Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0005217

Physical Location & Seq

Genomic Coordinates Reverse (-)

65107534 .. 65111528

Gene Structure 3995 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00386150.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1815 bp

ATGGCGGCTGCTTCTTCATCGTTGGCCTTCTTTGGGAGTAATAGCAGAGAAGAAAATCAAAACCAGATGATGTCGTCGCTACAACAACCATCGCCAGCTTCCTCAACTGCTCCAATTTCTACCACTACACCCACTGCACCTCCTCCAAAGAAAAGAAGAAATCAACCCGGAAATCCAACAGATCCAGATGCGGAGGTCATCGCACTATCTCCCAAGACCTTAATGGCAACAAACAGGTTCATATGTGAGGTGTGCAACAAAGGGTTCCAAAGGGAGCAGAACCTACAGCTCCACAGAAGAGGACACAACCTGCCGTGGAAGTTAAAGCAGAAGACTAACAAAGAACCCAAGCGCAAGGTCTATCTGTGCCCCGAGCCCACCTGCGTCCACCACGACCCATCTCGAGCCCTCGGAGACCTAACCGGCATCAAAAAGCACTTCGAGCCCTCGAGAAAGCACGGAGAGAAAAAGTGGAAGTGCGAGAAGTGCTCCAAGCGGTATGCTGTTCAATCCGATTGGAAGGCTCATTCTAAGACTTGCGGCACTCGAGAGTACCGCTGCGACTGTGGTACTCTCTTCTCCAGGCGGGACAGTTTCATCACGCATAGGGCCTTCTGCGATGCACTAGCTCAAGAGAGCGCAAGGCATCCTTCAAGCTTAAGCGCCATGGCTACTAGTTCTCATCTCTATCCAGGAAATAACCAAATGATGAGCTTAGGCCTATCCCAAATGGGTGGCGGTTCCTCCCTCCCACCTAATAACATGTTGAGGCTAGGGACTAATGGTGCTGGCGGTGCTGCGAAATTTGAGCACCTCATGAATCCTTCCTCATTCGGACAAGCGCAGCCTATACCTAATTCTTCGACTACTTTCTTCAATCAAGGGTTTCAGGATCAGCAACAATCTCTGAATGGACCATATGCTGCTAACAAGTCGTTACATGGGCTAATGCAACTTCCTGATCTCCAAAGCAACACTCCTAGTAACAACTCGCCCTCATCAACTACTACTGCTGCCGGTAGTCTCTTTAACCTTGGCTTCTTTTCGAGTAATAATTCTGATCATCATCAGTTTAGTGATGGAAATGGTGGCACCCAAGGGACGACGCTCTTTCCGAATGGTATGGCTGATCATATTGGCTCGGGGCTACCATCCAGCCTCTTCGGGAATTCCTTACAACATGAGAACATGAATGCTGCACATATGTCTGCCACCGCATTGCTTCAGAAAGCCGCTCAAATGGGTTCAACTACAAGCACCGAAAGCTCATCTTTGCTAAGAGGATTAGCCGGGAGTACTTCCTCAAGTACAAGAGCAGTAGCAAACTCCATTTCCGGTCGGCAACTGGTCTCTTCTAACTCCACTATCGGTGGTGTCAGCTTTAGCCGCGAGAGTAGTAGCGGTGGTGAACATGAGCAACACATGAGATCACAGCAGCAGCATGTGGAAAATGAAAACCACCATCTTCAAGGATTAATCATGAACTCTCTTACCAATGGAAACAGCTCCGCGGCCTCCATTTTCGCATCAGCTGGGGATCATCATAACAACTTTGGTACTCAGGGGTTTGCCAATGGCAGTACTACTAGGGTTTCTCTGATGGATCAGCAGCAGCGCAACAACACAAACTTTAGCAACGTGGATGAGGCGAAATTAACCTTGGATTTCCTTGGCGTTGGAGGGATTGTAAGAAACATGGGTGGTGGTGGTGGTGGATATGAGCACCGTGGCATCAATATGAGCTCTTTAGACCCAGAGTTGAAGTCATCGCAACAGCCAAGTCAACCTTATGGAGGCACTAGTGCACTGCAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0008150 GO:0008356 GO:0009889 GO:0009987 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022622 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048364 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0051301 GO:0060255 GO:0065007 GO:0080090 GO:0099402 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-C2H2 zf-C2H2_6 zf-C2H2_jaz

