2 cut(s) 930, 1063
BsiHKCI CYCGRG 1 cut(s) 409
BsiSI CCGG 1 cut(s) 410
BsmAI GTCTC 1 cut(s) 408
BsmI GAATGC 1 cut(s) 898
BsnI GGCC 2 cut(s) 7, 1153
BsoBI CYCGRG 1 cut(s) 409
Bsp119I TTCGAA 1 cut(s) 541
Bsp1286I GDGCHC 2 cut(s) 930, 1063
Bsp143I GATC 8 cut(s) 121, 335, 351, 792, 910, 1075, 1279, 1301
BspACI CCGC 2 cut(s) 251, 1173
BspANI GGCC 2 cut(s) 7, 1153
BspCNI CTCAG 3 cut(s) 331, 729, 909
BspDI ATCGAT 1 cut(s) 1282
BspPI GGATC 3 cut(s) 116, 343, 787
BspQI GCTCTTC 1 cut(s) 899
BspT104I TTCGAA 1 cut(s) 541
BsrDI GCAATG 1 cut(s) 770
BsrI ACTGG 3 cut(s) 490, 1154, 1255
BssECI CCNNGG 3 cut(s) 409, 610, 1123
BssMI GATC 8 cut(s) 121, 335, 351, 792, 910, 1075, 1279, 1301
BssNAI GTATAC 1 cut(s) 1117
BssSI CACGAG 1 cut(s) 231
Bst1107I GTATAC 1 cut(s) 1117
Bst2BI CACGAG 1 cut(s) 231
Bst4CI ACNGT 3 cut(s) 135, 532, 867
Bst6I CTCTTC 1 cut(s) 899
BstBI TTCGAA 1 cut(s) 541
BstC8I GCNNGC 1 cut(s) 1059
BstDEI CTNAG 3 cut(s) 339, 716, 917
BstF5I GGATG 2 cut(s) 269, 1028
BstKTI GATC 8 cut(s) 124, 338, 354, 795, 913, 1078, 1282, 1304
BstMAI GTCTC 1 cut(s) 408
BstMBI GATC 8 cut(s) 121, 335, 351, 792, 910, 1075, 1279, 1301
BstMCI CGRYCG 2 cut(s) 1123, 1282
BstMWI GCNNNNNNNGC 2 cut(s) 672, 781
BstNSI RCATGY 1 cut(s) 1115
BstSCI CCNGG 2 cut(s) 408, 409
BstV1I GCAGC 2 cut(s) 112, 471
BstV2I GAAGAC 2 cut(s) 93, 703
BstX2I RGATCY 2 cut(s) 335, 792
BstYI RGATCY 2 cut(s) 335, 792
BstZ17I GTATAC 1 cut(s) 1117
Bsu15I ATCGAT 1 cut(s) 1282
BsuI GTATCC 1 cut(s) 1202
BsuRI GGCC 2 cut(s) 7, 1153
BsuTUI ATCGAT 1 cut(s) 1282
BtgZI GCGATG 2 cut(s) 1179, 1280
BtsCI GGATG 2 cut(s) 269, 1028
BtsIMutI CAGTG 3 cut(s) 497, 633, 1161
Cac8I GCNNGC 1 cut(s) 1059
CaiI CAGNNNCTG 1 cut(s) 1007
Cfr13I GGNCC 1 cut(s) 767
Cfr9I CCCGGG 1 cut(s) 409
ClaI ATCGAT 1 cut(s) 1282
Csp6I GTAC 1 cut(s) 1265
CspCI CAANNNNNGTGG 2 cut(s) 432, 467
CviAII CATG 8 cut(s) 207, 247, 358, 582, 601, 650, 1068, 1112
CviQI GTAC 1 cut(s) 1265
DdeI CTNAG 3 cut(s) 339, 716, 917
DpnI GATC 8 cut(s) 123, 337, 353, 794, 912, 1077, 1281, 1303
DpnII GATC 8 cut(s) 121, 335, 351, 792, 910, 1075, 1279, 1301
Eam1104I CTCTTC 1 cut(s) 899
