Prupe.1G341100_v2.0.a1

ZINC FINGER protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Reverse (-)
32054649 .. 32059083
4435 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G341100.1

Sequence Viewer

Length: 1824 bp
ATGGCGGCTGCTTCTTCGTCAATACCGTTTTTCGGAAGCACTAGTAGCAGAGAAGAAACCCAAAGCCAGATGACGTCCACGCTACAACAGCATTCCTCCGCAACGCCTTCCTCTAATACTACAGCCGCAGCCGCAGCCGCAGCCCCACCCCCTCAAAAGAAAAGGAGAAATCAACCTGGAAATCCAAATCCAGATGCAGAGGTCATCGCACTATCTCCCAAGACGCTAATGGCAACAAACAGGTTCATATGTGAGGTGTGCAACAAAGGGTTCCAAAGGGAGCAAAACCTACAGCTCCACAGAAGAGGACACAACCTGCCGTGGAAGCTCAAGCAGAAGACTACAAAAGAACCCAGACGCAAGGTCTACCTGTGCCCCGAACCCACATGCGTCCACCATGACCCCTCTCGAGCTCTCGGTGACCTCACCGGCATCAAAAAACACTTCTCTAGAAAACATGGCGAGAAGAAATGGAAGTGCGAGAAGTGCTCCAAGAGGTACGCCGTGCAATCGGATTGGAAGGCCCATTCTAAGACTTGCGGCACTAGGGAATACAGATGCGATTGTGGCACTCTCTTCTCAAGGCGCGACAGCTTTATCACGCATAGGGCATTCTGCGATGCACTGGCTCAGGAGAGTGCAAGGCATCCTTCAAGCTTAAACACCATGGGTGGTCAACTATATGGAAACAACCACATGAGCTTAGGCCTATCCCAAATTCCCTCACTTCAAAATCAGACCCACCTGCCCAACAACATGTTGAGGTTAGGAAATGCTGGTGGTGCAAAATATGAGCATCTAATCACACCATCAAATCCTTCTTCCTTCGGATCACAAGCCATGCCTAATTCCTCCAATTTCTTCATGAGGGATATTGCTAACCAGCAAGGCTTTCAGGATCAGCACCAATTTCCCAGCAAGGCAGCATTGCATGGGCTAATGCAACTTCCTGATCTCCAAAGCAACGGTAACAACAACAACTCACCCTCATCAACTAGTGCTGCAAATCTCTTCAACCTGAGCTTCTTTTCTAACAACAGTACCAGCAGCAGCTTGACTCCACCTGATCATCAGTTTAGTGATGGCAATGGCGGTGGCCAAGGGTTTAGCATGGGTGCTGGTGATCATCACACTATGGGGTCGGCTACTCTACCATCTCTCTATGGGAATTCCATGCAACATGAAAGCAACATTGCTTCACATATGTCTGCCACTGCTTTGCTTCAGAAAGCTGCCCAAATGGGTTCAACTACAAGCACCGAAAGCTCGTCTCTGCTACGAGGGTTAGGCAATTCATCAACAAGAGCAGCTAAATCCGGTAGGCAACTAGTTGCGGCACCCTCTACCGTTGGTGTCAGTTTTAGTGGCGATCATCACAGTGGTGGCGAACAGCAACACTTAAGATCATCACAGCAGGTGGACAATGAAAACCATCTTCAAGGTTTGATGAACTCTCTTGCCAGTGGGGCCTCTTCTGTTTTTGGAGGTGGAGGAGTGCATGGACAGGATCATAACAGCTTTGGTGGGTTTAGTAGTGGCAGTACTGGTACTAGGGTTAATGCAATGGATCAACAGCATAATAACACAAATTATGATGAGGCTAAGTTGCATCAAAATTTGGGTGTAAATTTTGGAGGGTCTGATAAATTGACCTTGGATTTTCTGGGAGTTGGAGGGATGGTACAAAACATGAGTGGTGGCCATGGATACTCACAACGAGATCATCATCAGCAACATCATGGCATAAATATGATCGGCACTTTAGACCCAGATTTGAAGTCAGCGCAGACACGTCAACCCTTTGGAGGCACTGCAATGCAATGA

