Rw6G043570

Short calmodulin-binding motif containing conserved Ile and Gln residues.

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
Physical Location & Seq
Reverse (-)
66832809 .. 66835289
2481 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw6G043570.1

Sequence Viewer

Length: 1512 bp
ATGGGTCTGACCGGCACCATGGAAACACTCACCGTGAGATCCATGTGCTTAAGTACTGAAGATTCAGAACCACAAAACAAGTCTAACGGGTTTGACTATAAGAAAAGTACGGAAAGGTCAATGGGCTTCAAGAAACGGGAACCCAAAGAAGAAAAACTCAAAAAAGCATCTGATACATTTGATGAGAAATCACATTCAGATTCTTCAGTTGGTAGAAACTGTGAAAAAATGCAGATAAAGAAACCCACAATACTGCTTCCTGAACCAATCATGTTGTTTTCTCCAAAGCCGGCGGCTAGTGAGCGCGATGCTGCAGCAACTAGGCTTCAGAAAGTGTACAAGAGTTACAGGACTCGGCGCAACCTCGCAGATTGTGCTGTTGTGGTTGAGGAACTATGGTGGAAAGCCGTAGAGTTGGCAGCTCTGGAAAGAAATTCAGTGTCATTCTTCGACATTGAGAAACATGAAACTGCTGTGTCAAAGTGGACAAGAGCTAGGAAAAGGGCAGCCAAGTTAGGGAAGGGGTTGTGCAAGGATGAGAAGGCTCAGAAACTAGCCCTGCAGCATTGGCTTGAAGCTATTGATCCACGCCATCGGTATGGACACAATTTGCAATTCTACTATGATGTGTGGACTGCTTGCAAGAGCACTCAACCTTTCTTCTACTGGTTGGATGTTGGTGATGGTAAAGACACAAATGTCAAGAAGTGTCCAAGGCCTGATCTCCAACGCCAGTGCATCAAATATCTTGAACCAAGAGAGAGAGAAGCATATGAAGTGATTGTCGAGGAGGGAAAGCTAGTGCAAAAGCAATCAGGGTTCCTTGTTGACACAGACGAAGGGTCAAAGTGGATATTTGTGCTGAGCACATCAAGGTCTTTATATGTAGGCCAGAAAAAGAAAGGTGTTTTTCAGCATTCAAGTTTCCTCTCTGGAGGGGCTACTACTGCAGCTGGAAGACTAGTTGCTCATAATGGGGTTCTTGAGGCTATATGGCCATACAGTGGTCACTATCTTCCAACCGCAGACAACTTCAAGGAATTCATTAGCTTCCTGAAAGAGCACAATGTAGACCTCACCAATGTCAAGATGTATGCTGTTGATGAAGACAAAGCATATCAAAATGAGGAGTGCTCCAAGCCAGAGGTGACTGGTTCATCCACAACCAAAGTGACCTTGGATGATTCTAGTAGCGGTGTTGCCATTGAAGTTCCAGCAGATCATCATCAACAACTTGAGAAAGAAGAACAAGCACAAGCATTTGACATGTCAAAGCGTCTGGCTTGCAAGTGGAGCAGTGGCATTGGGCCACGTATTGGGTGTGTGAGGGACTATCCAGCAAACCTTCAATCCCTAGCTCTTGAGAAAGTCAATCTATCACCAAGAGTCTCATTGGGCCGCCATGAAAGTTATGCCCCAATCCCTTCACCTAGACCAAGCCCAAAGATCAGGGTCTCACCTAGGCTTTCCTATATGGGCCTCCCCAGCCCAAGGGTACCCAATTCCAATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

503

Amino Acids

56.87

Weight (kDa)

9.01

Isoelectric Point (pI)

