Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0015171

Physical Location & Seq

Genomic Coordinates Forward (+)

34132845 .. 34135780

Gene Structure 2936 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G376700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 852 bp

ATGTTCAGAAACCAGTACGACACAGATGTGACGACATGGAGCCCAGCCGGGCGGCTTTTCCAGGTGGAGTACGCGATGGAGGCCGTGAAGCAAGGCTCGGCGGCCATTGGGCTCCGATCCAAGACCCACGTGGTGCTTGCCTGCGTTAACAAGGCCAACTCCGAGCTTTCTTCTCATCAGAAGAAGATTTTCAAGGTCGACGACCACATCGGCGTCGCCATTGCCGGCCTTACCGCCGACGGTCGTGTCCTCTCTCGATATATGCGATCGGAGTGCATCAACTACAACTACACTTATGAATCTCCGCTCCCCGTCGGACGACTGGTCGTTCAGCTTGCCGATAAGGCTCAGGTCTGTACTCAACGCTCATGGAAACGGCCATATGGTGTTGGACTACTAGTAGGTGGTTTGGATGAGTCTGGAGCACACCTATATTACAACTGCCCGAGTGGAAACTACTTTGAATACCAGGCGTTTGCAATAGGATCTCGCTCACAAGCTGCTAAGACATACTTGGAACGCAGGTTTGAGAACTTCACGAACTCTTCACGGGAGGATCTGATCAAGGATGCCCTCATTGCGACAAGGGAAACCTTGCAGGGAGAAAAACTGAGAAGTTCCATATGCACAATTGCTGTGGTAGGAGTCGAGGAGCCTTTCCATATATTGGATCAGGACACTGTTCAGAAGTTGATTGATGCATTTGAGATCGTGGGGCAGGACGAGCCTCCTGCTGCTGAACCTGATGTTGCTACTGAGCCTGGACCAGCTGCAGAAGAGGGAGCTGGTGCTGGCGATGGTGCTGGCCAGGGTGCTGTTGCTGAACCAGATGTAGCTCCAATGGATATTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000502 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005839 GO:0005886 GO:0005911 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009506 GO:0016020 GO:0019538 GO:0019773 GO:0030054 GO:0030163 GO:0032991 GO:0042221 GO:0043170 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046685 GO:0050896 GO:0055044 GO:0071704 GO:0071944 GO:1901564 GO:1901565 GO:1901575 GO:1902494 GO:1905368 GO:1905369

KEGG Pathways

Metabolic & Signaling

ko00220 ko01100 ko01110 ko01130 ko01230 ko03050 map00220 map01100 map01110 map01130 map01230 map03050

Pfam Domains

Protein Families

Proteasome Proteasome_A_N

Protein Analysis

284

Amino Acids

30.79

Weight (kDa)

4.99

Isoelectric Point (pI)

