Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0005228

Physical Location & Seq

Genomic Coordinates Forward (+)

1582210 .. 1588934

Gene Structure 6725 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000010429

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2601 bp

ATGGGTTCTTCTGTGCAAAGATCATCAACCTTGACCACAAATGTGGCAGAATTAGTTGATGCTTCAGCTAAGCGGCCGGAGGTCTCGTACATTGATACCATGCCTATTTATGTTAGGGAGCTGATTGCTGGAGGCGCAGCTGGGGCATTTGCTAAGACTGCTATTGCGCCGCTGGAACGGACCAAGATACTCTTGCAGACAAGAACAGAGTTTCGTTCTCTGGGGGTAGGTCAATCCTTGAACAAGGTGCTAAAACATGAAGGCTTTCTAGGATTCTACAAAGGAAATGGAGCTAGTGTTGTTCGAATTGTTCCATATGCAGCCTTACATTACATGGCATACGAGCGGTATAGGTGTTGGATCTTGAATAACTTTTCTGCTTTGGGATCAGGGCCTCATATTGATCTTTTAGCCGGTTCAGCAGCTGGAGGAACAGCAGTCTTATGCACTTACCCCTTGGACTTGGCTCGCACAAAACTTGCTTATCAGGTTGTTAACACCAGAGGAAAATTCACTTATGGTATGAAAGGTGTTCATAGTCAAATCTCTTATAAGGGCATTGGTGATGTGCTCTCTAGTGTCTACAAGGAAGGAGGTCTGCGGGGGCTTTATCGCGGCGTAGGCCCCACACTGACTGGAATCCTTCCTTATGCTGGTTTAAAGTTCTACATATATGAGAAACTTAAAAGCCATGTTCCTGAGGAGTATGAAAAGTCTATTGGGATGCGTCTTTCCTGCGGAGCTTTGGCTGGCTTAGTTGGGCAAACCTTCACATACCCATTGGATGTTGTTAGGAGGCAAATGCAGGTTGAGAATCTGCAGCCTTCATGTGGTGTTAGGTACAAAAACACAATGGACGGACTTAAATTTATTATCCGCAATCAAGGATGGCAAAAGCTGTTTGCAGGCCTGAGCATTAACTATATCAAGATTGTTCCTTCTGTTGCAATTGGTTTCACAGCATATGACGCGATGAAAGTTTGGCTCCACGAGGAGGAGGAAGAAAAAGAAGAAGAAGAAGAGGGGGCTTGCATTGCATTTGGGTTTGCTGAGCGAGTTCATCATTTGATCACTGCCAAACTAATGGGTCTGACCGGCACCATGGAAACACTCACCGTGAGGTCCATGAGCTTAAGTACTGAAGATTCAGAACCCCATAGCAAGTCTAACGGGTTAGACTGTAAGAAAAGTATGGAAAGGTCAATGGGCTTCAAGAAACGGGAGCCCACAGAAGAAAAACTCAAAACAGCATCTGATACATTTGATGAGAAATCACATTCAGATTCTTCAGTTGGTAGAAACTGTGAAAAAATGCAGATAAAGAAACCCACAATACTGCTTCCTGAACCAATCATGTTGTTTTCTCCAAAGCCGGCGGCTAGTGAGCGCGATGCTGCAGCAACAAGGCTTCAGAAAGTGTACAAGAGTTACAGGACTCGGCGCAACCTCGCAGATTGTGCTGTTGTGGTTGAGGAACTATGGTGGAAAGCCGTAGAGTTGGCAGCTCTGGAACGAAGCTCGGTGTCATTCTTCGACATTGAGAAACATGAAACTGCTGTGTCAAAGTGGACAAGAGCTAGGAAAAGGGCAGCTAAGTTAGGGAAGGGGTTGTGCAAGGATGAGAAGGCTCAGAAACTAATTGATCCACGCCATCGGTATGGACACAATTTGCAATTCTACTATGATGTGTGGACTGCTTGCAAGAGCCCTCAACCTTTCTTCTACTGGTTGGATGTTGGTGATGGTAAAGACACAAATGTCAAGAAGTGTCCAAGGCCTGATCTCCAACGCCAGTGCATCAAATATCTTGAACCAAGAGAGAGAGAAGCATATGAAGTGATTGTAGAGGAGGGAAAGCTAGTGCAAAAGCAATCAGGGTTCCTTGTTGACACAGACGAAGGGTCAAAGTGGATATTTGTGCTGAGCACTTCAAGGTCTTTATATGTAGGCCAGAAAAAGAAAGGTGCTTTTCAGCATTCAAGTTTCCTCTCTGGAGGAGCTACTACTGCAGCTGGAAGACTAGTTGCTCATAATGGGGTTCTTGAGGCTATATGGCCATACAGTGGTCACTATCTTCCAACCGCAGACAACTTCAAGGAATTCGTTAGCTTCCTGAAAGAGCACAATGTAGACCTCACCGATGTCAAGATGTATGCTGTTGATGAAGACAAAGCATATCAAAATGAGGAGTGCTCTAAGCCAGAGGTGACTGGTTCATCCACAACCAAAGTGACCTTTAGTAGTGGTGCTGCCATTGAAGTTCCAGCAGATCATCATCAACAACTTGAGAGTAATGGGAGCAGTTCAAGTAGTAATGCAGATGAAGCAGAAGAAGAGCAAGCACAAGCATTTGACATGTCAAAGCGTCTGGCTTGCAAGTGGAGCAGTGGCATTGGGCCACGTATTGGGTGTGTGAGGGACTATCCAGCTGACCTTCAATCCCTAGCTCTTGAGAAAGTCAATCTATCACCAAGAGTCACATTGGGCCGCCATGAAAGTTATGCCCCAATCCCTTCACCTAGACCAAGCCCAAAGATCAGGGTCTCACCTAGGCTTTCCTATATGGGCCTCCCCAGCCCAAGGGTACCCAATTCCACTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Protein Analysis

