Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB NOP family
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G26180 AT5G26180 AT5G26180 AT5G26180 AT5G26180 |
| fragaria_vesca | FvH4_2g31380 FvH4_2g31380 |
| malus_domestica | MD15G1053900.v1.1 |
| prunus_persica | Prupe.1G407400_v2.0.a1 |
| pyrus_communis | pycom15g05080 |
| rosa_chinensis | RchiOBHm_Chr6g0311441 |
| rosa_laevigata | RLG00000010406 |
| rosa_multiflora | Rmu_sc0006915.1_g000009 Rmu_sc0013619.1_g000002 Rmu_sc0015790.1_g000002 |
| rosa_roxburghii | Rroxscaffold_7G00157610 |
| rosa_rugosa | Rorug06G0389100 |
| rosa_samantha | Rh6AG503400 Rh6BG514000 Rh6CG519800 Rh6DG506000 |
| rosa_wichuraiana | Rw6G043840 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 1464 |
| AccB1I | GGYRCC | 1 cut(s) | 1242 |
| AccI | GTMKAC | 1 cut(s) | 321 |
| AccII | CGCG | 3 cut(s) | 7, 508, 945 |
| AccIII | TCCGGA | 1 cut(s) | 1114 |
| AciI | CCGC | 8 cut(s) | 29, 41, 110, 276, 368, 380, 506, 1073 |
| AclI | AACGTT | 1 cut(s) | 841 |
| AclWI | GGATC | 4 cut(s) | 917, 953, 982, 1289 |
| AcoI | YGGCCR | 2 cut(s) | 42, 349 |
| AcuI | CTGAAG | 1 cut(s) | 939 |
| AcyI | GRCGYC | 2 cut(s) | 64, 144 |
| AfaI | GTAC | 1 cut(s) | 771 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 198 |
| AflII | CTTAAG | 1 cut(s) | 70 |
| AflIII | ACRYGT | 1 cut(s) | 264 |
| AjiI | CACGTC | 1 cut(s) | 265 |
| AjnI | CCWGG | 4 cut(s) | 351, 594, 754, 1024 |
| AleI | CACNNNNGTG | 1 cut(s) | 1248 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1214, 1246 |
| Alw21I | GWGCWC | 2 cut(s) | 1349, 1432 |
| Alw26I | GTCTC | 4 cut(s) | 135, 539, 845, 1259 |
| AlwI | GGATC | 4 cut(s) | 917, 953, 982, 1289 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 755 |
| Aor13HI | TCCGGA | 1 cut(s) | 1114 |
| AoxI | GGCC | 4 cut(s) | 42, 273, 349, 1074 |
| ApeKI | GCWGC | 7 cut(s) | 38, 419, 701, 704, 779, 1034, 1199 |
| AscI | GGCGCGCC | 1 cut(s) | 5 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 572 |
| AspLEI | GCGC | 7 cut(s) | 7, 9, 153, 945, 947, 1274, 1465 |
| AspS9I | GGNCC | 1 cut(s) | 188 |
| AsuC2I | CCSGG | 2 cut(s) | 624, 1259 |
| AsuHPI | GGTGA | 3 cut(s) | 322, 367, 1369 |
| AvaII | GGWCC | 1 cut(s) | 188 |
| BalI | TGGCCA | 1 cut(s) | 351 |
| BanI | GGYRCC | 1 cut(s) | 1242 |
| BanII | GRGCYC | 2 cut(s) | 1349, 1432 |
| Bbv12I | GWGCWC | 2 cut(s) | 1349, 1432 |
| BbvI | GCAGC | 7 cut(s) | 50, 431, 713, 716, 791, 1021, 1186 |
| BccI | CCATC | 1 cut(s) | 1021 |
