Prupe.1G409700_v2.0.a1

Short calmodulin-binding motif containing conserved Ile and Gln residues.

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0005228
Physical Location & Seq
Forward (+)
35832705 .. 35835708
3004 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G409700.2

Sequence Viewer

Length: 1035 bp
ATGGGTACAAATCGTGAAACACTGTCGAAAAAGACACCCGCTGTTTCGCTTCCTGAACCAACCCCATTGTTTTCTCCAAGACCGGTTAGTGAGCTCGAAGCTGCAGCAACTGAACTTCAGAGAGTGTATAAGGGTTACAGGACTAGGCGTAACCTTGCAGATTGTGCTGTTGTGGTTGAGGAACTATGGGAGAAGGCCATAGTCTTTGCAGCTCTGGAACGAAGCTCAGTGTCCTTCTTCAACATTGAGGAACATGAAACTGCTGTGTCACGGTGGGAACGGGCTAGGACAAGGGCTGCCAAGTTAGGGAAGGGTTGGTGCAAGGATGAGAAGGCTCAGATGCTAGCTTCACAGTACCTTCTTGAAGCTATTGATCCACGCCATCGGTTCGGACTCAATTTGCAACTCTATTATGATGTCTGGTCTGAATGCACGACTATCCAACCTTTCTTCTACTGGTTGGATGTTGGTGATGGTAAAGACGTAAACCTCAAGGATTGCCCAAGAAGTGTTCTAAACCTTCAGTGCATCAAATATCTTGGACCAAAAGAGAGGGAGTCATATCAAGTGATTGTGGAGAATGGAAAGCTTGTGCACAGGCAAACTGGGAAGCTTGTTCACACAGTTGAACTTGGGTCTAAGTGGATTTTTGTGCTAAGCGCATCAAGGGCTTTGTATGTTGGGCAGGAAATAAAAGGTGTTTTCCAGCACTCAAGTTTTCTATCTGGAGGGGCTGCAAGTGCAGCTGGAAGATTGGTTGCCTACAATGGGGTTCTTGAGGCCATATGGCCATCCAATGGTCACTATCTCCCAACCATACACAATTTCAAGAAACTCATTAGCTTCTTGGAGGAGCAACAAGTAGACCTCACCAATGTCAAGCAGATGTGTCCAATAGATGATGACAAAGAATCATTCATTAATCCAACTGATCATCAACATGAGAGTATGGGGTCCACATCCAATGCAACCAATAGAGAAGCCCCTGTATATGACTTGTCCAAGCGTTTGTCTTGCAAGTGGTCCACGTATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
IQ

Protein Analysis

345

Amino Acids

39.0

Weight (kDa)

7.61

Isoelectric Point (pI)