51.42

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015171)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G47250 AT5G42790
fragaria_vesca	FvH4_2g39570
malus_domestica	MD08G1028900.v1.1
prunus_persica	Prupe.1G376700_v2.0.a1
pyrus_communis	pycom08g02270 pycom15g02100
rosa_chinensis	RchiOBHm_Chr6g0301351
rosa_laevigata	RLG00000011258
rosa_roxburghii	Rroxscaffold_7G00166890
rosa_rugosa	Rorug06G0303900
rosa_samantha	Rh6AG417500 Rh6BG424200 Rh6CG431300 Rh6DG417200
rosa_wichuraiana	Rw6G036130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	245
Acc36I	ACCTGC	1 cut(s)	513
AccB7I	CCANNNNNTGG	1 cut(s)	667
AccBSI	CCGCTC	1 cut(s)	307
AccI	GTMKAC	1 cut(s)	198
AccII	CGCG	1 cut(s)	74
AciI	CCGC	4 cut(s)	52, 101, 234, 305
AclWI	GGATC	4 cut(s)	111, 493, 564, 678
AcoI	YGGCCR	3 cut(s)	102, 377, 805
AcvI	CACGTG	1 cut(s)	130
AcyI	GRCGYC	1 cut(s)	213
AdeI	CACNNNGTG	1 cut(s)	133
AfaI	GTAC	3 cut(s)	17, 71, 358
AfiI	CCNNNNNNNGG	1 cut(s)	667
AgsI	TTSAA	2 cut(s)	193, 464
AhdI	GACNNNNNGTC	1 cut(s)	323
AhlI	ACTAGT	1 cut(s)	397
AjnI	CCWGG	4 cut(s)	60, 468, 760, 807
AleI	CACNNNNGTG	1 cut(s)	26
AluBI	AGCT	6 cut(s)	166, 334, 500, 770, 785, 836
AluI	AGCT	6 cut(s)	166, 334, 500, 770, 785, 836
Alw21I	GWGCWC	1 cut(s)	427
AlwI	GGATC	4 cut(s)	111, 493, 564, 678
Ama87I	CYCGRG	1 cut(s)	445
AoxI	GGCC	6 cut(s)	81, 102, 153, 226, 377, 805
ApeKI	GCWGC	3 cut(s)	500, 734, 770
Asp700I	GAANNNNTTC	1 cut(s)	188
AspS9I	GGNCC	1 cut(s)	764
AsuC2I	CCSGG	1 cut(s)	49
AvaI	CYCGRG	1 cut(s)	445
AvaII	GGWCC	1 cut(s)	764
BalI	TGGCCA	1 cut(s)	807
BanII	GRGCYC	2 cut(s)	44, 114
BbrPI	CACGTG	1 cut(s)	130
Bbv12I	GWGCWC	1 cut(s)	427
BbvI	GCAGC	3 cut(s)	487, 721, 757
BccI	CCATC	2 cut(s)	70, 791
BceAI	ACGGC	2 cut(s)	68, 392
BcgI	CGANNNNNNTGC	4 cut(s)	255, 289, 713, 747
BciT130I	CCWGG	4 cut(s)	62, 470, 762, 809
BclI	TGATCA	1 cut(s)	561
BcnI	CCSGG	1 cut(s)	49
BcuI	ACTAGT	1 cut(s)	397
BfaI	CTAG	1 cut(s)	398
BfmI	CTRYAG	1 cut(s)	771
BfuAI	ACCTGC	1 cut(s)	513
BglI	GCCNNNNNGGC	1 cut(s)	344
BisI	GCNGC	5 cut(s)	53, 102, 501, 735, 771
BlsI	GCNGC	5 cut(s)	54, 103, 502, 736, 772