| BceAI | ACGGC | 3 cut(s) | 446, 536, 1422 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1454, 1488 |
| BciT130I | CCWGG | 4 cut(s) | 353, 596, 756, 1026 |
| BclI | TGATCA | 1 cut(s) | 640 |
| BcnI | CCSGG | 2 cut(s) | 624, 1259 |
| BcoDI | GTCTC | 4 cut(s) | 135, 539, 845, 1259 |
| BfaI | CTAG | 3 cut(s) | 99, 425, 1094 |
| BfmI | CTRYAG | 2 cut(s) | 36, 413 |
| BfoI | RGCGCY | 2 cut(s) | 154, 1275 |
| BfrI | CTTAAG | 1 cut(s) | 70 |
| BlpI | GCTNAGC | 1 cut(s) | 748 |
| Bme1390I | CCNGG | 6 cut(s) | 353, 596, 624, 756, 1026, 1259 |
| Bme18I | GGWCC | 1 cut(s) | 188 |
| BmgBI | CACGTC | 1 cut(s) | 265 |
| BmgT120I | GGNCC | 1 cut(s) | 188 |
| BmiI | GGNNCC | 4 cut(s) | 166, 190, 600, 1244 |
| BmrFI | CCNGG | 6 cut(s) | 353, 596, 624, 756, 1026, 1259 |
| BmsI | GCATC | 3 cut(s) | 367, 730, 1211 |
| BoxI | GACNNNNGTC | 1 cut(s) | 551 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 1075, 1107, 1419, 1451 |
| BpmI | CTGGAG | 1 cut(s) | 1008 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 748 |
| BpuMI | CCSGG | 2 cut(s) | 624, 1259 |
| BsaBI | GATNNNNATC | 1 cut(s) | 645 |
| BsaHI | GRCGYC | 2 cut(s) | 64, 144 |
| BsaI | GGTCTC | 1 cut(s) | 1259 |
| BsaJI | CCNNGG | 4 cut(s) | 136, 936, 1249, 1299 |
| BsaWI | WCCGGW | 1 cut(s) | 1114 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 198 |
| Bse118I | RCCGGY | 1 cut(s) | 60 |
| Bse1I | ACTGG | 2 cut(s) | 154, 1224 |
| Bse3DI | GCAATG | 2 cut(s) | 1323, 1489 |
| Bse8I | GATNNNNATC | 1 cut(s) | 645 |
| BseAI | TCCGGA | 1 cut(s) | 1114 |
| BseBI | CCWGG | 4 cut(s) | 353, 596, 756, 1026 |
| BseDI | CCNNGG | 4 cut(s) | 136, 936, 1249, 1299 |
| BseGI | GGATG | 5 cut(s) | 382, 544, 595, 1123, 1202 |
| BseJI | GATNNNNATC | 1 cut(s) | 645 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 198 |
| BseMI | GCAATG | 2 cut(s) | 1323, 1489 |
| BseMII | CTCAG | 2 cut(s) | 207, 762 |
| BseNI | ACTGG | 2 cut(s) | 154, 1224 |
| BsePI | GCGCGC | 2 cut(s) | 5, 943 |
| BseRI | GAGGAG | 1 cut(s) | 1357 |
| BseX3I | CGGCCG | 1 cut(s) | 42 |
| BseXI | GCAGC | 7 cut(s) | 50, 431, 713, 716, 791, 1021, 1186 |
| Bsh1236I | CGCG | 3 cut(s) | 7, 508, 945 |
| Bsh1285I | CGRYCG | 2 cut(s) | 45, 372 |
| BshFI | GGCC | 4 cut(s) | 44, 275, 351, 1076 |
| BshNI | GGYRCC | 1 cut(s) | 1242 |
| BsiEI | CGRYCG | 2 cut(s) | 45, 372 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1349, 1432 |
| BsiSI | CCGG | 4 cut(s) | 61, 623, 1115, 1259 |
| BslFI | GGGAC | 2 cut(s) | 174, 994 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 198 |
