Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0011764

Physical Location & Seq

Genomic Coordinates Reverse (-)

36129212 .. 36134514

Gene Structure 5303 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G416000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2181 bp

ATGAAGAGAGGGAACGAAGAAAAGGTTATGGGACCTATGTTCCCAAGACTCCATGTGAATGATGCAGATAAAGGAGGGCCAAGAGCACCTCCAAGGAATAAGATGGCGCTCTATGAACAGCTCAGTATCCCTTCTCAGAGGTTCAACCCTGTGGTGATGCCTCTTAATCCAAATAACACTAGCAGTGTGGTTCCCTCAGCTTTCTCGAGCCAGGGAAGTCGTTCTGAAGGAAATTTGCCTGTTCCGCTTCATGTTCATCCATCTACACCTAGTCGTCAGGCTGAGATGTTTCATGCTCGTCAATCTGATGGAGCAAATGAGAACACGCCCTTGACACAACCCGACCAAAGAAAGAAAGTCGGAGAGGAGGATGATTTTAGGGTGCCTGTATTTGTTCAATCAAGGATGGGTCTTTGTCATAGTAAAACTCAAATTGGTATTGATAAGGAAAAACTTGCTCCAATCGGCCCATCTCATTCTGGCCATACAGTGAAACTAAAAAATACGGGCAAGAAGGATCCAAAACAATTAAGCTCCCCAACTACTCTCAATTTGAGACGAGAATTGAGAAGTGAAAGAGAAGAGGATCTAATAAAAGTAAGTGGCCCGGTTAGGGACCATTCAGCAAAATCTGCCACAAAAATATCAACTAGACAAAAGATTGATGGGCCTGCAGAAGAAGTAAGTGCATCTCCAAATCAAGAGTATGCAGACTATCCTGTTCCTAGATTCAGCAGGTTATCTGAGAGTGATGCTTGCTTACAACAAGAGTCTAGATCTGGATCACAGCCAAACATCACTGGGCAAGGTGATGGTCTTGTTGAGTGTACAAGAGATGTAGAGAAGGGAGCTGTTTTCCAGGAAAGAAGTCTGTCTTATTCTGGGGAGGATCCTGGTGGTCCCAATGAGCTTGATAATGACAGTGAATACCGTGGAGATAGAACGTGTATTTCACCTCAAATGGGACATGTAGACAAAAGTGATGATGTCTCAGAGACCTCCATGGTGGATTCTATATCTGGCTTGGATATCTCTCCCGATGACGTTGTAGGAATAATAGGTCAGAAACATTTCTGGAAGGCAAGAAAAGCAATCGTCAATCAGCAAAGATTGTTTGCAGTGCAAGTATTTGAGTTGCATAGGCTCATTAAGGTCCAACGACTGATTGCTGGGTCTCCTAATCTTTTGCTTGAAGATACTGCTTTCCTAGGCACATCTTCTTTAAGGGGTTCTCCTGCAAAGAAACTTTCATCAGAGTATGTTGTAAAGCCACTACTACGTGTTGTAAAGCGCAAACATGAACCTGAGAAGCCAAACAACAAAATTGAATGTTCCGCAGAAAATGCAGTTGGGAAAACATCTCTTTCTTCTGTGAAAAATGGTAGTCAGACTTCAAATTATGGGCCATATGTAGGGAACCCACAGCCAACACCTGTCGGTACTGATAATAAAGCCAGTCCTTGGTGTTTCCATCAATCACCTGGACACCAGTTGTTAATTCCTGTAATGTCTCCCTCTGAAGGACTTGTATATAAGCCATATCATGGACCTGGATTTATGGGACCAGTTTGTGGAGGATGTGGACCTTTCAACTCAACTCCCATGACGGGTAACTTTGTTAAGCCAAACTATGGGGTTCCAGCTTCTCATCATCATCAAGGGACGGGGGTTCTTCCTGCCCCTCCTCCATTAGGCCATACTTACTTTCCTCCATATGGCATGTCCGTTATGAATCCAGCCATGCCAAGCTCAGGCATTGAACAAATGCATTGGTTTGCCGGACCTGGTTCACATGGTCAAATCGATCAGTTATCAGGAGGGGGAACAAACTCTAATGTGCAGCATCAAAGCTCATGCAATATGCCATCCCAGAAAAGTGGAGCTATTCCTCATGCCATGATGTTTCAGGCATCTAACGACAGTGAGCTACAAGGAAGTACTGCAAATAGTCCAGGTGACACAGCACGATTGGGGACAGATCAAAATGCTGAAGGAAGTGATGCTCTTCAACTTTTTCCAATGGCTCCGGTAATTCCAGAAGGAGTTGCCCAACCTCATGATTCAGGCCAGCCAACACGAGCGATTAGAGTTGTGCCACACAATCCAAGAACTGCAACTGCATCAGCTGCTCGTATTTTCCAATCTATACAAGAAGAGAGAAAACAGCATGATTCGATCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000902 GO:0001101 GO:0003006 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006950 GO:0007154 GO:0007165 GO:0007275 GO:0007602 GO:0007623 GO:0008150 GO:0009266 GO:0009314 GO:0009409 GO:0009416 GO:0009581 GO:0009582 GO:0009583 GO:0009585 GO:0009605 GO:0009628 GO:0009639 GO:0009648 GO:0009653 GO:0009719 GO:0009725 GO:0009733 GO:0009737 GO:0009791 GO:0009826 GO:0009889 GO:0009909 GO:0009987 GO:0010017 GO:0010031 GO:0010033 GO:0010119 GO:0010228 GO:0010468 GO:0010556 GO:0016043 GO:0016049 GO:0019219 GO:0019222 GO:0022414 GO:0023052 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032989 GO:0033993 GO:0040007 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048511 GO:0048573 GO:0048580 GO:0048589 GO:0048608 GO:0048731 GO:0048831 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0050879 GO:0050896 GO:0051171 GO:0051239 GO:0051252 GO:0051606 GO:0051716 GO:0060255 GO:0060560 GO:0061458 GO:0065007 GO:0071214 GO:0071478 GO:0071482 GO:0071489 GO:0071840 GO:0080090 GO:0097305 GO:0104004 GO:0140110 GO:1901700 GO:1903506 GO:2000026 GO:2000112 GO:2000241 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04712 map04712