Bme1390I	CCNGG	5 cut(s)	49, 62, 470, 762, 809
Bme18I	GGWCC	1 cut(s)	764
BmeRI	GACNNNNNGTC	1 cut(s)	323
BmeT110I	CYCGRG	1 cut(s)	445
BmgT120I	GGNCC	1 cut(s)	764
BmiI	GGNNCC	3 cut(s)	41, 113, 654
BmrFI	CCNGG	5 cut(s)	49, 62, 470, 762, 809
BmsI	GCATC	3 cut(s)	285, 559, 688
BpmI	CTGGAG	1 cut(s)	441
Bpu10I	CCTNAGC	1 cut(s)	348
BpuMI	CCSGG	1 cut(s)	49
BsaAI	YACGTR	1 cut(s)	130
BsaHI	GRCGYC	1 cut(s)	213
BsaJI	CCNNGG	1 cut(s)	808
Bsc4I	CCNNNNNNNGG	1 cut(s)	667
Bse118I	RCCGGY	1 cut(s)	224
Bse1I	ACTGG	2 cut(s)	13, 327
Bse3DI	GCAATG	2 cut(s)	219, 576
BseBI	CCWGG	4 cut(s)	62, 470, 762, 809
BseDI	CCNNGG	1 cut(s)	808
BseGI	GGATG	2 cut(s)	418, 574
BseLI	CCNNNNNNNGG	1 cut(s)	667
BseMI	GCAATG	2 cut(s)	219, 576
BseMII	CTCAG	3 cut(s)	362, 602, 747
BseNI	ACTGG	2 cut(s)	13, 327
BseRI	GAGGAG	1 cut(s)	665
BseXI	GCAGC	3 cut(s)	487, 721, 757
BseYI	CCCAGC	1 cut(s)	43
Bsh1236I	CGCG	1 cut(s)	74
Bsh1285I	CGRYCG	2 cut(s)	244, 269
BshFI	GGCC	6 cut(s)	83, 104, 155, 228, 379, 807
BsiEI	CGRYCG	2 cut(s)	244, 269
BsiHKAI	GWGCWC	1 cut(s)	427
BsiHKCI	CYCGRG	1 cut(s)	445
BsiSI	CCGG	2 cut(s)	48, 225
BslI	CCNNNNNNNGG	1 cut(s)	667
BsnI	GGCC	6 cut(s)	83, 104, 155, 228, 379, 807
BsoBI	CYCGRG	1 cut(s)	445
Bsp1286I	GDGCHC	3 cut(s)	44, 114, 427
Bsp143I	GATC	7 cut(s)	116, 266, 485, 556, 561, 670, 708
BspACI	CCGC	4 cut(s)	52, 101, 234, 305
BspANI	GGCC	6 cut(s)	83, 104, 155, 228, 379, 807
BspCNI	CTCAG	3 cut(s)	361, 603, 748
BspFNI	CGCG	1 cut(s)	74
BspLI	GGNNCC	3 cut(s)	41, 113, 654
BspMAI	CTGCAG	1 cut(s)	775
BspMI	ACCTGC	1 cut(s)	513
BspPI	GGATC	4 cut(s)	111, 493, 564, 678
BsrBI	CCGCTC	1 cut(s)	307
BsrDI	GCAATG	2 cut(s)	219, 576
BsrFI	RCCGGY	1 cut(s)	224
BsrI	ACTGG	2 cut(s)	13, 327
BssAI	RCCGGY	1 cut(s)	224
BssECI	CCNNGG	1 cut(s)	808
BssMI	GATC	7 cut(s)	116, 266, 485, 556, 561, 670, 708
BssNI	GRCGYC	1 cut(s)	213
Bst2UI	CCWGG	4 cut(s)	62, 470, 762, 809
Bst4CI	ACNGT	2 cut(s)	242, 682
Bst6I	CTCTTC	2 cut(s)	550, 771
BstACI	GRCGYC	1 cut(s)	213
BstBAI	YACGTR	1 cut(s)	130
BstC8I	GCNNGC	6 cut(s)	138, 142, 226, 336, 793, 805
BstDEI	CTNAG	4 cut(s)	348, 504, 611, 756
BstF5I	GGATG	2 cut(s)	418, 574