Protein Analysis

608

Amino Acids

65.3

Weight (kDa)

9.28

Isoelectric Point (pI)

45.6

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 753, 1405
AatII GACGTC 1 cut(s) 77
Acc36I ACCTGC 3 cut(s) 324, 753, 1405
AccB1I GGYRCC 1 cut(s) 1336
AccI GTMKAC 1 cut(s) 366
AccII CGCG 1 cut(s) 588
AciI CCGC 8 cut(s) 5, 99, 126, 132, 138, 540, 1092, 1334
AclWI GGATC 4 cut(s) 838, 906, 1515, 1575
AcoI YGGCCR 2 cut(s) 1096, 1699
AcsI RAATTY 4 cut(s) 717, 1168, 1615, 1627
AcuI CTGAAG 1 cut(s) 1208
AcyI GRCGYC 1 cut(s) 74
AfaI GTAC 5 cut(s) 500, 1042, 1543, 1549, 1683
AfiI CCNNNNNNNGG 2 cut(s) 32, 1805
AflII CTTAAG 1 cut(s) 1399
AflIII ACRYGT 2 cut(s) 756, 1790
AgsI TTSAA 6 cut(s) 654, 731, 1015, 1248, 1439, 1777
AhdI GACNNNNNGTC 1 cut(s) 362
AhlI ACTAGT 3 cut(s) 41, 995, 1327
AjiI CACGTC 1 cut(s) 1793
AjnI CCWGG 1 cut(s) 175
AleI CACNNNNGTG 1 cut(s) 1380
Alw21I GWGCWC 2 cut(s) 415, 491
Alw26I GTCTC 1 cut(s) 1275
AlwI GGATC 4 cut(s) 838, 906, 1515, 1575
Ama87I CYCGRG 1 cut(s) 408
AoxI GGCC 5 cut(s) 522, 706, 1096, 1467, 1699
ApoI RAATTY 4 cut(s) 717, 1168, 1615, 1627
AspLEI GCGC 2 cut(s) 588, 1786
AspS9I GGNCC 2 cut(s) 523, 1467
AsuHPI GGTGA 4 cut(s) 418, 431, 975, 1133
AvaI CYCGRG 1 cut(s) 408
BaeGI GKGCMC 1 cut(s) 377
BaeI ACNNNNGTAYC 4 cut(s) 1024, 1057, 1539, 1572
BalI TGGCCA 2 cut(s) 1098, 1701
BanI GGYRCC 1 cut(s) 1336
BanII GRGCYC 1 cut(s) 415
BbsI GAAGAC 1 cut(s) 344
Bbv12I GWGCWC 2 cut(s) 415, 491
BbvI GCAGC 9 cut(s) 140, 146, 152, 935, 988, 1059, 1062, 1219, 1319
BccI CCATC 5 cut(s) 817, 1076, 1162, 1440, 1672
BceAI ACGGC 2 cut(s) 304, 488
BciT130I CCWGG 1 cut(s) 177
BciVI GTATCC 1 cut(s) 1700
BclI TGATCA 2 cut(s) 1066, 1123
BcoDI GTCTC 1 cut(s) 1275
BcuI ACTAGT 3 cut(s) 41, 995, 1327
BfaI CTAG 6 cut(s) 42, 450, 546, 996, 1328, 1551
BfmI CTRYAG 2 cut(s) 120, 290
BfrI CTTAAG 1 cut(s) 1399
BfuAI ACCTGC 3 cut(s) 324, 753, 1405
BfuI GTATCC 1 cut(s) 1700
BglI GCCNNNNNGGC 1 cut(s) 1466
BmcAI AGTACT 1 cut(s) 1543
Bme1390I CCNGG 1 cut(s) 177
BmeRI GACNNNNNGTC 1 cut(s) 362
BmeT110I CYCGRG 1 cut(s) 408
BmgBI CACGTC 1 cut(s) 1793
BmgT120I GGNCC 2 cut(s) 523, 1467
BmiI GGNNCC 3 cut(s) 272, 1338, 1468