867

Amino Acids

96.29

Weight (kDa)

8.93

Isoelectric Point (pI)

47.52

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Mito_carr	PF00153	38 - 123	1.7e-19	Mitochondrial carrier protein
Mito_carr	PF00153	134 - 233	7e-21	Mitochondrial carrier protein
Mito_carr	PF00153	238 - 331	1.6e-20	Mitochondrial carrier protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005228)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G26190 AT2G26190 AT2G26190 AT4G33050 AT4G33050 AT4G33050 AT4G33050 AT4G33050 AT4G33050
fragaria_vesca	FvH4_2g31640 FvH4_2g31640 FvH4_2g31640 FvH4_2g31640
malus_domestica	MD08G1064600.v1.1 MD15G1057300.v1.1
prunus_persica	Prupe.1G409700_v2.0.a1 Prupe.1G409700_v2.0.a1 Prupe.1G409700_v2.0.a1 Prupe.1G409800_v2.0.a1
rosa_chinensis	RchiOBHm_Chr6g0311181
rosa_laevigata	RLG00000010429
rosa_multiflora	Rmu_co8419083.1_g000001
rosa_roxburghii	Rroxscaffold_7G00157930
rosa_rugosa	Rorug06G0386000 Rorug06G0386000
rosa_samantha	Rh6BG510900 Rh6CG516600 Rh6DG503100
rosa_wichuraiana	Rw6G043570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	552
AasI	GACNNNNNNGTC	1 cut(s)	1757
Acc36I	ACCTGC	1 cut(s)	796
Acc65I	GGTACC	1 cut(s)	2584
AccB1I	GGYRCC	2 cut(s)	1097, 2584
AccB7I	CCANNNNNTGG	2 cut(s)	2063, 2405
AccBSI	CCGCTC	1 cut(s)	346
AccI	GTMKAC	2 cut(s)	582, 2130
AccII	CGCG	3 cut(s)	615, 971, 1389
AclWI	GGATC	3 cut(s)	368, 394, 1637
AcoI	YGGCCR	2 cut(s)	74, 2054
AcsI	RAATTY	3 cut(s)	509, 866, 2099
AcuI	CTGAAG	4 cut(s)	48, 1161, 1272, 1394
AfaI	GTAC	5 cut(s)	89, 842, 1138, 1421, 2586
AfiI	CCNNNNNNNGG	6 cut(s)	653, 830, 994, 2063, 2405, 2580
AflII	CTTAAG	1 cut(s)	1132
AflIII	ACRYGT	1 cut(s)	2355
AhdI	GACNNNNNGTC	1 cut(s)	1900
AhlI	ACTAGT	1 cut(s)	2020
AjuI	GAANNNNNNNTTGG	2 cut(s)	702, 734
AleI	CACNNNNGTG	1 cut(s)	41
Alw21I	GWGCWC	4 cut(s)	573, 1928, 2124, 2195
Alw26I	GTCTC	2 cut(s)	88, 2548
AlwI	GGATC	3 cut(s)	368, 394, 1637
AlwNI	CAGNNNCTG	2 cut(s)	425, 1253
ApoI	RAATTY	3 cut(s)	509, 866, 2099
Asp700I	GAANNNNTTC	1 cut(s)	264
Asp718I	GGTACC	1 cut(s)	2584
AspA2I	CCTAGG	1 cut(s)	2549
AspLEI	GCGC	4 cut(s)	137, 169, 1389, 1443
AspS9I	GGNCC	7 cut(s)	180, 392, 623, 1122, 2396, 2485, 2566
AsuHPI	GGTGA	8 cut(s)	575, 1105, 1751, 2128, 2218, 2460, 2508, 2538