41.39

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 797
AccI GTMKAC 1 cut(s) 864
AciI CCGC 1 cut(s) 39
AclWI GGATC 1 cut(s) 368
AcoI YGGCCR 1 cut(s) 788
AcuI CTGAAG 2 cut(s) 101, 506
AfaI GTAC 2 cut(s) 7, 356
AfiI CCNNNNNNNGG 3 cut(s) 306, 768, 797
AgeI ACCGGT 1 cut(s) 82
AgsI TTSAA 4 cut(s) 241, 365, 629, 829
Alw21I GWGCWC 2 cut(s) 96, 597
Alw44I GTGCAC 1 cut(s) 593
AlwI GGATC 1 cut(s) 368
AlwNI CAGNNNCTG 1 cut(s) 110
AoxI GGCC 3 cut(s) 195, 780, 788
ApaLI GTGCAC 1 cut(s) 593
ApeKI GCWGC 6 cut(s) 101, 104, 209, 296, 734, 743
AseI ATTAAT 1 cut(s) 921
AsiGI ACCGGT 1 cut(s) 82
AspLEI GCGC 1 cut(s) 662
AspS9I GGNCC 3 cut(s) 542, 954, 1023
AsuHPI GGTGA 2 cut(s) 482, 862
AsuNHI GCTAGC 1 cut(s) 343
AvaII GGWCC 3 cut(s) 542, 954, 1023
BaeGI GKGCMC 1 cut(s) 597
BalI TGGCCA 1 cut(s) 790
BanII GRGCYC 1 cut(s) 96
Bbv12I GWGCWC 2 cut(s) 96, 597
BbvI GCAGC 6 cut(s) 88, 116, 221, 283, 721, 755
BccI CCATC 3 cut(s) 390, 467, 799
BclI TGATCA 1 cut(s) 931
BfaI CTAG 3 cut(s) 144, 285, 344
BfmI CTRYAG 1 cut(s) 102
BisI GCNGC 6 cut(s) 102, 105, 210, 297, 735, 744
BlpI GCTNAGC 1 cut(s) 656
BlsI GCNGC 6 cut(s) 103, 106, 211, 298, 736, 745
Bme18I GGWCC 3 cut(s) 542, 954, 1023
BmgT120I GGNCC 3 cut(s) 542, 954, 1023
BmiI GGNNCC 1 cut(s) 955
BmrI ACTGGG 1 cut(s) 615
BmsI GCATC 3 cut(s) 330, 537, 671
BmtI GCTAGC 1 cut(s) 347
BmuI ACTGGG 1 cut(s) 615
BpmI CTGGAG 1 cut(s) 747
Bpu1102I GCTNAGC 1 cut(s) 656
BpuEI CTTGAG 3 cut(s) 476, 697, 797
BsaAI YACGTR 1 cut(s) 1029
BsaWI WCCGGW 1 cut(s) 82
Bsc4I CCNNNNNNNGG 3 cut(s) 306, 768, 797
Bse118I RCCGGY 1 cut(s) 82
Bse1I ACTGG 2 cut(s) 461, 610
BseGI GGATG 4 cut(s) 331, 469, 791, 959
BseLI CCNNNNNNNGG 3 cut(s) 306, 768, 797
BseMII CTCAG 2 cut(s) 240, 350
BseNI ACTGG 2 cut(s) 461, 610
BseRI GAGGAG 1 cut(s) 866
BseSI GKGCMC 1 cut(s) 597
BseXI GCAGC 6 cut(s) 88, 116, 221, 283, 721, 755
BsgI GTGCAG 1 cut(s) 762
BshFI GGCC 3 cut(s) 197, 782, 790
BshTI ACCGGT 1 cut(s) 82
BsiHKAI GWGCWC 2 cut(s) 96, 597
BsiSI CCGG 1 cut(s) 83
BslI CCNNNNNNNGG 3 cut(s) 306, 768, 797
BsmI GAATGC 1 cut(s) 434
BsnI GGCC 3 cut(s) 197, 782, 790
Bsp1286I GDGCHC 2 cut(s) 96, 597
Bsp143I GATC 2 cut(s) 373, 931
Bsp1720I GCTNAGC 1 cut(s) 656
BspACI CCGC 1 cut(s) 39
BspANI GGCC 3 cut(s) 197, 782, 790
BspCNI CTCAG 2 cut(s) 239, 349
BspLI GGNNCC 1 cut(s) 955
BspMAI CTGCAG 1 cut(s) 106
BspOI GCTAGC 1 cut(s) 347
BspPI GGATC 1 cut(s) 368
BsrFI RCCGGY 1 cut(s) 82
BsrI ACTGG 2 cut(s) 461, 610
BssAI RCCGGY 1 cut(s) 82
BssMI GATC 2 cut(s) 373, 931
Bst4CI ACNGT 4 cut(s) 24, 273, 354, 625
