Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0005217

Physical Location & Seq

Genomic Coordinates Reverse (-)

66065436 .. 66069261

Gene Structure 3826 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ41326

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1809 bp

ATGGCGGCTGCTTCTTCATCGCTGGCCTTCTTTGGGAGTAATAGCAGAGAAGAAAATCAAAACCAGCTGATGTCGTCGCTACAACAACCATCGCCAGCTTCCTCAACTGCTCCAATTTCTACCACTACACCCACTGCACCTCCTCCAAAGAAAAGAAGAAATCAACCCGGAAATCCAAATCCAGATGCGGAGGTCATCGCACTATCTCCCAAGACCTTAATGGCAACAAACAGATTCATATGTGAGGTGTGCAACAAAGGGTTCCAAAGGGAGCAGAACCTACAGCTCCACAGAAGAGGACACAACCTGCCTTGGAAGTTAAAGCAGAAGACTAACAAAGAACCCAAGCGCAAGGTCTATCTGTGCCCCGAGCCCACCTGCGTCCACCACGACCCATCTCGAGCCCTCGGAGACCTAACCGGCATCAAAAAGCACTTCTCGAGAAAGCACGGCGAGAAAAAGTGGAAGTGCGAGAAGTGCTCCAAGCGGTATGCTGTTCAATCTGATTGGAAGGCTCATTCTAAGACTTGCGGCACTCGAGAGTACCGATGCGACTGTGGTACTCTCTTCTCCAGGCGGGACAGTTTCATCACGCATAGGGCCTTCTGCGATGCACTAGCTCAAGAGAGTGCAAGGCATCCTTCAAGCTTAAGCGCCATGGCTACTAGTTCTCATCTCTATCCAGGAAATAACCAAATGATGAGCTTAGGCCTTTCCCAAATGGGTGGCGGTTCCTCCCTCCCACCTAATAACATGTTGAGGCTAGGGACTAATGGTGCTGGCGGTGCTGCGAAATTTGAGCACCTCATGAATCCTTCCTCATTCGGACAAGCGCAGCCTATACCTAATTCTTCGACTACTTTCTTCAATCAAGGGTTTCAGGATCAGCAACATTCTCTGAATGGACCATATGCTGCTAACAAATCGTTACATGGGCTAATGCAACTTCCTGATCTCCAAAGCAACACTCCTAGTAACAACTCGCCCTCATCAACTACTACTGCTGCCGGTAGTCTCTTTAACCTCGGCTTCTTTTCGAGTAATAATTCTGATCATCATCAGTTTAGTGATGGAAATGGTGGCACCCAAGGGACGACGCTCTTTCCGAATGGTATGGCTGATCATATTGGTTCGGGGCTACAATCCAGCCTCTTCGGGAATTCCTTACAACATGAGAACATGAATGGTGCACATATGTCTGCCACCGCATTGCTTCAGAAAGCCGCTCAAATGGGTTCAACTACAAGCACCGAAAGCTCATCTTTGCTAAGAGGATTAGCCGGGAGTACTTCATCAAGTACAAGAGCAGTAGCAAAATCCATTTCCGGTCGGCAACTGGTCTCTTCTAACTCTACTATCGGTGGTGTCAGCTTTAGCCGCGAGAGTAGTAGCGGTGGTGAACATGAGCAACACATGAGATCACAGCAGCAGCATGTGGAAAATGAAAACCACCATCTTCAAGGATTAATCATGAACTCTCTTACCAATGGAAACAGCTCCGCGGCCTCCATTTTCGGAGCAGCTGGGGATCATCATAACAACTTTGGTACTCATGGGTTTGCCAATGGCAGTACTACTAGGGTTTCTCTGATGGATCAGCAGCAGCACAACAACACAAACTTTAGCAACGTGGATGAGGCGAAATTAACCTTGGATTTCCTTGGCGTTGGAGGGATTGTAAGAAACATGGGTGGTGGTGGTGGTGGTGGATATGAGCACCGTGGCATCAATATGAGCTCTTTAGACCCAGAGTTGAAGTCATCGCAACAGCCAAGTCAACCTTATGGAGGCACTAGTGCACTGCAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0008150 GO:0008356 GO:0009889 GO:0009987 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022622 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048364 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0051301 GO:0060255 GO:0065007 GO:0080090 GO:0099402 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-C2H2 zf-C2H2_6 zf-C2H2_jaz

