Belongs to the peptidase A1 family
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G20015 |
| fragaria_vesca | FvH4_4g37260 |
| malus_domestica | MD00G1127200.v1.1 MD13G1002100.v1.1 |
| prunus_persica | Prupe.1G350500_v2.0.a1 |
| pyrus_communis | pycom13g00180 pycom16g00070 |
| rosa_chinensis | RchiOBHm_Chr4g0447081 |
| rosa_laevigata | RLG00000005607 |
| rosa_roxburghii | Rroxscaffold_5G00387390 |
| rosa_rugosa | Rorug04G0377800 |
| rosa_samantha | Rh4AG439100 Rh4BG448100 Rh4CG465200 Rh4DG446600 |
| rosa_wichuraiana | Rw4G037560 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 1207 |
| AccB1I | GGYRCC | 4 cut(s) | 429, 1207, 1265, 1411 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 865 |
| AccIII | TCCGGA | 2 cut(s) | 611, 1140 |
| AclWI | GGATC | 2 cut(s) | 572, 1132 |
| AcoI | YGGCCR | 6 cut(s) | 358, 736, 867, 880, 967, 1467 |
| AcyI | GRCGYC | 1 cut(s) | 430 |
| AfaI | GTAC | 6 cut(s) | 12, 36, 127, 265, 1024, 1209 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 177, 781, 792, 865, 1278, 1291, 1354, 1536 |
| AflIII | ACRYGT | 1 cut(s) | 13 |
| AgsI | TTSAA | 1 cut(s) | 157 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1622 |
| AhlI | ACTAGT | 1 cut(s) | 37 |
| AjnI | CCWGG | 1 cut(s) | 751 |
| AluBI | AGCT | 3 cut(s) | 212, 723, 961 |
| AluI | AGCT | 3 cut(s) | 212, 723, 961 |
| Alw21I | GWGCWC | 1 cut(s) | 851 |
| Alw26I | GTCTC | 4 cut(s) | 315, 718, 824, 1366 |
| AlwI | GGATC | 2 cut(s) | 572, 1132 |
| Ama87I | CYCGRG | 4 cut(s) | 827, 1156, 1354, 1435 |
| Aor13HI | TCCGGA | 2 cut(s) | 611, 1140 |
| ApaI | GGGCCC | 3 cut(s) | 942, 1012, 1156 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 662, 694 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 506 |
| Asp718I | GGTACC | 1 cut(s) | 1207 |
| AspLEI | GCGC | 2 cut(s) | 89, 432 |
| AsuC2I | CCSGG | 3 cut(s) | 1007, 1310, 1537 |
| AsuHPI | GGTGA | 3 cut(s) | 316, 335, 1450 |
| AsuNHI | GCTAGC | 1 cut(s) | 416 |
| AvaI | CYCGRG | 4 cut(s) | 827, 1156, 1354, 1435 |
| AvaII | GGWCC | 6 cut(s) | 180, 631, 801, 1129, 1448, 1616 |
| BaeGI | GKGCMC | 6 cut(s) | 818, 942, 1012, 1156, 1268, 1416 |
| BalI | TGGCCA | 1 cut(s) | 869 |
| BanI | GGYRCC | 4 cut(s) | 429, 1207, 1265, 1411 |
| BanII | GRGCYC | 4 cut(s) | 581, 942, 1012, 1156 |
| BbsI | GAAGAC | 1 cut(s) | 1227 |
| Bbv12I | GWGCWC | 1 cut(s) | 851 |
| BccI | CCATC | 7 cut(s) | 125, 878, 1249, 1373, 1460, 1540, 1583 |
| BceAI | ACGGC | 3 cut(s) | 222, 367, 1256 |
| BciT130I | CCWGG | 1 cut(s) | 753 |
