Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0009262

Physical Location & Seq

Genomic Coordinates Reverse (-)

1381293 .. 1385530

Gene Structure 4238 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00157610.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1386 bp

ATGGCGCGTACGAGAATTGCAGCGACCCCGCCGTCGACGGCGGCCGAGAAATCAGAAAACCGGCGCCGTTTAAGCATGGAGAGGTCGGCGCTGTTCGCTAGGAGAGAGGCGGCGAAGGTTTTGAAGCTGGTTCTCCAAGGCGACTCCCGCCGCCGGTCCGTCGGCTCCATCAAGTCGCTCGTTTACAGTCCCTCGGTGAGAAACAAGAAGGGAACTTTCGCTCTGGTCTGCGAAACCCTAAAGCATCTTAAGATAATCAAGCAGGTGTTGAATGCTGCAGACGTTCTGAATAGCAAGTGGAGGGTGACTTCGTCAACTGGTGATGCGGAGAGATTTCTATTGCTTCGGAAAAAGGCTCTGCAGGCAGCTCTAGATCGCCTTTTAGTGAAGAAAAAAGTGAAGAGCGTTGAAGAATTGATAGCTCTTGATCAAACTCCTGAGATTTCAACACCTCGGTATGTTCGTGTTAATACTCTGAAAATTGATGTCAATATGGCCCTGCTTGAATTACAGAAACAATACAAGGTTCAAAAGGATGATCTGGTTCCTGACTTGTTGATTCTTCCACCTGGTAGTGACTTGCATGACCATCCTCTAATAGTCAATGGAAGTGTCTTCATGCAAGTTCTTGATGCATGCTCAGCTCCAGGAAACAAAACCGTCCACCTAGCAGCTCTAATGGGAGGTGAAGGAAAAATCATAGCGTGTGAGCTGAATGAAGAGAGGGTTAAACGATTAAAAGAGACAATCAGACTCTCTGATATTAAGGTTCTGCACGGAGATTTCTTACAGTTGAACCCTGAGGATCCCGCATATTCCAAGGTCCACGCCATTCTTTTGGATCCTTCCTGCTCTGGATCTGGGACAGCTTCTGCAAGATTAGATCATTTGCTCCCTTCTTCTGCTCCTGGTCACACTGCTGACTTCACAGAAACAGAAAGACTGAACAAGCTTGCGGCTTTTCAGCAAAAAGCTCTGGCTCATGCTTTATCTTTTCCAGAAGTGGAAAGAATTGTTTACAGCACATGCTCTGTCAACCAAATTGAAAACGAACATGTTGTCAGTTCTGTTCTACCTCTTGCTGAATCTTATGGTTTTGAACTTGAAACTCCGTTTCCCAAATGGCAGCGCCGTGGTCTTCCAGTTTTCAAGGGTGCTGAACGACTGCTTCGAACTGATCCCATTGAGGACAAAGAAGGCTTCTTCATTGCTTTGTTTGTCAGAAAAGGCTACTATCAATCAGAGGAACCTGATTCGACCAGCGAAAAAAACACCCACAGAAATCGACATGCCAGTAAGAGAATAGTTGTACCACCCACTACCAATTTGTTTAAAATCTGGGCGCATGCTCAGTTGAGCAGGCCAAATTGTAGTTGTTGTGGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Methyltr_RsmB-F

Protein Analysis

461

Amino Acids

51.4

Weight (kDa)

9.43

Isoelectric Point (pI)

43.86

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NSUN5_fdxn-like	PF21148	173 - 208	5.9e-06	NOL1/NOP2/Sun domain family member 5, ferredoxin-like domain
Methyltr_RsmB-F	PF01189	208 - 406	2.1e-22	16S rRNA methyltransferase RsmB/F