Protein Analysis

602

Amino Acids

64.46

Weight (kDa)

9.29

Isoelectric Point (pI)

48.5

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
C2H2-2nd_BIRD-IDD	PF22996	116 - 150	1.5e-22	BIRD-IDD transcription factor, second C2H2 zinc finger
C2CH-3rd_BIRD-IDD	PF22995	154 - 178	6.2e-15	BIRD-IDD transcription factor, third C2HC zinc finger
C2CH-4th_BIRD-IDD	PF22992	181 - 219	8.1e-24	BIRD-IDD transcription factor, fourth C2HC zinc finger

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005217)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G14580 AT1G14580 AT1G14580 AT1G14580 AT2G02080 AT2G02080 AT2G02080 AT2G02080 AT2G02080 AT2G02080
fragaria_vesca	FvH4_4g36050 FvH4_4g36050 FvH4_4g36050 FvH4_4g36050 FvH4_4g36050 FvH4_4g36050
malus_domestica	MD13G1013000.v1.1
prunus_persica	Prupe.1G341100_v2.0.a1
pyrus_communis	pycom13g01040 pycom16g00920
rosa_chinensis	RchiOBHm_Chr4g0445671
rosa_laevigata	RLG00000005718
rosa_multiflora	Rmu_sc0003637.1_g000020
rosa_roxburghii	Rroxscaffold_5G00386150
rosa_rugosa	Rorug04G0364600
rosa_samantha	Rh4AG425500 Rh4CG452500 Rh4DG433800
rosa_wichuraiana	Rw4G036450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	386
Acc36I	ACCTGC	2 cut(s)	315, 386
AccB1I	GGYRCC	1 cut(s)	1082
AccBSI	CCGCTC	1 cut(s)	1226
AccII	CGCG	2 cut(s)	1380, 1502
AclWI	GGATC	3 cut(s)	891, 1536, 1602
AcsI	RAATTY	2 cut(s)	794, 1159
AcuI	CTGAAG	1 cut(s)	1199
AfaI	GTAC	6 cut(s)	545, 562, 1288, 1300, 1549, 1573
AfiI	CCNNNNNNNGG	2 cut(s)	33, 1787
AflII	CTTAAG	1 cut(s)	649
AflIII	ACRYGT	1 cut(s)	753
AgsI	TTSAA	6 cut(s)	500, 645, 868, 1239, 1460, 1756
AhlI	ACTAGT	2 cut(s)	665, 1793
AjnI	CCWGG	2 cut(s)	572, 682
AjuI	GAANNNNNNNTTGG	2 cut(s)	1634, 1666
Alw21I	GWGCWC	6 cut(s)	482, 804, 1192, 1719, 1739, 1801
Alw26I	GTCTC	3 cut(s)	405, 1019, 1345
Alw44I	GTGCAC	2 cut(s)	1188, 1797
AlwI	GGATC	3 cut(s)	891, 1536, 1602
Ama87I	CYCGRG	4 cut(s)	368, 399, 439, 537
AoxI	GGCC	4 cut(s)	24, 600, 709, 1503
ApaLI	GTGCAC	2 cut(s)	1188, 1797
ApoI	RAATTY	2 cut(s)	794, 1159
AseI	ATTAAT	1 cut(s)	1466
AspLEI	GCGC	3 cut(s)	351, 656, 835
AspS9I	GGNCC	2 cut(s)	600, 905
AsuC2I	CCSGG	2 cut(s)	168, 1282
AsuHPI	GGTGA	1 cut(s)	1409
AvaI	CYCGRG	4 cut(s)	368, 399, 439, 537