| BcnI | CCSGG | 3 cut(s) | 1007, 1310, 1537 |
| BcoDI | GTCTC | 4 cut(s) | 315, 718, 824, 1366 |
| BcuI | ACTAGT | 1 cut(s) | 37 |
| BfaI | CTAG | 4 cut(s) | 38, 267, 417, 1029 |
| BfmI | CTRYAG | 2 cut(s) | 51, 718 |
| BfoI | RGCGCY | 1 cut(s) | 433 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 975 |
| BmcAI | AGTACT | 2 cut(s) | 127, 265 |
| Bme1390I | CCNGG | 4 cut(s) | 753, 1007, 1310, 1537 |
| Bme18I | GGWCC | 6 cut(s) | 180, 631, 801, 1129, 1448, 1616 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1622 |
| BmeT110I | CYCGRG | 4 cut(s) | 827, 1156, 1354, 1435 |
| BmrFI | CCNGG | 4 cut(s) | 753, 1007, 1310, 1537 |
| BmsI | GCATC | 5 cut(s) | 391, 761, 1098, 1191, 1581 |
| BmtI | GCTAGC | 1 cut(s) | 420 |
| BpiI | GAAGAC | 1 cut(s) | 1227 |
| BpmI | CTGGAG | 1 cut(s) | 728 |
| BpuMI | CCSGG | 3 cut(s) | 1007, 1310, 1537 |
| BsaAI | YACGTR | 1 cut(s) | 14 |
| BsaHI | GRCGYC | 1 cut(s) | 430 |
| BsaJI | CCNNGG | 4 cut(s) | 751, 1113, 1148, 1353 |
| BsaWI | WCCGGW | 4 cut(s) | 345, 611, 1140, 1486 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 770, 800, 1236, 1266 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 177, 781, 792, 865, 1278, 1291, 1354, 1536 |
| Bse118I | RCCGGY | 2 cut(s) | 965, 974 |
| Bse1I | ACTGG | 4 cut(s) | 261, 634, 652, 664 |
| BseAI | TCCGGA | 2 cut(s) | 611, 1140 |
| BseBI | CCWGG | 1 cut(s) | 753 |
| BseDI | CCNNGG | 4 cut(s) | 751, 1113, 1148, 1353 |
| BseGI | GGATG | 8 cut(s) | 117, 406, 855, 1206, 1452, 1498, 1532, 1572 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 177, 781, 792, 865, 1278, 1291, 1354, 1536 |
| BseMII | CTCAG | 1 cut(s) | 741 |
| BseNI | ACTGG | 4 cut(s) | 261, 634, 652, 664 |
| BseSI | GKGCMC | 6 cut(s) | 818, 942, 1012, 1156, 1268, 1416 |
| BseYI | CCCAGC | 1 cut(s) | 685 |
| BsgI | GTGCAG | 1 cut(s) | 198 |
| BshNI | GGYRCC | 4 cut(s) | 429, 1207, 1265, 1411 |
| BsiHKAI | GWGCWC | 1 cut(s) | 851 |
| BsiHKCI | CYCGRG | 4 cut(s) | 827, 1156, 1354, 1435 |
| BsiWI | CGTACG | 1 cut(s) | 10 |
| BslFI | GGGAC | 4 cut(s) | 193, 809, 1115, 1325 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 177, 781, 792, 865, 1278, 1291, 1354, 1536 |
| BsmAI | GTCTC | 4 cut(s) | 315, 718, 824, 1366 |
| BsmFI | GGGAC | 4 cut(s) | 193, 809, 1115, 1325 |
| BsoBI | CYCGRG | 4 cut(s) | 827, 1156, 1354, 1435 |
| Bsp120I | GGGCCC | 3 cut(s) | 938, 1008, 1152 |
| Bsp1286I | GDGCHC | 8 cut(s) | 581, 818, 851, 942, 1012, 1156, 1268, 1416 |
| Bsp13I | TCCGGA | 2 cut(s) | 611, 1140 |
