Prupe.1G380400_v2.0.a1

Protein of unknown function (DUF502)

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Forward (+)
34308780 .. 34311168
2389 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G380400.1

Sequence Viewer

Length: 813 bp
ATGGCGACGAGAGAGAGAGAAAGGGAGAGGGATCTAGAGCTCCTCATCCCAGTTGCACCAAGTAACGAAAATGCAGATTCCAAATCCTCCTCCCCAGCCAACTCACCACCTCCTACCACATCCCATCCCCATCACACCACTGGCCGCGAGGCATTTTCAAAAGTCATCCGCAGCTGGGCTTCCAAGAAGTTTATGACAGGATGTGTCATTCTTCTTCCAATAGCTATTACATTCTACATCACATGGCATTTCATTAAATTTGTGGATGGTTTCTTCTCCCCAATCTACAATCGCCTAGGGATCAATATTTTTGGTCTTGGATTTGCCACCTCCCTCACATTCATCTTTTTCGTCGGTGTTTTCATGCAATCGTGGTTGGGAACGTCTGTTCTTACTCTTTGGGAGTGGTTTATTAAGAAAATGCCACTTATAAGCTATATCTATGCTGCCTCAAAGCAAATTAGTATAGCAATATCACCAGATCAGAGCTCTAATGCTTTCAAGGAAGTGGCTATAATAAGGCATCCAAGAGTTGGGGAGTATGCATTAGGATTTATCACTTCAACAGTTGTTCTTGATCAAAGGAGTGTAGGAGAAGAACTCTGTTGTGTTTATGTACCTACCAACCATCTTTATCTTGGAGATATTTTTCTGATTAGTCCCAAGGATATTCTGAGACCCAACCTGTCCGTTCGAGAGGGGATTGAAATTGTAATATCCGGAGGTCTGTCAATACCGCAACTGTTGACGACGGTGGATGCACAAGTCCTTACACCAAGAAGAGTTCCTCACTTTGAAGAGCCAAAAGTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

271

Amino Acids

30.27

Weight (kDa)

8.41

Isoelectric Point (pI)