AvaII	GGWCC	1 cut(s)	905
BaeGI	GKGCMC	3 cut(s)	368, 1192, 1801
BanI	GGYRCC	1 cut(s)	1082
BanII	GRGCYC	3 cut(s)	375, 406, 1739
BbsI	GAAGAC	1 cut(s)	335
Bbv12I	GWGCWC	6 cut(s)	482, 804, 1192, 1719, 1739, 1801
BbvI	GCAGC	9 cut(s)	775, 847, 901, 991, 1438, 1441, 1532, 1612, 1615
BccI	CCATC	5 cut(s)	97, 403, 1064, 1461, 1585
BceAI	ACGGC	1 cut(s)	466
BciT130I	CCWGG	2 cut(s)	574, 684
BclI	TGATCA	2 cut(s)	1051, 1120
BcnI	CCSGG	2 cut(s)	168, 1282
BcoDI	GTCTC	3 cut(s)	405, 1019, 1345
BcuI	ACTAGT	2 cut(s)	665, 1793
BfaI	CTAG	6 cut(s)	617, 666, 764, 972, 1578, 1794
BfmI	CTRYAG	1 cut(s)	281
BfoI	RGCGCY	1 cut(s)	657
BfrI	CTTAAG	1 cut(s)	649
BfuAI	ACCTGC	2 cut(s)	315, 386
BmcAI	AGTACT	2 cut(s)	1288, 1573
Bme1390I	CCNGG	4 cut(s)	168, 574, 684, 1282
Bme18I	GGWCC	1 cut(s)	905
BmeT110I	CYCGRG	4 cut(s)	368, 399, 439, 537
BmgT120I	GGNCC	2 cut(s)	600, 905
BmiI	GGNNCC	3 cut(s)	263, 733, 1084
BmrFI	CCNGG	4 cut(s)	168, 574, 684, 1282
BmsI	GCATC	6 cut(s)	175, 432, 539, 601, 646, 1734
BpiI	GAAGAC	1 cut(s)	335
BplI	GAGNNNNNCTC	2 cut(s)	464, 496
BpmI	CTGGAG	1 cut(s)	556
Bpu10I	CCTNAGC	1 cut(s)	706
BpuEI	CTTGAG	1 cut(s)	606
BpuMI	CCSGG	2 cut(s)	168, 1282
BsaBI	GATNNNNATC	1 cut(s)	1056
BsaI	GGTCTC	2 cut(s)	405, 1345
BsaJI	CCNNGG	9 cut(s)	311, 406, 657, 1024, 1087, 1500, 1650, 1660, 1720
BsaWI	WCCGGW	1 cut(s)	1325
BsaXI	ACNNNNNCTCC	4 cut(s)	124, 154, 1662, 1692
Bsc4I	CCNNNNNNNGG	2 cut(s)	33, 1787
Bse118I	RCCGGY	2 cut(s)	419, 1007
Bse1I	ACTGG	1 cut(s)	1341
Bse3DI	GCAATG	1 cut(s)	1208
Bse8I	GATNNNNATC	1 cut(s)	1056
BseBI	CCWGG	2 cut(s)	574, 684
BseDI	CCNNGG	9 cut(s)	311, 406, 657, 1024, 1087, 1500, 1650, 1660, 1720
BseGI	GGATG	2 cut(s)	637, 1639
BseJI	GATNNNNATC	1 cut(s)	1056
BseLI	CCNNNNNNNGG	2 cut(s)	33, 1787
BseMI	GCAATG	1 cut(s)	1208
BseNI	ACTGG	1 cut(s)	1341
BseRI	GAGGAG	1 cut(s)	132
BseSI	GKGCMC	3 cut(s)	368, 1192, 1801
BseXI	GCAGC	9 cut(s)	775, 847, 901, 991, 1438, 1441, 1532, 1612, 1615
BseYI	CCCAGC	1 cut(s)	1523
BsgI	GTGCAG	1 cut(s)	120
Bsh1236I	CGCG	2 cut(s)	1380, 1502
Bsh1285I	CGRYCG	1 cut(s)	1330
BshFI	GGCC	4 cut(s)	26, 602, 711, 1505
BshNI	GGYRCC	1 cut(s)	1082
BsiEI	CGRYCG	1 cut(s)	1330
BsiHKAI	GWGCWC	6 cut(s)	482, 804, 1192, 1719, 1739, 1801