AsuII	TTCGAA	1 cut(s)	304
AvaII	GGWCC	2 cut(s)	180, 1122
AvrII	CCTAGG	1 cut(s)	2549
AxyI	CCTNAGG	1 cut(s)	699
BalI	TGGCCA	1 cut(s)	2056
BanI	GGYRCC	2 cut(s)	1097, 2584
BanII	GRGCYC	2 cut(s)	1227, 1709
BauI	CACGAG	1 cut(s)	989
BbsI	GAAGAC	2 cut(s)	2023, 2172
Bbv12I	GWGCWC	4 cut(s)	573, 1928, 2124, 2195
BccI	CCATC	3 cut(s)	882, 1659, 1736
BceAI	ACGGC	1 cut(s)	1475
BclI	TGATCA	1 cut(s)	1068
BcoDI	GTCTC	2 cut(s)	88, 2548
BcuI	ACTAGT	1 cut(s)	2020
BfmI	CTRYAG	3 cut(s)	818, 1395, 2007
BfrI	CTTAAG	1 cut(s)	1132
BfuAI	ACCTGC	1 cut(s)	796
BlnI	CCTAGG	1 cut(s)	2549
BlpI	GCTNAGC	3 cut(s)	69, 1050, 1922
BmcAI	AGTACT	1 cut(s)	1138
Bme18I	GGWCC	2 cut(s)	180, 1122
BmeRI	GACNNNNNGTC	1 cut(s)	1900
BmgT120I	GGNCC	7 cut(s)	180, 392, 623, 1122, 2396, 2485, 2566
BmiI	GGNNCC	6 cut(s)	625, 986, 1099, 1224, 1880, 2586
BmsI	GCATC	5 cut(s)	49, 714, 1259, 1381, 1806
BpiI	GAAGAC	2 cut(s)	2023, 2172
BplI	GAGNNNNNCTC	2 cut(s)	2177, 2209
BpmI	CTGGAG	3 cut(s)	150, 447, 2013
Bpu10I	CCTNAGC	1 cut(s)	911
Bpu1102I	GCTNAGC	3 cut(s)	69, 1050, 1922
Bpu14I	TTCGAA	1 cut(s)	304
BpuEI	CTTGAG	3 cut(s)	2063, 2306, 2471
BsaAI	YACGTR	1 cut(s)	2402
BsaBI	GATNNNNATC	1 cut(s)	2274
BsaI	GGTCTC	2 cut(s)	88, 2548
BsaJI	CCNNGG	5 cut(s)	456, 1101, 1772, 2549, 2579
BsaXI	ACNNNNNCTCC	4 cut(s)	71, 101, 282, 312
Bsc4I	CCNNNNNNNGG	6 cut(s)	653, 830, 994, 2063, 2405, 2580
Bse118I	RCCGGY	3 cut(s)	413, 1094, 1372
Bse1I	ACTGG	4 cut(s)	640, 1730, 1792, 2215
Bse21I	CCTNAGG	1 cut(s)	699
Bse3DI	GCAATG	1 cut(s)	1032
Bse8I	GATNNNNATC	1 cut(s)	2274
BseDI	CCNNGG	5 cut(s)	456, 1101, 1772, 2549, 2579
BseGI	GGATG	6 cut(s)	729, 790, 893, 1624, 1738, 2216
BseJI	GATNNNNATC	1 cut(s)	2274
BseLI	CCNNNNNNNGG	6 cut(s)	653, 830, 994, 2063, 2405, 2580
BseMI	GCAATG	1 cut(s)	1032
BseMII	CTCAG	5 cut(s)	690, 902, 1041, 1643, 1913
BseNI	ACTGG	4 cut(s)	640, 1730, 1792, 2215
BseRI	GAGGAG	6 cut(s)	716, 1007, 1010, 1862, 2010, 2201
BseX3I	CGGCCG	1 cut(s)	74
BseYI	CCCAGC	2 cut(s)	140, 2573
Bsh1236I	CGCG	3 cut(s)	615, 971, 1389
Bsh1285I	CGRYCG	1 cut(s)	77
BshNI	GGYRCC	2 cut(s)	1097, 2584
BsiEI	CGRYCG	1 cut(s)	77
BsiHKAI	GWGCWC	4 cut(s)	573, 1928, 2124, 2195
BsiSI	CCGG	4 cut(s)	77, 414, 1095, 1373
BslFI	GGGAC	1 cut(s)	2432
BslI	CCNNNNNNNGG	6 cut(s)	653, 830, 994, 2063, 2405, 2580