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009262)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G26180 AT5G26180 AT5G26180 AT5G26180 AT5G26180
fragaria_vesca	FvH4_2g31380 FvH4_2g31380
malus_domestica	MD15G1053900.v1.1
prunus_persica	Prupe.1G407400_v2.0.a1
pyrus_communis	pycom15g05080
rosa_chinensis	RchiOBHm_Chr6g0311441
rosa_laevigata	RLG00000010406
rosa_multiflora	Rmu_sc0006915.1_g000009 Rmu_sc0013619.1_g000002 Rmu_sc0015790.1_g000002
rosa_roxburghii	Rroxscaffold_7G00157610
rosa_rugosa	Rorug06G0389100
rosa_samantha	Rh6AG503400 Rh6BG514000 Rh6CG519800 Rh6DG506000
rosa_wichuraiana	Rw6G043840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	253
AasI	GACNNNNNNGTC	1 cut(s)	31
Acc36I	ACCTGC	1 cut(s)	253
AccB1I	GGYRCC	1 cut(s)	63
AccI	GTMKAC	1 cut(s)	35
AccII	CGCG	1 cut(s)	7
AciI	CCGC	8 cut(s)	29, 41, 110, 148, 151, 326, 810, 956
AclWI	GGATC	6 cut(s)	800, 813, 836, 849, 865, 1172
AcoI	YGGCCR	1 cut(s)	42
AcyI	GRCGYC	1 cut(s)	64
AfaI	GTAC	2 cut(s)	10, 1311
AfiI	CCNNNNNNNGG	1 cut(s)	153
AflII	CTTAAG	1 cut(s)	248
AflIII	ACRYGT	1 cut(s)	1054
AjnI	CCWGG	3 cut(s)	568, 646, 907
AluBI	AGCT	9 cut(s)	127, 368, 422, 644, 674, 712, 869, 952, 974
AluI	AGCT	9 cut(s)	127, 368, 422, 644, 674, 712, 869, 952, 974
Alw26I	GTCTC	1 cut(s)	737
AlwI	GGATC	6 cut(s)	800, 813, 836, 849, 865, 1172
AlwNI	CAGNNNCTG	1 cut(s)	872
AoxI	GGCC	3 cut(s)	42, 495, 1361
ApeKI	GCWGC	5 cut(s)	20, 275, 365, 671, 1126
ArsI	GACNNNNNNTTYG	2 cut(s)	1044, 1076
AspLEI	GCGC	5 cut(s)	7, 66, 91, 1131, 1345
AspS9I	GGNCC	3 cut(s)	156, 496, 823
AsuHPI	GGTGA	4 cut(s)	208, 316, 332, 698
AsuII	TTCGAA	1 cut(s)	1171
AvaII	GGWCC	2 cut(s)	156, 823
AxyI	CCTNAGG	1 cut(s)	801
BamHI	GGATCC	2 cut(s)	805, 841
BanI	GGYRCC	1 cut(s)	63
BbsI	GAAGAC	2 cut(s)	607, 1130
BbvI	GCAGC	5 cut(s)	32, 262, 377, 683, 1138
BccI	CCATC	2 cut(s)	176, 597
BceAI	ACGGC	4 cut(s)	16, 51, 54, 1116
BciT130I	CCWGG	3 cut(s)	570, 648, 909
BclI	TGATCA	1 cut(s)	427
BcoDI	GTCTC	1 cut(s)	737
BfaI	CTAG	3 cut(s)	99, 371, 668
BfmI	CTRYAG	2 cut(s)	276, 359
BfoI	RGCGCY	3 cut(s)	67, 92, 1132
BfrI	CTTAAG	1 cut(s)	248
BfuAI	ACCTGC	1 cut(s)	253
