pycom16g00920

ZINC FINGER protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr16
Physical Location & Seq
Forward (+)
552735 .. 555834
3100 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom16g00920.3

Sequence Viewer

Length: 1428 bp
ATGGCGGCTGCTTCTTCATCGATGCCGTTCTTTGGAAGTAGTAGTAGCAGAGAAGAAAACCAAAGCCAGATGACTTCGTCGATCCTTCCGCCTTCCTCAAATGCTACCGCCGCAGCCACAGGCACAGCCCCACCACCTCAGAAGAAAAGGAGAAATCAACCTGGAAATCCAAATCCAGATGCGGAGGTCATCGCACTATCTCCCAAGACGCTAATGGCAACAAACAGGTTCATATGTGAGGTCTGCAACAAAGGGTTTCAAAGGGAGCAAAACCTACAGCTCCACAGAAGAGGACACAACCTGCCTTGGAAGCTCAAGCAGAAGACTAATAAAGAACCCAGGCGCAAGGTCTATCTATGCCCTGAACCATCATGCGTTCACCATGACCCCTCTCGAGCTCTCGGAGACCTCACCGGCATCAAAAAACACTACTCAAGAAAACACGGCGAGAAGAAATGGAAGTGCGACAAGTGCTCCAAGAGGTACGCCGTTCAATCGGATTGGAAGGCTCATTCTAAGACATGCGGAACTAGGGAATACAGATGCGACTGTGGCACTCTCTTCTCAAGGCGGGACAGTTTTATCACTCATAGGGCTTTCTGTGATGCACTGGCTCAGGAGAGTGCAAGGCATCCTTCAAGCTTAAGCACAATGGGCGGCAACCTCTATGGAAACAACCACATGAGCTTAGGGCTACCCCAAATCCCCTCACTCCAAAACTCAACCCACCTCCCTAACAACATGTTGAGGTTAGGTAGTGGTGGCAGCGCAAAGTTTGAGCACCTCATCCCACCATCAAATCCGTCTTCGTTCGGATCAAAAGCCATGCCTAATTCCCCCAATTTCTTCATGAGAGACATTGCTAACCAGCAAGGGTTTCAAGATCAGCACCAATTTCCAAGCAAGGCATTACATGGACTAATGCAACTTCCTGATCTCCAAAGCAACCCTAACAACAACTCACCCTCATCGAATAGTGCTGCGAATCTCTTTAACCTGAGCTTCTTTTCCAACAACAGTACCAGTAACAGCATTGCTCCTCCAGATCATCAATTTAGTGATGGTAACGGCAGTGGCCAAGGGTTTAGCATGGGTAATGATCATCAAATTGGGTCGGGTTCTCTACCATCTCTCTATGGGAATTCGATGCAACACGAAGGTGGCGTGGCTCCACACATGTCTGCCACTGCATTGCTTCAGAAAGCTGCTCAAATGGGTTCAACTACAAGCACCGAAAGCTCGTCTTTGCTTAGGGGATTAGGCAATTCGTCAACAAGAGCAGCTAAATCAGGAAGGCAACTAGTGTCTGCGCCCTCAAGCGTTGGAGTCAGTTTTAGTGGTGATCATCATCACAGTACTAATGGGGGTGAACAACACTTGATCGATCATCACAGCAGGTGGAAAATGAAAACCATCTTCAAGGACTAA

Protein Analysis

476

Amino Acids

51.68

Weight (kDa)

9.68

Isoelectric Point (pI)