BstAPI GCANNNNNTGC 1 cut(s) 164
BstBAI YACGTR 1 cut(s) 1029
BstC8I GCNNGC 1 cut(s) 345
BstDEI CTNAG 4 cut(s) 226, 336, 639, 656
BstF5I GGATG 4 cut(s) 331, 469, 791, 959
BstHHI GCGC 1 cut(s) 662
BstKTI GATC 2 cut(s) 376, 934
BstMBI GATC 2 cut(s) 373, 931
BstMWI GCNNNNNNNGC 4 cut(s) 164, 668, 740, 743
BstSFI CTRYAG 1 cut(s) 102
BstSLI GKGCMC 1 cut(s) 597
BstV1I GCAGC 6 cut(s) 88, 116, 221, 283, 721, 755
BsuRI GGCC 3 cut(s) 197, 782, 790
BtsCI GGATG 4 cut(s) 331, 469, 791, 959
BtsIMutI CAGTG 3 cut(s) 20, 234, 530
Cac8I GCNNGC 1 cut(s) 345
CaiI CAGNNNCTG 1 cut(s) 110
CfoI GCGC 1 cut(s) 662
Cfr10I RCCGGY 1 cut(s) 82
Cfr13I GGNCC 3 cut(s) 542, 954, 1023
Csp6I GTAC 2 cut(s) 6, 355
CspAI ACCGGT 1 cut(s) 82
CviAII CATG 2 cut(s) 254, 941
CviQI GTAC 2 cut(s) 6, 355
DdeI CTNAG 4 cut(s) 226, 336, 639, 656
DpnI GATC 2 cut(s) 375, 933
DpnII GATC 2 cut(s) 373, 931
EaeI YGGCCR 1 cut(s) 788
Ecl136II GAGCTC 1 cut(s) 94
Eco24I GRGCYC 1 cut(s) 96
Eco47I GGWCC 3 cut(s) 542, 954, 1023
Eco53kI GAGCTC 1 cut(s) 94
Eco57I CTGAAG 2 cut(s) 101, 506
EcoICRI GAGCTC 1 cut(s) 94
EcoT38I GRGCYC 1 cut(s) 96
FaeI CATG 2 cut(s) 257, 944
FatI CATG 2 cut(s) 253, 940
FauI CCCGC 1 cut(s) 46
FauNDI CATATG 1 cut(s) 785
FbaI TGATCA 1 cut(s) 931
FblI GTMKAC 1 cut(s) 864
Fnu4HI GCNGC 6 cut(s) 102, 105, 210, 297, 735, 744
FokI GGATG 4 cut(s) 338, 476, 778, 946
FriOI GRGCYC 1 cut(s) 96
Fsp4HI GCNGC 6 cut(s) 102, 105, 210, 297, 735, 744
FspBI CTAG 3 cut(s) 144, 285, 344
GlaI GCGC 1 cut(s) 661
GluI GCNGC 6 cut(s) 102, 105, 210, 297, 735, 744
GsuI CTGGAG 1 cut(s) 747
HaeIII GGCC 3 cut(s) 197, 782, 790
HapII CCGG 1 cut(s) 83
HhaI GCGC 1 cut(s) 662
Hin1II CATG 2 cut(s) 257, 944
Hin6I GCGC 1 cut(s) 660
HinP1I GCGC 1 cut(s) 660
HindIII AAGCTT 2 cut(s) 587, 611
HinfI GANTC 3 cut(s) 393, 557, 911
HpaII CCGG 1 cut(s) 83
HphI GGTGA 2 cut(s) 482, 862
Hpy166II GTNNAC 6 cut(s) 487, 595, 619, 865, 957, 1026
Hpy188I TCNGA 4 cut(s) 120, 339, 392, 427
Hpy188III TCNNGA 7 cut(s) 14, 53, 215, 362, 726, 776, 829
Hpy8I GTNNAC 6 cut(s) 487, 595, 619, 865, 957, 1026
HpyAV CCTTC 6 cut(s) 187, 244, 304, 325, 368, 530
HpyCH4III ACNGT 4 cut(s) 24, 273, 354, 625
HpyCH4IV ACGT 2 cut(s) 483, 1028
HpyF10VI GCNNNNNNNGC 4 cut(s) 164, 668, 740, 743
HpyF3I CTNAG 4 cut(s) 226, 336, 639, 656
HpySE526I ACGT 2 cut(s) 483, 1028
Hsp92II CATG 2 cut(s) 257, 944
HspAI GCGC 1 cut(s) 660
Ksp22I TGATCA 1 cut(s) 931
Kzo9I GATC 2 cut(s) 373, 931
LmnI GCTCC 1 cut(s) 853
Lsp1109I GCAGC 6 cut(s) 88, 116, 221, 283, 721, 755
LweI GCATC 3 cut(s) 330, 537, 671