Protein Analysis

604

Amino Acids

64.75

Weight (kDa)

9.16

Isoelectric Point (pI)

49.61

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
C2H2-2nd_BIRD-IDD	PF22996	117 - 153	4.1e-20	BIRD-IDD transcription factor, second C2H2 zinc finger
C2CH-3rd_BIRD-IDD	PF22995	157 - 181	6.3e-15	BIRD-IDD transcription factor, third C2HC zinc finger
C2CH-4th_BIRD-IDD	PF22992	184 - 222	8.1e-24	BIRD-IDD transcription factor, fourth C2HC zinc finger

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005217)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G14580 AT1G14580 AT1G14580 AT1G14580 AT2G02080 AT2G02080 AT2G02080 AT2G02080 AT2G02080 AT2G02080
fragaria_vesca	FvH4_4g36050 FvH4_4g36050 FvH4_4g36050 FvH4_4g36050 FvH4_4g36050 FvH4_4g36050
malus_domestica	MD13G1013000.v1.1
prunus_persica	Prupe.1G341100_v2.0.a1
pyrus_communis	pycom13g01040 pycom16g00920
rosa_chinensis	RchiOBHm_Chr4g0445671
rosa_laevigata	RLG00000005718
rosa_multiflora	Rmu_sc0003637.1_g000020
rosa_roxburghii	Rroxscaffold_5G00386150
rosa_rugosa	Rorug04G0364600
rosa_samantha	Rh4AG425500 Rh4CG452500 Rh4DG433800
rosa_wichuraiana	Rw4G036450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	389
Acc36I	ACCTGC	2 cut(s)	318, 389
AccB1I	GGYRCC	1 cut(s)	1091
AccBSI	CCGCTC	1 cut(s)	1235
AccII	CGCG	2 cut(s)	1389, 1511
AclWI	GGATC	4 cut(s)	176, 900, 1545, 1611
AcsI	RAATTY	2 cut(s)	803, 1168
AcuI	CTGAAG	1 cut(s)	1208
AfaI	GTAC	6 cut(s)	554, 571, 1297, 1309, 1558, 1582
AfiI	CCNNNNNNNGG	2 cut(s)	33, 1793
AflII	CTTAAG	1 cut(s)	658
AflIII	ACRYGT	1 cut(s)	762
AgsI	TTSAA	6 cut(s)	509, 654, 877, 1248, 1469, 1762
AhlI	ACTAGT	2 cut(s)	674, 1799
AjnI	CCWGG	2 cut(s)	581, 691
AjuI	GAANNNNNNNTTGG	2 cut(s)	1643, 1675
Alw21I	GWGCWC	5 cut(s)	491, 813, 1725, 1745, 1807
Alw26I	GTCTC	3 cut(s)	408, 1028, 1354
Alw44I	GTGCAC	1 cut(s)	1803
AlwI	GGATC	4 cut(s)	176, 900, 1545, 1611
Ama87I	CYCGRG	5 cut(s)	371, 402, 448, 546, 1141
AoxI	GGCC	4 cut(s)	24, 609, 718, 1512
ApaLI	GTGCAC	1 cut(s)	1803
ApoI	RAATTY	2 cut(s)	803, 1168
AseI	ATTAAT	1 cut(s)	1475
AspLEI	GCGC	5 cut(s)	354, 641, 665, 844, 1617
AspS9I	GGNCC	2 cut(s)	609, 914
AsuC2I	CCSGG	2 cut(s)	168, 1291
AsuHPI	GGTGA	1 cut(s)	1418
AvaI	CYCGRG	5 cut(s)	371, 402, 448, 546, 1141