BstFNI	CGCG	1 cut(s)	74
BstKTI	GATC	7 cut(s)	119, 269, 488, 559, 564, 673, 711
BstMBI	GATC	7 cut(s)	116, 266, 485, 556, 561, 670, 708
BstMCI	CGRYCG	2 cut(s)	244, 269
BstMWI	GCNNNNNNNGC	4 cut(s)	80, 344, 578, 724
BstNI	CCWGG	4 cut(s)	62, 470, 762, 809
BstSCI	CCNGG	5 cut(s)	47, 60, 468, 760, 807
BstSFI	CTRYAG	1 cut(s)	771
BstUI	CGCG	1 cut(s)	74
BstV1I	GCAGC	3 cut(s)	487, 721, 757
BstX2I	RGATCY	2 cut(s)	485, 556
BstYI	RGATCY	2 cut(s)	485, 556
BsuRI	GGCC	6 cut(s)	83, 104, 155, 228, 379, 807
BtgZI	GCGATG	2 cut(s)	89, 810
BtsCI	GGATG	2 cut(s)	418, 574
BtsIMutI	CAGTG	1 cut(s)	678
BveI	ACCTGC	1 cut(s)	513
Cac8I	GCNNGC	6 cut(s)	138, 142, 226, 336, 793, 805
Cfr10I	RCCGGY	1 cut(s)	224
Cfr13I	GGNCC	1 cut(s)	764
CseI	GACGC	1 cut(s)	202
Csp6I	GTAC	3 cut(s)	16, 70, 357
CspCI	CAANNNNNGTGG	2 cut(s)	618, 653
CviAII	CATG	2 cut(s)	36, 369
CviQI	GTAC	3 cut(s)	16, 70, 357
DdeI	CTNAG	4 cut(s)	348, 504, 611, 756
DpnI	GATC	7 cut(s)	118, 268, 487, 558, 563, 672, 710
DpnII	GATC	7 cut(s)	116, 266, 485, 556, 561, 670, 708
DraIII	CACNNNGTG	1 cut(s)	133
DrdI	GACNNNNNNGTC	1 cut(s)	245
DriI	GACNNNNNGTC	1 cut(s)	323
DseDI	GACNNNNNNGTC	1 cut(s)	245
EaeI	YGGCCR	3 cut(s)	102, 377, 805
Eam1104I	CTCTTC	2 cut(s)	550, 771
Eam1105I	GACNNNNNGTC	1 cut(s)	323
EarI	CTCTTC	2 cut(s)	550, 771
Eco24I	GRGCYC	2 cut(s)	44, 114
Eco47I	GGWCC	1 cut(s)	764
Eco72I	CACGTG	1 cut(s)	130
Eco88I	CYCGRG	1 cut(s)	445
EcoRII	CCWGG	4 cut(s)	60, 468, 760, 807
EcoT22I	ATGCAT	1 cut(s)	703
EcoT38I	GRGCYC	2 cut(s)	44, 114
FaeI	CATG	2 cut(s)	39, 372
FalI	AAGNNNNNCTT	2 cut(s)	497, 529
FatI	CATG	2 cut(s)	35, 368
FauNDI	CATATG	2 cut(s)	382, 623
FbaI	TGATCA	1 cut(s)	561
FblI	GTMKAC	1 cut(s)	198
Fnu4HI	GCNGC	5 cut(s)	53, 102, 501, 735, 771
FokI	GGATG	2 cut(s)	425, 581
FriOI	GRGCYC	2 cut(s)	44, 114
Fsp4HI	GCNGC	5 cut(s)	53, 102, 501, 735, 771
FspBI	CTAG	1 cut(s)	398
GluI	GCNGC	5 cut(s)	53, 102, 501, 735, 771
GsaI	CCCAGC	1 cut(s)	47
GsuI	CTGGAG	1 cut(s)	441
HaeIII	GGCC	6 cut(s)	83, 104, 155, 228, 379, 807
HapII	CCGG	2 cut(s)	48, 225
HgaI	GACGC	1 cut(s)	202
Hin1I	GRCGYC	1 cut(s)	213
Hin1II	CATG	2 cut(s)	39, 372