| Bsp143I | GATC | 3 cut(s) | 564, 675, 1137 |
| BspCNI | CTCAG | 1 cut(s) | 740 |
| BspEI | TCCGGA | 2 cut(s) | 611, 1140 |
| BspMAI | CTGCAG | 2 cut(s) | 55, 722 |
| BspOI | GCTAGC | 1 cut(s) | 420 |
| BspPI | GGATC | 2 cut(s) | 572, 1132 |
| BspQI | GCTCTTC | 1 cut(s) | 68 |
| BspT107I | GGYRCC | 4 cut(s) | 429, 1207, 1265, 1411 |
| BsrFI | RCCGGY | 2 cut(s) | 965, 974 |
| BsrI | ACTGG | 4 cut(s) | 261, 634, 652, 664 |
| BssAI | RCCGGY | 2 cut(s) | 965, 974 |
| BssECI | CCNNGG | 4 cut(s) | 751, 1113, 1148, 1353 |
| BssMI | GATC | 3 cut(s) | 564, 675, 1137 |
| BssNI | GRCGYC | 1 cut(s) | 430 |
| Bst2UI | CCWGG | 1 cut(s) | 753 |
| Bst4CI | ACNGT | 3 cut(s) | 1291, 1394, 1420 |
| Bst6I | CTCTTC | 1 cut(s) | 68 |
| BstACI | GRCGYC | 1 cut(s) | 430 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1509 |
| BstBAI | YACGTR | 1 cut(s) | 14 |
| BstDEI | CTNAG | 3 cut(s) | 434, 727, 997 |
| BstDSI | CCRYGG | 2 cut(s) | 1113, 1148 |
| BstF5I | GGATG | 8 cut(s) | 117, 406, 855, 1206, 1452, 1498, 1532, 1572 |
| BstH2I | RGCGCY | 1 cut(s) | 433 |
| BstHHI | GCGC | 2 cut(s) | 89, 432 |
| BstKTI | GATC | 3 cut(s) | 567, 678, 1140 |
| BstMAI | GTCTC | 4 cut(s) | 315, 718, 824, 1366 |
| BstMBI | GATC | 3 cut(s) | 564, 675, 1137 |
| BstNI | CCWGG | 1 cut(s) | 753 |
| BstNSI | RCATGY | 1 cut(s) | 901 |
| BstSCI | CCNGG | 4 cut(s) | 751, 1005, 1308, 1535 |
| BstSFI | CTRYAG | 2 cut(s) | 51, 718 |
| BstSLI | GKGCMC | 6 cut(s) | 818, 942, 1012, 1156, 1268, 1416 |
| BstV2I | GAAGAC | 1 cut(s) | 1227 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 752 |
| BtgI | CCRYGG | 2 cut(s) | 1113, 1148 |
| BtgZI | GCGATG | 1 cut(s) | 1121 |
| BtsCI | GGATG | 8 cut(s) | 117, 406, 855, 1206, 1452, 1498, 1532, 1572 |
| BtsI | GCAGTG | 3 cut(s) | 60, 255, 1024 |
| BtsIMutI | CAGTG | 6 cut(s) | 60, 255, 641, 659, 1024, 1035 |
| CfoI | GCGC | 2 cut(s) | 89, 432 |
| Cfr10I | RCCGGY | 2 cut(s) | 965, 974 |
| CseI | GACGC | 2 cut(s) | 1052, 1322 |
| Csp6I | GTAC | 6 cut(s) | 11, 35, 126, 264, 1023, 1208 |
| CviAII | CATG | 6 cut(s) | 368, 383, 391, 761, 898, 943 |
| CviQI | GTAC | 6 cut(s) | 11, 35, 126, 264, 1023, 1208 |
| DdeI | CTNAG | 3 cut(s) | 434, 727, 997 |
| DinI | GGCGCC | 1 cut(s) | 431 |
| DpnI | GATC | 3 cut(s) | 566, 677, 1139 |
| DpnII | GATC | 3 cut(s) | 564, 675, 1137 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1622 |
| EaeI | YGGCCR | 6 cut(s) | 358, 736, 867, 880, 967, 1467 |
| Eam1104I | CTCTTC | 1 cut(s) | 68 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1622 |