BisI	GCNGC	9 cut(s)	21, 42, 111, 151, 276, 366, 672, 957, 1127
BlpI	GCTNAGC	1 cut(s)	640
BlsI	GCNGC	9 cut(s)	22, 43, 112, 152, 277, 367, 673, 958, 1128
Bme1390I	CCNGG	3 cut(s)	570, 648, 909
Bme18I	GGWCC	2 cut(s)	156, 823
BmgT120I	GGNCC	3 cut(s)	156, 496, 823
BmiI	GGNNCC	6 cut(s)	65, 166, 546, 807, 843, 1248
BmrFI	CCNGG	3 cut(s)	570, 648, 909
BmsI	GCATC	3 cut(s)	253, 313, 622
BpiI	GAAGAC	2 cut(s)	607, 1130
BpmI	CTGGAG	1 cut(s)	630
Bpu1102I	GCTNAGC	1 cut(s)	640
Bpu14I	TTCGAA	1 cut(s)	1171
BsaHI	GRCGYC	1 cut(s)	64
BsaJI	CCNNGG	5 cut(s)	136, 192, 452, 819, 1132
Bsc4I	CCNNNNNNNGG	1 cut(s)	153
Bse118I	RCCGGY	2 cut(s)	60, 153
Bse1I	ACTGG	3 cut(s)	322, 1142, 1293
Bse21I	CCTNAGG	1 cut(s)	801
Bse3DI	GCAATG	1 cut(s)	1206
BseBI	CCWGG	3 cut(s)	570, 648, 909
BseDI	CCNNGG	5 cut(s)	136, 192, 452, 819, 1132
BseGI	GGATG	2 cut(s)	541, 589
BseLI	CCNNNNNNNGG	1 cut(s)	153
BseMI	GCAATG	1 cut(s)	1206
BseMII	CTCAG	4 cut(s)	429, 654, 792, 1364
BseNI	ACTGG	3 cut(s)	322, 1142, 1293
BseX3I	CGGCCG	1 cut(s)	42
BseXI	GCAGC	5 cut(s)	32, 262, 377, 683, 1138
BsgI	GTGCAG	1 cut(s)	758
Bsh1236I	CGCG	1 cut(s)	7
Bsh1285I	CGRYCG	1 cut(s)	45
BshFI	GGCC	3 cut(s)	44, 497, 1363
BshNI	GGYRCC	1 cut(s)	63
BsiEI	CGRYCG	1 cut(s)	45
BsiSI	CCGG	2 cut(s)	61, 154
BsiWI	CGTACG	1 cut(s)	8
BslFI	GGGAC	2 cut(s)	174, 877
BslI	CCNNNNNNNGG	1 cut(s)	153
BsmAI	GTCTC	1 cut(s)	737
BsmFI	GGGAC	2 cut(s)	174, 877
BsmI	GAATGC	1 cut(s)	277
BsnI	GGCC	3 cut(s)	44, 497, 1363
Bsp119I	TTCGAA	1 cut(s)	1171
Bsp143I	GATC	8 cut(s)	373, 427, 538, 805, 841, 857, 883, 1177
Bsp1720I	GCTNAGC	1 cut(s)	640
BspACI	CCGC	8 cut(s)	29, 41, 110, 148, 151, 326, 810, 956
BspANI	GGCC	3 cut(s)	44, 497, 1363
BspCNI	CTCAG	4 cut(s)	430, 653, 793, 1363
BspFNI	CGCG	1 cut(s)	7
BspLI	GGNNCC	6 cut(s)	65, 166, 546, 807, 843, 1248
BspMAI	CTGCAG	2 cut(s)	280, 363
BspMI	ACCTGC	1 cut(s)	253
BspPI	GGATC	6 cut(s)	800, 813, 836, 849, 865, 1172
BspQI	GCTCTTC	1 cut(s)	395
BspT104I	TTCGAA	1 cut(s)	1171
BspT107I	GGYRCC	1 cut(s)	63
BspTI	CTTAAG	1 cut(s)	248
BsrDI	GCAATG	1 cut(s)	1206
BsrFI	RCCGGY	2 cut(s)	60, 153
BsrI	ACTGG	3 cut(s)	322, 1142, 1293