54.95

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1386
Acc36I ACCTGC 2 cut(s) 309, 1386
AciI CCGC 8 cut(s) 5, 89, 108, 111, 182, 525, 571, 657
AclWI GGATC 2 cut(s) 76, 823
AcoI YGGCCR 1 cut(s) 1075
AcsI RAATTY 1 cut(s) 1141
AcuI CTGAAG 1 cut(s) 1181
AfaI GTAC 3 cut(s) 485, 1021, 1357
AfiI CCNNNNNNNGG 1 cut(s) 32
AflII CTTAAG 1 cut(s) 643
AflIII ACRYGT 2 cut(s) 741, 1176
AgsI TTSAA 6 cut(s) 260, 494, 639, 881, 1221, 1420
AhlI ACTAGT 1 cut(s) 1300
AjnI CCWGG 2 cut(s) 160, 338
AleI CACNNNNGTG 1 cut(s) 1158
AluBI AGCT 9 cut(s) 280, 313, 398, 642, 687, 1002, 1205, 1239, 1283
AluI AGCT 9 cut(s) 280, 313, 398, 642, 687, 1002, 1205, 1239, 1283
Alw21I GWGCWC 3 cut(s) 400, 476, 783
Alw26I GTCTC 2 cut(s) 399, 849
AlwI GGATC 2 cut(s) 76, 823
Ama87I CYCGRG 1 cut(s) 393
AoxI GGCC 1 cut(s) 1075
ApeKI GCWGC 6 cut(s) 8, 113, 765, 980, 1205, 1280
ApoI RAATTY 1 cut(s) 1141
AspLEI GCGC 3 cut(s) 345, 770, 1312
AsuHPI GGTGA 5 cut(s) 371, 403, 954, 1352, 1379
AvaI CYCGRG 1 cut(s) 393
BaeI ACNNNNGTAYC 2 cut(s) 1003, 1036
BalI TGGCCA 1 cut(s) 1077
BanII GRGCYC 1 cut(s) 400
BbsI GAAGAC 2 cut(s) 329, 798
Bbv12I GWGCWC 3 cut(s) 400, 476, 783
BbvI GCAGC 5 cut(s) 125, 777, 967, 1192, 1292
BccI CCATC 5 cut(s) 376, 802, 1055, 1135, 1421
BceAI ACGGC 4 cut(s) 10, 460, 473, 1084
BciT130I CCWGG 2 cut(s) 162, 340
BclI TGATCA 2 cut(s) 1099, 1342
BcoDI GTCTC 2 cut(s) 399, 849
BcuI ACTAGT 1 cut(s) 1300
BfaI CTAG 2 cut(s) 531, 1301
BfmI CTRYAG 1 cut(s) 275
BfrI CTTAAG 1 cut(s) 643
BfuAI ACCTGC 2 cut(s) 309, 1386
BisI GCNGC 9 cut(s) 6, 9, 111, 114, 658, 766, 981, 1206, 1281
BlsI GCNGC 9 cut(s) 7, 10, 112, 115, 659, 767, 982, 1207, 1282
BmcAI AGTACT 1 cut(s) 1357
Bme1390I CCNGG 2 cut(s) 162, 340
BmeT110I CYCGRG 1 cut(s) 393
BmiI GGNNCC 1 cut(s) 1170
BmrFI CCNGG 2 cut(s) 162, 340
BmsI GCATC 7 cut(s) 12, 169, 426, 533, 595, 640, 1137
BpiI GAAGAC 2 cut(s) 329, 798
BpmI CTGGAG 1 cut(s) 1026
Bpu10I CCTNAGC 4 cut(s) 615, 688, 998, 1250
BpuEI CTTGAG 4 cut(s) 299, 418, 550, 1300
Bsa29I ATCGAT 2 cut(s) 20, 1383
BsaBI GATNNNNATC 1 cut(s) 1347
BsaI GGTCTC 1 cut(s) 399
BsaJI CCNNGG 3 cut(s) 305, 338, 1078
BsaXI ACNNNNNCTCC 2 cut(s) 458, 488
Bsc4I CCNNNNNNNGG 1 cut(s) 32
Bse118I RCCGGY 1 cut(s) 413
Bse1I ACTGG 2 cut(s) 615, 1023
Bse3DI GCAATG 3 cut(s) 858, 1032, 1190
Bse8I GATNNNNATC 1 cut(s) 1347
BseBI CCWGG 2 cut(s) 162, 340
BseCI ATCGAT 2 cut(s) 20, 1383
BseDI CCNNGG 3 cut(s) 305, 338, 1078
BseGI GGATG 2 cut(s) 631, 786
BseJI GATNNNNATC 1 cut(s) 1347
BseLI CCNNNNNNNGG 1 cut(s) 32
BseMI GCAATG 3 cut(s) 858, 1032, 1190
BseMII CTCAG 3 cut(s) 152, 629, 989
