Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0014167

Physical Location & Seq

Genomic Coordinates Forward (+)

34778778 .. 34782860

Gene Structure 4083 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G389400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1650 bp

ATGGGGGAAACAGGCCACCACCACCAGCAGCAGCCTCCGCCAGTACTGGTGGCTCCGCCGCGATCTCAGATGCCTCTTGGGGCGGCAAGGGGTCCCATTTGGACTCCAACTGAGCAACTCCATCAGCTTCAGTTTTGCATCCACTCCAACCCCTCTTGGCCGGAAACATTCCTACTGGCTTTTCAGCACTATATCGTTATGCTTGGATCCATAGTTATAATTGCAAGTACTTTTGTGCCTCGTATGGGTGGGGATCATGGTGATAAAGCCCGTGTGATTCAGACGATGCTGTTTATGGCAGCAATAAACACATTGCTTCAAACAATCCTCGGGACAAGGCTTCCAACAGTGATGACTGCTTCATTTGCTTTTACCCTGCCAGTGTTGTCAATCATCAATGATTATTCTGATCGGACTTTCAGAAGTGAACACGAGAGGTTTGAGGTCACAATGAGAACGATTCAAGGGTCACTTATTGTTTCTTCCTTCGTCAACATCTTCATTGGATTTAGTAAGGCATGGGGGAACTTTACAAGATTCTTTAGTCCCATTGTTATCGTGCCAGTGGTTTGTGTGGTTGGTCTTGGTCTTTTTGCAAGGGGCTTTCCACTTCTTGGTAACTGTGTGGAGATTGGCCTGCCTATGCTGATTCTGCTGGTCATTTCCCAACAGTATCTGAAGCGTGTTTTTCCTAGAGCCCATAACATACTTGAGAGGTTTGCTTTGCTTCTCTGCATTGGGCTTATCTGGGCATTTGCTGCTATCCTCACTGAGTCTGGTGCTTATAACAATGCTAAAGAGCAGACTAAACAAAGTTGCCGTACAGATCGCACTTTCCTTATATCCTCTGCTCCTTGGGTTAGAATCCCATACCCATTTCAATGGGGTAAACCCATATTCAGAGCGAGCCATGTCTTTGGCATGATGGGAGCAGCACTTGTTACATCTGCAGAGTCAACTGGAACATATTTTGCAGCAGCACGACTTGCAGGTGCTACGCCCCCTCCAGCAAGTGTAATAAGCCAAAGTATTGGCCTACAGGGTGTTGGAATGCTGCTTGAAGGAATTTTTGGTGCTGCTGTTGGTACAACTGCATCCGTTGAAAATGTTGGCCTCCTTGGATTGACGCACATAGGGAGCAGGAGAGTGGTGCAGATTTCAACTGCTTTCATGTTCTTCTTCTCTATATTTGGGAAGTTTGGTGCTTTCTTTGCATCTATTCCTTTGCCGATATTTGCTGCCATATACTGCGTGTTATTTGGGATTGTTGCTGCTGTTGGGATCACGTTCATACAGTTTACAAATAATAATTCCTTGAGAAACATCTATGTTTTGGGTCTTTCCCTGTTTCTTGGGATATCAATACCTCAATACTTTATCAGTAACACGACTCCAAACGGTGTCGGACCAGTTAGAACTGATGGAATATGGTTTGATGACATAGTGAACACGATCTTCTCATCGAGCCCGACAGTGGCAATAATCGTCGGGACGCTGCTTGATAACACACTTGATGCCAAGTACTCAGTTGATGACAGAGGGCTTGCATGGTGGAGACCCTTCCAAAGCAGGAAGGGAGATTCTAGAAATGAGGAATTTTACAGTCTACCTGTTAGGATACGCGAGTACATTCCCTCCAGATATCTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005345 GO:0005350 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006810 GO:0006811 GO:0006812 GO:0006855 GO:0006863 GO:0008150 GO:0008324 GO:0009506 GO:0015075 GO:0015205 GO:0015207 GO:0015208 GO:0015210 GO:0015238 GO:0015291 GO:0015293 GO:0015294 GO:0015318 GO:0015851 GO:0015853 GO:0015854 GO:0015855 GO:0015857 GO:0015893 GO:0016020 GO:0022804 GO:0022857 GO:0022890 GO:0030054 GO:0034220 GO:0035344 GO:0042221 GO:0042493 GO:0044464 GO:0050896 GO:0051179 GO:0051234 GO:0055044 GO:0055085 GO:0071702 GO:0071705 GO:0071944 GO:0072530 GO:0072531 GO:0098655 GO:0098657 GO:0098702 GO:0098710 GO:0098721 GO:0098739 GO:1903716 GO:1903791 GO:1904082 GO:1904823