BmrFI CCNGG 1 cut(s) 177
BmsI GCATC 7 cut(s) 184, 441, 548, 610, 655, 805, 1618
BpiI GAAGAC 1 cut(s) 344
BplI GAGNNNNNCTC 2 cut(s) 473, 505
Bpu10I CCTNAGC 3 cut(s) 630, 703, 1019
BpuEI CTTGAG 2 cut(s) 314, 565
BsaBI GATNNNNATC 1 cut(s) 1725
BsaHI GRCGYC 1 cut(s) 74
BsaJI CCNNGG 5 cut(s) 320, 666, 1099, 1653, 1702
BsaWI WCCGGW 1 cut(s) 1316
BsaXI ACNNNNNCTCC 2 cut(s) 1665, 1695
Bsc4I CCNNNNNNNGG 2 cut(s) 32, 1805
Bse118I RCCGGY 1 cut(s) 428
Bse1I ACTGG 3 cut(s) 630, 1461, 1549
Bse3DI GCAATG 5 cut(s) 926, 1093, 1191, 1569, 1821
Bse8I GATNNNNATC 1 cut(s) 1725
BseBI CCWGG 1 cut(s) 177
BseDI CCNNGG 5 cut(s) 320, 666, 1099, 1653, 1702
BseGI GGATG 2 cut(s) 646, 1683
BseJI GATNNNNATC 1 cut(s) 1725
BseLI CCNNNNNNNGG 2 cut(s) 32, 1805
BseMI GCAATG 5 cut(s) 926, 1093, 1191, 1569, 1821
BseMII CTCAG 2 cut(s) 644, 1010
BseNI ACTGG 3 cut(s) 630, 1461, 1549
BseRI GAGGAG 1 cut(s) 1506
BseSI GKGCMC 1 cut(s) 377
BseXI GCAGC 9 cut(s) 140, 146, 152, 935, 988, 1059, 1062, 1219, 1319
BseYI CCCAGC 1 cut(s) 914
Bsh1236I CGCG 1 cut(s) 588
BshFI GGCC 5 cut(s) 524, 708, 1098, 1469, 1701
BshNI GGYRCC 1 cut(s) 1336
BsiHKAI GWGCWC 2 cut(s) 415, 491
BsiHKCI CYCGRG 1 cut(s) 408
BsiSI CCGG 2 cut(s) 429, 1317
BslI CCNNNNNNNGG 2 cut(s) 32, 1805
BsmAI GTCTC 1 cut(s) 1275
BsmBI CGTCTC 1 cut(s) 1275
BsmI GAATGC 2 cut(s) 91, 611
BsnI GGCC 5 cut(s) 524, 708, 1098, 1469, 1701
BsoBI CYCGRG 1 cut(s) 408
Bsp1286I GDGCHC 3 cut(s) 377, 415, 491
Bsp19I CCATGG 2 cut(s) 666, 1702
BspACI CCGC 8 cut(s) 5, 99, 126, 132, 138, 540, 1092, 1334
BspANI GGCC 5 cut(s) 524, 708, 1098, 1469, 1701
BspCNI CTCAG 2 cut(s) 643, 1011
BspFNI CGCG 1 cut(s) 588
BspHI TCATGA 1 cut(s) 864
BspLI GGNNCC 3 cut(s) 272, 1338, 1468
BspMI ACCTGC 3 cut(s) 324, 753, 1405
BspPI GGATC 4 cut(s) 838, 906, 1515, 1575
BspT107I GGYRCC 1 cut(s) 1336
BspTI CTTAAG 1 cut(s) 1399
BsrDI GCAATG 5 cut(s) 926, 1093, 1191, 1569, 1821
BsrFI RCCGGY 1 cut(s) 428
BsrI ACTGG 3 cut(s) 630, 1461, 1549
BssAI RCCGGY 1 cut(s) 428
BssECI CCNNGG 5 cut(s) 320, 666, 1099, 1653, 1702
BssNI GRCGYC 1 cut(s) 74
BssT1I CCWWGG 4 cut(s) 666, 1099, 1653, 1702
Bst2UI CCWGG 1 cut(s) 177