50.74

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 698
Acc65I GGTACC 1 cut(s) 1495
AccB1I GGYRCC 2 cut(s) 14, 1495
AccB7I CCANNNNNTGG 2 cut(s) 1004, 1316
AccI GTMKAC 1 cut(s) 1071
AccII CGCG 1 cut(s) 306
AciI CCGC 4 cut(s) 293, 1023, 1194, 1399
AclWI GGATC 2 cut(s) 33, 578
AcoI YGGCCR 1 cut(s) 995
AcsI RAATTY 2 cut(s) 433, 1040
AcuI CTGAAG 3 cut(s) 78, 189, 311
AfaI GTAC 4 cut(s) 55, 109, 338, 1497
AfiI CCNNNNNNNGG 4 cut(s) 516, 1004, 1316, 1491
AflII CTTAAG 1 cut(s) 49
AflIII ACRYGT 1 cut(s) 1266
AgsI TTSAA 7 cut(s) 130, 575, 752, 921, 1036, 1208, 1349
AhdI GACNNNNNGTC 1 cut(s) 841
AhlI ACTAGT 1 cut(s) 961
AluBI AGCT 7 cut(s) 422, 494, 578, 799, 953, 1050, 1358
AluI AGCT 7 cut(s) 422, 494, 578, 799, 953, 1050, 1358
Alw21I GWGCWC 4 cut(s) 650, 869, 1065, 1136
Alw26I GTCTC 2 cut(s) 1393, 1459
AlwI GGATC 2 cut(s) 33, 578
AoxI GGCC 6 cut(s) 716, 889, 995, 1307, 1396, 1477
ApeKI GCWGC 6 cut(s) 311, 314, 419, 506, 562, 950
ApoI RAATTY 2 cut(s) 433, 1040
Asp718I GGTACC 1 cut(s) 1495
AspA2I CCTAGG 1 cut(s) 1460
AspLEI GCGC 2 cut(s) 306, 360
AspS9I GGNCC 3 cut(s) 1307, 1396, 1477
AsuHPI GGTGA 7 cut(s) 22, 692, 1069, 1159, 1371, 1419, 1449
AvrII CCTAGG 1 cut(s) 1460
BalI TGGCCA 1 cut(s) 997
BanI GGYRCC 2 cut(s) 14, 1495
BbsI GAAGAC 2 cut(s) 964, 1113
Bbv12I GWGCWC 4 cut(s) 650, 869, 1065, 1136
BbvI GCAGC 6 cut(s) 298, 326, 431, 518, 574, 962
BccI CCATC 2 cut(s) 600, 677
BceAI ACGGC 1 cut(s) 392
BcoDI GTCTC 2 cut(s) 1393, 1459
BcuI ACTAGT 1 cut(s) 961
BfmI CTRYAG 3 cut(s) 312, 560, 948
BfrI CTTAAG 1 cut(s) 49
BisI GCNGC 8 cut(s) 294, 312, 315, 420, 507, 563, 951, 1399
BlnI CCTAGG 1 cut(s) 1460
BlpI GCTNAGC 1 cut(s) 863
BlsI GCNGC 8 cut(s) 295, 313, 316, 421, 508, 564, 952, 1400
BmcAI AGTACT 1 cut(s) 55
BmeRI GACNNNNNGTC 1 cut(s) 841
BmgT120I GGNCC 3 cut(s) 1307, 1396, 1477
BmiI GGNNCC 4 cut(s) 16, 141, 821, 1497
BmsI GCATC 3 cut(s) 176, 298, 747
BpiI GAAGAC 2 cut(s) 964, 1113
BplI GAGNNNNNCTC 2 cut(s) 1118, 1150
BpmI CTGGAG 1 cut(s) 954
Bpu1102I GCTNAGC 1 cut(s) 863
BpuEI CTTGAG 3 cut(s) 1004, 1256, 1382
BsaAI YACGTR 1 cut(s) 1313
BsaBI GATNNNNATC 1 cut(s) 1224
BsaI GGTCTC 1 cut(s) 1459