BssAI	RCCGGY	2 cut(s)	60, 153
BssECI	CCNNGG	5 cut(s)	136, 192, 452, 819, 1132
BssMI	GATC	8 cut(s)	373, 427, 538, 805, 841, 857, 883, 1177
BssNI	GRCGYC	1 cut(s)	64
BssT1I	CCWWGG	2 cut(s)	136, 819
Bst2UI	CCWGG	3 cut(s)	570, 648, 909
Bst4CI	ACNGT	3 cut(s)	188, 661, 792
Bst6I	CTCTTC	2 cut(s)	395, 714
BstACI	GRCGYC	1 cut(s)	64
BstAFI	CTTAAG	1 cut(s)	248
BstBI	TTCGAA	1 cut(s)	1171
BstC8I	GCNNGC	5 cut(s)	363, 637, 954, 1347, 1361
BstDEI	CTNAG	4 cut(s)	438, 640, 801, 1350
BstDSI	CCRYGG	1 cut(s)	1132
BstF5I	GGATG	2 cut(s)	541, 589
BstFNI	CGCG	1 cut(s)	7
BstH2I	RGCGCY	3 cut(s)	67, 92, 1132
BstHHI	GCGC	5 cut(s)	7, 66, 91, 1131, 1345
BstKTI	GATC	8 cut(s)	376, 430, 541, 808, 844, 860, 886, 1180
BstMAI	GTCTC	1 cut(s)	737
BstMBI	GATC	8 cut(s)	373, 427, 538, 805, 841, 857, 883, 1177
BstMCI	CGRYCG	1 cut(s)	45
BstMWI	GCNNNNNNNGC	5 cut(s)	72, 95, 147, 362, 641
BstNI	CCWGG	3 cut(s)	570, 648, 909
BstNSI	RCATGY	5 cut(s)	639, 1029, 1058, 1292, 1349
BstSCI	CCNGG	3 cut(s)	568, 646, 907
BstSFI	CTRYAG	2 cut(s)	276, 359
BstUI	CGCG	1 cut(s)	7
BstV1I	GCAGC	5 cut(s)	32, 262, 377, 683, 1138
BstV2I	GAAGAC	2 cut(s)	607, 1130
BstX2I	RGATCY	3 cut(s)	805, 841, 857
BstXI	CCANNNNNNTGG	1 cut(s)	838
BstYI	RGATCY	3 cut(s)	805, 841, 857
BstZI	CGGCCG	1 cut(s)	42
Bsu36I	CCTNAGG	1 cut(s)	801
BsuRI	GGCC	3 cut(s)	44, 497, 1363
BtgI	CCRYGG	1 cut(s)	1132
BtsCI	GGATG	2 cut(s)	541, 589
BtsI	GCAGTG	1 cut(s)	915
BtsIMutI	CAGTG	1 cut(s)	915
BveI	ACCTGC	1 cut(s)	253
Cac8I	GCNNGC	5 cut(s)	363, 637, 954, 1347, 1361
CaiI	CAGNNNCTG	1 cut(s)	872
CfoI	GCGC	5 cut(s)	7, 66, 91, 1131, 1345
Cfr10I	RCCGGY	2 cut(s)	60, 153
Cfr13I	GGNCC	3 cut(s)	156, 496, 823
CpoI	CGGWCCG	1 cut(s)	156
CsiI	ACCWGGT	1 cut(s)	568
Csp6I	GTAC	2 cut(s)	9, 1310
CspI	CGGWCCG	1 cut(s)	156
CviAII	CATG	9 cut(s)	76, 584, 619, 636, 983, 1026, 1055, 1289, 1346
CviQI	GTAC	2 cut(s)	9, 1310
DdeI	CTNAG	4 cut(s)	438, 640, 801, 1350
DinI	GGCGCC	1 cut(s)	65
DpnI	GATC	8 cut(s)	375, 429, 540, 807, 843, 859, 885, 1179
DpnII	GATC	8 cut(s)	373, 427, 538, 805, 841, 857, 883, 1177
DraI	TTTAAA	1 cut(s)	1333
DrdI	GACNNNNNNGTC	1 cut(s)	31
DseDI	GACNNNNNNGTC	1 cut(s)	31