HincII	GTYRAC	2 cut(s)	148, 199
HindII	GTYRAC	2 cut(s)	148, 199
HinfI	GANTC	3 cut(s)	299, 416, 645
HpaI	GTTAAC	1 cut(s)	148
HpaII	CCGG	2 cut(s)	48, 225
Hpy166II	GTNNAC	2 cut(s)	148, 199
Hpy188I	TCNGA	8 cut(s)	8, 116, 163, 180, 271, 317, 561, 687
Hpy188III	TCNNGA	4 cut(s)	255, 420, 538, 674
Hpy8I	GTNNAC	2 cut(s)	148, 199
Hpy99I	CGWCG	4 cut(s)	203, 218, 242, 317
HpyCH4III	ACNGT	2 cut(s)	242, 682
HpyCH4IV	ACGT	1 cut(s)	129
HpyCH4V	TGCA	6 cut(s)	276, 479, 598, 627, 701, 773
HpyF10VI	GCNNNNNNNGC	4 cut(s)	80, 344, 578, 724
HpyF3I	CTNAG	4 cut(s)	348, 504, 611, 756
HpySE526I	ACGT	1 cut(s)	129
Hsp92I	GRCGYC	1 cut(s)	213
Hsp92II	CATG	2 cut(s)	39, 372
KroI	GCCGGC	1 cut(s)	224
KroNI	GCCGGC	1 cut(s)	226
Ksp22I	TGATCA	1 cut(s)	561
KspAI	GTTAAC	1 cut(s)	148
Kzo9I	GATC	7 cut(s)	116, 266, 485, 556, 561, 670, 708
LmnI	GCTCC	7 cut(s)	39, 117, 312, 422, 652, 782, 841
Lsp1109I	GCAGC	3 cut(s)	487, 721, 757
LweI	GCATC	3 cut(s)	285, 559, 688
MaeI	CTAG	1 cut(s)	398
MaeII	ACGT	1 cut(s)	129
MaeIII	GTNAC	1 cut(s)	28
MalI	GATC	7 cut(s)	118, 268, 487, 558, 563, 672, 710
MbiI	CCGCTC	1 cut(s)	307
MboI	GATC	7 cut(s)	116, 266, 485, 556, 561, 670, 708
MboII	GAAGA	5 cut(s)	162, 193, 196, 537, 788
MfeI	CAATTG	1 cut(s)	630
MflI	RGATCY	2 cut(s)	485, 556
MhlI	GDGCHC	3 cut(s)	44, 114, 427
MlsI	TGGCCA	1 cut(s)	807
MluCI	AATT	1 cut(s)	630
MluNI	TGGCCA	1 cut(s)	807
MlyI	GAGTC	2 cut(s)	425, 654
MmeI	TCCRAC	2 cut(s)	295, 370
MnlI	CCTC	7 cut(s)	73, 260, 547, 584, 643, 738, 772
Mox20I	TGGCCA	1 cut(s)	807
Mph1103I	ATGCAT	1 cut(s)	703
MroNI	GCCGGC	1 cut(s)	224
MroXI	GAANNNNTTC	1 cut(s)	188
MscI	TGGCCA	1 cut(s)	807
MseI	TTAA	1 cut(s)	147
MslI	CAYNNNNRTG	1 cut(s)	26
Msp20I	TGGCCA	1 cut(s)	807
MspA1I	CMGCKG	1 cut(s)	770
MspI	CCGG	2 cut(s)	48, 225
MspR9I	CCNGG	5 cut(s)	49, 62, 470, 762, 809
MunI	CAATTG	1 cut(s)	630
MvaI	CCWGG	4 cut(s)	62, 470, 762, 809
MvnI	CGCG	1 cut(s)	74
MwoI	GCNNNNNNNGC	4 cut(s)	80, 344, 578, 724
NaeI	GCCGGC	1 cut(s)	226
NciI	CCSGG	1 cut(s)	49
NdeI	CATATG	2 cut(s)	382, 623
NdeII	GATC	7 cut(s)	116, 266, 485, 556, 561, 670, 708
NgoMIV	GCCGGC	1 cut(s)	224
NlaIII	CATG	2 cut(s)	39, 372