| EarI | CTCTTC | 1 cut(s) | 68 |
| EciI | GGCGGA | 1 cut(s) | 1086 |
| Eco147I | AGGCCT | 1 cut(s) | 785 |
| Eco24I | GRGCYC | 4 cut(s) | 581, 942, 1012, 1156 |
| Eco32I | GATATC | 2 cut(s) | 330, 622 |
| Eco47I | GGWCC | 6 cut(s) | 180, 631, 801, 1129, 1448, 1616 |
| Eco88I | CYCGRG | 4 cut(s) | 827, 1156, 1354, 1435 |
| EcoO109I | RGGNCCY | 3 cut(s) | 801, 1129, 1153 |
| EcoRII | CCWGG | 1 cut(s) | 751 |
| EcoRV | GATATC | 2 cut(s) | 330, 622 |
| EcoT38I | GRGCYC | 4 cut(s) | 581, 942, 1012, 1156 |
| EgeI | GGCGCC | 1 cut(s) | 431 |
| EheI | GGCGCC | 1 cut(s) | 431 |
| FaeI | CATG | 6 cut(s) | 371, 386, 394, 764, 901, 946 |
| FaqI | GGGAC | 4 cut(s) | 193, 809, 1115, 1325 |
| FatI | CATG | 6 cut(s) | 367, 382, 390, 760, 897, 942 |
| FauI | CCCGC | 7 cut(s) | 169, 757, 1019, 1092, 1174, 1197, 1435 |
| FauNDI | CATATG | 1 cut(s) | 885 |
| FokI | GGATG | 8 cut(s) | 104, 413, 842, 1213, 1439, 1505, 1519, 1559 |
| FriOI | GRGCYC | 4 cut(s) | 581, 942, 1012, 1156 |
| FspBI | CTAG | 4 cut(s) | 38, 267, 417, 1029 |
| GlaI | GCGC | 2 cut(s) | 88, 431 |
| GsaI | CCCAGC | 1 cut(s) | 689 |
| GsuI | CTGGAG | 1 cut(s) | 728 |
| HaeII | RGCGCY | 1 cut(s) | 433 |
| HgaI | GACGC | 2 cut(s) | 1052, 1322 |
| HhaI | GCGC | 2 cut(s) | 89, 432 |
| Hin1I | GRCGYC | 1 cut(s) | 430 |
| Hin1II | CATG | 6 cut(s) | 371, 386, 394, 764, 901, 946 |
| Hin6I | GCGC | 2 cut(s) | 87, 430 |
| HinP1I | GCGC | 2 cut(s) | 87, 430 |
| HincII | GTYRAC | 1 cut(s) | 641 |
| HindII | GTYRAC | 1 cut(s) | 641 |
| HinfI | GANTC | 6 cut(s) | 608, 711, 832, 889, 1359, 1611 |
| HphI | GGTGA | 3 cut(s) | 316, 335, 1450 |
| Hpy166II | GTNNAC | 3 cut(s) | 316, 641, 1448 |
| Hpy188I | TCNGA | 7 cut(s) | 517, 564, 569, 670, 1137, 1219, 1616 |
| Hpy188III | TCNNGA | 9 cut(s) | 149, 612, 745, 829, 859, 1141, 1285, 1356, 1576 |
| Hpy8I | GTNNAC | 3 cut(s) | 316, 641, 1448 |
| Hpy99I | CGWCG | 2 cut(s) | 1046, 1291 |
| HpyAV | CCTTC | 7 cut(s) | 295, 301, 484, 496, 1235, 1472, 1536 |
| HpyCH4III | ACNGT | 3 cut(s) | 1291, 1394, 1420 |
| HpyCH4IV | ACGT | 6 cut(s) | 13, 159, 222, 375, 839, 864 |
| HpyCH4V | TGCA | 6 cut(s) | 53, 215, 386, 404, 720, 1517 |
| HpyF3I | CTNAG | 3 cut(s) | 434, 727, 997 |
| HpySE526I | ACGT | 6 cut(s) | 13, 159, 222, 375, 839, 864 |
| Hsp92I | GRCGYC | 1 cut(s) | 430 |
| Hsp92II | CATG | 6 cut(s) | 371, 386, 394, 764, 901, 946 |
| HspAI | GCGC | 2 cut(s) | 87, 430 |
| KasI | GGCGCC | 1 cut(s) | 429 |
| KflI | GGGWCCC | 1 cut(s) | 1129 |
| Kpn2I | TCCGGA | 2 cut(s) | 611, 1140 |
