Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0014420

Physical Location & Seq

Genomic Coordinates Forward (+)

33177124 .. 33178017

Gene Structure 894 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G358900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 501 bp

ATGGCCACTGTCACCCCCGCCGCCGTTGCAATCCCATCATTCGCCGGCCTCAAGTCCGCCGGTGCATCCAAGGTCTGCAGCGCCGCCGTTAAGTTTGCAGCCTCCCCGAGGATGTGTGCCATCAAGTCCTCACTTAAGGATGTGGGCGTGGCCGTAGCAGCCACTGCAGCAAGTGCAATCTTGGCAAGCAATGCCTTGGCCATTGAGGTGTTGCTCGGCGGCGATGACGGTTCCTTGGCTTTCATCCCCAACAGCTTCTCAGTCAGCCCAGGAGAGAAGATTGTGTTCAAGAACAATGCTGGATTCCCACACAACATTGTGTTCGACGAGGACGAGATTCCCAGCGGTGTGGATGCTGGAAAGATCTCCATGGGCGAGGAGGACCTCCTCAATGCCCCAGGGGAGACATACGCCATCACCTTGACTGAGAAAGGTTCCTATGCTTTCTACTGTTCTCCTCACCAGGGAGCCGGCATGATCGGCAAAGTCACCGTTAACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006091 GO:0006417 GO:0008150 GO:0008152 GO:0009055 GO:0009507 GO:0009532 GO:0009534 GO:0009536 GO:0009570 GO:0009579 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010035 GO:0010038 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010608 GO:0010629 GO:0016020 GO:0016491 GO:0017148 GO:0019222 GO:0019904 GO:0022900 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031976 GO:0031977 GO:0031984 GO:0032268 GO:0032269 GO:0034248 GO:0034249 GO:0034357 GO:0042221 GO:0042592 GO:0042651 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0046028 GO:0046688 GO:0048519 GO:0048523 GO:0048878 GO:0050789 GO:0050794 GO:0050801 GO:0050896 GO:0051171 GO:0051172 GO:0051246 GO:0051248 GO:0055035 GO:0055065 GO:0055070 GO:0055076 GO:0055080 GO:0055114 GO:0060255 GO:0065007 GO:0065008 GO:0080090 GO:0098771 GO:2000112 GO:2000113

KEGG Pathways

Metabolic & Signaling

ko00195 map00195

Pfam Domains

Protein Families

Copper-bind

Protein Analysis

167

Amino Acids

16.73

Weight (kDa)

5.06

Isoelectric Point (pI)

33.36

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014420)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G20340
fragaria_vesca	FvH4_2g37890
malus_domestica	MD08G1007200.v1.1 MD15G1006300.v1.1
prunus_persica	Prupe.1G358900_v2.0.a1
pyrus_communis	pycom15g00470
rosa_chinensis	RchiOBHm_Chr6g0303721
rosa_laevigata	RLG00000011052
rosa_multiflora	Rmu_co8452585.1_g000002 Rmu_sc0001024.1_g000002
rosa_roxburghii	Rroxscaffold_7G00164450
rosa_rugosa	Rorug06G0324300
rosa_samantha	Rh6AG438600 Rh6BG464600 Rh6CG450900 Rh6DG437600
rosa_wichuraiana	Rw6G037960