NlaIV	GGNNCC	3 cut(s)	41, 113, 654
NmeAIII	GCCGAG	1 cut(s)	77
NmuCI	GTSAC	1 cut(s)	28
NsiI	ATGCAT	1 cut(s)	703
OliI	CACNNNNGTG	1 cut(s)	26
PcsI	WCGNNNNNNNCGW	1 cut(s)	262
PdiI	GCCGGC	1 cut(s)	226
PdmI	GAANNNNTTC	1 cut(s)	188
PfeI	GAWTC	1 cut(s)	299
PflMI	CCANNNNNTGG	1 cut(s)	667
PkrI	GCNGC	5 cut(s)	54, 103, 502, 736, 772
Ple19I	CGATCG	1 cut(s)	269
PleI	GAGTC	2 cut(s)	424, 653
PmaCI	CACGTG	1 cut(s)	130
PmlI	CACGTG	1 cut(s)	130
PpsI	GAGTC	2 cut(s)	424, 653
Ppu21I	YACGTR	1 cut(s)	130
Psp6I	CCWGG	4 cut(s)	60, 468, 760, 807
PspCI	CACGTG	1 cut(s)	130
PspFI	CCCAGC	1 cut(s)	43
PspGI	CCWGG	4 cut(s)	60, 468, 760, 807
PspN4I	GGNNCC	3 cut(s)	41, 113, 654
PspPI	GGNCC	1 cut(s)	764
PstI	CTGCAG	1 cut(s)	775
PsuI	RGATCY	2 cut(s)	485, 556
PvuI	CGATCG	1 cut(s)	269
PvuII	CAGCTG	1 cut(s)	770
RsaI	GTAC	3 cut(s)	17, 71, 358
RsaNI	GTAC	3 cut(s)	16, 70, 357
RseI	CAYNNNNRTG	1 cut(s)	26
SalI	GTCGAC	1 cut(s)	197
SaqAI	TTAA	1 cut(s)	147
SatI	GCNGC	5 cut(s)	53, 102, 501, 735, 771
Sau3AI	GATC	7 cut(s)	116, 266, 485, 556, 561, 670, 708
Sau96I	GGNCC	1 cut(s)	764
SchI	GAGTC	2 cut(s)	425, 654
ScrFI	CCNGG	5 cut(s)	49, 62, 470, 762, 809
SduI	GDGCHC	3 cut(s)	44, 114, 427
SfaNI	GCATC	3 cut(s)	285, 559, 688
SfcI	CTRYAG	1 cut(s)	771
SinI	GGWCC	1 cut(s)	764
SmiMI	CAYNNNNRTG	1 cut(s)	26
SpeI	ACTAGT	1 cut(s)	397
Sse9I	AATT	1 cut(s)	630
SsiI	CCGC	4 cut(s)	52, 101, 234, 305
SspMI	CTAG	1 cut(s)	398
StyD4I	CCNGG	5 cut(s)	47, 60, 468, 760, 807
TaaI	ACNGT	2 cut(s)	242, 682
TaiI	ACGT	1 cut(s)	132
TaqI	TCGA	3 cut(s)	198, 256, 648
TasI	AATT	1 cut(s)	630
TatI	WGTACW	1 cut(s)	356
TauI	GCSGC	2 cut(s)	55, 104
TfiI	GAWTC	1 cut(s)	299
Tru1I	TTAA	1 cut(s)	147
Tru9I	TTAA	1 cut(s)	147
TscAI	CASTG	1 cut(s)	685
TseFI	GTSAC	1 cut(s)	28
TseI	GCWGC	3 cut(s)	500, 734, 770
Tsp45I	GTSAC	1 cut(s)	28
TspDTI	ATGAA	1 cut(s)	312
TspRI	CASTG	1 cut(s)	685
Van91I	CCANNNNNTGG	1 cut(s)	667
VpaK11BI	GGWCC	1 cut(s)	764
XcmI	CCANNNNNNNNNTGG	1 cut(s)	127
XmiI	GTMKAC	1 cut(s)	198
XmnI	GAANNNNTTC	1 cut(s)	188
XspI	CTAG	1 cut(s)	398
Zsp2I	ATGCAT	1 cut(s)	703

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.