Pfam Domains

Protein Families

No domains found.

Protein Analysis

727

Amino Acids

78.56

Weight (kDa)

7.7

Isoelectric Point (pI)

55.58

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011764)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G25930
fragaria_vesca	FvH4_2g32300 FvH4_2g32300
malus_domestica	MD08G1074100.v1.1 MD08G1074200.v1.1 MD15G1062000.v1.1
prunus_persica	Prupe.1G416000_v2.0.a1
pyrus_communis	pycom08g06130 pycom15g05860
rosa_chinensis	RchiOBHm_Chr6g0310391
rosa_laevigata	RLG00000010486
rosa_multiflora	Rmu_sc0027652.1_g000001
rosa_roxburghii	Rroxscaffold_7G00158570
rosa_rugosa	Rorug06G0379800
rosa_samantha	Rh6AG493800 Rh6BG503500 Rh6CG508700 Rh6DG494600
rosa_wichuraiana	Rw6G042970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	726
AccB1I	GGYRCC	1 cut(s)	382
AccB7I	CCANNNNNTGG	4 cut(s)	1461, 1544, 1571, 1631
AccI	GTMKAC	1 cut(s)	972
AciI	CCGC	2 cut(s)	245, 1335
AclWI	GGATC	6 cut(s)	512, 525, 594, 790, 884, 897
AcoI	YGGCCR	1 cut(s)	481
AcsI	RAATTY	1 cut(s)	232
AcuI	CTGAAG	3 cut(s)	246, 1539, 2010
AfaI	GTAC	3 cut(s)	829, 1441, 1939
AflIII	ACRYGT	3 cut(s)	944, 967, 1279
AgsI	TTSAA	8 cut(s)	145, 398, 1193, 1328, 1395, 1591, 1760, 2009
AjnI	CCWGG	7 cut(s)	210, 858, 892, 1480, 1549, 1783, 1951
AjuI	GAANNNNNNNTTGG	2 cut(s)	1332, 1364
Alw21I	GWGCWC	1 cut(s)	88
Alw26I	GTCTC	5 cut(s)	550, 989, 994, 1179, 1515
AlwI	GGATC	6 cut(s)	512, 525, 594, 790, 884, 897
Ama87I	CYCGRG	1 cut(s)	205
AoxI	GGCC	8 cut(s)	77, 466, 481, 604, 668, 1403, 1693, 2065
ApeKI	GCWGC	2 cut(s)	1840, 2126
ApoI	RAATTY	1 cut(s)	232
Asp700I	GAANNNNTTC	2 cut(s)	220, 1070
AspA2I	CCTAGG	1 cut(s)	1207
AspLEI	GCGC	2 cut(s)	109, 1293
AsuC2I	CCSGG	1 cut(s)	608
AsuHPI	GGTGA	5 cut(s)	166, 821, 945, 1470, 1967
AvaI	CYCGRG	1 cut(s)	205
AvaII	GGWCC	8 cut(s)	32, 616, 899, 1153, 1547, 1562, 1583, 1781
AvrII	CCTAGG	1 cut(s)	1207
BalI	TGGCCA	1 cut(s)	483
BamHI	GGATCC	2 cut(s)	517, 889
BanI	GGYRCC	1 cut(s)	382
BarI	GAAGNNNNNNTAC	2 cut(s)	1375, 1407
BauI	CACGAG	1 cut(s)	2076
Bbv12I	GWGCWC	1 cut(s)	88
BbvCI	CCTCAGC	1 cut(s)	196
BbvI	GCAGC	2 cut(s)	1852, 2113
BccI	CCATC	9 cut(s)	97, 268, 302, 400, 478, 659, 806, 1479, 1873
BciT130I	CCWGG	7 cut(s)	212, 860, 894, 1482, 1551, 1785, 1953