BsaJI CCNNGG 5 cut(s) 18, 713, 1176, 1460, 1490
Bsc4I CCNNNNNNNGG 4 cut(s) 516, 1004, 1316, 1491
Bse118I RCCGGY 2 cut(s) 11, 289
Bse1I ACTGG 3 cut(s) 671, 733, 1156
Bse8I GATNNNNATC 1 cut(s) 1224
BseDI CCNNGG 5 cut(s) 18, 713, 1176, 1460, 1490
BseGI GGATG 4 cut(s) 541, 679, 1157, 1186
BseJI GATNNNNATC 1 cut(s) 1224
BseLI CCNNNNNNNGG 4 cut(s) 516, 1004, 1316, 1491
BseMII CTCAG 2 cut(s) 560, 854
BseNI ACTGG 3 cut(s) 671, 733, 1156
BseRI GAGGAG 2 cut(s) 803, 1142
BseXI GCAGC 6 cut(s) 298, 326, 431, 518, 574, 962
BseYI CCCAGC 1 cut(s) 1484
Bsh1236I CGCG 1 cut(s) 306
BshFI GGCC 6 cut(s) 718, 891, 997, 1309, 1398, 1479
BshNI GGYRCC 2 cut(s) 14, 1495
BsiHKAI GWGCWC 4 cut(s) 650, 869, 1065, 1136
BsiSI CCGG 2 cut(s) 12, 290
BslFI GGGAC 1 cut(s) 1343
BslI CCNNNNNNNGG 4 cut(s) 516, 1004, 1316, 1491
BsmAI GTCTC 2 cut(s) 1393, 1459
BsmFI GGGAC 1 cut(s) 1343
BsmI GAATGC 1 cut(s) 916
BsnI GGCC 6 cut(s) 718, 891, 997, 1309, 1398, 1479
Bso31I GGTCTC 1 cut(s) 1459
Bsp1286I GDGCHC 4 cut(s) 650, 869, 1065, 1136
Bsp1407I TGTACA 1 cut(s) 336
Bsp143I GATC 5 cut(s) 38, 583, 721, 1219, 1446
Bsp1720I GCTNAGC 1 cut(s) 863
Bsp19I CCATGG 1 cut(s) 18
BspACI CCGC 4 cut(s) 293, 1023, 1194, 1399
BspANI GGCC 6 cut(s) 718, 891, 997, 1309, 1398, 1479
BspCNI CTCAG 2 cut(s) 559, 855
BspFNI CGCG 1 cut(s) 306
BspLI GGNNCC 4 cut(s) 16, 141, 821, 1497
BspMAI CTGCAG 3 cut(s) 316, 564, 952
BspPI GGATC 2 cut(s) 33, 578
BspT107I GGYRCC 2 cut(s) 14, 1495
BspTI CTTAAG 1 cut(s) 49
BspTNI GGTCTC 1 cut(s) 1459
BsrFI RCCGGY 2 cut(s) 11, 289
BsrGI TGTACA 1 cut(s) 336
BsrI ACTGG 3 cut(s) 671, 733, 1156
BssAI RCCGGY 2 cut(s) 11, 289
BssECI CCNNGG 5 cut(s) 18, 713, 1176, 1460, 1490
BssMI GATC 5 cut(s) 38, 583, 721, 1219, 1446
BssT1I CCWWGG 5 cut(s) 18, 713, 1176, 1460, 1490
Bst4CI ACNGT 3 cut(s) 34, 221, 1004
BstAFI CTTAAG 1 cut(s) 49
BstAPI GCANNNNNTGC 1 cut(s) 374
BstAUI TGTACA 1 cut(s) 336
BstBAI YACGTR 1 cut(s) 1313
BstC8I GCNNGC 3 cut(s) 291, 640, 1285
BstDEI CTNAG 2 cut(s) 546, 863
BstDSI CCRYGG 1 cut(s) 18
BstF5I GGATG 4 cut(s) 541, 679, 1157, 1186
BstFNI CGCG 1 cut(s) 306
BstHHI GCGC 2 cut(s) 306, 360