| KpnI | GGTACC | 1 cut(s) | 1211 |
| KroI | GCCGGC | 1 cut(s) | 965 |
| KroNI | GCCGGC | 1 cut(s) | 967 |
| Kzo9I | GATC | 3 cut(s) | 564, 675, 1137 |
| LguI | GCTCTTC | 1 cut(s) | 68 |
| LmnI | GCTCC | 7 cut(s) | 535, 576, 728, 846, 908, 1528, 1592 |
| LweI | GCATC | 5 cut(s) | 391, 761, 1098, 1191, 1581 |
| MaeI | CTAG | 4 cut(s) | 38, 267, 417, 1029 |
| MaeII | ACGT | 6 cut(s) | 13, 159, 222, 375, 839, 864 |
| MaeIII | GTNAC | 4 cut(s) | 223, 656, 1031, 1273 |
| MalI | GATC | 3 cut(s) | 566, 677, 1139 |
| MboI | GATC | 3 cut(s) | 564, 675, 1137 |
| MboII | GAAGA | 4 cut(s) | 55, 58, 61, 1232 |
| MhlI | GDGCHC | 8 cut(s) | 581, 818, 851, 942, 1012, 1156, 1268, 1416 |
| MlsI | TGGCCA | 1 cut(s) | 869 |
| MluCI | AATT | 4 cut(s) | 75, 1061, 1474, 1482 |
| MluNI | TGGCCA | 1 cut(s) | 869 |
| Mly113I | GGCGCC | 1 cut(s) | 430 |
| MlyI | GAGTC | 4 cut(s) | 602, 720, 826, 1368 |
| MmeI | TCCRAC | 4 cut(s) | 495, 693, 1174, 1359 |
| Mox20I | TGGCCA | 1 cut(s) | 869 |
| MroI | TCCGGA | 2 cut(s) | 611, 1140 |
| MroNI | GCCGGC | 1 cut(s) | 965 |
| MroXI | GAANNNNTTC | 1 cut(s) | 506 |
| MscI | TGGCCA | 1 cut(s) | 869 |
| MseI | TTAA | 1 cut(s) | 42 |
| MslI | CAYNNNNRTG | 2 cut(s) | 366, 902 |
| Msp20I | TGGCCA | 1 cut(s) | 869 |
| MspA1I | CMGCKG | 2 cut(s) | 212, 914 |
| MspR9I | CCNGG | 4 cut(s) | 753, 1007, 1310, 1537 |
| MvaI | CCWGG | 1 cut(s) | 753 |
| NaeI | GCCGGC | 1 cut(s) | 967 |
| NarI | GGCGCC | 1 cut(s) | 430 |
| NciI | CCSGG | 3 cut(s) | 1007, 1310, 1537 |
| NdeI | CATATG | 1 cut(s) | 885 |
| NdeII | GATC | 3 cut(s) | 564, 675, 1137 |
| NgoMIV | GCCGGC | 1 cut(s) | 965 |
| NheI | GCTAGC | 1 cut(s) | 416 |
| NlaIII | CATG | 6 cut(s) | 371, 386, 394, 764, 901, 946 |
| NmuCI | GTSAC | 3 cut(s) | 223, 1031, 1273 |
| NspI | RCATGY | 1 cut(s) | 901 |
| PaeR7I | CTCGAG | 1 cut(s) | 827 |
| PceI | AGGCCT | 1 cut(s) | 785 |
| PciSI | GCTCTTC | 1 cut(s) | 68 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1236 |
| PdiI | GCCGGC | 1 cut(s) | 967 |
| PdmI | GAANNNNTTC | 1 cut(s) | 506 |
| PfeI | GAWTC | 2 cut(s) | 889, 1611 |
| Pfl23II | CGTACG | 1 cut(s) | 10 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 865 |
| PfoI | TCCNGGA | 1 cut(s) | 1308 |
| PleI | GAGTC | 4 cut(s) | 602, 719, 826, 1367 |
| PluTI | GGCGCC | 1 cut(s) | 433 |
| PpsI | GAGTC | 4 cut(s) | 602, 719, 826, 1367 |
| Ppu21I | YACGTR | 1 cut(s) | 14 |
| PpuMI | RGGWCCY | 2 cut(s) | 801, 1129 |
| Psp5II | RGGWCCY | 2 cut(s) | 801, 1129 |
| Psp6I | CCWGG | 1 cut(s) | 751 |