BsmAI	GTCTC	2 cut(s)	88, 2548
BsmFI	GGGAC	1 cut(s)	2432
BsmI	GAATGC	1 cut(s)	1975
Bso31I	GGTCTC	2 cut(s)	88, 2548
Bsp119I	TTCGAA	1 cut(s)	304
Bsp1286I	GDGCHC	6 cut(s)	573, 1227, 1709, 1928, 2124, 2195
Bsp1407I	TGTACA	1 cut(s)	1419
Bsp143I	GATC	9 cut(s)	20, 360, 386, 403, 1068, 1642, 1780, 2269, 2535
Bsp1720I	GCTNAGC	3 cut(s)	69, 1050, 1922
Bsp19I	CCATGG	1 cut(s)	1101
BspCNI	CTCAG	5 cut(s)	691, 903, 1042, 1642, 1914
BspFNI	CGCG	3 cut(s)	615, 971, 1389
BspLI	GGNNCC	6 cut(s)	625, 986, 1099, 1224, 1880, 2586
BspMAI	CTGCAG	3 cut(s)	822, 1399, 2011
BspMI	ACCTGC	1 cut(s)	796
BspPI	GGATC	3 cut(s)	368, 394, 1637
BspQI	GCTCTTC	1 cut(s)	2328
BspT104I	TTCGAA	1 cut(s)	304
BspT107I	GGYRCC	2 cut(s)	1097, 2584
BspTI	CTTAAG	1 cut(s)	1132
BspTNI	GGTCTC	2 cut(s)	88, 2548
BsrBI	CCGCTC	1 cut(s)	346
BsrDI	GCAATG	1 cut(s)	1032
BsrFI	RCCGGY	3 cut(s)	413, 1094, 1372
BsrGI	TGTACA	1 cut(s)	1419
BsrI	ACTGG	4 cut(s)	640, 1730, 1792, 2215
BssAI	RCCGGY	3 cut(s)	413, 1094, 1372
BssECI	CCNNGG	5 cut(s)	456, 1101, 1772, 2549, 2579
BssMI	GATC	9 cut(s)	20, 360, 386, 403, 1068, 1642, 1780, 2269, 2535
BssSI	CACGAG	1 cut(s)	989
BssT1I	CCWWGG	5 cut(s)	456, 1101, 1772, 2549, 2579
Bst2BI	CACGAG	1 cut(s)	989
Bst4CI	ACNGT	4 cut(s)	1117, 1181, 1304, 2063
Bst6I	CTCTTC	2 cut(s)	1014, 2328
BstAFI	CTTAAG	1 cut(s)	1132
BstAPI	GCANNNNNTGC	1 cut(s)	1457
BstAUI	TGTACA	1 cut(s)	1419
BstBAI	YACGTR	1 cut(s)	2402
BstBI	TTCGAA	1 cut(s)	304
BstC8I	GCNNGC	8 cut(s)	469, 751, 907, 1030, 1374, 1699, 2340, 2374
BstDSI	CCRYGG	1 cut(s)	1101
BstF5I	GGATG	6 cut(s)	729, 790, 893, 1624, 1738, 2216
BstFNI	CGCG	3 cut(s)	615, 971, 1389
BstHHI	GCGC	4 cut(s)	137, 169, 1389, 1443
BstKTI	GATC	9 cut(s)	23, 363, 389, 406, 1071, 1645, 1783, 2272, 2538
BstMAI	GTCTC	2 cut(s)	88, 2548
BstMBI	GATC	9 cut(s)	20, 360, 386, 403, 1068, 1642, 1780, 2269, 2535
BstMCI	CGRYCG	1 cut(s)	77
BstNSI	RCATGY	1 cut(s)	2359
BstSFI	CTRYAG	3 cut(s)	818, 1395, 2007
BstUI	CGCG	3 cut(s)	615, 971, 1389
BstV2I	GAAGAC	2 cut(s)	2023, 2172
BstX2I	RGATCY	1 cut(s)	360
BstXI	CCANNNNNNTGG	3 cut(s)	43, 1084, 1658
BstYI	RGATCY	1 cut(s)	360
BstZI	CGGCCG	1 cut(s)	74
Bsu36I	CCTNAGG	1 cut(s)	699
BtgI	CCRYGG	1 cut(s)	1101
BtgZI	GCGATG	2 cut(s)	986, 1404