AvaII	GGWCC	1 cut(s)	914
BaeGI	GKGCMC	2 cut(s)	371, 1807
BanI	GGYRCC	1 cut(s)	1091
BanII	GRGCYC	4 cut(s)	378, 409, 447, 1745
BbsI	GAAGAC	1 cut(s)	338
Bbv12I	GWGCWC	5 cut(s)	491, 813, 1725, 1745, 1807
BccI	CCATC	6 cut(s)	97, 406, 1073, 1159, 1470, 1594
BceAI	ACGGC	1 cut(s)	298
BciT130I	CCWGG	2 cut(s)	583, 693
BclI	TGATCA	2 cut(s)	1060, 1129
BcnI	CCSGG	2 cut(s)	168, 1291
BcoDI	GTCTC	3 cut(s)	408, 1028, 1354
BcuI	ACTAGT	2 cut(s)	674, 1799
BfaI	CTAG	6 cut(s)	626, 675, 773, 981, 1587, 1800
BfmI	CTRYAG	1 cut(s)	284
BfoI	RGCGCY	1 cut(s)	666
BfrI	CTTAAG	1 cut(s)	658
BfuAI	ACCTGC	2 cut(s)	318, 389
BmcAI	AGTACT	2 cut(s)	1297, 1582
Bme1390I	CCNGG	4 cut(s)	168, 583, 693, 1291
Bme18I	GGWCC	1 cut(s)	914
BmeT110I	CYCGRG	5 cut(s)	371, 402, 448, 546, 1141
BmgT120I	GGNCC	2 cut(s)	609, 914
BmiI	GGNNCC	3 cut(s)	266, 742, 1093
BmrFI	CCNGG	4 cut(s)	168, 583, 693, 1291
BmsI	GCATC	6 cut(s)	178, 435, 610, 655, 1535, 1740
BpiI	GAAGAC	1 cut(s)	338
BplI	GAGNNNNNCTC	2 cut(s)	473, 505
BpmI	CTGGAG	1 cut(s)	565
Bpu10I	CCTNAGC	1 cut(s)	715
BpuEI	CTTGAG	2 cut(s)	615, 1288
BpuMI	CCSGG	2 cut(s)	168, 1291
BsaBI	GATNNNNATC	1 cut(s)	1065
BsaI	GGTCTC	2 cut(s)	408, 1354
BsaJI	CCNNGG	9 cut(s)	314, 409, 666, 1033, 1096, 1509, 1659, 1669, 1726
BsaWI	WCCGGW	1 cut(s)	1334
BsaXI	ACNNNNNCTCC	4 cut(s)	124, 154, 1671, 1701
Bsc4I	CCNNNNNNNGG	2 cut(s)	33, 1793
Bse118I	RCCGGY	2 cut(s)	422, 1016
Bse1I	ACTGG	1 cut(s)	1350
Bse3DI	GCAATG	1 cut(s)	1217
Bse8I	GATNNNNATC	1 cut(s)	1065
BseBI	CCWGG	2 cut(s)	583, 693
BseDI	CCNNGG	9 cut(s)	314, 409, 666, 1033, 1096, 1509, 1659, 1669, 1726
BseGI	GGATG	3 cut(s)	646, 1151, 1648
BseJI	GATNNNNATC	1 cut(s)	1065
BseLI	CCNNNNNNNGG	2 cut(s)	33, 1793
BseMI	GCAATG	1 cut(s)	1217
BseMII	CTCAG	1 cut(s)	1574
BseNI	ACTGG	1 cut(s)	1350
BseRI	GAGGAG	1 cut(s)	132
BseSI	GKGCMC	2 cut(s)	371, 1807
BseYI	CCCAGC	1 cut(s)	1532
BsgI	GTGCAG	2 cut(s)	120, 1182
Bsh1236I	CGCG	2 cut(s)	1389, 1511
Bsh1285I	CGRYCG	1 cut(s)	1339
BshFI	GGCC	4 cut(s)	26, 611, 720, 1514
BshNI	GGYRCC	1 cut(s)	1091
BsiEI	CGRYCG	1 cut(s)	1339
BsiHKAI	GWGCWC	5 cut(s)	491, 813, 1725, 1745, 1807
BsiHKCI	CYCGRG	5 cut(s)	371, 402, 448, 546, 1141
BsiSI	CCGG	5 cut(s)	168, 423, 1017, 1290, 1335
BslFI	GGGAC	3 cut(s)	602, 790, 1114