EarI CTCTTC 1 cut(s) 899
EciI GGCGGA 1 cut(s) 266
Ecl136II GAGCTC 1 cut(s) 928
Eco24I GRGCYC 1 cut(s) 930
Eco47I GGWCC 1 cut(s) 767
Eco53kI GAGCTC 1 cut(s) 928
Eco57I CTGAAG 3 cut(s) 53, 672, 923
Eco88I CYCGRG 1 cut(s) 409
EcoICRI GAGCTC 1 cut(s) 928
EcoT38I GRGCYC 1 cut(s) 930
FaeI CATG 8 cut(s) 210, 250, 361, 585, 604, 653, 1071, 1115
FalI AAGNNNNNCTT 2 cut(s) 942, 974
FatI CATG 8 cut(s) 206, 246, 357, 581, 600, 649, 1067, 1111
FblI GTMKAC 1 cut(s) 1116
Fnu4HI GCNGC 2 cut(s) 101, 460
FokI GGATG 2 cut(s) 256, 1035
FriOI GRGCYC 1 cut(s) 930
Fsp4HI GCNGC 2 cut(s) 101, 460
FspBI CTAG 3 cut(s) 9, 683, 762
GluI GCNGC 2 cut(s) 101, 460
HaeIII GGCC 2 cut(s) 7, 1153
HapII CCGG 1 cut(s) 410
Hin1II CATG 8 cut(s) 210, 250, 361, 585, 604, 653, 1071, 1115
HincII GTYRAC 1 cut(s) 444
HindII GTYRAC 1 cut(s) 444
HindIII AAGCTT 4 cut(s) 658, 1216, 1309, 1317
HinfI GANTC 8 cut(s) 89, 175, 473, 562, 568, 854, 1004, 1130
HpaII CCGG 1 cut(s) 410
HphI GGTGA 3 cut(s) 170, 1058, 1139
Hpy166II GTNNAC 2 cut(s) 444, 1117
Hpy188III TCNNGA 6 cut(s) 125, 172, 299, 742, 851, 1001
Hpy8I GTNNAC 2 cut(s) 444, 1117
Hpy99I CGWCG 2 cut(s) 154, 1280
HpyAV CCTTC 4 cut(s) 382, 857, 944, 956
HpyCH4III ACNGT 3 cut(s) 135, 532, 867
HpyCH4IV ACGT 2 cut(s) 729, 1263
HpyCH4V TGCA 5 cut(s) 100, 357, 649, 1037, 1067
HpyF10VI GCNNNNNNNGC 2 cut(s) 672, 781
HpyF3I CTNAG 3 cut(s) 339, 716, 917
HpySE526I ACGT 2 cut(s) 729, 1263
Hsp92II CATG 8 cut(s) 210, 250, 361, 585, 604, 653, 1071, 1115
Kzo9I GATC 8 cut(s) 121, 335, 351, 792, 910, 1075, 1279, 1301
LguI GCTCTTC 1 cut(s) 899
LmnI GCTCC 3 cut(s) 166, 925, 1066
Lsp1109I GCAGC 2 cut(s) 112, 471
LweI GCATC 1 cut(s) 606
MaeI CTAG 3 cut(s) 9, 683, 762
MaeII ACGT 2 cut(s) 729, 1263
MaeIII GTNAC 1 cut(s) 275
MalI GATC 8 cut(s) 123, 337, 353, 794, 912, 1077, 1281, 1303
MboI GATC 8 cut(s) 121, 335, 351, 792, 910, 1075, 1279, 1301
MboII GAAGA 7 cut(s) 46, 98, 542, 555, 708, 808, 916
MflI RGATCY 2 cut(s) 335, 792
MhlI GDGCHC 2 cut(s) 930, 1063
MlyI GAGTC 1 cut(s) 83
MroXI GAANNNNTTC 2 cut(s) 306, 371
MspA1I CMGCKG 2 cut(s) 103, 916
MspI CCGG 1 cut(s) 410