BstKTI GATC 5 cut(s) 41, 586, 724, 1222, 1449
BstMAI GTCTC 2 cut(s) 1393, 1459
BstMBI GATC 5 cut(s) 38, 583, 721, 1219, 1446
BstMWI GCNNNNNNNGC 5 cut(s) 374, 568, 947, 1293, 1485
BstNSI RCATGY 1 cut(s) 1270
BstSFI CTRYAG 3 cut(s) 312, 560, 948
BstUI CGCG 1 cut(s) 306
BstV1I GCAGC 6 cut(s) 298, 326, 431, 518, 574, 962
BstV2I GAAGAC 2 cut(s) 964, 1113
BstX2I RGATCY 1 cut(s) 38
BstXI CCANNNNNNTGG 1 cut(s) 599
BstYI RGATCY 1 cut(s) 38
BsuRI GGCC 6 cut(s) 718, 891, 997, 1309, 1398, 1479
BtgI CCRYGG 1 cut(s) 18
BtgZI GCGATG 1 cut(s) 321
BtsCI GGATG 4 cut(s) 541, 679, 1157, 1186
BtsI GCAGTG 1 cut(s) 1303
BtsIMutI CAGTG 4 cut(s) 444, 740, 1009, 1303
Cac8I GCNNGC 3 cut(s) 291, 640, 1285
CfoI GCGC 2 cut(s) 306, 360
Cfr10I RCCGGY 2 cut(s) 11, 289
Cfr13I GGNCC 3 cut(s) 1307, 1396, 1477
CseI GACGC 1 cut(s) 1265
Csp6I GTAC 4 cut(s) 54, 108, 337, 1496
CviAII CATG 6 cut(s) 19, 43, 271, 464, 1267, 1403
CviQI GTAC 4 cut(s) 54, 108, 337, 1496
DdeI CTNAG 2 cut(s) 546, 863
DpnI GATC 5 cut(s) 40, 585, 723, 1221, 1448
DpnII GATC 5 cut(s) 38, 583, 721, 1219, 1446
DrdI GACNNNNNNGTC 1 cut(s) 698
DriI GACNNNNNGTC 1 cut(s) 841
DseDI GACNNNNNNGTC 1 cut(s) 698
EaeI YGGCCR 1 cut(s) 995
Eam1105I GACNNNNNGTC 1 cut(s) 841
Eco130I CCWWGG 5 cut(s) 18, 713, 1176, 1460, 1490
Eco147I AGGCCT 1 cut(s) 718
Eco31I GGTCTC 1 cut(s) 1459
Eco57I CTGAAG 3 cut(s) 78, 189, 311
EcoRI GAATTC 1 cut(s) 1040
EcoT14I CCWWGG 5 cut(s) 18, 713, 1176, 1460, 1490
ErhI CCWWGG 5 cut(s) 18, 713, 1176, 1460, 1490
FaeI CATG 6 cut(s) 22, 46, 274, 467, 1270, 1406
FaqI GGGAC 1 cut(s) 1343
FatI CATG 6 cut(s) 18, 42, 270, 463, 1266, 1402
FauNDI CATATG 1 cut(s) 772
FblI GTMKAC 1 cut(s) 1071
Fnu4HI GCNGC 8 cut(s) 294, 312, 315, 420, 507, 563, 951, 1399
FokI GGATG 4 cut(s) 548, 686, 1144, 1193
Fsp4HI GCNGC 8 cut(s) 294, 312, 315, 420, 507, 563, 951, 1399
GlaI GCGC 2 cut(s) 305, 359
GluI GCNGC 8 cut(s) 294, 312, 315, 420, 507, 563, 951, 1399
GsaI CCCAGC 1 cut(s) 1488
GsuI CTGGAG 1 cut(s) 954
HaeIII GGCC 6 cut(s) 718, 891, 997, 1309, 1398, 1479
HapII CCGG 2 cut(s) 12, 290
HgaI GACGC 1 cut(s) 1265
HhaI GCGC 2 cut(s) 306, 360
Hin1II CATG 6 cut(s) 22, 46, 274, 467, 1270, 1406