| PspFI | CCCAGC | 1 cut(s) | 685 |
| PspGI | CCWGG | 1 cut(s) | 751 |
| PspLI | CGTACG | 1 cut(s) | 10 |
| PspOMI | GGGCCC | 3 cut(s) | 938, 1008, 1152 |
| PspPPI | RGGWCCY | 2 cut(s) | 801, 1129 |
| PstI | CTGCAG | 2 cut(s) | 55, 722 |
| PvuII | CAGCTG | 1 cut(s) | 212 |
| RsaI | GTAC | 6 cut(s) | 12, 36, 127, 265, 1024, 1209 |
| RsaNI | GTAC | 6 cut(s) | 11, 35, 126, 264, 1023, 1208 |
| RseI | CAYNNNNRTG | 2 cut(s) | 366, 902 |
| SapI | GCTCTTC | 1 cut(s) | 68 |
| SaqAI | TTAA | 1 cut(s) | 42 |
| Sau3AI | GATC | 3 cut(s) | 564, 675, 1137 |
| ScaI | AGTACT | 2 cut(s) | 127, 265 |
| SchI | GAGTC | 4 cut(s) | 602, 720, 826, 1368 |
| ScrFI | CCNGG | 4 cut(s) | 753, 1007, 1310, 1537 |
| SduI | GDGCHC | 8 cut(s) | 581, 818, 851, 942, 1012, 1156, 1268, 1416 |
| SfaNI | GCATC | 5 cut(s) | 391, 761, 1098, 1191, 1581 |
| SfcI | CTRYAG | 2 cut(s) | 51, 718 |
| SfoI | GGCGCC | 1 cut(s) | 431 |
| Sfr274I | CTCGAG | 1 cut(s) | 827 |
| SinI | GGWCC | 6 cut(s) | 180, 631, 801, 1129, 1448, 1616 |
| SlaI | CTCGAG | 1 cut(s) | 827 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 366, 902 |
| SmlI | CTYRAG | 1 cut(s) | 827 |
| SmoI | CTYRAG | 1 cut(s) | 827 |
| SpeI | ACTAGT | 1 cut(s) | 37 |
| Sse9I | AATT | 4 cut(s) | 75, 1061, 1474, 1482 |
| SseBI | AGGCCT | 1 cut(s) | 785 |
| SspDI | GGCGCC | 1 cut(s) | 429 |
| SspMI | CTAG | 4 cut(s) | 38, 267, 417, 1029 |
| StuI | AGGCCT | 1 cut(s) | 785 |
| StyD4I | CCNGG | 4 cut(s) | 751, 1005, 1308, 1535 |
| TaaI | ACNGT | 3 cut(s) | 1291, 1394, 1420 |
| TaiI | ACGT | 6 cut(s) | 16, 162, 225, 378, 842, 867 |
| TaqI | TCGA | 3 cut(s) | 769, 828, 1587 |
| TasI | AATT | 4 cut(s) | 75, 1061, 1474, 1482 |
| TatI | WGTACW | 2 cut(s) | 125, 263 |
| TfiI | GAWTC | 2 cut(s) | 889, 1611 |
| Tru1I | TTAA | 1 cut(s) | 42 |
| Tru9I | TTAA | 1 cut(s) | 42 |
| TscAI | CASTG | 6 cut(s) | 60, 262, 641, 659, 1024, 1042 |
| TseFI | GTSAC | 3 cut(s) | 223, 1031, 1273 |
| Tsp45I | GTSAC | 3 cut(s) | 223, 1031, 1273 |
| TspDTI | ATGAA | 4 cut(s) | 203, 407, 902, 1572 |
| TspGWI | ACGGA | 1 cut(s) | 824 |
| TspRI | CASTG | 6 cut(s) | 60, 262, 641, 659, 1024, 1042 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 865 |
| VpaK11BI | GGWCC | 6 cut(s) | 180, 631, 801, 1129, 1448, 1616 |
| XceI | RCATGY | 1 cut(s) | 901 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 949, 1603 |
| XhoI | CTCGAG | 1 cut(s) | 827 |
| XmnI | GAANNNNTTC | 1 cut(s) | 506 |
| XspI | CTAG | 4 cut(s) | 38, 267, 417, 1029 |
| ZrmI | AGTACT | 2 cut(s) | 127, 265 |