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AciI	CCGC	6 cut(s)	18, 21, 57, 84, 219, 345
AcoI	YGGCCR	3 cut(s)	3, 150, 198
AfiI	CCNNNNNNNGG	2 cut(s)	108, 464
AflII	CTTAAG	1 cut(s)	134
AgsI	TTSAA	1 cut(s)	289
AjnI	CCWGG	3 cut(s)	268, 397, 462
AluBI	AGCT	1 cut(s)	255
AluI	AGCT	1 cut(s)	255
Alw26I	GTCTC	1 cut(s)	398
AlwNI	CAGNNNCTG	1 cut(s)	164
Ama87I	CYCGRG	1 cut(s)	106
AoxI	GGCC	4 cut(s)	3, 46, 150, 198
ApeKI	GCWGC	4 cut(s)	78, 98, 158, 167
AspLEI	GCGC	1 cut(s)	83
AspS9I	GGNCC	1 cut(s)	382
AsuHPI	GGTGA	4 cut(s)	4, 409, 452, 481
AvaI	CYCGRG	1 cut(s)	106
AvaII	GGWCC	1 cut(s)	382
BalI	TGGCCA	2 cut(s)	5, 200
BbvI	GCAGC	4 cut(s)	90, 110, 170, 179
BccI	CCATC	3 cut(s)	43, 128, 422
BceAI	ACGGC	3 cut(s)	8, 71, 137
BciT130I	CCWGG	3 cut(s)	270, 399, 464
BcoDI	GTCTC	1 cut(s)	398
BfmI	CTRYAG	2 cut(s)	76, 165
BfoI	RGCGCY	1 cut(s)	84
BfrI	CTTAAG	1 cut(s)	134
BglII	AGATCT	1 cut(s)	363
BisI	GCNGC	7 cut(s)	21, 79, 84, 99, 159, 168, 220
BlsI	GCNGC	7 cut(s)	22, 80, 85, 100, 160, 169, 221
Bme1390I	CCNGG	3 cut(s)	270, 399, 464
Bme18I	GGWCC	1 cut(s)	382
BmeT110I	CYCGRG	1 cut(s)	106
BmgT120I	GGNCC	1 cut(s)	382
BmiI	GGNNCC	3 cut(s)	232, 436, 469
BmrFI	CCNGG	3 cut(s)	270, 399, 464
BmsI	GCATC	2 cut(s)	74, 343
BpuEI	CTTGAG	1 cut(s)	35
BsaJI	CCNNGG	9 cut(s)	69, 107, 195, 234, 268, 369, 397, 398, 463
Bsc4I	CCNNNNNNNGG	2 cut(s)	108, 464
Bse118I	RCCGGY	3 cut(s)	44, 59, 470
Bse3DI	GCAATG	1 cut(s)	196
BseBI	CCWGG	3 cut(s)	270, 399, 464
BseDI	CCNNGG	9 cut(s)	69, 107, 195, 234, 268, 369, 397, 398, 463
BseGI	GGATG	5 cut(s)	65, 117, 145, 243, 358
BseLI	CCNNNNNNNGG	2 cut(s)	108, 464
BseMI	GCAATG	1 cut(s)	196
BseMII	CTCAG	2 cut(s)	273, 417
BseRI	GAGGAG	3 cut(s)	377, 392, 447
BseXI	GCAGC	4 cut(s)	90, 110, 170, 179
BseYI	CCCAGC	1 cut(s)	341
BshFI	GGCC	4 cut(s)	5, 48, 152, 200
BsiHKCI	CYCGRG	1 cut(s)	106
BsiSI	CCGG	3 cut(s)	45, 60, 471
BslI	CCNNNNNNNGG	2 cut(s)	108, 464
BsmAI	GTCTC	1 cut(s)	398
BsnI	GGCC	4 cut(s)	5, 48, 152, 200
BsoBI	CYCGRG	1 cut(s)	106
Bsp143I	GATC	2 cut(s)	363, 477
Bsp19I	CCATGG	1 cut(s)	369
BspACI	CCGC	6 cut(s)	18, 21, 57, 84, 219, 345
BspANI	GGCC	4 cut(s)	5, 48, 152, 200
BspCNI	CTCAG	2 cut(s)	272, 418
BspLI	GGNNCC	3 cut(s)	232, 436, 469
BspMAI	CTGCAG	2 cut(s)	80, 169
BspTI	CTTAAG	1 cut(s)	134
BsrDI	GCAATG	1 cut(s)	196
BsrFI	RCCGGY	3 cut(s)	44, 59, 470
BssAI	RCCGGY	3 cut(s)	44, 59, 470
BssECI	CCNNGG	9 cut(s)	69, 107, 195, 234, 268, 369, 397, 398, 463
BssMI	GATC	2 cut(s)	363, 477
BssT1I	CCWWGG	4 cut(s)	69, 195, 234, 369
Bst2UI	CCWGG	3 cut(s)	270, 399, 464
Bst4CI	ACNGT	4 cut(s)	10, 230, 452, 493
BstAFI	CTTAAG	1 cut(s)	134