| BsmAI | GTCTC | 4 cut(s) | 135, 539, 845, 1259 |
| BsmBI | CGTCTC | 1 cut(s) | 135 |
| BsmFI | GGGAC | 2 cut(s) | 174, 994 |
| BsmI | GAATGC | 1 cut(s) | 1283 |
| BsnI | GGCC | 4 cut(s) | 44, 275, 351, 1076 |
| Bso31I | GGTCTC | 1 cut(s) | 1259 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1349, 1432 |
| Bsp13I | TCCGGA | 1 cut(s) | 1114 |
| Bsp1407I | TGTACA | 1 cut(s) | 769 |
| Bsp143I | GATC | 8 cut(s) | 225, 631, 640, 922, 958, 974, 1000, 1294 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 748 |
| BspACI | CCGC | 8 cut(s) | 29, 41, 110, 276, 368, 380, 506, 1073 |
| BspANI | GGCC | 4 cut(s) | 44, 275, 351, 1076 |
| BspCNI | CTCAG | 2 cut(s) | 206, 761 |
| BspEI | TCCGGA | 1 cut(s) | 1114 |
| BspFNI | CGCG | 3 cut(s) | 7, 508, 945 |
| BspLI | GGNNCC | 4 cut(s) | 166, 190, 600, 1244 |
| BspMAI | CTGCAG | 2 cut(s) | 40, 417 |
| BspPI | GGATC | 4 cut(s) | 917, 953, 982, 1289 |
| BspT107I | GGYRCC | 1 cut(s) | 1242 |
| BspTI | CTTAAG | 1 cut(s) | 70 |
| BspTNI | GGTCTC | 1 cut(s) | 1259 |
| BsrDI | GCAATG | 2 cut(s) | 1323, 1489 |
| BsrFI | RCCGGY | 1 cut(s) | 60 |
| BsrGI | TGTACA | 1 cut(s) | 769 |
| BsrI | ACTGG | 2 cut(s) | 154, 1224 |
| BssAI | RCCGGY | 1 cut(s) | 60 |
| BssECI | CCNNGG | 4 cut(s) | 136, 936, 1249, 1299 |
| BssHII | GCGCGC | 2 cut(s) | 5, 943 |
| BssMI | GATC | 8 cut(s) | 225, 631, 640, 922, 958, 974, 1000, 1294 |
| BssNAI | GTATAC | 1 cut(s) | 322 |
| BssNI | GRCGYC | 2 cut(s) | 64, 144 |
| BssT1I | CCWWGG | 3 cut(s) | 136, 936, 1299 |
| Bst1107I | GTATAC | 1 cut(s) | 322 |
| Bst2UI | CCWGG | 4 cut(s) | 353, 596, 756, 1026 |
| Bst4CI | ACNGT | 3 cut(s) | 188, 769, 1250 |
| Bst6I | CTCTTC | 2 cut(s) | 449, 459 |
| BstACI | GRCGYC | 2 cut(s) | 64, 144 |
| BstAFI | CTTAAG | 1 cut(s) | 70 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 710 |
| BstAUI | TGTACA | 1 cut(s) | 769 |
| BstC8I | GCNNGC | 7 cut(s) | 7, 417, 688, 745, 945, 1071, 1283 |
| BstDEI | CTNAG | 4 cut(s) | 193, 748, 904, 955 |
| BstDSI | CCRYGG | 1 cut(s) | 1249 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 196 |
| BstF5I | GGATG | 5 cut(s) | 382, 544, 595, 1123, 1202 |
| BstFNI | CGCG | 3 cut(s) | 7, 508, 945 |
| BstH2I | RGCGCY | 2 cut(s) | 154, 1275 |
| BstHHI | GCGC | 7 cut(s) | 7, 9, 153, 945, 947, 1274, 1465 |
| BstKTI | GATC | 8 cut(s) | 228, 634, 643, 925, 961, 977, 1003, 1297 |
| BstMAI | GTCTC | 4 cut(s) | 135, 539, 845, 1259 |
| BstMBI | GATC | 8 cut(s) | 225, 631, 640, 922, 958, 974, 1000, 1294 |