BtsCI	GGATG	6 cut(s)	729, 790, 893, 1624, 1738, 2216
BtsI	GCAGTG	2 cut(s)	1071, 2392
BtsIMutI	CAGTG	5 cut(s)	629, 1071, 1799, 2068, 2392
BveI	ACCTGC	1 cut(s)	796
Cac8I	GCNNGC	8 cut(s)	469, 751, 907, 1030, 1374, 1699, 2340, 2374
CaiI	CAGNNNCTG	2 cut(s)	425, 1253
CfoI	GCGC	4 cut(s)	137, 169, 1389, 1443
Cfr10I	RCCGGY	3 cut(s)	413, 1094, 1372
Cfr13I	GGNCC	7 cut(s)	180, 392, 623, 1122, 2396, 2485, 2566
CseI	GACGC	3 cut(s)	716, 977, 2354
Csp6I	GTAC	5 cut(s)	88, 841, 1137, 1420, 2585
CviQI	GTAC	5 cut(s)	88, 841, 1137, 1420, 2585
DpnI	GATC	9 cut(s)	22, 362, 388, 405, 1070, 1644, 1782, 2271, 2537
DpnII	GATC	9 cut(s)	20, 360, 386, 403, 1068, 1642, 1780, 2269, 2535
DraI	TTTAAA	1 cut(s)	660
DrdI	GACNNNNNNGTC	1 cut(s)	1757
DriI	GACNNNNNGTC	1 cut(s)	1900
DseDI	GACNNNNNNGTC	1 cut(s)	1757
EaeI	YGGCCR	2 cut(s)	74, 2054
EagI	CGGCCG	1 cut(s)	74
Eam1104I	CTCTTC	2 cut(s)	1014, 2328
Eam1105I	GACNNNNNGTC	1 cut(s)	1900
EarI	CTCTTC	2 cut(s)	1014, 2328
EclXI	CGGCCG	1 cut(s)	74
Eco130I	CCWWGG	5 cut(s)	456, 1101, 1772, 2549, 2579
Eco147I	AGGCCT	2 cut(s)	909, 1777
Eco24I	GRGCYC	2 cut(s)	1227, 1709
Eco31I	GGTCTC	2 cut(s)	88, 2548
Eco47I	GGWCC	2 cut(s)	180, 1122
Eco52I	CGGCCG	1 cut(s)	74
Eco57I	CTGAAG	4 cut(s)	48, 1161, 1272, 1394
Eco81I	CCTNAGG	1 cut(s)	699
EcoO109I	RGGNCCY	2 cut(s)	392, 623
EcoRI	GAATTC	1 cut(s)	2099
EcoT14I	CCWWGG	5 cut(s)	456, 1101, 1772, 2549, 2579
EcoT38I	GRGCYC	2 cut(s)	1227, 1709
ErhI	CCWWGG	5 cut(s)	456, 1101, 1772, 2549, 2579
FalI	AAGNNNNNCTT	2 cut(s)	176, 208
FaqI	GGGAC	1 cut(s)	2432
FauI	CCCGC	1 cut(s)	594
FauNDI	CATATG	3 cut(s)	316, 964, 1831
FbaI	TGATCA	1 cut(s)	1068
FblI	GTMKAC	2 cut(s)	582, 2130
FokI	GGATG	6 cut(s)	736, 797, 900, 1631, 1745, 2203
FriOI	GRGCYC	2 cut(s)	1227, 1709
GlaI	GCGC	4 cut(s)	136, 168, 1388, 1442
GsaI	CCCAGC	2 cut(s)	144, 2577
GsuI	CTGGAG	3 cut(s)	150, 447, 2013
HapII	CCGG	4 cut(s)	77, 414, 1095, 1373
HgaI	GACGC	3 cut(s)	716, 977, 2354
HhaI	GCGC	4 cut(s)	137, 169, 1389, 1443
Hin6I	GCGC	4 cut(s)	135, 167, 1387, 1441
HinP1I	GCGC	4 cut(s)	135, 167, 1387, 1441
HincII	GTYRAC	2 cut(s)	496, 1888
HindII	GTYRAC	2 cut(s)	496, 1888
HinfI	GANTC	7 cut(s)	273, 639, 814, 1145, 1283, 1435, 2475
HpaI	GTTAAC	1 cut(s)	496
HpaII	CCGG	4 cut(s)	77, 414, 1095, 1373