EaeI	YGGCCR	1 cut(s)	42
EagI	CGGCCG	1 cut(s)	42
Eam1104I	CTCTTC	2 cut(s)	395, 714
EarI	CTCTTC	2 cut(s)	395, 714
EclXI	CGGCCG	1 cut(s)	42
Eco130I	CCWWGG	2 cut(s)	136, 819
Eco47I	GGWCC	2 cut(s)	156, 823
Eco52I	CGGCCG	1 cut(s)	42
Eco81I	CCTNAGG	1 cut(s)	801
EcoRII	CCWGG	3 cut(s)	568, 646, 907
EcoT14I	CCWWGG	2 cut(s)	136, 819
EcoT22I	ATGCAT	1 cut(s)	637
EgeI	GGCGCC	1 cut(s)	65
EheI	GGCGCC	1 cut(s)	65
ErhI	CCWWGG	2 cut(s)	136, 819
FaeI	CATG	9 cut(s)	79, 587, 622, 639, 986, 1029, 1058, 1292, 1349
FaqI	GGGAC	2 cut(s)	174, 877
FatI	CATG	9 cut(s)	75, 583, 618, 635, 982, 1025, 1054, 1288, 1345
FauI	CCCGC	3 cut(s)	36, 155, 817
FbaI	TGATCA	1 cut(s)	427
FblI	GTMKAC	1 cut(s)	35
Fnu4HI	GCNGC	9 cut(s)	21, 42, 111, 151, 276, 366, 672, 957, 1127
FokI	GGATG	2 cut(s)	548, 576
Fsp4HI	GCNGC	9 cut(s)	21, 42, 111, 151, 276, 366, 672, 957, 1127
FspBI	CTAG	3 cut(s)	99, 371, 668
GlaI	GCGC	5 cut(s)	6, 65, 90, 1130, 1344
GluI	GCNGC	9 cut(s)	21, 42, 111, 151, 276, 366, 672, 957, 1127
GsuI	CTGGAG	1 cut(s)	630
HaeII	RGCGCY	3 cut(s)	67, 92, 1132
HaeIII	GGCC	3 cut(s)	44, 497, 1363
HapII	CCGG	2 cut(s)	61, 154
HhaI	GCGC	5 cut(s)	7, 66, 91, 1131, 1345
Hin1I	GRCGYC	1 cut(s)	64
Hin1II	CATG	9 cut(s)	79, 587, 622, 639, 986, 1029, 1058, 1292, 1349
Hin6I	GCGC	5 cut(s)	5, 64, 89, 1129, 1343
HinP1I	GCGC	5 cut(s)	5, 64, 89, 1129, 1343
HincII	GTYRAC	3 cut(s)	36, 315, 1036
HindII	GTYRAC	3 cut(s)	36, 315, 1036
HindIII	AAGCTT	1 cut(s)	950
HinfI	GANTC	5 cut(s)	143, 559, 753, 1085, 1253
HpaII	CCGG	2 cut(s)	61, 154
HphI	GGTGA	4 cut(s)	208, 316, 332, 698
Hpy166II	GTNNAC	7 cut(s)	36, 184, 315, 664, 826, 1018, 1036
Hpy188I	TCNGA	8 cut(s)	55, 288, 348, 477, 752, 760, 1223, 1243
Hpy188III	TCNNGA	7 cut(s)	371, 425, 437, 548, 629, 855, 998
Hpy8I	GTNNAC	7 cut(s)	36, 184, 315, 664, 826, 1018, 1036
Hpy99I	CGWCG	3 cut(s)	37, 40, 164
HpyAV	CCTTC	6 cut(s)	109, 202, 683, 855, 906, 1190
HpyCH4III	ACNGT	3 cut(s)	188, 661, 792
HpyCH4IV	ACGT	1 cut(s)	282
HpyCH4V	TGCA	8 cut(s)	20, 278, 361, 583, 622, 635, 775, 875
HpyF10VI	GCNNNNNNNGC	5 cut(s)	72, 95, 147, 362, 641
HpyF3I	CTNAG	4 cut(s)	438, 640, 801, 1350