BsiHKCI	CYCGRG	4 cut(s)	368, 399, 439, 537
BsiSI	CCGG	5 cut(s)	168, 420, 1008, 1281, 1326
BslFI	GGGAC	3 cut(s)	593, 781, 1105
BslI	CCNNNNNNNGG	2 cut(s)	33, 1787
BsmAI	GTCTC	3 cut(s)	405, 1019, 1345
BsmFI	GGGAC	3 cut(s)	593, 781, 1105
BsnI	GGCC	4 cut(s)	26, 602, 711, 1505
Bso31I	GGTCTC	2 cut(s)	405, 1345
BsoBI	CYCGRG	4 cut(s)	368, 399, 439, 537
Bsp1286I	GDGCHC	9 cut(s)	368, 375, 406, 482, 804, 1192, 1719, 1739, 1801
Bsp143I	GATC	7 cut(s)	883, 952, 1051, 1120, 1418, 1528, 1594
Bsp19I	CCATGG	1 cut(s)	657
BspANI	GGCC	4 cut(s)	26, 602, 711, 1505
BspFNI	CGCG	2 cut(s)	1380, 1502
BspHI	TCATGA	2 cut(s)	807, 1470
BspLI	GGNNCC	3 cut(s)	263, 733, 1084
BspMI	ACCTGC	2 cut(s)	315, 386
BspPI	GGATC	3 cut(s)	891, 1536, 1602
BspT107I	GGYRCC	1 cut(s)	1082
BspTI	CTTAAG	1 cut(s)	649
BspTNI	GGTCTC	2 cut(s)	405, 1345
BsrBI	CCGCTC	1 cut(s)	1226
BsrDI	GCAATG	1 cut(s)	1208
BsrFI	RCCGGY	2 cut(s)	419, 1007
BsrI	ACTGG	1 cut(s)	1341
BssAI	RCCGGY	2 cut(s)	419, 1007
BssECI	CCNNGG	9 cut(s)	311, 406, 657, 1024, 1087, 1500, 1650, 1660, 1720
BssMI	GATC	7 cut(s)	883, 952, 1051, 1120, 1418, 1528, 1594
BssT1I	CCWWGG	5 cut(s)	311, 657, 1087, 1650, 1660
Bst2UI	CCWGG	2 cut(s)	574, 684
Bst4CI	ACNGT	3 cut(s)	557, 584, 1721
Bst6I	CTCTTC	4 cut(s)	289, 572, 1157, 1348
BstAFI	CTTAAG	1 cut(s)	649
BstC8I	GCNNGC	3 cut(s)	24, 96, 781
BstDEI	CTNAG	3 cut(s)	522, 706, 1268
BstDSI	CCRYGG	3 cut(s)	657, 1500, 1720
BstENI	CCTNNNNNAGG	1 cut(s)	1785
BstF5I	GGATG	2 cut(s)	637, 1639
BstFNI	CGCG	2 cut(s)	1380, 1502
BstH2I	RGCGCY	1 cut(s)	657
BstHHI	GCGC	3 cut(s)	351, 656, 835
BstKTI	GATC	7 cut(s)	886, 955, 1054, 1123, 1421, 1531, 1597
BstMAI	GTCTC	3 cut(s)	405, 1019, 1345
BstMBI	GATC	7 cut(s)	883, 952, 1051, 1120, 1418, 1528, 1594
BstMCI	CGRYCG	1 cut(s)	1330
BstMWI	GCNNNNNNNGC	4 cut(s)	477, 785, 1254, 1377
BstNI	CCWGG	2 cut(s)	574, 684
BstNSI	RCATGY	2 cut(s)	757, 1436
BstSCI	CCNGG	4 cut(s)	166, 572, 682, 1280
BstSFI	CTRYAG	1 cut(s)	281
BstSLI	GKGCMC	3 cut(s)	368, 1192, 1801
BstUI	CGCG	2 cut(s)	1380, 1502
BstV1I	GCAGC	9 cut(s)	775, 847, 901, 991, 1438, 1441, 1532, 1612, 1615
BstV2I	GAAGAC	1 cut(s)	335
BstXI	CCANNNNNNTGG	1 cut(s)	725
BsuRI	GGCC	4 cut(s)	26, 602, 711, 1505
BtgI	CCRYGG	3 cut(s)	657, 1500, 1720