45.42

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0015365)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 431
AccB7I CCANNNNNTGG 1 cut(s) 533
AccII CGCG 1 cut(s) 147
AccIII TCCGGA 1 cut(s) 719
AciI CCGC 3 cut(s) 145, 169, 737
AclWI GGATC 2 cut(s) 39, 308
AcoI YGGCCR 1 cut(s) 142
AcsI RAATTY 1 cut(s) 257
AfaI GTAC 1 cut(s) 618
AfiI CCNNNNNNNGG 2 cut(s) 175, 533
AgsI TTSAA 5 cut(s) 159, 502, 564, 707, 797
AloI GAACNNNNNNTCC 2 cut(s) 372, 404
AluBI AGCT 5 cut(s) 40, 174, 224, 435, 489
AluI AGCT 5 cut(s) 40, 174, 224, 435, 489
Alw21I GWGCWC 2 cut(s) 42, 491
Alw26I GTCTC 1 cut(s) 670
AlwI GGATC 2 cut(s) 39, 308
Aor13HI TCCGGA 1 cut(s) 719
AoxI GGCC 1 cut(s) 142
ApeKI GCWGC 2 cut(s) 171, 446
ApoI RAATTY 1 cut(s) 257
AspA2I CCTAGG 1 cut(s) 295
AsuHPI GGTGA 2 cut(s) 96, 468
AvrII CCTAGG 1 cut(s) 295
BanII GRGCYC 2 cut(s) 42, 491
Bbv12I GWGCWC 2 cut(s) 42, 491
BbvI GCAGC 2 cut(s) 183, 433
BccI CCATC 4 cut(s) 132, 138, 260, 636
BclI TGATCA 1 cut(s) 577
BcoDI GTCTC 1 cut(s) 670
BfaI CTAG 2 cut(s) 35, 296
BisI GCNGC 3 cut(s) 145, 172, 447
BlnI CCTAGG 1 cut(s) 295
BlsI GCNGC 3 cut(s) 146, 173, 448
BmrI ACTGGG 1 cut(s) 44
BmsI GCATC 2 cut(s) 532, 748
BmuI ACTGGG 1 cut(s) 44
BplI GAGNNNNNCTC 2 cut(s) 585, 617
BsaI GGTCTC 1 cut(s) 670
BsaJI CCNNGG 2 cut(s) 295, 663
BsaWI WCCGGW 1 cut(s) 719
Bsc4I CCNNNNNNNGG 2 cut(s) 175, 533
Bse1I ACTGG 2 cut(s) 50, 145
BseAI TCCGGA 1 cut(s) 719
BseDI CCNNGG 2 cut(s) 295, 663
BseGI GGATG 8 cut(s) 45, 119, 124, 165, 206, 271, 523, 763
BseLI CCNNNNNNNGG 2 cut(s) 175, 533
BseMII CTCAG 1 cut(s) 665
BseNI ACTGG 2 cut(s) 50, 145
BseRI GAGGAG 2 cut(s) 32, 79
BseXI GCAGC 2 cut(s) 183, 433
BseYI CCCAGC 2 cut(s) 94, 174
Bsh1236I CGCG 1 cut(s) 147
BshFI GGCC 1 cut(s) 144
BsiHKAI GWGCWC 2 cut(s) 42, 491
BsiSI CCGG 1 cut(s) 720
BslFI GGGAC 1 cut(s) 645
BslI CCNNNNNNNGG 2 cut(s) 175, 533
BsmAI GTCTC 1 cut(s) 670
BsmFI GGGAC 1 cut(s) 645
BsnI GGCC 1 cut(s) 144
Bso31I GGTCTC 1 cut(s) 670
Bsp1286I GDGCHC 2 cut(s) 42, 491
Bsp13I TCCGGA 1 cut(s) 719
Bsp143I GATC 4 cut(s) 31, 300, 481, 577
BspACI CCGC 3 cut(s) 145, 169, 737
BspANI GGCC 1 cut(s) 144
BspCNI CTCAG 1 cut(s) 666
BspEI TCCGGA 1 cut(s) 719
BspFNI CGCG 1 cut(s) 147
BspPI GGATC 2 cut(s) 39, 308
BspQI GCTCTTC 1 cut(s) 792
BspTNI GGTCTC 1 cut(s) 670
BsrI ACTGG 2 cut(s) 50, 145
BssECI CCNNGG 2 cut(s) 295, 663
BssMI GATC 4 cut(s) 31, 300, 481, 577
BssT1I CCWWGG 2 cut(s) 295, 663
Bst4CI ACNGT 3 cut(s) 568, 744, 754
Bst6I CTCTTC 2 cut(s) 775, 792
BstDEI CTNAG 1 cut(s) 674
BstF5I GGATG 8 cut(s) 45, 119, 124, 165, 206, 271, 523, 763
BstFNI CGCG 1 cut(s) 147
BstKTI GATC 4 cut(s) 34, 303, 484, 580
BstMAI GTCTC 1 cut(s) 670
BstMBI GATC 4 cut(s) 31, 300, 481, 577
BstUI CGCG 1 cut(s) 147
BstV1I GCAGC 2 cut(s) 183, 433
BstX2I RGATCY 1 cut(s) 31
BstYI RGATCY 1 cut(s) 31
BsuRI GGCC 1 cut(s) 144
BtsCI GGATG 8 cut(s) 45, 119, 124, 165, 206, 271, 523, 763
BtsIMutI CAGTG 1 cut(s) 138
Csp6I GTAC 1 cut(s) 617
CviAII CATG 2 cut(s) 243, 364
CviQI GTAC 1 cut(s) 617
DdeI CTNAG 1 cut(s) 674
DpnI GATC 4 cut(s) 33, 302, 483, 579
DpnII GATC 4 cut(s) 31, 300, 481, 577
EaeI YGGCCR 1 cut(s) 142
Eam1104I CTCTTC 2 cut(s) 775, 792
EarI CTCTTC 2 cut(s) 775, 792
Ecl136II GAGCTC 2 cut(s) 40, 489
Eco130I CCWWGG 2 cut(s) 295, 663
Eco24I GRGCYC 2 cut(s) 42, 491