BslI	CCNNNNNNNGG	2 cut(s)	33, 1793
BsmAI	GTCTC	3 cut(s)	408, 1028, 1354
BsmFI	GGGAC	3 cut(s)	602, 790, 1114
BsmI	GAATGC	1 cut(s)	1198
BsnI	GGCC	4 cut(s)	26, 611, 720, 1514
Bso31I	GGTCTC	2 cut(s)	408, 1354
BsoBI	CYCGRG	5 cut(s)	371, 402, 448, 546, 1141
Bsp1286I	GDGCHC	9 cut(s)	371, 378, 409, 447, 491, 813, 1725, 1745, 1807
Bsp143I	GATC	8 cut(s)	181, 892, 961, 1060, 1129, 1427, 1537, 1603
Bsp19I	CCATGG	1 cut(s)	666
BspANI	GGCC	4 cut(s)	26, 611, 720, 1514
BspCNI	CTCAG	1 cut(s)	1573
BspFNI	CGCG	2 cut(s)	1389, 1511
BspHI	TCATGA	2 cut(s)	816, 1479
BspLI	GGNNCC	3 cut(s)	266, 742, 1093
BspMI	ACCTGC	2 cut(s)	318, 389
BspPI	GGATC	4 cut(s)	176, 900, 1545, 1611
BspT107I	GGYRCC	1 cut(s)	1091
BspTI	CTTAAG	1 cut(s)	658
BspTNI	GGTCTC	2 cut(s)	408, 1354
BsrBI	CCGCTC	1 cut(s)	1235
BsrDI	GCAATG	1 cut(s)	1217
BsrFI	RCCGGY	2 cut(s)	422, 1016
BsrI	ACTGG	1 cut(s)	1350
BssAI	RCCGGY	2 cut(s)	422, 1016
BssECI	CCNNGG	9 cut(s)	314, 409, 666, 1033, 1096, 1509, 1659, 1669, 1726
BssMI	GATC	8 cut(s)	181, 892, 961, 1060, 1129, 1427, 1537, 1603
BssT1I	CCWWGG	5 cut(s)	666, 1033, 1096, 1659, 1669
Bst2UI	CCWGG	2 cut(s)	583, 693
Bst4CI	ACNGT	3 cut(s)	566, 593, 1727
Bst6I	CTCTTC	4 cut(s)	292, 581, 1166, 1357
BstAFI	CTTAAG	1 cut(s)	658
BstC8I	GCNNGC	2 cut(s)	96, 790
BstDEI	CTNAG	4 cut(s)	531, 715, 1277, 1560
BstDSI	CCRYGG	4 cut(s)	314, 666, 1509, 1726
BstENI	CCTNNNNNAGG	1 cut(s)	1791
BstF5I	GGATG	3 cut(s)	646, 1151, 1648
BstFNI	CGCG	2 cut(s)	1389, 1511
BstH2I	RGCGCY	1 cut(s)	666
BstHHI	GCGC	5 cut(s)	354, 641, 665, 844, 1617
BstKTI	GATC	8 cut(s)	184, 895, 964, 1063, 1132, 1430, 1540, 1606
BstMAI	GTCTC	3 cut(s)	408, 1028, 1354
BstMBI	GATC	8 cut(s)	181, 892, 961, 1060, 1129, 1427, 1537, 1603
BstMCI	CGRYCG	1 cut(s)	1339
BstMWI	GCNNNNNNNGC	5 cut(s)	442, 486, 794, 1263, 1386
BstNI	CCWGG	2 cut(s)	583, 693
BstNSI	RCATGY	2 cut(s)	766, 1445
BstSCI	CCNGG	4 cut(s)	166, 581, 691, 1289
BstSFI	CTRYAG	1 cut(s)	284
BstSLI	GKGCMC	2 cut(s)	371, 1807
BstUI	CGCG	2 cut(s)	1389, 1511
BstV2I	GAAGAC	1 cut(s)	338
BstX2I	RGATCY	1 cut(s)	181
BstXI	CCANNNNNNTGG	1 cut(s)	734
BstYI	RGATCY	1 cut(s)	181
BsuRI	GGCC	4 cut(s)	26, 611, 720, 1514
BtgI	CCRYGG	4 cut(s)	314, 666, 1509, 1726
BtgZI	GCGATG	4 cut(s)	75, 184, 633, 1752
BtsCI	GGATG	3 cut(s)	646, 1151, 1648