BstAPI	GCANNNNNTGC	3 cut(s)	164, 173, 191
BstC8I	GCNNGC	3 cut(s)	46, 187, 472
BstDEI	CTNAG	2 cut(s)	259, 426
BstDSI	CCRYGG	1 cut(s)	369
BstENI	CCTNNNNNAGG	1 cut(s)	106
BstF5I	GGATG	5 cut(s)	65, 117, 145, 243, 358
BstH2I	RGCGCY	1 cut(s)	84
BstHHI	GCGC	1 cut(s)	83
BstKTI	GATC	2 cut(s)	366, 480
BstMAI	GTCTC	1 cut(s)	398
BstMBI	GATC	2 cut(s)	363, 477
BstMWI	GCNNNNNNNGC	8 cut(s)	26, 158, 164, 167, 173, 182, 191, 480
BstNI	CCWGG	3 cut(s)	270, 399, 464
BstSCI	CCNGG	3 cut(s)	268, 397, 462
BstSFI	CTRYAG	2 cut(s)	76, 165
BstV1I	GCAGC	4 cut(s)	90, 110, 170, 179
BstX2I	RGATCY	1 cut(s)	363
BstXI	CCANNNNNNTGG	1 cut(s)	349
BstYI	RGATCY	1 cut(s)	363
BsuRI	GGCC	4 cut(s)	5, 48, 152, 200
BtgI	CCRYGG	1 cut(s)	369
BtgZI	GCGATG	1 cut(s)	237
BtsCI	GGATG	5 cut(s)	65, 117, 145, 243, 358
BtsI	GCAGTG	1 cut(s)	162
BtsIMutI	CAGTG	2 cut(s)	6, 162
Cac8I	GCNNGC	3 cut(s)	46, 187, 472
CaiI	CAGNNNCTG	1 cut(s)	164
CfoI	GCGC	1 cut(s)	83
Cfr10I	RCCGGY	3 cut(s)	44, 59, 470
Cfr13I	GGNCC	1 cut(s)	382
CviAII	CATG	2 cut(s)	370, 475
DdeI	CTNAG	2 cut(s)	259, 426
DpnI	GATC	2 cut(s)	365, 479
DpnII	GATC	2 cut(s)	363, 477
EaeI	YGGCCR	3 cut(s)	3, 150, 198
EciI	GGCGGA	1 cut(s)	46
Eco130I	CCWWGG	4 cut(s)	69, 195, 234, 369
Eco47I	GGWCC	1 cut(s)	382
Eco88I	CYCGRG	1 cut(s)	106
EcoNI	CCTNNNNNAGG	1 cut(s)	106
EcoO109I	RGGNCCY	1 cut(s)	382
EcoRII	CCWGG	3 cut(s)	268, 397, 462
EcoT14I	CCWWGG	4 cut(s)	69, 195, 234, 369
ErhI	CCWWGG	4 cut(s)	69, 195, 234, 369
FaeI	CATG	2 cut(s)	373, 478
FaiI	YATR	4 cut(s)	371, 409, 441, 476
FatI	CATG	2 cut(s)	369, 474
FauI	CCCGC	1 cut(s)	25
Fnu4HI	GCNGC	7 cut(s)	21, 79, 84, 99, 159, 168, 220
FokI	GGATG	5 cut(s)	52, 124, 152, 230, 365
Fsp4HI	GCNGC	7 cut(s)	21, 79, 84, 99, 159, 168, 220
GlaI	GCGC	1 cut(s)	82
GluI	GCNGC	7 cut(s)	21, 79, 84, 99, 159, 168, 220
GsaI	CCCAGC	1 cut(s)	345
HaeII	RGCGCY	1 cut(s)	84
HaeIII	GGCC	4 cut(s)	5, 48, 152, 200
HapII	CCGG	3 cut(s)	45, 60, 471
HhaI	GCGC	1 cut(s)	83
Hin1II	CATG	2 cut(s)	373, 478
Hin6I	GCGC	1 cut(s)	81
HinP1I	GCGC	1 cut(s)	81
HincII	GTYRAC	1 cut(s)	496
HindII	GTYRAC	1 cut(s)	496
HinfI	GANTC	2 cut(s)	303, 337
HpaI	GTTAAC	1 cut(s)	496
HpaII	CCGG	3 cut(s)	45, 60, 471
HphI	GGTGA	4 cut(s)	4, 409, 452, 481
Hpy166II	GTNNAC	1 cut(s)	496
Hpy188III	TCNNGA	1 cut(s)	289
Hpy8I	GTNNAC	1 cut(s)	496
Hpy99I	CGWCG	1 cut(s)	329
HpyCH4III	ACNGT	4 cut(s)	10, 230, 452, 493
HpyCH4V	TGCA	6 cut(s)	29, 65, 78, 98, 167, 176
HpyF10VI	GCNNNNNNNGC	8 cut(s)	26, 158, 164, 167, 173, 182, 191, 480
HpyF3I	CTNAG	2 cut(s)	259, 426
Hsp92II	CATG	2 cut(s)	373, 478
HspAI	GCGC	1 cut(s)	81
KroI	GCCGGC	2 cut(s)	44, 470
KroNI	GCCGGC	2 cut(s)	46, 472