HphI	GGTGA	8 cut(s)	575, 1105, 1751, 2128, 2218, 2460, 2508, 2538
Hpy166II	GTNNAC	7 cut(s)	496, 583, 1420, 1569, 1692, 1888, 2131
Hpy188I	TCNGA	6 cut(s)	1092, 1150, 1255, 1282, 1413, 1632
Hpy8I	GTNNAC	7 cut(s)	496, 583, 1420, 1569, 1692, 1888, 2131
HpyCH4III	ACNGT	4 cut(s)	1117, 1181, 1304, 2063
HpyCH4IV	ACGT	1 cut(s)	2401
HpySE526I	ACGT	1 cut(s)	2401
HspAI	GCGC	4 cut(s)	135, 167, 1387, 1441
KpnI	GGTACC	1 cut(s)	2588
KroI	GCCGGC	1 cut(s)	1372
KroNI	GCCGGC	1 cut(s)	1374
Ksp22I	TGATCA	1 cut(s)	1068
KspAI	GTTAAC	1 cut(s)	496
Kzo9I	GATC	9 cut(s)	20, 360, 386, 403, 1068, 1642, 1780, 2269, 2535
LguI	GCTCTTC	1 cut(s)	2328
LmnI	GCTCC	8 cut(s)	118, 290, 740, 990, 1222, 1997, 2298, 2382
LweI	GCATC	5 cut(s)	49, 714, 1259, 1381, 1806
MaeII	ACGT	1 cut(s)	2401
MaeIII	GTNAC	5 cut(s)	1427, 2066, 2206, 2230, 2476
MalI	GATC	9 cut(s)	22, 362, 388, 405, 1070, 1644, 1782, 2271, 2537
MbiI	CCGCTC	1 cut(s)	346
MboI	GATC	9 cut(s)	20, 360, 386, 403, 1068, 1642, 1780, 2269, 2535
MfeI	CAATTG	1 cut(s)	948
MflI	RGATCY	1 cut(s)	360
MhlI	GDGCHC	6 cut(s)	573, 1227, 1709, 1928, 2124, 2195
MlsI	TGGCCA	1 cut(s)	2056
MluNI	TGGCCA	1 cut(s)	2056
MlyI	GAGTC	2 cut(s)	1429, 2484
MmeI	TCCRAC	4 cut(s)	338, 1710, 1810, 2102
Mox20I	TGGCCA	1 cut(s)	2056
MroNI	GCCGGC	1 cut(s)	1372
MroXI	GAANNNNTTC	1 cut(s)	264
MscI	TGGCCA	1 cut(s)	2056
MseI	TTAA	6 cut(s)	495, 659, 684, 864, 918, 1133
MslI	CAYNNNNRTG	2 cut(s)	41, 1656
Msp20I	TGGCCA	1 cut(s)	2056
MspA1I	CMGCKG	5 cut(s)	140, 172, 425, 2012, 2429
MspCI	CTTAAG	1 cut(s)	1132
MspI	CCGG	4 cut(s)	77, 414, 1095, 1373
MunI	CAATTG	1 cut(s)	948
Mva1269I	GAATGC	1 cut(s)	1975
MvnI	CGCG	3 cut(s)	615, 971, 1389
NaeI	GCCGGC	1 cut(s)	1374
NcoI	CCATGG	1 cut(s)	1101
NdeI	CATATG	3 cut(s)	316, 964, 1831
NdeII	GATC	9 cut(s)	20, 360, 386, 403, 1068, 1642, 1780, 2269, 2535
NgoMIV	GCCGGC	1 cut(s)	1372
NlaIV	GGNNCC	6 cut(s)	625, 986, 1099, 1224, 1880, 2586
NmeAIII	GCCGAG	1 cut(s)	1417
NmuCI	GTSAC	4 cut(s)	2066, 2206, 2230, 2476
NspI	RCATGY	1 cut(s)	2359
NspV	TTCGAA	1 cut(s)	304
OliI	CACNNNNGTG	1 cut(s)	41
PceI	AGGCCT	2 cut(s)	909, 1777
PciI	ACATGT	1 cut(s)	2355
PciSI	GCTCTTC	1 cut(s)	2328
PctI	GAATGC	1 cut(s)	1975
PdiI	GCCGGC	1 cut(s)	1374
PdmI	GAANNNNTTC	1 cut(s)	264
PfeI	GAWTC	5 cut(s)	273, 639, 814, 1145, 1283