Bst4CI ACNGT 5 cut(s) 27, 968, 1040, 1348, 1379
Bst6I CTCTTC 4 cut(s) 298, 581, 1016, 1477
BstACI GRCGYC 1 cut(s) 74
BstAFI CTTAAG 1 cut(s) 1399
BstDEI CTNAG 5 cut(s) 531, 630, 703, 1019, 1602
BstDSI CCRYGG 3 cut(s) 320, 666, 1702
BstEII GGTNACC 1 cut(s) 419
BstF5I GGATG 2 cut(s) 646, 1683
BstFNI CGCG 1 cut(s) 588
BstHHI GCGC 2 cut(s) 588, 1786
BstMAI GTCTC 1 cut(s) 1275
BstNI CCWGG 1 cut(s) 177
BstNSI RCATGY 2 cut(s) 390, 760
BstPI GGTNACC 1 cut(s) 419
BstSCI CCNGG 1 cut(s) 175
BstSFI CTRYAG 2 cut(s) 120, 290
BstSLI GKGCMC 1 cut(s) 377
BstUI CGCG 1 cut(s) 588
BstV1I GCAGC 9 cut(s) 140, 146, 152, 935, 988, 1059, 1062, 1219, 1319
BstV2I GAAGAC 1 cut(s) 344
BsuI GTATCC 1 cut(s) 1700
BsuRI GGCC 5 cut(s) 524, 708, 1098, 1469, 1701
BtgI CCRYGG 3 cut(s) 320, 666, 1702
BtgZI GCGATG 2 cut(s) 190, 633
BtrI CACGTC 1 cut(s) 1793
BtsCI GGATG 2 cut(s) 646, 1683
BtsI GCAGTG 2 cut(s) 1212, 1809
BtsIMutI CAGTG 5 cut(s) 623, 1212, 1384, 1468, 1809
BveI ACCTGC 3 cut(s) 324, 753, 1405
CciI TCATGA 1 cut(s) 864
CfoI GCGC 2 cut(s) 588, 1786
Cfr10I RCCGGY 1 cut(s) 428
Cfr13I GGNCC 2 cut(s) 523, 1467
CseI GACGC 3 cut(s) 232, 366, 379
Csp6I GTAC 5 cut(s) 499, 1041, 1542, 1548, 1682
CspCI CAANNNNNGTGG 2 cut(s) 1075, 1110
CviQI GTAC 5 cut(s) 499, 1041, 1542, 1548, 1682
DdeI CTNAG 5 cut(s) 531, 630, 703, 1019, 1602
DriI GACNNNNNGTC 1 cut(s) 362
EaeI YGGCCR 2 cut(s) 1096, 1699
Eam1104I CTCTTC 4 cut(s) 298, 581, 1016, 1477
Eam1105I GACNNNNNGTC 1 cut(s) 362
EarI CTCTTC 4 cut(s) 298, 581, 1016, 1477
Ecl136II GAGCTC 1 cut(s) 413
Eco130I CCWWGG 4 cut(s) 666, 1099, 1653, 1702
Eco147I AGGCCT 1 cut(s) 708
Eco24I GRGCYC 1 cut(s) 415
Eco53kI GAGCTC 1 cut(s) 413
Eco57I CTGAAG 1 cut(s) 1208
Eco88I CYCGRG 1 cut(s) 408
Eco91I GGTNACC 1 cut(s) 419
EcoICRI GAGCTC 1 cut(s) 413
EcoO109I RGGNCCY 1 cut(s) 1467
EcoO65I GGTNACC 1 cut(s) 419
EcoRI GAATTC 1 cut(s) 1168
EcoRII CCWGG 1 cut(s) 175
EcoT14I CCWWGG 4 cut(s) 666, 1099, 1653, 1702
EcoT38I GRGCYC 1 cut(s) 415
ErhI CCWWGG 4 cut(s) 666, 1099, 1653, 1702
Esp3I CGTCTC 1 cut(s) 1275
FalI AAGNNNNNCTT 2 cut(s) 634, 666
FauNDI CATATG 2 cut(s) 248, 1203
FbaI TGATCA 2 cut(s) 1066, 1123
FblI GTMKAC 1 cut(s) 366