BtgZI	GCGATG	5 cut(s)	3, 75, 181, 624, 1746
BtsCI	GGATG	2 cut(s)	637, 1639
BtsI	GCAGTG	2 cut(s)	132, 1799
BtsIMutI	CAGTG	2 cut(s)	132, 1799
BveI	ACCTGC	2 cut(s)	315, 386
Cac8I	GCNNGC	3 cut(s)	24, 96, 781
CciI	TCATGA	2 cut(s)	807, 1470
CfoI	GCGC	3 cut(s)	351, 656, 835
Cfr10I	RCCGGY	2 cut(s)	419, 1007
Cfr13I	GGNCC	2 cut(s)	600, 905
Cfr42I	CCGCGG	1 cut(s)	1503
CseI	GACGC	2 cut(s)	370, 1105
Csp6I	GTAC	6 cut(s)	544, 561, 1287, 1299, 1548, 1572
CviQI	GTAC	6 cut(s)	544, 561, 1287, 1299, 1548, 1572
DdeI	CTNAG	3 cut(s)	522, 706, 1268
DpnI	GATC	7 cut(s)	885, 954, 1053, 1122, 1420, 1530, 1596
DpnII	GATC	7 cut(s)	883, 952, 1051, 1120, 1418, 1528, 1594
Eam1104I	CTCTTC	4 cut(s)	289, 572, 1157, 1348
EarI	CTCTTC	4 cut(s)	289, 572, 1157, 1348
Ecl136II	GAGCTC	1 cut(s)	1737
Eco130I	CCWWGG	5 cut(s)	311, 657, 1087, 1650, 1660
Eco147I	AGGCCT	1 cut(s)	711
Eco24I	GRGCYC	3 cut(s)	375, 406, 1739
Eco31I	GGTCTC	2 cut(s)	405, 1345
Eco47I	GGWCC	1 cut(s)	905
Eco53kI	GAGCTC	1 cut(s)	1737
Eco57I	CTGAAG	1 cut(s)	1199
Eco88I	CYCGRG	4 cut(s)	368, 399, 439, 537
EcoICRI	GAGCTC	1 cut(s)	1737
EcoNI	CCTNNNNNAGG	1 cut(s)	1785
EcoO109I	RGGNCCY	1 cut(s)	600
EcoRI	GAATTC	1 cut(s)	1159
EcoRII	CCWGG	2 cut(s)	572, 682
EcoT14I	CCWWGG	5 cut(s)	311, 657, 1087, 1650, 1660
EcoT38I	GRGCYC	3 cut(s)	375, 406, 1739
ErhI	CCWWGG	5 cut(s)	311, 657, 1087, 1650, 1660
FalI	AAGNNNNNCTT	6 cut(s)	625, 657, 1246, 1278, 1765, 1797
FaqI	GGGAC	3 cut(s)	593, 781, 1105
FauI	CCCGC	1 cut(s)	570
FauNDI	CATATG	3 cut(s)	239, 910, 1194
FbaI	TGATCA	2 cut(s)	1051, 1120
FokI	GGATG	2 cut(s)	624, 1646
FriOI	GRGCYC	3 cut(s)	375, 406, 1739
FspBI	CTAG	6 cut(s)	617, 666, 764, 972, 1578, 1794
GlaI	GCGC	3 cut(s)	350, 655, 834
GsaI	CCCAGC	1 cut(s)	1527
GsuI	CTGGAG	1 cut(s)	556
HaeII	RGCGCY	1 cut(s)	657
HaeIII	GGCC	4 cut(s)	26, 602, 711, 1505
HapII	CCGG	5 cut(s)	168, 420, 1008, 1281, 1326
HgaI	GACGC	2 cut(s)	370, 1105
HhaI	GCGC	3 cut(s)	351, 656, 835
Hin6I	GCGC	3 cut(s)	349, 654, 833
HinP1I	GCGC	3 cut(s)	349, 654, 833
HincII	GTYRAC	1 cut(s)	1778
HindII	GTYRAC	1 cut(s)	1778
HindIII	AAGCTT	1 cut(s)	646
HinfI	GANTC	2 cut(s)	234, 811
HpaII	CCGG	5 cut(s)	168, 420, 1008, 1281, 1326
HphI	GGTGA	1 cut(s)	1409