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Xan_ur_permease

Protein Analysis

550

Amino Acids

60.44

Weight (kDa)

9.42

Isoelectric Point (pI)

36.44

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014167)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G26510
fragaria_vesca	FvH4_2g40710 FvH4_2g40710 FvH4_2g40710
malus_domestica	MD08G1041700.v1.1 MD15G1035100.v1.1
prunus_persica	Prupe.1G389400_v2.0.a1
pyrus_communis	pycom08g03370 pycom15g03230
rosa_chinensis	RchiOBHm_Chr6g0299891
rosa_laevigata	RLG00000011378
rosa_multiflora	Rmu_ssc0000158.1_g000015
rosa_roxburghii	Rroxscaffold_7G00168300
rosa_rugosa	Rorug06G0293000
rosa_samantha	Rh6AG404400 Rh6CG418700
rosa_wichuraiana	Rw6G035370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	218, 786
AarI	CACCTGC	1 cut(s)	980
Acc36I	ACCTGC	1 cut(s)	980
AccB7I	CCANNNNNTGG	1 cut(s)	614
AccI	GTMKAC	1 cut(s)	1606
AccII	CGCG	2 cut(s)	61, 1623
AciI	CCGC	4 cut(s)	38, 56, 59, 83
AclWI	GGATC	4 cut(s)	201, 214, 261, 1289
AcoI	YGGCCR	1 cut(s)	158
AcsI	RAATTY	2 cut(s)	1065, 1595
AcuI	CTGAAG	2 cut(s)	113, 698
AfaI	GTAC	6 cut(s)	45, 229, 823, 1087, 1523, 1628
AfiI	CCNNNNNNNGG	3 cut(s)	245, 614, 1474
AgsI	TTSAA	6 cut(s)	320, 464, 881, 1061, 1103, 1161
AjuI	GAANNNNNNNTTGG	2 cut(s)	1053, 1085
AluBI	AGCT	1 cut(s)	127
AluI	AGCT	1 cut(s)	127
Alw26I	GTCTC	1 cut(s)	1549
AlwI	GGATC	4 cut(s)	201, 214, 261, 1289
AlwNI	CAGNNNCTG	1 cut(s)	676
Ama87I	CYCGRG	1 cut(s)	329
AoxI	GGCC	5 cut(s)	13, 158, 634, 1033, 1111
ApoI	RAATTY	2 cut(s)	1065, 1595
AspS9I	GGNCC	2 cut(s)	92, 1406
AsuHPI	GGTGA	1 cut(s)	272
AvaI	CYCGRG	1 cut(s)	329
AvaII	GGWCC	2 cut(s)	92, 1406
BaeI	ACNNNNGTAYC	2 cut(s)	1610, 1643
BamHI	GGATCC	1 cut(s)	206
BanII	GRGCYC	2 cut(s)	700, 1469
BauI	CACGAG	1 cut(s)	431
BccI	CCATC	3 cut(s)	129, 919, 1415
BceAI	ACGGC	1 cut(s)	804
BciVI	GTATCC	1 cut(s)	1611
BcoDI	GTCTC	1 cut(s)	1549
BfaI	CTAG	2 cut(s)	693, 1584
BfmI	CTRYAG	2 cut(s)	948, 1037
BfuAI	ACCTGC	1 cut(s)	980
BfuI	GTATCC	1 cut(s)	1611
BmcAI	AGTACT	3 cut(s)	45, 229, 1523
Bme18I	GGWCC	2 cut(s)	92, 1406
BmeT110I	CYCGRG	1 cut(s)	329
BmgT120I	GGNCC	2 cut(s)	92, 1406
BmiI	GGNNCC	4 cut(s)	54, 93, 94, 208
BmsI	GCATC	6 cut(s)	60, 147, 276, 1103, 1223, 1504
BpmI	CTGGAG	2 cut(s)	990, 1621
BpuEI	CTTGAG	2 cut(s)	731, 1336
BsaI	GGTCTC	1 cut(s)	1549
BsaJI	CCNNGG	3 cut(s)	328, 854, 1117
BsaXI	ACNNNNNCTCC	4 cut(s)	988, 1018, 1619, 1649