FokI GGATG 2 cut(s) 633, 1690
FriOI GRGCYC 1 cut(s) 415
FspBI CTAG 6 cut(s) 42, 450, 546, 996, 1328, 1551
GlaI GCGC 2 cut(s) 587, 1785
GsaI CCCAGC 1 cut(s) 918
HaeIII GGCC 5 cut(s) 524, 708, 1098, 1469, 1701
HapII CCGG 2 cut(s) 429, 1317
HgaI GACGC 3 cut(s) 232, 366, 379
HhaI GCGC 2 cut(s) 588, 1786
Hin1I GRCGYC 1 cut(s) 74
Hin6I GCGC 2 cut(s) 586, 1784
HinP1I GCGC 2 cut(s) 586, 1784
HincII GTYRAC 2 cut(s) 677, 1796
HindII GTYRAC 2 cut(s) 677, 1796
HindIII AAGCTT 1 cut(s) 655
HinfI GANTC 1 cut(s) 1057
HpaII CCGG 2 cut(s) 429, 1317
HphI GGTGA 4 cut(s) 418, 431, 975, 1133
Hpy166II GTNNAC 6 cut(s) 78, 367, 394, 677, 1420, 1796
Hpy188I TCNGA 6 cut(s) 35, 514, 738, 830, 1227, 1642
Hpy188III TCNNGA 7 cut(s) 191, 408, 450, 632, 865, 896, 950
Hpy8I GTNNAC 6 cut(s) 78, 367, 394, 677, 1420, 1796
HpyAV CCTTC 5 cut(s) 117, 514, 660, 828, 835
HpyCH4III ACNGT 5 cut(s) 27, 968, 1040, 1348, 1379
HpyCH4IV ACGT 2 cut(s) 74, 1792
HpyF3I CTNAG 5 cut(s) 531, 630, 703, 1019, 1602
HpySE526I ACGT 2 cut(s) 74, 1792
Hsp92I GRCGYC 1 cut(s) 74
HspAI GCGC 2 cut(s) 586, 1784
Ksp22I TGATCA 2 cut(s) 1066, 1123
LmnI GCTCC 3 cut(s) 280, 300, 494
Lsp1109I GCAGC 9 cut(s) 140, 146, 152, 935, 988, 1059, 1062, 1219, 1319
LweI GCATC 7 cut(s) 184, 441, 548, 610, 655, 805, 1618
MaeI CTAG 6 cut(s) 42, 450, 546, 996, 1328, 1551
MaeII ACGT 2 cut(s) 74, 1792
MaeIII GTNAC 2 cut(s) 419, 968
MhlI GDGCHC 3 cut(s) 377, 415, 491
MlsI TGGCCA 2 cut(s) 1098, 1701
MluNI TGGCCA 2 cut(s) 1098, 1701
MlyI GAGTC 1 cut(s) 1051
MmeI TCCRAC 1 cut(s) 1651
Mox20I TGGCCA 2 cut(s) 1098, 1701
MscI TGGCCA 2 cut(s) 1098, 1701
MseI TTAA 3 cut(s) 659, 1400, 1557
MslI CAYNNNNRTG 4 cut(s) 1377, 1380, 1748, 1814
Msp20I TGGCCA 2 cut(s) 1098, 1701
MspCI CTTAAG 1 cut(s) 1399
MspI CCGG 2 cut(s) 429, 1317
MspR9I CCNGG 1 cut(s) 177
Mva1269I GAATGC 2 cut(s) 91, 611
MvaI CCWGG 1 cut(s) 177
MvnI CGCG 1 cut(s) 588
NcoI CCATGG 2 cut(s) 666, 1702
NdeI CATATG 2 cut(s) 248, 1203
NlaIV GGNNCC 3 cut(s) 272, 1338, 1468
NmuCI GTSAC 1 cut(s) 419
NspI RCATGY 2 cut(s) 390, 760
OliI CACNNNNGTG 1 cut(s) 1380
PaeR7I CTCGAG 1 cut(s) 408
PagI TCATGA 1 cut(s) 864