BciVI	GTATCC	1 cut(s)	137
BcnI	CCSGG	1 cut(s)	608
BcoDI	GTCTC	5 cut(s)	550, 989, 994, 1179, 1515
BfaI	CTAG	7 cut(s)	180, 270, 651, 726, 774, 1208, 2179
BfmI	CTRYAG	1 cut(s)	672
BfoI	RGCGCY	1 cut(s)	110
BfuAI	ACCTGC	1 cut(s)	726
BfuI	GTATCC	1 cut(s)	137
BglII	AGATCT	1 cut(s)	776
BisI	GCNGC	2 cut(s)	1841, 2127
BlnI	CCTAGG	1 cut(s)	1207
BlsI	GCNGC	2 cut(s)	1842, 2128
BmcAI	AGTACT	1 cut(s)	1939
Bme1390I	CCNGG	8 cut(s)	212, 608, 860, 894, 1482, 1551, 1785, 1953
Bme18I	GGWCC	8 cut(s)	32, 616, 899, 1153, 1547, 1562, 1583, 1781
BmeT110I	CYCGRG	1 cut(s)	205
BmrFI	CCNGG	8 cut(s)	212, 608, 860, 894, 1482, 1551, 1785, 1953
BmrI	ACTGGG	1 cut(s)	810
BmsI	GCATC	8 cut(s)	52, 147, 698, 742, 1852, 1919, 1990, 2129
BmuI	ACTGGG	1 cut(s)	810
Bpu10I	CCTNAGC	2 cut(s)	196, 1750
BpuMI	CCSGG	1 cut(s)	608
Bsa29I	ATCGAT	1 cut(s)	1803
BsaAI	YACGTR	1 cut(s)	1280
BsaBI	GATNNNNATC	1 cut(s)	781
BsaI	GGTCTC	2 cut(s)	989, 1179
BsaJI	CCNNGG	6 cut(s)	92, 211, 931, 1002, 1207, 1460
BsaWI	WCCGGW	1 cut(s)	2026
Bse1I	ACTGG	4 cut(s)	805, 1455, 1489, 1565
Bse8I	GATNNNNATC	1 cut(s)	781
BseBI	CCWGG	7 cut(s)	212, 860, 894, 1482, 1551, 1785, 1953
BseCI	ATCGAT	1 cut(s)	1803
BseDI	CCNNGG	6 cut(s)	92, 211, 931, 1002, 1207, 1460
BseGI	GGATG	5 cut(s)	256, 376, 411, 1583, 1865
BseJI	GATNNNNATC	1 cut(s)	781
BseMII	CTCAG	8 cut(s)	136, 149, 210, 273, 735, 1005, 1296, 1764
BseNI	ACTGG	4 cut(s)	805, 1455, 1489, 1565
BseRI	GAGGAG	2 cut(s)	380, 1674
BseXI	GCAGC	2 cut(s)	1852, 2113
BseYI	CCCAGC	1 cut(s)	1169
BsgI	GTGCAG	1 cut(s)	1859
BshFI	GGCC	8 cut(s)	79, 468, 483, 606, 670, 1405, 1695, 2067
BshNI	GGYRCC	1 cut(s)	382
BshVI	ATCGAT	1 cut(s)	1803
BsiHKAI	GWGCWC	1 cut(s)	88
BsiHKCI	CYCGRG	1 cut(s)	205
BsiSI	CCGG	3 cut(s)	608, 1779, 2027
BslFI	GGGAC	7 cut(s)	45, 629, 885, 978, 1575, 1675, 1987
BsmAI	GTCTC	5 cut(s)	550, 989, 994, 1179, 1515
BsmBI	CGTCTC	1 cut(s)	550
BsmFI	GGGAC	7 cut(s)	45, 629, 885, 978, 1575, 1675, 1987
BsnI	GGCC	8 cut(s)	79, 468, 483, 606, 670, 1405, 1695, 2067
Bso31I	GGTCTC	2 cut(s)	989, 1179
BsoBI	CYCGRG	1 cut(s)	205
Bsp1286I	GDGCHC	1 cut(s)	88
Bsp1407I	TGTACA	1 cut(s)	827
Bsp143I	GATC	8 cut(s)	517, 586, 776, 782, 889, 1804, 1978, 2175
Bsp19I	CCATGG	1 cut(s)	1002