| BstMCI | CGRYCG | 2 cut(s) | 45, 372 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 13, 95, 416, 425, 710, 749, 1278, 1406 |
| BstNI | CCWGG | 4 cut(s) | 353, 596, 756, 1026 |
| BstNSI | RCATGY | 3 cut(s) | 747, 1146, 1463 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 551 |
| BstSCI | CCNGG | 6 cut(s) | 351, 594, 622, 754, 1024, 1257 |
| BstSFI | CTRYAG | 2 cut(s) | 36, 413 |
| BstUI | CGCG | 3 cut(s) | 7, 508, 945 |
| BstV1I | GCAGC | 7 cut(s) | 50, 431, 713, 716, 791, 1021, 1186 |
| BstX2I | RGATCY | 3 cut(s) | 922, 958, 974 |
| BstYI | RGATCY | 3 cut(s) | 922, 958, 974 |
| BstZ17I | GTATAC | 1 cut(s) | 322 |
| BstZI | CGGCCG | 1 cut(s) | 42 |
| BsuRI | GGCC | 4 cut(s) | 44, 275, 351, 1076 |
| BtgI | CCRYGG | 1 cut(s) | 1249 |
| BtrI | CACGTC | 1 cut(s) | 265 |
| BtsCI | GGATG | 5 cut(s) | 382, 544, 595, 1123, 1202 |
| BtsIMutI | CAGTG | 1 cut(s) | 201 |
| Cac8I | GCNNGC | 7 cut(s) | 7, 417, 688, 745, 945, 1071, 1283 |
| CaiI | CAGNNNCTG | 1 cut(s) | 755 |
| CfoI | GCGC | 7 cut(s) | 7, 9, 153, 945, 947, 1274, 1465 |
| Cfr10I | RCCGGY | 1 cut(s) | 60 |
| Cfr13I | GGNCC | 1 cut(s) | 188 |
| CseI | GACGC | 4 cut(s) | 53, 152, 184, 386 |
| CsiI | ACCWGGT | 1 cut(s) | 594 |
| Csp6I | GTAC | 1 cut(s) | 770 |
| CviAII | CATG | 7 cut(s) | 76, 394, 638, 744, 893, 1143, 1460 |
| CviQI | GTAC | 1 cut(s) | 770 |
| DdeI | CTNAG | 4 cut(s) | 193, 748, 904, 955 |
| DpnI | GATC | 8 cut(s) | 227, 633, 642, 924, 960, 976, 1002, 1296 |
| DpnII | GATC | 8 cut(s) | 225, 631, 640, 922, 958, 974, 1000, 1294 |
| DraI | TTTAAA | 2 cut(s) | 846, 1447 |
| EaeI | YGGCCR | 2 cut(s) | 42, 349 |
| EagI | CGGCCG | 1 cut(s) | 42 |
| Eam1104I | CTCTTC | 2 cut(s) | 449, 459 |
| EarI | CTCTTC | 2 cut(s) | 449, 459 |
| Ecl136II | GAGCTC | 2 cut(s) | 1347, 1430 |
| EclXI | CGGCCG | 1 cut(s) | 42 |
| Eco130I | CCWWGG | 3 cut(s) | 136, 936, 1299 |
| Eco24I | GRGCYC | 2 cut(s) | 1349, 1432 |
| Eco31I | GGTCTC | 1 cut(s) | 1259 |
| Eco47I | GGWCC | 1 cut(s) | 188 |
| Eco52I | CGGCCG | 1 cut(s) | 42 |
| Eco53kI | GAGCTC | 2 cut(s) | 1347, 1430 |
| Eco57I | CTGAAG | 1 cut(s) | 939 |
| EcoICRI | GAGCTC | 2 cut(s) | 1347, 1430 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 196 |
| EcoRII | CCWGG | 4 cut(s) | 351, 594, 754, 1024 |
| EcoT14I | CCWWGG | 3 cut(s) | 136, 936, 1299 |
| EcoT22I | ATGCAT | 1 cut(s) | 745 |
| EcoT38I | GRGCYC | 2 cut(s) | 1349, 1432 |
| ErhI | CCWWGG | 3 cut(s) | 136, 936, 1299 |
| Esp3I | CGTCTC | 1 cut(s) | 135 |
| FaeI | CATG | 7 cut(s) | 79, 397, 641, 747, 896, 1146, 1463 |