BtsI	GCAGTG	2 cut(s)	132, 1805
BtsIMutI	CAGTG	2 cut(s)	132, 1805
BveI	ACCTGC	2 cut(s)	318, 389
Cac8I	GCNNGC	2 cut(s)	96, 790
CciI	TCATGA	2 cut(s)	816, 1479
CfoI	GCGC	5 cut(s)	354, 641, 665, 844, 1617
Cfr10I	RCCGGY	2 cut(s)	422, 1016
Cfr13I	GGNCC	2 cut(s)	609, 914
Cfr42I	CCGCGG	1 cut(s)	1512
CseI	GACGC	2 cut(s)	373, 1114
Csp6I	GTAC	6 cut(s)	553, 570, 1296, 1308, 1557, 1581
CviQI	GTAC	6 cut(s)	553, 570, 1296, 1308, 1557, 1581
DdeI	CTNAG	4 cut(s)	531, 715, 1277, 1560
DpnI	GATC	8 cut(s)	183, 894, 963, 1062, 1131, 1429, 1539, 1605
DpnII	GATC	8 cut(s)	181, 892, 961, 1060, 1129, 1427, 1537, 1603
Eam1104I	CTCTTC	4 cut(s)	292, 581, 1166, 1357
EarI	CTCTTC	4 cut(s)	292, 581, 1166, 1357
Ecl136II	GAGCTC	1 cut(s)	1743
Eco130I	CCWWGG	5 cut(s)	666, 1033, 1096, 1659, 1669
Eco147I	AGGCCT	1 cut(s)	720
Eco24I	GRGCYC	4 cut(s)	378, 409, 447, 1745
Eco31I	GGTCTC	2 cut(s)	408, 1354
Eco47I	GGWCC	1 cut(s)	914
Eco53kI	GAGCTC	1 cut(s)	1743
Eco57I	CTGAAG	1 cut(s)	1208
Eco88I	CYCGRG	5 cut(s)	371, 402, 448, 546, 1141
EcoICRI	GAGCTC	1 cut(s)	1743
EcoNI	CCTNNNNNAGG	1 cut(s)	1791
EcoO109I	RGGNCCY	1 cut(s)	609
EcoRI	GAATTC	1 cut(s)	1168
EcoRII	CCWGG	2 cut(s)	581, 691
EcoT14I	CCWWGG	5 cut(s)	666, 1033, 1096, 1659, 1669
EcoT38I	GRGCYC	4 cut(s)	378, 409, 447, 1745
ErhI	CCWWGG	5 cut(s)	666, 1033, 1096, 1659, 1669
FalI	AAGNNNNNCTT	6 cut(s)	634, 666, 1255, 1287, 1771, 1803
FaqI	GGGAC	3 cut(s)	602, 790, 1114
FauI	CCCGC	1 cut(s)	579
FauNDI	CATATG	3 cut(s)	242, 919, 1203
FbaI	TGATCA	2 cut(s)	1060, 1129
FokI	GGATG	3 cut(s)	633, 1138, 1655
FriOI	GRGCYC	4 cut(s)	378, 409, 447, 1745
FspBI	CTAG	6 cut(s)	626, 675, 773, 981, 1587, 1800
GlaI	GCGC	5 cut(s)	353, 640, 664, 843, 1616
GsaI	CCCAGC	1 cut(s)	1536
GsuI	CTGGAG	1 cut(s)	565
HaeII	RGCGCY	1 cut(s)	666
HaeIII	GGCC	4 cut(s)	26, 611, 720, 1514
HapII	CCGG	5 cut(s)	168, 423, 1017, 1290, 1335
HgaI	GACGC	2 cut(s)	373, 1114
HhaI	GCGC	5 cut(s)	354, 641, 665, 844, 1617
Hin6I	GCGC	5 cut(s)	352, 639, 663, 842, 1615
HinP1I	GCGC	5 cut(s)	352, 639, 663, 842, 1615
HincII	GTYRAC	1 cut(s)	1784
HindII	GTYRAC	1 cut(s)	1784
HindIII	AAGCTT	1 cut(s)	655
HinfI	GANTC	1 cut(s)	820
HpaII	CCGG	5 cut(s)	168, 423, 1017, 1290, 1335
HphI	GGTGA	1 cut(s)	1418