BseNI ACTGG 2 cut(s) 615, 1023
BseRI GAGGAG 1 cut(s) 1029
BseXI GCAGC 5 cut(s) 125, 777, 967, 1192, 1292
BshFI GGCC 1 cut(s) 1077
BshVI ATCGAT 2 cut(s) 20, 1383
BsiHKAI GWGCWC 3 cut(s) 400, 476, 783
BsiHKCI CYCGRG 1 cut(s) 393
BsiSI CCGG 1 cut(s) 414
BslFI GGGAC 1 cut(s) 587
BslI CCNNNNNNNGG 1 cut(s) 32
BsmAI GTCTC 2 cut(s) 399, 849
BsmFI GGGAC 1 cut(s) 587
BsnI GGCC 1 cut(s) 1077
Bso31I GGTCTC 1 cut(s) 399
BsoBI CYCGRG 1 cut(s) 393
Bsp1286I GDGCHC 3 cut(s) 400, 476, 783
Bsp143I GATC 9 cut(s) 81, 815, 883, 934, 1045, 1099, 1342, 1380, 1384
BspACI CCGC 8 cut(s) 5, 89, 108, 111, 182, 525, 571, 657
BspANI GGCC 1 cut(s) 1077
BspCNI CTCAG 3 cut(s) 151, 628, 990
BspDI ATCGAT 2 cut(s) 20, 1383
BspHI TCATGA 1 cut(s) 849
BspLI GGNNCC 1 cut(s) 1170
BspMI ACCTGC 2 cut(s) 309, 1386
BspPI GGATC 2 cut(s) 76, 823
BspTI CTTAAG 1 cut(s) 643
BspTNI GGTCTC 1 cut(s) 399
BsrDI GCAATG 3 cut(s) 858, 1032, 1190
BsrFI RCCGGY 1 cut(s) 413
BsrI ACTGG 2 cut(s) 615, 1023
BssAI RCCGGY 1 cut(s) 413
BssECI CCNNGG 3 cut(s) 305, 338, 1078
BssMI GATC 9 cut(s) 81, 815, 883, 934, 1045, 1099, 1342, 1380, 1384
BssT1I CCWWGG 2 cut(s) 305, 1078
Bst2UI CCWGG 2 cut(s) 162, 340
Bst4CI ACNGT 4 cut(s) 551, 578, 1019, 1355
Bst6I CTCTTC 2 cut(s) 283, 566
BstAFI CTTAAG 1 cut(s) 643
BstDEI CTNAG 6 cut(s) 138, 516, 615, 688, 998, 1250
BstF5I GGATG 2 cut(s) 631, 786
BstHHI GCGC 3 cut(s) 345, 770, 1312
BstKTI GATC 9 cut(s) 84, 818, 886, 937, 1048, 1102, 1345, 1383, 1387
BstMAI GTCTC 2 cut(s) 399, 849
BstMBI GATC 9 cut(s) 81, 815, 883, 934, 1045, 1099, 1342, 1380, 1384
BstMWI GCNNNNNNNGC 6 cut(s) 110, 310, 471, 552, 654, 1236
BstNI CCWGG 2 cut(s) 162, 340
BstNSI RCATGY 3 cut(s) 525, 745, 1180
BstSCI CCNGG 2 cut(s) 160, 338
BstSFI CTRYAG 1 cut(s) 275
BstV1I GCAGC 5 cut(s) 125, 777, 967, 1192, 1292
BstV2I GAAGAC 2 cut(s) 329, 798
Bsu15I ATCGAT 2 cut(s) 20, 1383
BsuRI GGCC 1 cut(s) 1077
BsuTUI ATCGAT 2 cut(s) 20, 1383
BtgZI GCGATG 1 cut(s) 175
BtsCI GGATG 2 cut(s) 631, 786
BtsI GCAGTG 2 cut(s) 1078, 1185
BtsIMutI CAGTG 3 cut(s) 608, 1078, 1185
BveI ACCTGC 2 cut(s) 309, 1386
CciI TCATGA 1 cut(s) 849
CfoI GCGC 3 cut(s) 345, 770, 1312
Cfr10I RCCGGY 1 cut(s) 413
ClaI ATCGAT 2 cut(s) 20, 1383
CseI GACGC 1 cut(s) 217
Csp6I GTAC 3 cut(s) 484, 1020, 1356
CviQI GTAC 3 cut(s) 484, 1020, 1356
DdeI CTNAG 6 cut(s) 138, 516, 615, 688, 998, 1250
DpnI GATC 9 cut(s) 83, 817, 885, 936, 1047, 1101, 1344, 1382, 1386
DpnII GATC 9 cut(s) 81, 815, 883, 934, 1045, 1099, 1342, 1380, 1384
EaeI YGGCCR 1 cut(s) 1075
Eam1104I CTCTTC 2 cut(s) 283, 566
EarI CTCTTC 2 cut(s) 283, 566