Hin6I GCGC 2 cut(s) 304, 358
HinP1I GCGC 2 cut(s) 304, 358
HincII GTYRAC 1 cut(s) 829
HindII GTYRAC 1 cut(s) 829
HinfI GANTC 5 cut(s) 62, 200, 352, 1184, 1386
HpaII CCGG 2 cut(s) 12, 290
HphI GGTGA 7 cut(s) 22, 692, 1069, 1159, 1371, 1419, 1449
Hpy166II GTNNAC 5 cut(s) 337, 486, 633, 829, 1072
Hpy188I TCNGA 6 cut(s) 9, 67, 172, 199, 330, 549
Hpy8I GTNNAC 5 cut(s) 337, 486, 633, 829, 1072
HpyAV CCTTC 5 cut(s) 514, 535, 833, 1355, 1434
HpyCH4III ACNGT 3 cut(s) 34, 221, 1004
HpyCH4IV ACGT 1 cut(s) 1312
HpyF10VI GCNNNNNNNGC 5 cut(s) 374, 568, 947, 1293, 1485
HpyF3I CTNAG 2 cut(s) 546, 863
HpySE526I ACGT 1 cut(s) 1312
Hsp92II CATG 6 cut(s) 22, 46, 274, 467, 1270, 1406
HspAI GCGC 2 cut(s) 304, 358
KpnI GGTACC 1 cut(s) 1499
KroI GCCGGC 1 cut(s) 289
KroNI GCCGGC 1 cut(s) 291
Kzo9I GATC 5 cut(s) 38, 583, 721, 1219, 1446
LmnI GCTCC 2 cut(s) 1139, 1293
Lsp1109I GCAGC 6 cut(s) 298, 326, 431, 518, 574, 962
LweI GCATC 3 cut(s) 176, 298, 747
MaeII ACGT 1 cut(s) 1312
MaeIII GTNAC 4 cut(s) 344, 1007, 1147, 1171
MalI GATC 5 cut(s) 40, 585, 723, 1221, 1448
MboI GATC 5 cut(s) 38, 583, 721, 1219, 1446
MboII GAAGA 9 cut(s) 71, 161, 195, 439, 652, 969, 1007, 1118, 1256
MflI RGATCY 1 cut(s) 38
MhlI GDGCHC 4 cut(s) 650, 869, 1065, 1136
MlsI TGGCCA 1 cut(s) 997
MluCI AATT 6 cut(s) 433, 607, 614, 1040, 1501, 1507
MluNI TGGCCA 1 cut(s) 997
MlyI GAGTC 2 cut(s) 346, 1395
MmeI TCCRAC 3 cut(s) 651, 751, 1043
Mox20I TGGCCA 1 cut(s) 997
MroNI GCCGGC 1 cut(s) 289
MscI TGGCCA 1 cut(s) 997
MseI TTAA 1 cut(s) 50
MslI CAYNNNNRTG 1 cut(s) 597
Msp20I TGGCCA 1 cut(s) 997
MspA1I CMGCKG 1 cut(s) 953
MspCI CTTAAG 1 cut(s) 49
MspI CCGG 2 cut(s) 12, 290
Mva1269I GAATGC 1 cut(s) 916
MvnI CGCG 1 cut(s) 306
MwoI GCNNNNNNNGC 5 cut(s) 374, 568, 947, 1293, 1485
NaeI GCCGGC 1 cut(s) 291
NcoI CCATGG 1 cut(s) 18
NdeI CATATG 1 cut(s) 772
NdeII GATC 5 cut(s) 38, 583, 721, 1219, 1446
NgoMIV GCCGGC 1 cut(s) 289
NlaIII CATG 6 cut(s) 22, 46, 274, 467, 1270, 1406
NlaIV GGNNCC 4 cut(s) 16, 141, 821, 1497
NmeAIII GCCGAG 1 cut(s) 334
NmuCI GTSAC 3 cut(s) 1007, 1147, 1171
NspI RCATGY 1 cut(s) 1270
PceI AGGCCT 1 cut(s) 718
PciI ACATGT 1 cut(s) 1266