Eco31I GGTCTC 1 cut(s) 670
Eco53kI GAGCTC 2 cut(s) 40, 489
EcoICRI GAGCTC 2 cut(s) 40, 489
EcoT14I CCWWGG 2 cut(s) 295, 663
EcoT22I ATGCAT 1 cut(s) 547
EcoT38I GRGCYC 2 cut(s) 42, 491
ErhI CCWWGG 2 cut(s) 295, 663
FaeI CATG 2 cut(s) 246, 367
FaqI GGGAC 1 cut(s) 645
FatI CATG 2 cut(s) 242, 363
FbaI TGATCA 1 cut(s) 577
Fnu4HI GCNGC 3 cut(s) 145, 172, 447
FokI GGATG 8 cut(s) 32, 106, 111, 152, 213, 278, 510, 770
FriOI GRGCYC 2 cut(s) 42, 491
Fsp4HI GCNGC 3 cut(s) 145, 172, 447
FspBI CTAG 2 cut(s) 35, 296
GluI GCNGC 3 cut(s) 145, 172, 447
GsaI CCCAGC 2 cut(s) 98, 178
HaeIII GGCC 1 cut(s) 144
HapII CCGG 1 cut(s) 720
Hin1II CATG 2 cut(s) 246, 367
HincII GTYRAC 1 cut(s) 747
HindII GTYRAC 1 cut(s) 747
HinfI GANTC 1 cut(s) 77
HpaII CCGG 1 cut(s) 720
HphI GGTGA 2 cut(s) 96, 468
Hpy166II GTNNAC 1 cut(s) 747
Hpy188I TCNGA 3 cut(s) 486, 654, 675
Hpy188III TCNNGA 4 cut(s) 35, 575, 695, 720
Hpy8I GTNNAC 1 cut(s) 747
Hpy99I CGWCG 3 cut(s) 10, 356, 754
HpyCH4III ACNGT 3 cut(s) 568, 744, 754
HpyCH4IV ACGT 1 cut(s) 383
HpyCH4V TGCA 5 cut(s) 56, 74, 367, 545, 761
HpyF3I CTNAG 1 cut(s) 674
HpySE526I ACGT 1 cut(s) 383
Hsp92II CATG 2 cut(s) 246, 367
Kpn2I TCCGGA 1 cut(s) 719
Ksp22I TGATCA 1 cut(s) 577
Kzo9I GATC 4 cut(s) 31, 300, 481, 577
LguI GCTCTTC 1 cut(s) 792
LmnI GCTCC 1 cut(s) 45
LpnPI CCDG 8 cut(s) 63, 108, 126, 160, 183, 492, 698, 733
Lsp1109I GCAGC 2 cut(s) 183, 433
LweI GCATC 2 cut(s) 532, 748
MaeI CTAG 2 cut(s) 35, 296
MaeII ACGT 1 cut(s) 383
MaeIII GTNAC 1 cut(s) 62
MalI GATC 4 cut(s) 33, 302, 483, 579
MboI GATC 4 cut(s) 31, 300, 481, 577
MboII GAAGA 6 cut(s) 203, 206, 265, 608, 792, 809
MflI RGATCY 1 cut(s) 31
MhlI GDGCHC 2 cut(s) 42, 491
MluCI AATT 3 cut(s) 257, 459, 708
Mph1103I ATGCAT 1 cut(s) 547
MroI TCCGGA 1 cut(s) 719
MseI TTAA 2 cut(s) 255, 414
MspA1I CMGCKG 1 cut(s) 174
MspI CCGG 1 cut(s) 720
MvnI CGCG 1 cut(s) 147
NdeII GATC 4 cut(s) 31, 300, 481, 577
NlaIII CATG 2 cut(s) 246, 367
NsiI ATGCAT 1 cut(s) 547
PciSI GCTCTTC 1 cut(s) 792
PfeI GAWTC 1 cut(s) 77
PflMI CCANNNNNTGG 1 cut(s) 533
PkrI GCNGC 3 cut(s) 146, 173, 448
PsiI TTATAA 1 cut(s) 431
Psp124BI GAGCTC 2 cut(s) 42, 491
PspFI CCCAGC 2 cut(s) 94, 174
PsuI RGATCY 1 cut(s) 31
PvuII CAGCTG 1 cut(s) 174
RsaI GTAC 1 cut(s) 618
RsaNI GTAC 1 cut(s) 617
SacI GAGCTC 2 cut(s) 42, 491
SapI GCTCTTC 1 cut(s) 792
SaqAI TTAA 2 cut(s) 255, 414
SatI GCNGC 3 cut(s) 145, 172, 447
Sau3AI GATC 4 cut(s) 31, 300, 481, 577
SduI GDGCHC 2 cut(s) 42, 491
SfaNI GCATC 2 cut(s) 532, 748
Sse9I AATT 3 cut(s) 257, 459, 708
SsiI CCGC 3 cut(s) 145, 169, 737
SspI AATATT 1 cut(s) 307
SspMI CTAG 2 cut(s) 35, 296
SstI GAGCTC 2 cut(s) 42, 491
StyI CCWWGG 2 cut(s) 295, 663
TaaI ACNGT 3 cut(s) 568, 744, 754
TaiI ACGT 1 cut(s) 386
TaqI TCGA 1 cut(s) 694
TasI AATT 3 cut(s) 257, 459, 708
TauI GCSGC 1 cut(s) 147
TfiI GAWTC 1 cut(s) 77
Tru1I TTAA 2 cut(s) 255, 414
Tru9I TTAA 2 cut(s) 255, 414
TscAI CASTG 1 cut(s) 145
TseI GCWGC 2 cut(s) 171, 446
TspDTI ATGAA 3 cut(s) 241, 331, 352
TspGWI ACGGA 1 cut(s) 679
TspRI CASTG 1 cut(s) 145
Van91I CCANNNNNTGG 1 cut(s) 533
XapI RAATTY 1 cut(s) 257
XbaI TCTAGA 1 cut(s) 34
XcmI CCANNNNNNNNNTGG 2 cut(s) 137, 635
XmaJI CCTAGG 1 cut(s) 295
XspI CTAG 2 cut(s) 35, 296
Zsp2I ATGCAT 1 cut(s) 547
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.