HpySE526I	ACGT	1 cut(s)	282
Hsp92I	GRCGYC	1 cut(s)	64
Hsp92II	CATG	9 cut(s)	79, 587, 622, 639, 986, 1029, 1058, 1292, 1349
HspAI	GCGC	5 cut(s)	5, 64, 89, 1129, 1343
KasI	GGCGCC	1 cut(s)	63
Ksp22I	TGATCA	1 cut(s)	427
Kzo9I	GATC	8 cut(s)	373, 427, 538, 805, 841, 857, 883, 1177
LguI	GCTCTTC	1 cut(s)	395
LmnI	GCTCC	4 cut(s)	170, 649, 897, 910
Lsp1109I	GCAGC	5 cut(s)	32, 262, 377, 683, 1138
LweI	GCATC	3 cut(s)	253, 313, 622
MabI	ACCWGGT	1 cut(s)	568
MaeI	CTAG	3 cut(s)	99, 371, 668
MaeII	ACGT	1 cut(s)	282
MaeIII	GTNAC	3 cut(s)	304, 575, 911
MalI	GATC	8 cut(s)	375, 429, 540, 807, 843, 859, 885, 1179
MboI	GATC	8 cut(s)	373, 427, 538, 805, 841, 857, 883, 1177
MboII	GAAGA	9 cut(s)	400, 412, 422, 554, 607, 731, 891, 1130, 1195
MflI	RGATCY	3 cut(s)	805, 841, 857
MluCI	AATT	8 cut(s)	15, 413, 480, 506, 1011, 1041, 1324, 1366
Mly113I	GGCGCC	1 cut(s)	64
MlyI	GAGTC	2 cut(s)	137, 747
Mph1103I	ATGCAT	1 cut(s)	637
MseI	TTAA	7 cut(s)	71, 249, 468, 729, 737, 765, 1332
MspCI	CTTAAG	1 cut(s)	248
MspI	CCGG	2 cut(s)	61, 154
MspR9I	CCNGG	3 cut(s)	570, 648, 909
Mva1269I	GAATGC	1 cut(s)	277
MvaI	CCWGG	3 cut(s)	570, 648, 909
MvnI	CGCG	1 cut(s)	7
MwoI	GCNNNNNNNGC	5 cut(s)	72, 95, 147, 362, 641
NarI	GGCGCC	1 cut(s)	64
NdeII	GATC	8 cut(s)	373, 427, 538, 805, 841, 857, 883, 1177
NlaIII	CATG	9 cut(s)	79, 587, 622, 639, 986, 1029, 1058, 1292, 1349
NlaIV	GGNNCC	6 cut(s)	65, 166, 546, 807, 843, 1248
NmeAIII	GCCGAG	1 cut(s)	70
NmuCI	GTSAC	3 cut(s)	304, 575, 911
NsiI	ATGCAT	1 cut(s)	637
NspI	RCATGY	5 cut(s)	639, 1029, 1058, 1292, 1349
NspV	TTCGAA	1 cut(s)	1171
PaeI	GCATGC	2 cut(s)	639, 1349
PaqCI	CACCTGC	1 cut(s)	253
PciI	ACATGT	1 cut(s)	1054
PciSI	GCTCTTC	1 cut(s)	395
PcsI	WCGNNNNNNNCGW	2 cut(s)	460, 1168
PctI	GAATGC	1 cut(s)	277
PfeI	GAWTC	3 cut(s)	559, 1085, 1253
Pfl23II	CGTACG	1 cut(s)	8
PflFI	GACNNNGTC	1 cut(s)	310
PfoI	TCCNGGA	1 cut(s)	646
PkrI	GCNGC	9 cut(s)	22, 43, 112, 152, 277, 367, 673, 958, 1128
PleI	GAGTC	2 cut(s)	137, 747
PluTI	GGCGCC	1 cut(s)	67
PpsI	GAGTC	2 cut(s)	137, 747
PscI	ACATGT	1 cut(s)	1054
Psp6I	CCWGG	3 cut(s)	568, 646, 907
PspGI	CCWGG	3 cut(s)	568, 646, 907