| FaqI | GGGAC | 2 cut(s) | 174, 994 |
| FatI | CATG | 7 cut(s) | 75, 393, 637, 743, 892, 1142, 1459 |
| FauI | CCCGC | 1 cut(s) | 36 |
| FbaI | TGATCA | 1 cut(s) | 640 |
| FblI | GTMKAC | 1 cut(s) | 321 |
| FokI | GGATG | 5 cut(s) | 389, 551, 602, 1130, 1189 |
| FriOI | GRGCYC | 2 cut(s) | 1349, 1432 |
| FspAI | RTGCGCAY | 1 cut(s) | 1464 |
| FspBI | CTAG | 3 cut(s) | 99, 425, 1094 |
| FspI | TGCGCA | 1 cut(s) | 1464 |
| GlaI | GCGC | 7 cut(s) | 6, 8, 152, 944, 946, 1273, 1464 |
| GsuI | CTGGAG | 1 cut(s) | 1008 |
| HaeII | RGCGCY | 2 cut(s) | 154, 1275 |
| HaeIII | GGCC | 4 cut(s) | 44, 275, 351, 1076 |
| HapII | CCGG | 4 cut(s) | 61, 623, 1115, 1259 |
| HgaI | GACGC | 4 cut(s) | 53, 152, 184, 386 |
| HhaI | GCGC | 7 cut(s) | 7, 9, 153, 945, 947, 1274, 1465 |
| Hin1I | GRCGYC | 2 cut(s) | 64, 144 |
| Hin1II | CATG | 7 cut(s) | 79, 397, 641, 747, 896, 1146, 1463 |
| Hin6I | GCGC | 7 cut(s) | 5, 7, 151, 943, 945, 1272, 1463 |
| HinP1I | GCGC | 7 cut(s) | 5, 7, 151, 943, 945, 1272, 1463 |
| HincII | GTYRAC | 1 cut(s) | 1153 |
| HindII | GTYRAC | 1 cut(s) | 1153 |
| HindIII | AAGCTT | 1 cut(s) | 1067 |
| HinfI | GANTC | 3 cut(s) | 861, 1354, 1471 |
| HpaII | CCGG | 4 cut(s) | 61, 623, 1115, 1259 |
| HphI | GGTGA | 3 cut(s) | 322, 367, 1369 |
| Hpy166II | GTNNAC | 5 cut(s) | 184, 322, 772, 1135, 1153 |
| Hpy188I | TCNGA | 5 cut(s) | 55, 531, 860, 1290, 1363 |
| Hpy188III | TCNNGA | 6 cut(s) | 602, 737, 972, 1081, 1115, 1339 |
| Hpy8I | GTNNAC | 5 cut(s) | 184, 322, 772, 1135, 1153 |
| Hpy99I | CGWCG | 5 cut(s) | 164, 284, 402, 1385, 1408 |
| HpyAV | CCTTC | 5 cut(s) | 109, 265, 972, 1087, 1307 |
| HpyCH4III | ACNGT | 3 cut(s) | 188, 769, 1250 |
| HpyCH4IV | ACGT | 4 cut(s) | 264, 282, 841, 1374 |
| HpyCH4V | TGCA | 9 cut(s) | 38, 415, 676, 743, 779, 892, 992, 1202, 1457 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 13, 95, 416, 425, 710, 749, 1278, 1406 |
| HpyF3I | CTNAG | 4 cut(s) | 193, 748, 904, 955 |
| HpySE526I | ACGT | 4 cut(s) | 264, 282, 841, 1374 |
| Hsp92I | GRCGYC | 2 cut(s) | 64, 144 |
| Hsp92II | CATG | 7 cut(s) | 79, 397, 641, 747, 896, 1146, 1463 |
| HspAI | GCGC | 7 cut(s) | 5, 7, 151, 943, 945, 1272, 1463 |
| Kpn2I | TCCGGA | 1 cut(s) | 1114 |
| Ksp22I | TGATCA | 1 cut(s) | 640 |
| Kzo9I | GATC | 8 cut(s) | 225, 631, 640, 922, 958, 974, 1000, 1294 |
| LmnI | GCTCC | 8 cut(s) | 170, 718, 757, 1014, 1027, 1231, 1344, 1427 |
| Lsp1109I | GCAGC | 7 cut(s) | 50, 431, 713, 716, 791, 1021, 1186 |