KspAI	GTTAAC	1 cut(s)	496
Kzo9I	GATC	2 cut(s)	363, 477
LmnI	GCTCC	1 cut(s)	467
Lsp1109I	GCAGC	4 cut(s)	90, 110, 170, 179
LweI	GCATC	2 cut(s)	74, 343
MaeIII	GTNAC	2 cut(s)	10, 487
MalI	GATC	2 cut(s)	365, 479
MboI	GATC	2 cut(s)	363, 477
MboII	GAAGA	1 cut(s)	289
MflI	RGATCY	1 cut(s)	363
MlsI	TGGCCA	2 cut(s)	5, 200
MluNI	TGGCCA	2 cut(s)	5, 200
Mox20I	TGGCCA	2 cut(s)	5, 200
MroNI	GCCGGC	2 cut(s)	44, 470
MscI	TGGCCA	2 cut(s)	5, 200
MseI	TTAA	3 cut(s)	90, 135, 495
MslI	CAYNNNNRTG	1 cut(s)	206
Msp20I	TGGCCA	2 cut(s)	5, 200
MspA1I	CMGCKG	1 cut(s)	345
MspCI	CTTAAG	1 cut(s)	134
MspI	CCGG	3 cut(s)	45, 60, 471
MspR9I	CCNGG	3 cut(s)	270, 399, 464
MvaI	CCWGG	3 cut(s)	270, 399, 464
MwoI	GCNNNNNNNGC	8 cut(s)	26, 158, 164, 167, 173, 182, 191, 480
NaeI	GCCGGC	2 cut(s)	46, 472
NcoI	CCATGG	1 cut(s)	369
NdeII	GATC	2 cut(s)	363, 477
NgoMIV	GCCGGC	2 cut(s)	44, 470
NlaIII	CATG	2 cut(s)	373, 478
NlaIV	GGNNCC	3 cut(s)	232, 436, 469
NmeAIII	GCCGAG	1 cut(s)	195
NmuCI	GTSAC	2 cut(s)	10, 487
PasI	CCCWGGG	1 cut(s)	398
PcsI	WCGNNNNNNNCGW	1 cut(s)	330
PdiI	GCCGGC	2 cut(s)	46, 472
PfeI	GAWTC	2 cut(s)	303, 337
PkrI	GCNGC	7 cut(s)	22, 80, 85, 100, 160, 169, 221
PpuMI	RGGWCCY	1 cut(s)	382
Psp5II	RGGWCCY	1 cut(s)	382
Psp6I	CCWGG	3 cut(s)	268, 397, 462
PspFI	CCCAGC	1 cut(s)	341
PspGI	CCWGG	3 cut(s)	268, 397, 462
PspN4I	GGNNCC	3 cut(s)	232, 436, 469
PspPI	GGNCC	1 cut(s)	382
PspPPI	RGGWCCY	1 cut(s)	382
PstI	CTGCAG	2 cut(s)	80, 169
PstNI	CAGNNNCTG	1 cut(s)	164
PsuI	RGATCY	1 cut(s)	363
RseI	CAYNNNNRTG	1 cut(s)	206
SaqAI	TTAA	3 cut(s)	90, 135, 495
SatI	GCNGC	7 cut(s)	21, 79, 84, 99, 159, 168, 220
Sau3AI	GATC	2 cut(s)	363, 477
Sau96I	GGNCC	1 cut(s)	382
ScrFI	CCNGG	3 cut(s)	270, 399, 464
SetI	ASST	6 cut(s)	75, 210, 257, 387, 422, 436
SfaNI	GCATC	2 cut(s)	74, 343
SfcI	CTRYAG	2 cut(s)	76, 165
SgrAI	CRCCGGYG	1 cut(s)	59
SinI	GGWCC	1 cut(s)	382
SmiMI	CAYNNNNRTG	1 cut(s)	206
SmlI	CTYRAG	2 cut(s)	50, 134
SmoI	CTYRAG	2 cut(s)	50, 134
SsiI	CCGC	6 cut(s)	18, 21, 57, 84, 219, 345
StyD4I	CCNGG	3 cut(s)	268, 397, 462
StyI	CCWWGG	4 cut(s)	69, 195, 234, 369
TaaI	ACNGT	4 cut(s)	10, 230, 452, 493
TaqI	TCGA	1 cut(s)	324
TauI	GCSGC	3 cut(s)	23, 86, 222
TfiI	GAWTC	2 cut(s)	303, 337
Tru1I	TTAA	3 cut(s)	90, 135, 495
Tru9I	TTAA	3 cut(s)	90, 135, 495
TscAI	CASTG	2 cut(s)	13, 169
TseFI	GTSAC	2 cut(s)	10, 487
TseI	GCWGC	4 cut(s)	78, 98, 158, 167
Tsp45I	GTSAC	2 cut(s)	10, 487
TspDTI	ATGAA	1 cut(s)	232
TspRI	CASTG	2 cut(s)	13, 169
Vha464I	CTTAAG	1 cut(s)	134
VpaK11BI	GGWCC	1 cut(s)	382
XagI	CCTNNNNNAGG	1 cut(s)	106

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.