Bsc4I	CCNNNNNNNGG	3 cut(s)	245, 614, 1474
Bse1I	ACTGG	7 cut(s)	41, 51, 180, 380, 563, 964, 1409
Bse3DI	GCAATG	1 cut(s)	311
BseDI	CCNNGG	3 cut(s)	328, 854, 1117
BseGI	GGATG	2 cut(s)	138, 1094
BseLI	CCNNNNNNNGG	3 cut(s)	245, 614, 1474
BseMI	GCAATG	1 cut(s)	311
BseMII	CTCAG	4 cut(s)	80, 102, 762, 1539
BseNI	ACTGG	7 cut(s)	41, 51, 180, 380, 563, 964, 1409
BsgI	GTGCAG	1 cut(s)	1172
Bsh1236I	CGCG	2 cut(s)	61, 1623
BshFI	GGCC	5 cut(s)	15, 160, 636, 1035, 1113
BsiHKCI	CYCGRG	1 cut(s)	329
BsiSI	CCGG	1 cut(s)	161
BslFI	GGGAC	4 cut(s)	78, 346, 531, 1504
BslI	CCNNNNNNNGG	3 cut(s)	245, 614, 1474
BsmAI	GTCTC	1 cut(s)	1549
BsmFI	GGGAC	4 cut(s)	78, 346, 531, 1504
BsmI	GAATGC	1 cut(s)	1056
BsnI	GGCC	5 cut(s)	15, 160, 636, 1035, 1113
Bso31I	GGTCTC	1 cut(s)	1549
BsoBI	CYCGRG	1 cut(s)	329
Bsp1286I	GDGCHC	2 cut(s)	700, 1469
Bsp143I	GATC	7 cut(s)	62, 206, 253, 409, 826, 1281, 1452
BspACI	CCGC	4 cut(s)	38, 56, 59, 83
BspANI	GGCC	5 cut(s)	15, 160, 636, 1035, 1113
BspCNI	CTCAG	4 cut(s)	79, 103, 763, 1538
BspFNI	CGCG	2 cut(s)	61, 1623
BspLI	GGNNCC	4 cut(s)	54, 93, 94, 208
BspMAI	CTGCAG	1 cut(s)	952
BspMI	ACCTGC	1 cut(s)	980
BspPI	GGATC	4 cut(s)	201, 214, 261, 1289
BspTNI	GGTCTC	1 cut(s)	1549
BsrDI	GCAATG	1 cut(s)	311
BsrI	ACTGG	7 cut(s)	41, 51, 180, 380, 563, 964, 1409
BssECI	CCNNGG	3 cut(s)	328, 854, 1117
BssMI	GATC	7 cut(s)	62, 206, 253, 409, 826, 1281, 1452
BssSI	CACGAG	1 cut(s)	431
BssT1I	CCWWGG	2 cut(s)	854, 1117
Bst2BI	CACGAG	1 cut(s)	431
Bst4CI	ACNGT	7 cut(s)	349, 623, 672, 1296, 1400, 1474, 1604
BstAPI	GCANNNNNTGC	2 cut(s)	758, 986
BstC8I	GCNNGC	3 cut(s)	638, 907, 1545
BstDEI	CTNAG	4 cut(s)	66, 111, 771, 1525
BstF5I	GGATG	2 cut(s)	138, 1094
BstFNI	CGCG	2 cut(s)	61, 1623
BstKTI	GATC	7 cut(s)	65, 209, 256, 412, 829, 1284, 1455
BstMAI	GTCTC	1 cut(s)	1549
BstMBI	GATC	7 cut(s)	62, 206, 253, 409, 826, 1281, 1452
BstMWI	GCNNNNNNNGC	6 cut(s)	37, 365, 652, 758, 986, 1211
BstSFI	CTRYAG	2 cut(s)	948, 1037
BstUI	CGCG	2 cut(s)	61, 1623
BstX2I	RGATCY	1 cut(s)	206
BstXI	CCANNNNNNTGG	3 cut(s)	882, 917, 1031
BstYI	RGATCY	1 cut(s)	206
BsuI	GTATCC	1 cut(s)	1611
BsuRI	GGCC	5 cut(s)	15, 160, 636, 1035, 1113
BtsCI	GGATG	2 cut(s)	138, 1094
BtsIMutI	CAGTG	5 cut(s)	354, 387, 570, 768, 1479
BveI	ACCTGC	1 cut(s)	980
Cac8I	GCNNGC	3 cut(s)	638, 907, 1545
CaiI	CAGNNNCTG	1 cut(s)	676
Cfr13I	GGNCC	2 cut(s)	92, 1406
CseI	GACGC	2 cut(s)	1135, 1501
Csp6I	GTAC	6 cut(s)	44, 228, 822, 1086, 1522, 1627