EciI GGCGGA 1 cut(s) 78
Ecl136II GAGCTC 1 cut(s) 398
Eco130I CCWWGG 2 cut(s) 305, 1078
Eco24I GRGCYC 1 cut(s) 400
Eco31I GGTCTC 1 cut(s) 399
Eco53kI GAGCTC 1 cut(s) 398
Eco57I CTGAAG 1 cut(s) 1181
Eco88I CYCGRG 1 cut(s) 393
EcoICRI GAGCTC 1 cut(s) 398
EcoRI GAATTC 1 cut(s) 1141
EcoRII CCWGG 2 cut(s) 160, 338
EcoT14I CCWWGG 2 cut(s) 305, 1078
EcoT38I GRGCYC 1 cut(s) 400
ErhI CCWWGG 2 cut(s) 305, 1078
FalI AAGNNNNNCTT 4 cut(s) 619, 651, 1228, 1260
FaqI GGGAC 1 cut(s) 587
FauI CCCGC 1 cut(s) 564
FauNDI CATATG 1 cut(s) 233
FbaI TGATCA 2 cut(s) 1099, 1342
Fnu4HI GCNGC 9 cut(s) 6, 9, 111, 114, 658, 766, 981, 1206, 1281
FokI GGATG 2 cut(s) 618, 773
FriOI GRGCYC 1 cut(s) 400
Fsp4HI GCNGC 9 cut(s) 6, 9, 111, 114, 658, 766, 981, 1206, 1281
FspBI CTAG 2 cut(s) 531, 1301
GlaI GCGC 3 cut(s) 344, 769, 1311
GluI GCNGC 9 cut(s) 6, 9, 111, 114, 658, 766, 981, 1206, 1281
GsuI CTGGAG 1 cut(s) 1026
HaeIII GGCC 1 cut(s) 1077
HapII CCGG 1 cut(s) 414
HgaI GACGC 1 cut(s) 217
HhaI GCGC 3 cut(s) 345, 770, 1312
Hin6I GCGC 3 cut(s) 343, 768, 1310
HinP1I GCGC 3 cut(s) 343, 768, 1310
HincII GTYRAC 1 cut(s) 1272
HindII GTYRAC 1 cut(s) 1272
HindIII AAGCTT 1 cut(s) 640
HinfI GANTC 2 cut(s) 985, 1326
HpaII CCGG 1 cut(s) 414
HphI GGTGA 5 cut(s) 371, 403, 954, 1352, 1379
Hpy166II GTNNAC 3 cut(s) 379, 1272, 1370
Hpy188I TCNGA 5 cut(s) 141, 404, 499, 815, 1200
Hpy188III TCNNGA 9 cut(s) 176, 393, 435, 617, 850, 881, 932, 1043, 1290
Hpy8I GTNNAC 3 cut(s) 379, 1272, 1370
Hpy99I CGWCG 1 cut(s) 82
HpyAV CCTTC 6 cut(s) 95, 102, 499, 645, 1151, 1287
HpyCH4III ACNGT 4 cut(s) 551, 578, 1019, 1355
HpyCH4V TGCA 6 cut(s) 246, 608, 626, 925, 1150, 1190
HpyF10VI GCNNNNNNNGC 6 cut(s) 110, 310, 471, 552, 654, 1236
HpyF3I CTNAG 6 cut(s) 138, 516, 615, 688, 998, 1250
HspAI GCGC 3 cut(s) 343, 768, 1310
Ksp22I TGATCA 2 cut(s) 1099, 1342
Kzo9I GATC 9 cut(s) 81, 815, 883, 934, 1045, 1099, 1342, 1380, 1384
LmnI GCTCC 5 cut(s) 265, 285, 479, 1042, 1174
Lsp1109I GCAGC 5 cut(s) 125, 777, 967, 1192, 1292
LweI GCATC 7 cut(s) 12, 169, 426, 533, 595, 640, 1137
MaeI CTAG 2 cut(s) 531, 1301
MaeIII GTNAC 2 cut(s) 1025, 1064
MalI GATC 9 cut(s) 83, 817, 885, 936, 1047, 1101, 1344, 1382, 1386
MboI GATC 9 cut(s) 81, 815, 883, 934, 1045, 1099, 1342, 1380, 1384
MhlI GDGCHC 3 cut(s) 400, 476, 783
MlsI TGGCCA 1 cut(s) 1077
MluCI AATT 7 cut(s) 832, 841, 893, 1052, 1107, 1141, 1264
MluNI TGGCCA 1 cut(s) 1077
MlyI GAGTC 1 cut(s) 1335
MmeI TCCRAC 2 cut(s) 1035, 1303
Mox20I TGGCCA 1 cut(s) 1077
MscI TGGCCA 1 cut(s) 1077
MseI TTAA 2 cut(s) 644, 993
MslI CAYNNNNRTG 1 cut(s) 1158