Hpy166II	GTNNAC	4 cut(s)	388, 1409, 1784, 1805
Hpy188I	TCNGA	8 cut(s)	413, 514, 836, 909, 1060, 1116, 1227, 1599
Hpy8I	GTNNAC	4 cut(s)	388, 1409, 1784, 1805
Hpy99I	CGWCG	2 cut(s)	79, 1108
HpyAV	CCTTC	5 cut(s)	37, 514, 622, 660, 834
HpyCH4III	ACNGT	3 cut(s)	566, 593, 1727
HpyCH4IV	ACGT	1 cut(s)	1638
HpyCH4V	TGCA	7 cut(s)	137, 255, 623, 952, 1199, 1805, 1810
HpyF10VI	GCNNNNNNNGC	5 cut(s)	442, 486, 794, 1263, 1386
HpyF3I	CTNAG	4 cut(s)	531, 715, 1277, 1560
HpySE526I	ACGT	1 cut(s)	1638
HspAI	GCGC	5 cut(s)	352, 639, 663, 842, 1615
Ksp22I	TGATCA	2 cut(s)	1060, 1129
KspI	CCGCGG	1 cut(s)	1512
Kzo9I	GATC	8 cut(s)	181, 892, 961, 1060, 1129, 1427, 1537, 1603
LmnI	GCTCC	5 cut(s)	115, 274, 294, 494, 1511
LweI	GCATC	6 cut(s)	178, 435, 610, 655, 1535, 1740
MaeI	CTAG	6 cut(s)	626, 675, 773, 981, 1587, 1800
MaeII	ACGT	1 cut(s)	1638
MaeIII	GTNAC	2 cut(s)	936, 983
MalI	GATC	8 cut(s)	183, 894, 963, 1062, 1131, 1429, 1539, 1605
MbiI	CCGCTC	1 cut(s)	1235
MboI	GATC	8 cut(s)	181, 892, 961, 1060, 1129, 1427, 1537, 1603
MflI	RGATCY	1 cut(s)	181
MhlI	GDGCHC	9 cut(s)	371, 378, 409, 447, 491, 813, 1725, 1745, 1807
MluCI	AATT	6 cut(s)	114, 803, 856, 1054, 1168, 1652
MmeI	TCCRAC	2 cut(s)	200, 1657
MseI	TTAA	6 cut(s)	221, 323, 659, 1029, 1475, 1655
MslI	CAYNNNNRTG	2 cut(s)	1736, 1810
MspA1I	CMGCKG	3 cut(s)	558, 1511, 1532
MspCI	CTTAAG	1 cut(s)	658
MspI	CCGG	5 cut(s)	168, 423, 1017, 1290, 1335
MspR9I	CCNGG	4 cut(s)	168, 583, 693, 1291
Mva1269I	GAATGC	1 cut(s)	1198
MvaI	CCWGG	2 cut(s)	583, 693
MvnI	CGCG	2 cut(s)	1389, 1511
MwoI	GCNNNNNNNGC	5 cut(s)	442, 486, 794, 1263, 1386
NciI	CCSGG	2 cut(s)	168, 1291
NcoI	CCATGG	1 cut(s)	666
NdeI	CATATG	3 cut(s)	242, 919, 1203
NdeII	GATC	8 cut(s)	181, 892, 961, 1060, 1129, 1427, 1537, 1603
NlaIV	GGNNCC	3 cut(s)	266, 742, 1093
NspI	RCATGY	2 cut(s)	766, 1445
PaeR7I	CTCGAG	3 cut(s)	402, 448, 546
PagI	TCATGA	2 cut(s)	816, 1479
PaqCI	CACCTGC	1 cut(s)	389
PceI	AGGCCT	1 cut(s)	720
PciI	ACATGT	1 cut(s)	762
PcsI	WCGNNNNNNNCGW	1 cut(s)	1112
PctI	GAATGC	1 cut(s)	1198
PfeI	GAWTC	1 cut(s)	820
PfoI	TCCNGGA	1 cut(s)	691
PscI	ACATGT	1 cut(s)	762
PshBI	ATTAAT	1 cut(s)	1475
Psp124BI	GAGCTC	1 cut(s)	1745
Psp6I	CCWGG	2 cut(s)	581, 691
PspFI	CCCAGC	1 cut(s)	1532
PspGI	CCWGG	2 cut(s)	581, 691