Hpy166II	GTNNAC	5 cut(s)	385, 1190, 1400, 1778, 1799
Hpy188I	TCNGA	9 cut(s)	410, 505, 827, 900, 1051, 1107, 1218, 1517, 1590
Hpy8I	GTNNAC	5 cut(s)	385, 1190, 1400, 1778, 1799
Hpy99I	CGWCG	2 cut(s)	79, 1099
HpyAV	CCTTC	5 cut(s)	37, 505, 613, 651, 825
HpyCH4III	ACNGT	3 cut(s)	557, 584, 1721
HpyCH4IV	ACGT	1 cut(s)	1629
HpyCH4V	TGCA	8 cut(s)	137, 252, 614, 632, 943, 1190, 1799, 1804
HpyF10VI	GCNNNNNNNGC	4 cut(s)	477, 785, 1254, 1377
HpyF3I	CTNAG	3 cut(s)	522, 706, 1268
HpySE526I	ACGT	1 cut(s)	1629
HspAI	GCGC	3 cut(s)	349, 654, 833
Ksp22I	TGATCA	2 cut(s)	1051, 1120
KspI	CCGCGG	1 cut(s)	1503
Kzo9I	GATC	7 cut(s)	883, 952, 1051, 1120, 1418, 1528, 1594
LmnI	GCTCC	6 cut(s)	115, 271, 291, 485, 1502, 1517
Lsp1109I	GCAGC	9 cut(s)	775, 847, 901, 991, 1438, 1441, 1532, 1612, 1615
LweI	GCATC	6 cut(s)	175, 432, 539, 601, 646, 1734
MaeI	CTAG	6 cut(s)	617, 666, 764, 972, 1578, 1794
MaeII	ACGT	1 cut(s)	1629
MaeIII	GTNAC	2 cut(s)	927, 974
MalI	GATC	7 cut(s)	885, 954, 1053, 1122, 1420, 1530, 1596
MbiI	CCGCTC	1 cut(s)	1226
MboI	GATC	7 cut(s)	883, 952, 1051, 1120, 1418, 1528, 1594
MhlI	GDGCHC	9 cut(s)	368, 375, 406, 482, 804, 1192, 1719, 1739, 1801
MluCI	AATT	6 cut(s)	114, 794, 847, 1045, 1159, 1643
MmeI	TCCRAC	1 cut(s)	1648
MseI	TTAA	6 cut(s)	218, 320, 650, 1020, 1466, 1646
MslI	CAYNNNNRTG	2 cut(s)	1730, 1804
MspA1I	CMGCKG	3 cut(s)	67, 1502, 1523
MspCI	CTTAAG	1 cut(s)	649
MspI	CCGG	5 cut(s)	168, 420, 1008, 1281, 1326
MspR9I	CCNGG	4 cut(s)	168, 574, 684, 1282
MvaI	CCWGG	2 cut(s)	574, 684
MvnI	CGCG	2 cut(s)	1380, 1502
MwoI	GCNNNNNNNGC	4 cut(s)	477, 785, 1254, 1377
NciI	CCSGG	2 cut(s)	168, 1282
NcoI	CCATGG	1 cut(s)	657
NdeI	CATATG	3 cut(s)	239, 910, 1194
NdeII	GATC	7 cut(s)	883, 952, 1051, 1120, 1418, 1528, 1594
NlaIV	GGNNCC	3 cut(s)	263, 733, 1084
NmeAIII	GCCGAG	1 cut(s)	1005
NspI	RCATGY	2 cut(s)	757, 1436
PaeR7I	CTCGAG	3 cut(s)	399, 439, 537
PagI	TCATGA	2 cut(s)	807, 1470
PaqCI	CACCTGC	1 cut(s)	386
PceI	AGGCCT	1 cut(s)	711
PciI	ACATGT	1 cut(s)	753
PcsI	WCGNNNNNNNCGW	2 cut(s)	544, 1103
PfeI	GAWTC	2 cut(s)	234, 811
PfoI	TCCNGGA	1 cut(s)	682
PscI	ACATGT	1 cut(s)	753
PshBI	ATTAAT	1 cut(s)	1466
Psp124BI	GAGCTC	1 cut(s)	1739
Psp6I	CCWGG	2 cut(s)	572, 682
PspFI	CCCAGC	1 cut(s)	1523