CviAII	CATG	6 cut(s)	257, 519, 911, 922, 1171, 1548
CviQI	GTAC	6 cut(s)	44, 228, 822, 1086, 1522, 1627
DdeI	CTNAG	4 cut(s)	66, 111, 771, 1525
DpnI	GATC	7 cut(s)	64, 208, 255, 411, 828, 1283, 1454
DpnII	GATC	7 cut(s)	62, 206, 253, 409, 826, 1281, 1452
EaeI	YGGCCR	1 cut(s)	158
EciI	GGCGGA	2 cut(s)	27, 45
Eco130I	CCWWGG	2 cut(s)	854, 1117
Eco24I	GRGCYC	2 cut(s)	700, 1469
Eco31I	GGTCTC	1 cut(s)	1549
Eco32I	GATATC	2 cut(s)	1359, 1643
Eco47I	GGWCC	2 cut(s)	92, 1406
Eco57I	CTGAAG	2 cut(s)	113, 698
Eco88I	CYCGRG	1 cut(s)	329
EcoO109I	RGGNCCY	1 cut(s)	92
EcoRV	GATATC	2 cut(s)	1359, 1643
EcoT14I	CCWWGG	2 cut(s)	854, 1117
EcoT38I	GRGCYC	2 cut(s)	700, 1469
ErhI	CCWWGG	2 cut(s)	854, 1117
FaeI	CATG	6 cut(s)	260, 522, 914, 925, 1174, 1551
FalI	AAGNNNNNCTT	2 cut(s)	456, 488
FaqI	GGGAC	4 cut(s)	78, 346, 531, 1504
FatI	CATG	6 cut(s)	256, 518, 910, 921, 1170, 1547
FblI	GTMKAC	1 cut(s)	1606
FokI	GGATG	2 cut(s)	125, 1081
FriOI	GRGCYC	2 cut(s)	700, 1469
FspBI	CTAG	2 cut(s)	693, 1584
GsuI	CTGGAG	2 cut(s)	990, 1621
HaeIII	GGCC	5 cut(s)	15, 160, 636, 1035, 1113
HapII	CCGG	1 cut(s)	161
HgaI	GACGC	2 cut(s)	1135, 1501
Hin1II	CATG	6 cut(s)	260, 522, 914, 925, 1174, 1551
HincII	GTYRAC	2 cut(s)	493, 957
HindII	GTYRAC	2 cut(s)	493, 957
HpaII	CCGG	1 cut(s)	161
HphI	GGTGA	1 cut(s)	272
Hpy166II	GTNNAC	7 cut(s)	428, 493, 890, 957, 1299, 1447, 1607
Hpy188I	TCNGA	8 cut(s)	69, 282, 409, 414, 422, 678, 902, 1406
Hpy188III	TCNNGA	4 cut(s)	331, 1489, 1584, 1638
Hpy8I	GTNNAC	7 cut(s)	428, 493, 890, 957, 1299, 1447, 1607
Hpy99I	CGWCG	1 cut(s)	1490
HpyAV	CCTTC	4 cut(s)	496, 1055, 1567, 1570
HpyCH4III	ACNGT	7 cut(s)	349, 623, 672, 1296, 1400, 1474, 1604
HpyCH4IV	ACGT	1 cut(s)	1286
HpyF10VI	GCNNNNNNNGC	6 cut(s)	37, 365, 652, 758, 986, 1211
HpyF3I	CTNAG	4 cut(s)	66, 111, 771, 1525
HpySE526I	ACGT	1 cut(s)	1286
Hsp92II	CATG	6 cut(s)	260, 522, 914, 925, 1174, 1551
KflI	GGGWCCC	1 cut(s)	92
Kzo9I	GATC	7 cut(s)	62, 206, 253, 409, 826, 1281, 1452
LmnI	GCTCC	4 cut(s)	58, 856, 929, 1137
LweI	GCATC	6 cut(s)	60, 147, 276, 1103, 1223, 1504
MaeI	CTAG	2 cut(s)	693, 1584
MaeII	ACGT	1 cut(s)	1286
MaeIII	GTNAC	5 cut(s)	445, 468, 617, 940, 1382
MalI	GATC	7 cut(s)	64, 208, 255, 411, 828, 1283, 1454
MboI	GATC	7 cut(s)	62, 206, 253, 409, 826, 1281, 1452
MboII	GAAGA	5 cut(s)	474, 490, 1168, 1171, 1447
MflI	RGATCY	1 cut(s)	206
MhlI	GDGCHC	2 cut(s)	700, 1469
MluCI	AATT	4 cut(s)	219, 1065, 1309, 1595