PspN4I	GGNNCC	3 cut(s)	266, 742, 1093
PspPI	GGNCC	2 cut(s)	609, 914
PsuI	RGATCY	1 cut(s)	181
PvuII	CAGCTG	1 cut(s)	1532
RsaI	GTAC	6 cut(s)	554, 571, 1297, 1309, 1558, 1582
RsaNI	GTAC	6 cut(s)	553, 570, 1296, 1308, 1557, 1581
RseI	CAYNNNNRTG	2 cut(s)	1736, 1810
SacI	GAGCTC	1 cut(s)	1745
SacII	CCGCGG	1 cut(s)	1512
SaqAI	TTAA	6 cut(s)	221, 323, 659, 1029, 1475, 1655
Sau3AI	GATC	8 cut(s)	181, 892, 961, 1060, 1129, 1427, 1537, 1603
Sau96I	GGNCC	2 cut(s)	609, 914
ScaI	AGTACT	2 cut(s)	1297, 1582
ScrFI	CCNGG	4 cut(s)	168, 583, 693, 1291
SduI	GDGCHC	9 cut(s)	371, 378, 409, 447, 491, 813, 1725, 1745, 1807
SfaNI	GCATC	6 cut(s)	178, 435, 610, 655, 1535, 1740
SfcI	CTRYAG	1 cut(s)	284
Sfr274I	CTCGAG	3 cut(s)	402, 448, 546
Sfr303I	CCGCGG	1 cut(s)	1512
SgrBI	CCGCGG	1 cut(s)	1512
SinI	GGWCC	1 cut(s)	914
SlaI	CTCGAG	3 cut(s)	402, 448, 546
SmiMI	CAYNNNNRTG	2 cut(s)	1736, 1810
SmlI	CTYRAG	6 cut(s)	402, 448, 546, 630, 658, 1303
SmoI	CTYRAG	6 cut(s)	402, 448, 546, 630, 658, 1303
SpeI	ACTAGT	2 cut(s)	674, 1799
Sse9I	AATT	6 cut(s)	114, 803, 856, 1054, 1168, 1652
SseBI	AGGCCT	1 cut(s)	720
SspMI	CTAG	6 cut(s)	626, 675, 773, 981, 1587, 1800
SstI	GAGCTC	1 cut(s)	1745
StuI	AGGCCT	1 cut(s)	720
StyD4I	CCNGG	4 cut(s)	166, 581, 691, 1289
StyI	CCWWGG	5 cut(s)	666, 1033, 1096, 1659, 1669
TaaI	ACNGT	3 cut(s)	566, 593, 1727
TaiI	ACGT	1 cut(s)	1641
TaqI	TCGA	6 cut(s)	403, 441, 449, 547, 863, 1046
TasI	AATT	6 cut(s)	114, 803, 856, 1054, 1168, 1652
TatI	WGTACW	3 cut(s)	1295, 1307, 1580
TauI	GCSGC	5 cut(s)	8, 543, 1235, 1389, 1514
TfiI	GAWTC	1 cut(s)	820
Tru1I	TTAA	6 cut(s)	221, 323, 659, 1029, 1475, 1655
Tru9I	TTAA	6 cut(s)	221, 323, 659, 1029, 1475, 1655
TscAI	CASTG	2 cut(s)	139, 1812
TspDTI	ATGAA	7 cut(s)	6, 229, 586, 833, 1205, 1467, 1496
TspGWI	ACGGA	1 cut(s)	474
TspRI	CASTG	2 cut(s)	139, 1812
Vha464I	CTTAAG	1 cut(s)	658
VneI	GTGCAC	1 cut(s)	1803
VpaK11BI	GGWCC	1 cut(s)	914
VspI	ATTAAT	1 cut(s)	1475
XagI	CCTNNNNNAGG	1 cut(s)	1791
XapI	RAATTY	2 cut(s)	803, 1168
XceI	RCATGY	2 cut(s)	766, 1445
XcmI	CCANNNNNNNNNTGG	1 cut(s)	220
XhoI	CTCGAG	3 cut(s)	402, 448, 546
XspI	CTAG	6 cut(s)	626, 675, 773, 981, 1587, 1800
ZrmI	AGTACT	2 cut(s)	1297, 1582

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.