PspLI	CGTACG	1 cut(s)	8
PspN4I	GGNNCC	6 cut(s)	65, 166, 546, 807, 843, 1248
PspPI	GGNCC	3 cut(s)	156, 496, 823
PstI	CTGCAG	2 cut(s)	280, 363
PstNI	CAGNNNCTG	1 cut(s)	872
PsuI	RGATCY	3 cut(s)	805, 841, 857
PsyI	GACNNNGTC	1 cut(s)	310
RsaI	GTAC	2 cut(s)	10, 1311
RsaNI	GTAC	2 cut(s)	9, 1310
Rsr2I	CGGWCCG	1 cut(s)	156
RsrII	CGGWCCG	1 cut(s)	156
SalI	GTCGAC	1 cut(s)	34
SapI	GCTCTTC	1 cut(s)	395
SaqAI	TTAA	7 cut(s)	71, 249, 468, 729, 737, 765, 1332
SatI	GCNGC	9 cut(s)	21, 42, 111, 151, 276, 366, 672, 957, 1127
Sau3AI	GATC	8 cut(s)	373, 427, 538, 805, 841, 857, 883, 1177
Sau96I	GGNCC	3 cut(s)	156, 496, 823
SchI	GAGTC	2 cut(s)	137, 747
ScrFI	CCNGG	3 cut(s)	570, 648, 909
SexAI	ACCWGGT	1 cut(s)	568
SfaNI	GCATC	3 cut(s)	253, 313, 622
SfcI	CTRYAG	2 cut(s)	276, 359
SfoI	GGCGCC	1 cut(s)	65
SfuI	TTCGAA	1 cut(s)	1171
SgrDI	CGTCGACG	1 cut(s)	34
SinI	GGWCC	2 cut(s)	156, 823
SmlI	CTYRAG	1 cut(s)	248
SmoI	CTYRAG	1 cut(s)	248
SphI	GCATGC	2 cut(s)	639, 1349
Sse9I	AATT	8 cut(s)	15, 413, 480, 506, 1011, 1041, 1324, 1366
SsiI	CCGC	8 cut(s)	29, 41, 110, 148, 151, 326, 810, 956
SspDI	GGCGCC	1 cut(s)	63
SspMI	CTAG	3 cut(s)	99, 371, 668
StyD4I	CCNGG	3 cut(s)	568, 646, 907
StyI	CCWWGG	2 cut(s)	136, 819
TaaI	ACNGT	3 cut(s)	188, 661, 792
TaiI	ACGT	1 cut(s)	285
TaqI	TCGA	4 cut(s)	35, 1171, 1256, 1285
TasI	AATT	8 cut(s)	15, 413, 480, 506, 1011, 1041, 1324, 1366
TauI	GCSGC	4 cut(s)	44, 113, 153, 959
TfiI	GAWTC	3 cut(s)	559, 1085, 1253
Tru1I	TTAA	7 cut(s)	71, 249, 468, 729, 737, 765, 1332
Tru9I	TTAA	7 cut(s)	71, 249, 468, 729, 737, 765, 1332
TscAI	CASTG	1 cut(s)	922
TseFI	GTSAC	3 cut(s)	304, 575, 911
TseI	GCWGC	5 cut(s)	20, 275, 365, 671, 1126
Tsp45I	GTSAC	3 cut(s)	304, 575, 911
TspDTI	ATGAA	3 cut(s)	607, 732, 1195
TspGWI	ACGGA	3 cut(s)	148, 792, 1101
TspRI	CASTG	1 cut(s)	922
Tth111I	GACNNNGTC	1 cut(s)	310
Vha464I	CTTAAG	1 cut(s)	248
VpaK11BI	GGWCC	2 cut(s)	156, 823
XbaI	TCTAGA	1 cut(s)	370
XceI	RCATGY	5 cut(s)	639, 1029, 1058, 1292, 1349
XmiI	GTMKAC	1 cut(s)	35
XspI	CTAG	3 cut(s)	99, 371, 668
Zsp2I	ATGCAT	1 cut(s)	637

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.