BspACI	CCGC	2 cut(s)	245, 1335
BspANI	GGCC	8 cut(s)	79, 468, 483, 606, 670, 1405, 1695, 2067
BspCNI	CTCAG	8 cut(s)	135, 148, 209, 274, 736, 1004, 1297, 1763
BspDI	ATCGAT	1 cut(s)	1803
BspHI	TCATGA	1 cut(s)	2056
BspMAI	CTGCAG	1 cut(s)	676
BspMI	ACCTGC	1 cut(s)	726
BspPI	GGATC	6 cut(s)	512, 525, 594, 790, 884, 897
BspQI	GCTCTTC	1 cut(s)	2010
BspT107I	GGYRCC	1 cut(s)	382
BspTNI	GGTCTC	2 cut(s)	989, 1179
BsrGI	TGTACA	1 cut(s)	827
BsrI	ACTGG	4 cut(s)	805, 1455, 1489, 1565
BssECI	CCNNGG	6 cut(s)	92, 211, 931, 1002, 1207, 1460
BssMI	GATC	8 cut(s)	517, 586, 776, 782, 889, 1804, 1978, 2175
BssSI	CACGAG	1 cut(s)	2076
BssT1I	CCWWGG	4 cut(s)	92, 1002, 1207, 1460
Bst2BI	CACGAG	1 cut(s)	2076
Bst2UI	CCWGG	7 cut(s)	212, 860, 894, 1482, 1551, 1785, 1953
Bst4CI	ACNGT	4 cut(s)	490, 923, 932, 1922
Bst6I	CTCTTC	3 cut(s)	576, 2010, 2148
BstAPI	GCANNNNNTGC	3 cut(s)	632, 1343, 2126
BstAUI	TGTACA	1 cut(s)	827
BstBAI	YACGTR	1 cut(s)	1280
BstC8I	GCNNGC	3 cut(s)	672, 757, 2069
BstDEI	CTNAG	8 cut(s)	122, 135, 196, 282, 744, 991, 1305, 1750
BstDSI	CCRYGG	2 cut(s)	931, 1002
BstENI	CCTNNNNNAGG	1 cut(s)	1689
BstF5I	GGATG	5 cut(s)	256, 376, 411, 1583, 1865
BstH2I	RGCGCY	1 cut(s)	110
BstHHI	GCGC	2 cut(s)	109, 1293
BstKTI	GATC	8 cut(s)	520, 589, 779, 785, 892, 1807, 1981, 2178
BstMAI	GTCTC	5 cut(s)	550, 989, 994, 1179, 1515
BstMBI	GATC	8 cut(s)	517, 586, 776, 782, 889, 1804, 1978, 2175
BstMWI	GCNNNNNNNGC	5 cut(s)	244, 632, 1088, 1343, 2126
BstNI	CCWGG	7 cut(s)	212, 860, 894, 1482, 1551, 1785, 1953
BstNSI	RCATGY	2 cut(s)	971, 1723
BstSCI	CCNGG	8 cut(s)	210, 606, 858, 892, 1480, 1549, 1783, 1951
BstSFI	CTRYAG	1 cut(s)	672
BstV1I	GCAGC	2 cut(s)	1852, 2113
BstX2I	RGATCY	4 cut(s)	517, 586, 776, 889
BstXI	CCANNNNNNTGG	1 cut(s)	1877
BstYI	RGATCY	4 cut(s)	517, 586, 776, 889
Bsu15I	ATCGAT	1 cut(s)	1803
BsuI	GTATCC	1 cut(s)	137
BsuRI	GGCC	8 cut(s)	79, 468, 483, 606, 670, 1405, 1695, 2067
BsuTUI	ATCGAT	1 cut(s)	1803
BtgI	CCRYGG	2 cut(s)	931, 1002
BtsCI	GGATG	5 cut(s)	256, 376, 411, 1583, 1865
BtsI	GCAGTG	2 cut(s)	190, 1125
BtsIMutI	CAGTG	6 cut(s)	190, 495, 798, 928, 1125, 1927
BveI	ACCTGC	1 cut(s)	726
Cac8I	GCNNGC	3 cut(s)	672, 757, 2069
CciI	TCATGA	1 cut(s)	2056
CfoI	GCGC	2 cut(s)	109, 1293