| LweI | GCATC | 3 cut(s) | 367, 730, 1211 |
| MabI | ACCWGGT | 1 cut(s) | 594 |
| MaeI | CTAG | 3 cut(s) | 99, 425, 1094 |
| MaeII | ACGT | 4 cut(s) | 264, 282, 841, 1374 |
| MaeIII | GTNAC | 3 cut(s) | 65, 328, 1375 |
| MalI | GATC | 8 cut(s) | 227, 633, 642, 924, 960, 976, 1002, 1296 |
| MboI | GATC | 8 cut(s) | 225, 631, 640, 922, 958, 974, 1000, 1294 |
| MflI | RGATCY | 3 cut(s) | 922, 958, 974 |
| MhlI | GDGCHC | 2 cut(s) | 1349, 1432 |
| MlsI | TGGCCA | 1 cut(s) | 351 |
| MluCI | AATT | 3 cut(s) | 560, 572, 1480 |
| MluNI | TGGCCA | 1 cut(s) | 351 |
| MlyI | GAGTC | 2 cut(s) | 855, 1480 |
| Mox20I | TGGCCA | 1 cut(s) | 351 |
| Mph1103I | ATGCAT | 1 cut(s) | 745 |
| MroI | TCCGGA | 1 cut(s) | 1114 |
| MroXI | GAANNNNTTC | 1 cut(s) | 572 |
| MscI | TGGCCA | 1 cut(s) | 351 |
| MseI | TTAA | 8 cut(s) | 71, 171, 837, 845, 882, 1179, 1446, 1504 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1248 |
| Msp20I | TGGCCA | 1 cut(s) | 351 |
| MspA1I | CMGCKG | 2 cut(s) | 41, 368 |
| MspCI | CTTAAG | 1 cut(s) | 70 |
| MspI | CCGG | 4 cut(s) | 61, 623, 1115, 1259 |
| MspR9I | CCNGG | 6 cut(s) | 353, 596, 624, 756, 1026, 1259 |
| Mva1269I | GAATGC | 1 cut(s) | 1283 |
| MvaI | CCWGG | 4 cut(s) | 353, 596, 756, 1026 |
| MvnI | CGCG | 3 cut(s) | 7, 508, 945 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 13, 95, 416, 425, 710, 749, 1278, 1406 |
| NciI | CCSGG | 2 cut(s) | 624, 1259 |
| NdeII | GATC | 8 cut(s) | 225, 631, 640, 922, 958, 974, 1000, 1294 |
| NlaIII | CATG | 7 cut(s) | 79, 397, 641, 747, 896, 1146, 1463 |
| NlaIV | GGNNCC | 4 cut(s) | 166, 190, 600, 1244 |
| NmeAIII | GCCGAG | 1 cut(s) | 70 |
| NmuCI | GTSAC | 3 cut(s) | 65, 328, 1375 |
| NsbI | TGCGCA | 1 cut(s) | 1464 |
| NsiI | ATGCAT | 1 cut(s) | 745 |
| NspI | RCATGY | 3 cut(s) | 747, 1146, 1463 |
| OliI | CACNNNNGTG | 1 cut(s) | 1248 |
| PaeI | GCATGC | 1 cut(s) | 747 |
| PalAI | GGCGCGCC | 1 cut(s) | 5 |
| PauI | GCGCGC | 2 cut(s) | 5, 943 |
| PctI | GAATGC | 1 cut(s) | 1283 |
| PdmI | GAANNNNTTC | 1 cut(s) | 572 |
| PfeI | GAWTC | 1 cut(s) | 1354 |
| PfoI | TCCNGGA | 1 cut(s) | 754 |
| PleI | GAGTC | 2 cut(s) | 855, 1479 |
| PpsI | GAGTC | 2 cut(s) | 855, 1479 |
| PshAI | GACNNNNGTC | 1 cut(s) | 551 |
| Psp124BI | GAGCTC | 2 cut(s) | 1349, 1432 |
| Psp1406I | AACGTT | 1 cut(s) | 841 |
| Psp6I | CCWGG | 4 cut(s) | 351, 594, 754, 1024 |
| PspGI | CCWGG | 4 cut(s) | 351, 594, 754, 1024 |
| PspN4I | GGNNCC | 4 cut(s) | 166, 190, 600, 1244 |
| PspPI | GGNCC | 1 cut(s) | 188 |