PaqCI CACCTGC 2 cut(s) 753, 1405
PceI AGGCCT 1 cut(s) 708
PciI ACATGT 1 cut(s) 756
PcsI WCGNNNNNNNCGW 1 cut(s) 23
PctI GAATGC 2 cut(s) 91, 611
PleI GAGTC 1 cut(s) 1051
PpsI GAGTC 1 cut(s) 1051
PscI ACATGT 1 cut(s) 756
Psp124BI GAGCTC 1 cut(s) 415
Psp6I CCWGG 1 cut(s) 175
PspEI GGTNACC 1 cut(s) 419
PspFI CCCAGC 1 cut(s) 914
PspGI CCWGG 1 cut(s) 175
PspN4I GGNNCC 3 cut(s) 272, 1338, 1468
PspPI GGNCC 2 cut(s) 523, 1467
RsaI GTAC 5 cut(s) 500, 1042, 1543, 1549, 1683
RsaNI GTAC 5 cut(s) 499, 1041, 1542, 1548, 1682
RseI CAYNNNNRTG 4 cut(s) 1377, 1380, 1748, 1814
SacI GAGCTC 1 cut(s) 415
SaqAI TTAA 3 cut(s) 659, 1400, 1557
Sau96I GGNCC 2 cut(s) 523, 1467
ScaI AGTACT 1 cut(s) 1543
SchI GAGTC 1 cut(s) 1051
ScrFI CCNGG 1 cut(s) 177
SduI GDGCHC 3 cut(s) 377, 415, 491
SfaNI GCATC 7 cut(s) 184, 441, 548, 610, 655, 805, 1618
SfcI CTRYAG 2 cut(s) 120, 290
Sfr274I CTCGAG 1 cut(s) 408
SlaI CTCGAG 1 cut(s) 408
SmiMI CAYNNNNRTG 4 cut(s) 1377, 1380, 1748, 1814
SmlI CTYRAG 4 cut(s) 329, 408, 580, 1399
SmoI CTYRAG 4 cut(s) 329, 408, 580, 1399
SpeI ACTAGT 3 cut(s) 41, 995, 1327
SseBI AGGCCT 1 cut(s) 708
SsiI CCGC 8 cut(s) 5, 99, 126, 132, 138, 540, 1092, 1334
SspMI CTAG 6 cut(s) 42, 450, 546, 996, 1328, 1551
SstI GAGCTC 1 cut(s) 415
StuI AGGCCT 1 cut(s) 708
StyD4I CCNGG 1 cut(s) 175
StyI CCWWGG 4 cut(s) 666, 1099, 1653, 1702
TaaI ACNGT 5 cut(s) 27, 968, 1040, 1348, 1379
TaiI ACGT 2 cut(s) 77, 1795
TaqI TCGA 1 cut(s) 409
TatI WGTACW 1 cut(s) 1541
TauI GCSGC 6 cut(s) 8, 128, 134, 140, 543, 1337
Tru1I TTAA 3 cut(s) 659, 1400, 1557
Tru9I TTAA 3 cut(s) 659, 1400, 1557
TscAI CASTG 5 cut(s) 630, 1219, 1384, 1468, 1816
TseFI GTSAC 1 cut(s) 419
Tsp45I GTSAC 1 cut(s) 419
TspDTI ATGAA 6 cut(s) 235, 853, 1197, 1284, 1440, 1463
TspRI CASTG 5 cut(s) 630, 1219, 1384, 1468, 1816
Vha464I CTTAAG 1 cut(s) 1399
XapI RAATTY 4 cut(s) 717, 1168, 1615, 1627
XbaI TCTAGA 1 cut(s) 449
XceI RCATGY 2 cut(s) 390, 760
XcmI CCANNNNNNNNNTGG 1 cut(s) 226
XhoI CTCGAG 1 cut(s) 408
XmiI GTMKAC 1 cut(s) 366
XspI CTAG 6 cut(s) 42, 450, 546, 996, 1328, 1551
ZraI GACGTC 1 cut(s) 75
ZrmI AGTACT 1 cut(s) 1543
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.