ClaI	ATCGAT	1 cut(s)	1803
CsiI	ACCWGGT	1 cut(s)	1783
Csp6I	GTAC	3 cut(s)	828, 1440, 1938
CviQI	GTAC	3 cut(s)	828, 1440, 1938
DdeI	CTNAG	8 cut(s)	122, 135, 196, 282, 744, 991, 1305, 1750
DpnI	GATC	8 cut(s)	519, 588, 778, 784, 891, 1806, 1980, 2177
DpnII	GATC	8 cut(s)	517, 586, 776, 782, 889, 1804, 1978, 2175
EaeI	YGGCCR	1 cut(s)	481
Eam1104I	CTCTTC	3 cut(s)	576, 2010, 2148
EarI	CTCTTC	3 cut(s)	576, 2010, 2148
Eco130I	CCWWGG	4 cut(s)	92, 1002, 1207, 1460
Eco31I	GGTCTC	2 cut(s)	989, 1179
Eco32I	GATATC	1 cut(s)	1030
Eco47I	GGWCC	8 cut(s)	32, 616, 899, 1153, 1547, 1562, 1583, 1781
Eco57I	CTGAAG	3 cut(s)	246, 1539, 2010
Eco88I	CYCGRG	1 cut(s)	205
EcoNI	CCTNNNNNAGG	1 cut(s)	1689
EcoO109I	RGGNCCY	1 cut(s)	32
EcoRII	CCWGG	7 cut(s)	210, 858, 892, 1480, 1549, 1783, 1951
EcoRV	GATATC	1 cut(s)	1030
EcoT14I	CCWWGG	4 cut(s)	92, 1002, 1207, 1460
EcoT22I	ATGCAT	1 cut(s)	1770
ErhI	CCWWGG	4 cut(s)	92, 1002, 1207, 1460
Esp3I	CGTCTC	1 cut(s)	550
FalI	AAGNNNNNCTT	2 cut(s)	859, 891
FaqI	GGGAC	7 cut(s)	45, 629, 885, 978, 1575, 1675, 1987
FauNDI	CATATG	2 cut(s)	1408, 1714
FblI	GTMKAC	1 cut(s)	972
Fnu4HI	GCNGC	2 cut(s)	1841, 2127
FokI	GGATG	5 cut(s)	243, 383, 418, 1590, 1852
Fsp4HI	GCNGC	2 cut(s)	1841, 2127
FspBI	CTAG	7 cut(s)	180, 270, 651, 726, 774, 1208, 2179
GlaI	GCGC	2 cut(s)	108, 1292
GluI	GCNGC	2 cut(s)	1841, 2127
GsaI	CCCAGC	1 cut(s)	1173
HaeII	RGCGCY	1 cut(s)	110
HaeIII	GGCC	8 cut(s)	79, 468, 483, 606, 670, 1405, 1695, 2067
HapII	CCGG	3 cut(s)	608, 1779, 2027
HhaI	GCGC	2 cut(s)	109, 1293
Hin6I	GCGC	2 cut(s)	107, 1291
HinP1I	GCGC	2 cut(s)	107, 1291
HinfI	GANTC	7 cut(s)	48, 729, 770, 1010, 1732, 2060, 2171
HpaII	CCGG	3 cut(s)	608, 1779, 2027
HphI	GGTGA	5 cut(s)	166, 821, 945, 1470, 1967
Hpy166II	GTNNAC	4 cut(s)	828, 973, 1583, 1790
Hpy188III	TCNNGA	9 cut(s)	205, 701, 774, 780, 1037, 1075, 1815, 2036, 2057
Hpy8I	GTNNAC	4 cut(s)	828, 973, 1583, 1790
HpyAV	CCTTC	8 cut(s)	141, 221, 508, 838, 1072, 1514, 1985, 2033
HpyCH4III	ACNGT	4 cut(s)	490, 923, 932, 1922
HpyCH4IV	ACGT	3 cut(s)	944, 1044, 1279
HpyF10VI	GCNNNNNNNGC	5 cut(s)	244, 632, 1088, 1343, 2126
HpyF3I	CTNAG	8 cut(s)	122, 135, 196, 282, 744, 991, 1305, 1750
HpySE526I	ACGT	3 cut(s)	944, 1044, 1279
HspAI	GCGC	2 cut(s)	107, 1291