| PstI | CTGCAG | 2 cut(s) | 40, 417 |
| PstNI | CAGNNNCTG | 1 cut(s) | 755 |
| PsuI | RGATCY | 3 cut(s) | 922, 958, 974 |
| PteI | GCGCGC | 2 cut(s) | 5, 943 |
| RsaI | GTAC | 1 cut(s) | 771 |
| RsaNI | GTAC | 1 cut(s) | 770 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1248 |
| SacI | GAGCTC | 2 cut(s) | 1349, 1432 |
| SaqAI | TTAA | 8 cut(s) | 71, 171, 837, 845, 882, 1179, 1446, 1504 |
| Sau3AI | GATC | 8 cut(s) | 225, 631, 640, 922, 958, 974, 1000, 1294 |
| Sau96I | GGNCC | 1 cut(s) | 188 |
| SchI | GAGTC | 2 cut(s) | 855, 1480 |
| ScrFI | CCNGG | 6 cut(s) | 353, 596, 624, 756, 1026, 1259 |
| SduI | GDGCHC | 2 cut(s) | 1349, 1432 |
| SexAI | ACCWGGT | 1 cut(s) | 594 |
| SfaNI | GCATC | 3 cut(s) | 367, 730, 1211 |
| SfcI | CTRYAG | 2 cut(s) | 36, 413 |
| SgsI | GGCGCGCC | 1 cut(s) | 5 |
| SinI | GGWCC | 1 cut(s) | 188 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1248 |
| SmlI | CTYRAG | 1 cut(s) | 70 |
| SmoI | CTYRAG | 1 cut(s) | 70 |
| SphI | GCATGC | 1 cut(s) | 747 |
| Sse9I | AATT | 3 cut(s) | 560, 572, 1480 |
| SsiI | CCGC | 8 cut(s) | 29, 41, 110, 276, 368, 380, 506, 1073 |
| SspI | AATATT | 1 cut(s) | 880 |
| SspMI | CTAG | 3 cut(s) | 99, 425, 1094 |
| SstI | GAGCTC | 2 cut(s) | 1349, 1432 |
| StyD4I | CCNGG | 6 cut(s) | 351, 594, 622, 754, 1024, 1257 |
| StyI | CCWWGG | 3 cut(s) | 136, 936, 1299 |
| TaaI | ACNGT | 3 cut(s) | 188, 769, 1250 |
| TaiI | ACGT | 4 cut(s) | 267, 285, 844, 1377 |
| TaqI | TCGA | 3 cut(s) | 738, 1266, 1403 |
| TasI | AATT | 3 cut(s) | 560, 572, 1480 |
| TatI | WGTACW | 1 cut(s) | 769 |
| TauI | GCSGC | 4 cut(s) | 44, 113, 278, 1076 |
| TfiI | GAWTC | 1 cut(s) | 1354 |
| Tru1I | TTAA | 8 cut(s) | 71, 171, 837, 845, 882, 1179, 1446, 1504 |
| Tru9I | TTAA | 8 cut(s) | 71, 171, 837, 845, 882, 1179, 1446, 1504 |
| TscAI | CASTG | 1 cut(s) | 201 |
| TseFI | GTSAC | 3 cut(s) | 65, 328, 1375 |
| TseI | GCWGC | 7 cut(s) | 38, 419, 701, 704, 779, 1034, 1199 |
| Tsp45I | GTSAC | 3 cut(s) | 65, 328, 1375 |
| TspDTI | ATGAA | 4 cut(s) | 351, 840, 1182, 1312 |
| TspGWI | ACGGA | 3 cut(s) | 148, 1218, 1398 |
| TspRI | CASTG | 1 cut(s) | 201 |
| Vha464I | CTTAAG | 1 cut(s) | 70 |
| VpaK11BI | GGWCC | 1 cut(s) | 188 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 196 |
| XceI | RCATGY | 3 cut(s) | 747, 1146, 1463 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 723 |
| XmiI | GTMKAC | 1 cut(s) | 321 |
| XmnI | GAANNNNTTC | 1 cut(s) | 572 |
| XspI | CTAG | 3 cut(s) | 99, 425, 1094 |
| Zsp2I | ATGCAT | 1 cut(s) | 745 |