Msp20I TGGCCA 1 cut(s) 1077
MspCI CTTAAG 1 cut(s) 643
MspI CCGG 1 cut(s) 414
MspR9I CCNGG 2 cut(s) 162, 340
MvaI CCWGG 2 cut(s) 162, 340
MwoI GCNNNNNNNGC 6 cut(s) 110, 310, 471, 552, 654, 1236
NdeI CATATG 1 cut(s) 233
NdeII GATC 9 cut(s) 81, 815, 883, 934, 1045, 1099, 1342, 1380, 1384
NlaIV GGNNCC 1 cut(s) 1170
NspI RCATGY 3 cut(s) 525, 745, 1180
OliI CACNNNNGTG 1 cut(s) 1158
PaeR7I CTCGAG 1 cut(s) 393
PagI TCATGA 1 cut(s) 849
PaqCI CACCTGC 1 cut(s) 1386
PciI ACATGT 2 cut(s) 741, 1176
PcsI WCGNNNNNNNCGW 1 cut(s) 1161
PfeI GAWTC 1 cut(s) 985
PflFI GACNNNGTC 1 cut(s) 76
PkrI GCNGC 9 cut(s) 7, 10, 112, 115, 659, 767, 982, 1207, 1282
PleI GAGTC 1 cut(s) 1334
PpsI GAGTC 1 cut(s) 1334
PscI ACATGT 2 cut(s) 741, 1176
Psp124BI GAGCTC 1 cut(s) 400
Psp6I CCWGG 2 cut(s) 160, 338
PspGI CCWGG 2 cut(s) 160, 338
PspN4I GGNNCC 1 cut(s) 1170
PsyI GACNNNGTC 1 cut(s) 76
RsaI GTAC 3 cut(s) 485, 1021, 1357
RsaNI GTAC 3 cut(s) 484, 1020, 1356
RseI CAYNNNNRTG 1 cut(s) 1158
SacI GAGCTC 1 cut(s) 400
SaqAI TTAA 2 cut(s) 644, 993
SatI GCNGC 9 cut(s) 6, 9, 111, 114, 658, 766, 981, 1206, 1281
Sau3AI GATC 9 cut(s) 81, 815, 883, 934, 1045, 1099, 1342, 1380, 1384
ScaI AGTACT 1 cut(s) 1357
SchI GAGTC 1 cut(s) 1335
ScrFI CCNGG 2 cut(s) 162, 340
SduI GDGCHC 3 cut(s) 400, 476, 783
SfaNI GCATC 7 cut(s) 12, 169, 426, 533, 595, 640, 1137
SfcI CTRYAG 1 cut(s) 275
Sfr274I CTCGAG 1 cut(s) 393
SlaI CTCGAG 1 cut(s) 393
SmiMI CAYNNNNRTG 1 cut(s) 1158
SmlI CTYRAG 6 cut(s) 314, 393, 433, 565, 643, 1315
SmoI CTYRAG 6 cut(s) 314, 393, 433, 565, 643, 1315
SpeI ACTAGT 1 cut(s) 1300
Sse9I AATT 7 cut(s) 832, 841, 893, 1052, 1107, 1141, 1264
SsiI CCGC 8 cut(s) 5, 89, 108, 111, 182, 525, 571, 657
SspMI CTAG 2 cut(s) 531, 1301
SstI GAGCTC 1 cut(s) 400
StyD4I CCNGG 2 cut(s) 160, 338
StyI CCWWGG 2 cut(s) 305, 1078
TaaI ACNGT 4 cut(s) 551, 578, 1019, 1355
TaqI TCGA 6 cut(s) 20, 80, 394, 971, 1145, 1383
TasI AATT 7 cut(s) 832, 841, 893, 1052, 1107, 1141, 1264
TatI WGTACW 1 cut(s) 1355
TauI GCSGC 3 cut(s) 8, 113, 660
TfiI GAWTC 1 cut(s) 985
Tru1I TTAA 2 cut(s) 644, 993
Tru9I TTAA 2 cut(s) 644, 993
TscAI CASTG 3 cut(s) 615, 1078, 1192
TseI GCWGC 6 cut(s) 8, 113, 765, 980, 1205, 1280
TspDTI ATGAA 4 cut(s) 6, 220, 838, 1421
TspGWI ACGGA 1 cut(s) 792
TspRI CASTG 3 cut(s) 615, 1078, 1192
Tth111I GACNNNGTC 1 cut(s) 76
Vha464I CTTAAG 1 cut(s) 643
XapI RAATTY 1 cut(s) 1141
XceI RCATGY 3 cut(s) 525, 745, 1180
XcmI CCANNNNNNNNNTGG 1 cut(s) 211
XhoI CTCGAG 1 cut(s) 393
XspI CTAG 2 cut(s) 531, 1301
ZrmI AGTACT 1 cut(s) 1357
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.