Kzo9I	GATC	8 cut(s)	517, 586, 776, 782, 889, 1804, 1978, 2175
LguI	GCTCTTC	1 cut(s)	2010
LmnI	GCTCC	6 cut(s)	311, 463, 539, 848, 1880, 2029
Lsp1109I	GCAGC	2 cut(s)	1852, 2113
LweI	GCATC	8 cut(s)	52, 147, 698, 742, 1852, 1919, 1990, 2129
MabI	ACCWGGT	1 cut(s)	1783
MaeI	CTAG	7 cut(s)	180, 270, 651, 726, 774, 1208, 2179
MaeII	ACGT	3 cut(s)	944, 1044, 1279
MaeIII	GTNAC	2 cut(s)	1610, 1955
MalI	GATC	8 cut(s)	519, 588, 778, 784, 891, 1806, 1980, 2177
MboI	GATC	8 cut(s)	517, 586, 776, 782, 889, 1804, 1978, 2175
MflI	RGATCY	4 cut(s)	517, 586, 776, 889
MhlI	GDGCHC	1 cut(s)	88
MlsI	TGGCCA	1 cut(s)	483
MluCI	AATT	9 cut(s)	232, 432, 527, 550, 563, 1323, 1396, 1497, 2031
MluNI	TGGCCA	1 cut(s)	483
MlyI	GAGTC	2 cut(s)	42, 779
MmeI	TCCRAC	2 cut(s)	340, 1180
Mox20I	TGGCCA	1 cut(s)	483
Mph1103I	ATGCAT	1 cut(s)	1770
MroXI	GAANNNNTTC	2 cut(s)	220, 1070
MscI	TGGCCA	1 cut(s)	483
MseI	TTAA	6 cut(s)	165, 530, 1149, 1223, 1496, 1620
MslI	CAYNNNNRTG	1 cut(s)	57
Msp20I	TGGCCA	1 cut(s)	483
MspA1I	CMGCKG	1 cut(s)	2126
MspI	CCGG	3 cut(s)	608, 1779, 2027
MspR9I	CCNGG	8 cut(s)	212, 608, 860, 894, 1482, 1551, 1785, 1953
MvaI	CCWGG	7 cut(s)	212, 860, 894, 1482, 1551, 1785, 1953
MwoI	GCNNNNNNNGC	5 cut(s)	244, 632, 1088, 1343, 2126
NciI	CCSGG	1 cut(s)	608
NcoI	CCATGG	1 cut(s)	1002
NdeI	CATATG	2 cut(s)	1408, 1714
NdeII	GATC	8 cut(s)	517, 586, 776, 782, 889, 1804, 1978, 2175
NmuCI	GTSAC	1 cut(s)	1955
NsiI	ATGCAT	1 cut(s)	1770
NspI	RCATGY	2 cut(s)	971, 1723
PaeR7I	CTCGAG	1 cut(s)	205
PagI	TCATGA	1 cut(s)	2056
PciI	ACATGT	1 cut(s)	967
PciSI	GCTCTTC	1 cut(s)	2010
PdmI	GAANNNNTTC	2 cut(s)	220, 1070
PfeI	GAWTC	5 cut(s)	729, 1010, 1732, 2060, 2171
PflMI	CCANNNNNTGG	4 cut(s)	1461, 1544, 1571, 1631
PfoI	TCCNGGA	1 cut(s)	858
PkrI	GCNGC	2 cut(s)	1842, 2128
PleI	GAGTC	2 cut(s)	42, 778
PpsI	GAGTC	2 cut(s)	42, 778
Ppu21I	YACGTR	1 cut(s)	1280
PpuMI	RGGWCCY	1 cut(s)	32
PscI	ACATGT	1 cut(s)	967
Psp5II	RGGWCCY	1 cut(s)	32
Psp6I	CCWGG	7 cut(s)	210, 858, 892, 1480, 1549, 1783, 1951
PspFI	CCCAGC	1 cut(s)	1169
PspGI	CCWGG	7 cut(s)	210, 858, 892, 1480, 1549, 1783, 1951
PspPPI	RGGWCCY	1 cut(s)	32
PstI	CTGCAG	1 cut(s)	676
PsuI	RGATCY	4 cut(s)	517, 586, 776, 889
PvuII	CAGCTG	1 cut(s)	2126