MlyI	GAGTC	4 cut(s)	97, 782, 962, 1384
MmeI	TCCRAC	5 cut(s)	131, 171, 368, 1027, 1384
MslI	CAYNNNNRTG	1 cut(s)	880
MspI	CCGG	1 cut(s)	161
Mva1269I	GAATGC	1 cut(s)	1056
MvnI	CGCG	2 cut(s)	61, 1623
MwoI	GCNNNNNNNGC	6 cut(s)	37, 365, 652, 758, 986, 1211
NdeII	GATC	7 cut(s)	62, 206, 253, 409, 826, 1281, 1452
NlaIII	CATG	6 cut(s)	260, 522, 914, 925, 1174, 1551
NlaIV	GGNNCC	4 cut(s)	54, 93, 94, 208
NmuCI	GTSAC	2 cut(s)	445, 468
PaqCI	CACCTGC	1 cut(s)	980
PctI	GAATGC	1 cut(s)	1056
PfeI	GAWTC	6 cut(s)	277, 460, 537, 649, 864, 1580
PflMI	CCANNNNNTGG	1 cut(s)	614
PleI	GAGTC	4 cut(s)	97, 781, 961, 1384
PpsI	GAGTC	4 cut(s)	97, 781, 961, 1384
PpuMI	RGGWCCY	1 cut(s)	92
PsiI	TTATAA	2 cut(s)	218, 786
Psp5II	RGGWCCY	1 cut(s)	92
PspN4I	GGNNCC	4 cut(s)	54, 93, 94, 208
PspPI	GGNCC	2 cut(s)	92, 1406
PspPPI	RGGWCCY	1 cut(s)	92
PstI	CTGCAG	1 cut(s)	952
PstNI	CAGNNNCTG	1 cut(s)	676
PsuI	RGATCY	1 cut(s)	206
RsaI	GTAC	6 cut(s)	45, 229, 823, 1087, 1523, 1628
RsaNI	GTAC	6 cut(s)	44, 228, 822, 1086, 1522, 1627
RseI	CAYNNNNRTG	1 cut(s)	880
Sau3AI	GATC	7 cut(s)	62, 206, 253, 409, 826, 1281, 1452
Sau96I	GGNCC	2 cut(s)	92, 1406
ScaI	AGTACT	3 cut(s)	45, 229, 1523
SchI	GAGTC	4 cut(s)	97, 782, 962, 1384
SduI	GDGCHC	2 cut(s)	700, 1469
SetI	ASST	8 cut(s)	129, 440, 447, 719, 994, 1289, 1369, 1612
SfaNI	GCATC	6 cut(s)	60, 147, 276, 1103, 1223, 1504
SfcI	CTRYAG	2 cut(s)	948, 1037
SinI	GGWCC	2 cut(s)	92, 1406
SmiMI	CAYNNNNRTG	1 cut(s)	880
SmlI	CTYRAG	2 cut(s)	710, 1315
SmoI	CTYRAG	2 cut(s)	710, 1315
Sse9I	AATT	4 cut(s)	219, 1065, 1309, 1595
SsiI	CCGC	4 cut(s)	38, 56, 59, 83
SspMI	CTAG	2 cut(s)	693, 1584
StyI	CCWWGG	2 cut(s)	854, 1117
TaaI	ACNGT	7 cut(s)	349, 623, 672, 1296, 1400, 1474, 1604
TaiI	ACGT	1 cut(s)	1289
TaqI	TCGA	1 cut(s)	1463
TasI	AATT	4 cut(s)	219, 1065, 1309, 1595
TatI	WGTACW	4 cut(s)	43, 227, 1521, 1626
TauI	GCSGC	2 cut(s)	61, 86
TfiI	GAWTC	6 cut(s)	277, 460, 537, 649, 864, 1580
TscAI	CASTG	5 cut(s)	354, 387, 570, 775, 1479
TseFI	GTSAC	2 cut(s)	445, 468
Tsp45I	GTSAC	2 cut(s)	445, 468
TspDTI	ATGAA	4 cut(s)	351, 490, 1159, 1279
TspGWI	ACGGA	1 cut(s)	1087
TspRI	CASTG	5 cut(s)	354, 387, 570, 775, 1479
Van91I	CCANNNNNTGG	1 cut(s)	614
VpaK11BI	GGWCC	2 cut(s)	92, 1406
XapI	RAATTY	2 cut(s)	1065, 1595
XbaI	TCTAGA	1 cut(s)	1583
XmiI	GTMKAC	1 cut(s)	1606
XspI	CTAG	2 cut(s)	693, 1584
ZrmI	AGTACT	3 cut(s)	45, 229, 1523

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.