PspGI	CCWGG	2 cut(s)	572, 682
PspN4I	GGNNCC	3 cut(s)	263, 733, 1084
PspPI	GGNCC	2 cut(s)	600, 905
PvuII	CAGCTG	2 cut(s)	67, 1523
RsaI	GTAC	6 cut(s)	545, 562, 1288, 1300, 1549, 1573
RsaNI	GTAC	6 cut(s)	544, 561, 1287, 1299, 1548, 1572
RseI	CAYNNNNRTG	2 cut(s)	1730, 1804
SacI	GAGCTC	1 cut(s)	1739
SacII	CCGCGG	1 cut(s)	1503
SaqAI	TTAA	6 cut(s)	218, 320, 650, 1020, 1466, 1646
Sau3AI	GATC	7 cut(s)	883, 952, 1051, 1120, 1418, 1528, 1594
Sau96I	GGNCC	2 cut(s)	600, 905
ScaI	AGTACT	2 cut(s)	1288, 1573
ScrFI	CCNGG	4 cut(s)	168, 574, 684, 1282
SduI	GDGCHC	9 cut(s)	368, 375, 406, 482, 804, 1192, 1719, 1739, 1801
SfaNI	GCATC	6 cut(s)	175, 432, 539, 601, 646, 1734
SfcI	CTRYAG	1 cut(s)	281
Sfr274I	CTCGAG	3 cut(s)	399, 439, 537
Sfr303I	CCGCGG	1 cut(s)	1503
SgrBI	CCGCGG	1 cut(s)	1503
SinI	GGWCC	1 cut(s)	905
SlaI	CTCGAG	3 cut(s)	399, 439, 537
SmiMI	CAYNNNNRTG	2 cut(s)	1730, 1804
SmlI	CTYRAG	5 cut(s)	399, 439, 537, 621, 649
SmoI	CTYRAG	5 cut(s)	399, 439, 537, 621, 649
SpeI	ACTAGT	2 cut(s)	665, 1793
Sse9I	AATT	6 cut(s)	114, 794, 847, 1045, 1159, 1643
SseBI	AGGCCT	1 cut(s)	711
SspMI	CTAG	6 cut(s)	617, 666, 764, 972, 1578, 1794
SstI	GAGCTC	1 cut(s)	1739
StuI	AGGCCT	1 cut(s)	711
StyD4I	CCNGG	4 cut(s)	166, 572, 682, 1280
StyI	CCWWGG	5 cut(s)	311, 657, 1087, 1650, 1660
TaaI	ACNGT	3 cut(s)	557, 584, 1721
TaiI	ACGT	1 cut(s)	1632
TaqI	TCGA	5 cut(s)	400, 440, 538, 854, 1037
TasI	AATT	6 cut(s)	114, 794, 847, 1045, 1159, 1643
TatI	WGTACW	3 cut(s)	1286, 1298, 1571
TauI	GCSGC	5 cut(s)	8, 534, 1226, 1380, 1505
TfiI	GAWTC	2 cut(s)	234, 811
Tru1I	TTAA	6 cut(s)	218, 320, 650, 1020, 1466, 1646
Tru9I	TTAA	6 cut(s)	218, 320, 650, 1020, 1466, 1646
TscAI	CASTG	2 cut(s)	139, 1806
TspDTI	ATGAA	8 cut(s)	6, 226, 577, 824, 1196, 1281, 1458, 1487
TspRI	CASTG	2 cut(s)	139, 1806
Vha464I	CTTAAG	1 cut(s)	649
VneI	GTGCAC	2 cut(s)	1188, 1797
VpaK11BI	GGWCC	1 cut(s)	905
VspI	ATTAAT	1 cut(s)	1466
XagI	CCTNNNNNAGG	1 cut(s)	1785
XapI	RAATTY	2 cut(s)	794, 1159
XceI	RCATGY	2 cut(s)	757, 1436
XcmI	CCANNNNNNNNNTGG	1 cut(s)	217
XhoI	CTCGAG	3 cut(s)	399, 439, 537
XspI	CTAG	6 cut(s)	617, 666, 764, 972, 1578, 1794
ZrmI	AGTACT	2 cut(s)	1288, 1573

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.