RsaI	GTAC	3 cut(s)	829, 1441, 1939
RsaNI	GTAC	3 cut(s)	828, 1440, 1938
RseI	CAYNNNNRTG	1 cut(s)	57
SapI	GCTCTTC	1 cut(s)	2010
SaqAI	TTAA	6 cut(s)	165, 530, 1149, 1223, 1496, 1620
SatI	GCNGC	2 cut(s)	1841, 2127
Sau3AI	GATC	8 cut(s)	517, 586, 776, 782, 889, 1804, 1978, 2175
ScaI	AGTACT	1 cut(s)	1939
SchI	GAGTC	2 cut(s)	42, 779
ScrFI	CCNGG	8 cut(s)	212, 608, 860, 894, 1482, 1551, 1785, 1953
SduI	GDGCHC	1 cut(s)	88
SexAI	ACCWGGT	1 cut(s)	1783
SfaNI	GCATC	8 cut(s)	52, 147, 698, 742, 1852, 1919, 1990, 2129
SfcI	CTRYAG	1 cut(s)	672
Sfr274I	CTCGAG	1 cut(s)	205
SinI	GGWCC	8 cut(s)	32, 616, 899, 1153, 1547, 1562, 1583, 1781
SlaI	CTCGAG	1 cut(s)	205
SmiMI	CAYNNNNRTG	1 cut(s)	57
SmlI	CTYRAG	1 cut(s)	205
SmoI	CTYRAG	1 cut(s)	205
Sse9I	AATT	9 cut(s)	232, 432, 527, 550, 563, 1323, 1396, 1497, 2031
SsiI	CCGC	2 cut(s)	245, 1335
SspMI	CTAG	7 cut(s)	180, 270, 651, 726, 774, 1208, 2179
StyD4I	CCNGG	8 cut(s)	210, 606, 858, 892, 1480, 1549, 1783, 1951
StyI	CCWWGG	4 cut(s)	92, 1002, 1207, 1460
TaaI	ACNGT	4 cut(s)	490, 923, 932, 1922
TaiI	ACGT	3 cut(s)	947, 1047, 1282
TaqI	TCGA	3 cut(s)	206, 1803, 2174
TasI	AATT	9 cut(s)	232, 432, 527, 550, 563, 1323, 1396, 1497, 2031
TatI	WGTACW	2 cut(s)	827, 1937
TfiI	GAWTC	5 cut(s)	729, 1010, 1732, 2060, 2171
Tru1I	TTAA	6 cut(s)	165, 530, 1149, 1223, 1496, 1620
Tru9I	TTAA	6 cut(s)	165, 530, 1149, 1223, 1496, 1620
TscAI	CASTG	6 cut(s)	190, 495, 805, 928, 1125, 1927
TseFI	GTSAC	1 cut(s)	1955
TseI	GCWGC	2 cut(s)	1840, 2126
Tsp45I	GTSAC	1 cut(s)	1955
TspDTI	ATGAA	8 cut(s)	17, 129, 239, 245, 281, 1239, 1314, 1745
TspGWI	ACGGA	1 cut(s)	1714
TspRI	CASTG	6 cut(s)	190, 495, 805, 928, 1125, 1927
Van91I	CCANNNNNTGG	4 cut(s)	1461, 1544, 1571, 1631
VpaK11BI	GGWCC	8 cut(s)	32, 616, 899, 1153, 1547, 1562, 1583, 1781
XagI	CCTNNNNNAGG	1 cut(s)	1689
XapI	RAATTY	1 cut(s)	232
XbaI	TCTAGA	1 cut(s)	773
XceI	RCATGY	2 cut(s)	971, 1723
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1478
XhoI	CTCGAG	1 cut(s)	205
XmaJI	CCTAGG	1 cut(s)	1207
XmiI	GTMKAC	1 cut(s)	972
XmnI	GAANNNNTTC	2 cut(s)	220, 1070
XspI	CTAG	7 cut(s)	180, 270, 651, 726, 774, 1208, 2179
ZrmI	AGTACT	1 cut(s)	1939
Zsp2I	ATGCAT	1 cut(s)	1770

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.