PflMI	CCANNNNNTGG	2 cut(s)	2063, 2405
PleI	GAGTC	2 cut(s)	1429, 2483
PpsI	GAGTC	2 cut(s)	1429, 2483
Ppu21I	YACGTR	1 cut(s)	2402
PscI	ACATGT	1 cut(s)	2355
PsiI	TTATAA	1 cut(s)	552
PspFI	CCCAGC	2 cut(s)	140, 2573
PspN4I	GGNNCC	6 cut(s)	625, 986, 1099, 1224, 1880, 2586
PspPI	GGNCC	7 cut(s)	180, 392, 623, 1122, 2396, 2485, 2566
PstI	CTGCAG	3 cut(s)	822, 1399, 2011
PstNI	CAGNNNCTG	2 cut(s)	425, 1253
PsuI	RGATCY	1 cut(s)	360
PvuII	CAGCTG	4 cut(s)	140, 425, 2012, 2429
RsaI	GTAC	5 cut(s)	89, 842, 1138, 1421, 2586
RsaNI	GTAC	5 cut(s)	88, 841, 1137, 1420, 2585
RseI	CAYNNNNRTG	2 cut(s)	41, 1656
SapI	GCTCTTC	1 cut(s)	2328
SaqAI	TTAA	6 cut(s)	495, 659, 684, 864, 918, 1133
Sau3AI	GATC	9 cut(s)	20, 360, 386, 403, 1068, 1642, 1780, 2269, 2535
Sau96I	GGNCC	7 cut(s)	180, 392, 623, 1122, 2396, 2485, 2566
ScaI	AGTACT	1 cut(s)	1138
SchI	GAGTC	2 cut(s)	1429, 2484
SduI	GDGCHC	6 cut(s)	573, 1227, 1709, 1928, 2124, 2195
SfaNI	GCATC	5 cut(s)	49, 714, 1259, 1381, 1806
SfcI	CTRYAG	3 cut(s)	818, 1395, 2007
SfuI	TTCGAA	1 cut(s)	304
SinI	GGWCC	2 cut(s)	180, 1122
SmiMI	CAYNNNNRTG	2 cut(s)	41, 1656
SmlI	CTYRAG	4 cut(s)	1132, 2042, 2285, 2450
SmoI	CTYRAG	4 cut(s)	1132, 2042, 2285, 2450
SpeI	ACTAGT	1 cut(s)	2020
SseBI	AGGCCT	2 cut(s)	909, 1777
StuI	AGGCCT	2 cut(s)	909, 1777
StyI	CCWWGG	5 cut(s)	456, 1101, 1772, 2549, 2579
TaaI	ACNGT	4 cut(s)	1117, 1181, 1304, 2063
TaiI	ACGT	1 cut(s)	2404
TaqI	TCGA	2 cut(s)	304, 1533
TatI	WGTACW	2 cut(s)	1136, 1419
TauI	GCSGC	5 cut(s)	76, 172, 618, 1379, 2490
TfiI	GAWTC	5 cut(s)	273, 639, 814, 1145, 1283
Tru1I	TTAA	6 cut(s)	495, 659, 684, 864, 918, 1133
Tru9I	TTAA	6 cut(s)	495, 659, 684, 864, 918, 1133
TscAI	CASTG	5 cut(s)	636, 1078, 1799, 2068, 2392
TseFI	GTSAC	4 cut(s)	2066, 2206, 2230, 2476
Tsp45I	GTSAC	4 cut(s)	2066, 2206, 2230, 2476
TspGWI	ACGGA	2 cut(s)	193, 873
TspRI	CASTG	5 cut(s)	636, 1078, 1799, 2068, 2392
Van91I	CCANNNNNTGG	2 cut(s)	2063, 2405
Vha464I	CTTAAG	1 cut(s)	1132
VpaK11BI	GGWCC	2 cut(s)	180, 1122
XapI	RAATTY	3 cut(s)	509, 866, 2099
XceI	RCATGY	1 cut(s)	2359
XmaJI	CCTAGG	1 cut(s)	2549
XmiI	GTMKAC	2 cut(s)	582, 2130
XmnI	GAANNNNTTC	1 cut(s)	264
ZrmI	AGTACT	1 cut(s)	1138

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.