MaeI CTAG 3 cut(s) 144, 285, 344
MaeII ACGT 2 cut(s) 483, 1028
MaeIII GTNAC 4 cut(s) 134, 149, 267, 800
MalI GATC 2 cut(s) 375, 933
MboI GATC 2 cut(s) 373, 931
MboII GAAGA 3 cut(s) 229, 442, 762
MhlI GDGCHC 2 cut(s) 96, 597
MlsI TGGCCA 1 cut(s) 790
MluCI AATT 2 cut(s) 397, 823
MluNI TGGCCA 1 cut(s) 790
MlyI GAGTC 2 cut(s) 387, 566
MmeI TCCRAC 3 cut(s) 441, 466, 950
MnlI CCTC 8 cut(s) 172, 241, 500, 546, 722, 772, 844, 878
Mox20I TGGCCA 1 cut(s) 790
MscI TGGCCA 1 cut(s) 790
MseI TTAA 1 cut(s) 921
MslI CAYNNNNRTG 1 cut(s) 939
Msp20I TGGCCA 1 cut(s) 790
MspA1I CMGCKG 2 cut(s) 41, 746
MspI CCGG 1 cut(s) 83
Mva1269I GAATGC 1 cut(s) 434
MwoI GCNNNNNNNGC 4 cut(s) 164, 668, 740, 743
NdeI CATATG 1 cut(s) 785
NdeII GATC 2 cut(s) 373, 931
NheI GCTAGC 1 cut(s) 343
NlaIII CATG 2 cut(s) 257, 944
NlaIV GGNNCC 1 cut(s) 955
NmuCI GTSAC 2 cut(s) 267, 800
PctI GAATGC 1 cut(s) 434
PfeI GAWTC 1 cut(s) 911
PflMI CCANNNNNTGG 1 cut(s) 797
PinAI ACCGGT 1 cut(s) 82
PkrI GCNGC 6 cut(s) 103, 106, 211, 298, 736, 745
PleI GAGTC 2 cut(s) 387, 565
PpsI GAGTC 2 cut(s) 387, 565
Ppu21I YACGTR 1 cut(s) 1029
PshBI ATTAAT 1 cut(s) 921
Psp124BI GAGCTC 1 cut(s) 96
PspN4I GGNNCC 1 cut(s) 955
PspPI GGNCC 3 cut(s) 542, 954, 1023
PstI CTGCAG 1 cut(s) 106
PstNI CAGNNNCTG 1 cut(s) 110
PvuII CAGCTG 1 cut(s) 746
RsaI GTAC 2 cut(s) 7, 356
RsaNI GTAC 2 cut(s) 6, 355
RseI CAYNNNNRTG 1 cut(s) 939
SacI GAGCTC 1 cut(s) 96
SaqAI TTAA 1 cut(s) 921
SatI GCNGC 6 cut(s) 102, 105, 210, 297, 735, 744
Sau3AI GATC 2 cut(s) 373, 931
Sau96I GGNCC 3 cut(s) 542, 954, 1023
SchI GAGTC 2 cut(s) 387, 566
SduI GDGCHC 2 cut(s) 96, 597
SfaNI GCATC 3 cut(s) 330, 537, 671
SfcI CTRYAG 1 cut(s) 102
SinI GGWCC 3 cut(s) 542, 954, 1023
SmiMI CAYNNNNRTG 1 cut(s) 939
SmlI CTYRAG 3 cut(s) 491, 712, 776
SmoI CTYRAG 3 cut(s) 491, 712, 776
Sse9I AATT 2 cut(s) 397, 823
SsiI CCGC 1 cut(s) 39
SspMI CTAG 3 cut(s) 144, 285, 344
SstI GAGCTC 1 cut(s) 96
TaaI ACNGT 4 cut(s) 24, 273, 354, 625
TaiI ACGT 2 cut(s) 486, 1031
TaqI TCGA 2 cut(s) 26, 96
TasI AATT 2 cut(s) 397, 823
TfiI GAWTC 1 cut(s) 911
Tru1I TTAA 1 cut(s) 921
Tru9I TTAA 1 cut(s) 921
TscAI CASTG 3 cut(s) 27, 234, 530
TseFI GTSAC 2 cut(s) 267, 800
TseI GCWGC 6 cut(s) 101, 104, 209, 296, 734, 743
Tsp45I GTSAC 2 cut(s) 267, 800
TspDTI ATGAA 2 cut(s) 270, 907
TspRI CASTG 3 cut(s) 27, 234, 530
Van91I CCANNNNNTGG 1 cut(s) 797
VneI GTGCAC 1 cut(s) 593
VpaK11BI GGWCC 3 cut(s) 542, 954, 1023
VspI ATTAAT 1 cut(s) 921
XmiI GTMKAC 1 cut(s) 864
XspI CTAG 3 cut(s) 144, 285, 344
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.