PctI GAATGC 1 cut(s) 916
PdiI GCCGGC 1 cut(s) 291
PfeI GAWTC 3 cut(s) 62, 200, 1184
PflMI CCANNNNNTGG 2 cut(s) 1004, 1316
PkrI GCNGC 8 cut(s) 295, 313, 316, 421, 508, 564, 952, 1400
PleI GAGTC 2 cut(s) 346, 1394
PpsI GAGTC 2 cut(s) 346, 1394
Ppu21I YACGTR 1 cut(s) 1313
PscI ACATGT 1 cut(s) 1266
PspFI CCCAGC 1 cut(s) 1484
PspN4I GGNNCC 4 cut(s) 16, 141, 821, 1497
PspPI GGNCC 3 cut(s) 1307, 1396, 1477
PstI CTGCAG 3 cut(s) 316, 564, 952
PsuI RGATCY 1 cut(s) 38
PvuII CAGCTG 1 cut(s) 953
RsaI GTAC 4 cut(s) 55, 109, 338, 1497
RsaNI GTAC 4 cut(s) 54, 108, 337, 1496
RseI CAYNNNNRTG 1 cut(s) 597
SaqAI TTAA 1 cut(s) 50
SatI GCNGC 8 cut(s) 294, 312, 315, 420, 507, 563, 951, 1399
Sau3AI GATC 5 cut(s) 38, 583, 721, 1219, 1446
Sau96I GGNCC 3 cut(s) 1307, 1396, 1477
ScaI AGTACT 1 cut(s) 55
SchI GAGTC 2 cut(s) 346, 1395
SduI GDGCHC 4 cut(s) 650, 869, 1065, 1136
SfaNI GCATC 3 cut(s) 176, 298, 747
SfcI CTRYAG 3 cut(s) 312, 560, 948
SmiMI CAYNNNNRTG 1 cut(s) 597
SmlI CTYRAG 4 cut(s) 49, 983, 1235, 1361
SmoI CTYRAG 4 cut(s) 49, 983, 1235, 1361
SpeI ACTAGT 1 cut(s) 961
Sse9I AATT 6 cut(s) 433, 607, 614, 1040, 1501, 1507
SseBI AGGCCT 1 cut(s) 718
SsiI CCGC 4 cut(s) 293, 1023, 1194, 1399
StuI AGGCCT 1 cut(s) 718
StyI CCWWGG 5 cut(s) 18, 713, 1176, 1460, 1490
TaaI ACNGT 3 cut(s) 34, 221, 1004
TaiI ACGT 1 cut(s) 1315
TaqI TCGA 2 cut(s) 450, 786
TasI AATT 6 cut(s) 433, 607, 614, 1040, 1501, 1507
TatI WGTACW 2 cut(s) 53, 336
TauI GCSGC 2 cut(s) 296, 1401
TfiI GAWTC 3 cut(s) 62, 200, 1184
Tru1I TTAA 1 cut(s) 50
Tru9I TTAA 1 cut(s) 50
TscAI CASTG 4 cut(s) 444, 740, 1009, 1303
TseFI GTSAC 3 cut(s) 1007, 1147, 1171
TseI GCWGC 6 cut(s) 311, 314, 419, 506, 562, 950
Tsp45I GTSAC 3 cut(s) 1007, 1147, 1171
TspDTI ATGAA 6 cut(s) 480, 789, 1033, 1119, 1146, 1419
TspGWI ACGGA 1 cut(s) 125
TspRI CASTG 4 cut(s) 444, 740, 1009, 1303
Van91I CCANNNNNTGG 2 cut(s) 1004, 1316
Vha464I CTTAAG 1 cut(s) 49
XapI RAATTY 2 cut(s) 433, 1040
XceI RCATGY 1 cut(s) 1270
XcmI CCANNNNNNNNNTGG 1 cut(s) 1174
XmaJI CCTAGG 1 cut(s) 1460
XmiI GTMKAC 1 cut(s) 1071
ZrmI AGTACT 1 cut(s) 55
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.