MspR9I CCNGG 2 cut(s) 410, 411
Mva1269I GAATGC 1 cut(s) 898
MwoI GCNNNNNNNGC 2 cut(s) 672, 781
NciI CCSGG 2 cut(s) 410, 411
NdeII GATC 8 cut(s) 121, 335, 351, 792, 910, 1075, 1279, 1301
NlaIII CATG 8 cut(s) 210, 250, 361, 585, 604, 653, 1071, 1115
NmeAIII GCCGAG 1 cut(s) 591
NmuCI GTSAC 1 cut(s) 275
NspI RCATGY 1 cut(s) 1115
NspV TTCGAA 1 cut(s) 541
PciI ACATGT 1 cut(s) 1111
PciSI GCTCTTC 1 cut(s) 899
PctI GAATGC 1 cut(s) 898
PdmI GAANNNNTTC 2 cut(s) 306, 371
PfeI GAWTC 7 cut(s) 175, 473, 562, 568, 854, 1004, 1130
PkrI GCNGC 2 cut(s) 102, 461
Ple19I CGATCG 1 cut(s) 1282
PleI GAGTC 1 cut(s) 83
PpsI GAGTC 1 cut(s) 83
PscI ACATGT 1 cut(s) 1111
PsiI TTATAA 1 cut(s) 500
Psp124BI GAGCTC 1 cut(s) 930
PspPI GGNCC 1 cut(s) 767
PstNI CAGNNNCTG 1 cut(s) 1007
PsuI RGATCY 2 cut(s) 335, 792
PvuI CGATCG 1 cut(s) 1282
PvuII CAGCTG 2 cut(s) 103, 916
RsaI GTAC 1 cut(s) 1266
RsaNI GTAC 1 cut(s) 1265
SacI GAGCTC 1 cut(s) 930
SapI GCTCTTC 1 cut(s) 899
SatI GCNGC 2 cut(s) 101, 460
Sau3AI GATC 8 cut(s) 121, 335, 351, 792, 910, 1075, 1279, 1301
Sau96I GGNCC 1 cut(s) 767
SchI GAGTC 1 cut(s) 83
ScrFI CCNGG 2 cut(s) 410, 411
SduI GDGCHC 2 cut(s) 930, 1063
SfaNI GCATC 1 cut(s) 606
SfuI TTCGAA 1 cut(s) 541
SinI GGWCC 1 cut(s) 767
SmaI CCCGGG 1 cut(s) 411
SsiI CCGC 2 cut(s) 251, 1173
SspI AATATT 2 cut(s) 995, 1167
SspMI CTAG 3 cut(s) 9, 683, 762
SstI GAGCTC 1 cut(s) 930
StyD4I CCNGG 2 cut(s) 408, 409
TaaI ACNGT 3 cut(s) 135, 532, 867
TaiI ACGT 2 cut(s) 732, 1266
TaqI TCGA 3 cut(s) 541, 725, 1282
TaqII GACCGA 1 cut(s) 1137
TfiI GAWTC 7 cut(s) 175, 473, 562, 568, 854, 1004, 1130
TscAI CASTG 3 cut(s) 497, 633, 1161
TseFI GTSAC 1 cut(s) 275
TseI GCWGC 2 cut(s) 100, 459
Tsp45I GTSAC 1 cut(s) 275
TspDTI ATGAA 5 cut(s) 257, 364, 374, 570, 666
TspMI CCCGGG 1 cut(s) 409
TspRI CASTG 3 cut(s) 497, 633, 1161
VpaK11BI GGWCC 1 cut(s) 767
XapI RAATTY 4 cut(s) 27, 840, 974, 1245
XceI RCATGY 1 cut(s) 1115
XcmI CCANNNNNNNNNTGG 1 cut(s) 100
XmaI CCCGGG 1 cut(s) 409
XmiI GTMKAC 1 cut(s) 1116
XmnI GAANNNNTTC 2 cut(s) 306, 371
XspI CTAG 3 cut(s) 9, 683, 762
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.