Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6D

Orthogroup ID

OG0011764

Physical Location & Seq

Genomic Coordinates Forward (+)

65338292 .. 65342679

Gene Structure 4388 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6DG494600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2121 bp

ATGAAGAGAGGAGGCAGAGATGATGAAAAGGTTATGGGGCCTATGTTCCCAAGACTCCATGTGAATGATGCAGATAAAGGAGGGCCAAGAGCACCTCCAAGGAACAAGATGGCCCTGTATGAACAGCTTAGTATACCCTCTCAGAGGTTCAACCATGGGGTTATGCCACTCAATCAAAACAGTATGGGATCCCCAGCTTTCTCCAATCAGGGGAATGGTCCTGAAAGAAATTTGCCTTTACCAATTCATGGTCGTCCATCTACACCTACTCATCACTCTGGCGGCCAGTCTGATGGAGTAAATGTGAACATGCCCTCAGTACAACCTCGGCAAAGAAAGAGGGCAGGAGATGAAGATGATTTTGCAGTTCCTGTATTTGTTCAATCAAGGATGGGTCAATGTCAGAGTAGAACTCAAAATGGTGGTGGTAAGGCAAAACTTACTCCCTTCAGCCAGTCTCATTCTGACTGTGCAATAAAATTCAAAAGTGCATCCAAGAAGGATAATAAACAAAGTAGCTCCCCCAGTCTCAATTTAAGACGAGAATTTAGAAGTGAGACAGAAGAGGATCTCAACGCATGTAGCTCAGCTAGGGACCATTCAGTAGAAGCTGCCACAAATATCTCAACTAGAGAAATGGTTGATGTTCCTGTAAATGTGAATACTTCTCCAAATGAAGAGTATGAAGACCATCCTGTTCCTACTTTCAACAGGTCTTGTGATAGTGATGCTTGCTTACAACAAAACTGTAGATCTGGGTCCCAACTAAACAACACTGAACAAGATGATAGTCTCCTTGAGTCCGCAAGGGATGTAGAGAAGGGAACTGTTTCACAGGCAAGAAGTGTTTCTCGTTACGGGGGGAATCATAGCAGCCCCAACGAGCCTGATAATGACAGTGAATACCATGTAGACAGAATGTGTATTTCAGCACAAATGGGAAATGCAGACAAAGGTGATGATGTCTCAGAGACCTCCATGGTGGATTCTATATCAGGCATGGACATCTCTCCTGATGATGTAGTAGGAATAATAGGTCAGAAGCATTTCTGGAAGGCAAGAAAGGCAATTGTCAATCAGCAAAGATTGTTTGCAGTGCAAGTATTTGAGTTGCATAGACTCATTAAGGTCCAACGACTGATTGCTGGATCTCCACATCTTTTGCTTGAAGATACTGCTTTCCTAGGCACATCCTTAAGGGGTTCTCCTGCAAAGAAACTCCCGGCAGAGTTTGTTGTAAAGCCACTACTACTAAAACGCAAGCATGAGTCTGAGAAGTCAAATAACAAAATGGAATGTTCTGCTGAAAATGCGGTTGGGAAAGCTTCTCTTTCTTCTGTGAAAAATGGTAGCCAGCCTTCACATTATGGACCATATGTAGGGAGTCCACCTCCTCCAGCACCTGTGCCTGCTGACAATAAAGCAGCTCCTTGGTGCTTCCATCAACCACCTGGGCATCAGTATTTAATTCCTGTTATGTCTCCTTCTGAAGGACTCATATACAAGCCATATAATGGACCTGGATTTGTGGGAGCAGCTTGTGGAGGATGTGGACCTTTTGGCTCAAGTCCCATGCCGGGTAACTTCATTAAGCCAGCATATGGGGTTCCGGGATCTCATCATCAAGGAATGGGGGTTCTCCCTGTCCCTCATCCTACTTACTTTCCTCCCTATGGCATGTCCGTCATGAATCCCACCATGTCAAGCTCAGCTGTTGAACAAATGAATTGGTTTGCTGGACCTGGTATGCATGGATCAACTGATCAGTTGTCAGGAAACTCTAATTTGCAGCATCAAAGCTCATGTAATATGCCAACACCCAAGAATGGAGCTATTCCTGCCATGAAGTCTCGAGCATCAAACCCCAGTGAGTTACAAGGAAGTACTGGTAATAGTCCCGGTGACAGAGCACCAGTTGCGACGGATCAAAATGCTGATGAAAGTGATGCACTTCAACTTTTCCCTACTGTTCCAGCAGTTCCAGAGCGAGTTCCCCAACCTCATGATACAAACCAGGCAACACGAGTGATAAGAGTTGTCCCGCACAATCCTAGATCGGCTACTGCATCAGCTGCTCGAATTTTCCAATCTATACAAGAAGAGAGAAAACAGTATGACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000902 GO:0001101 GO:0003006 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006950 GO:0007154 GO:0007165 GO:0007275 GO:0007602 GO:0007623 GO:0008150 GO:0009266 GO:0009314 GO:0009409 GO:0009416 GO:0009581 GO:0009582 GO:0009583 GO:0009585 GO:0009605 GO:0009628 GO:0009639 GO:0009648 GO:0009653 GO:0009719 GO:0009725 GO:0009733 GO:0009737 GO:0009791 GO:0009826 GO:0009889 GO:0009909 GO:0009987 GO:0010017 GO:0010031 GO:0010033 GO:0010119 GO:0010228 GO:0010468 GO:0010556 GO:0016043 GO:0016049 GO:0019219 GO:0019222 GO:0022414 GO:0023052 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032989 GO:0033993 GO:0040007 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048511 GO:0048573 GO:0048580 GO:0048589 GO:0048608 GO:0048731 GO:0048831 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0050879 GO:0050896 GO:0051171 GO:0051239 GO:0051252 GO:0051606 GO:0051716 GO:0060255 GO:0060560 GO:0061458 GO:0065007 GO:0071214 GO:0071478 GO:0071482 GO:0071489 GO:0071840 GO:0080090 GO:0097305 GO:0104004 GO:0140110 GO:1901700 GO:1903506 GO:2000026 GO:2000112 GO:2000241 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04712 map04712

Pfam Domains

Protein Families

No domains found.

Protein Analysis

706

Amino Acids

76.37

Weight (kDa)

7.35

Isoelectric Point (pI)

62.63

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011764)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G25930
fragaria_vesca	FvH4_2g32300 FvH4_2g32300
malus_domestica	MD08G1074100.v1.1 MD08G1074200.v1.1 MD15G1062000.v1.1
prunus_persica	Prupe.1G416000_v2.0.a1
pyrus_communis	pycom08g06130 pycom15g05860
rosa_chinensis	RchiOBHm_Chr6g0310391
rosa_laevigata	RLG00000010486
rosa_multiflora	Rmu_sc0027652.1_g000001
rosa_roxburghii	Rroxscaffold_7G00158570
rosa_rugosa	Rorug06G0379800
rosa_samantha	Rh6AG493800 Rh6BG503500 Rh6CG508700 Rh6DG494600
rosa_wichuraiana	Rw6G042970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	3 cut(s)	248, 1514, 1601
AccI	GTMKAC	2 cut(s)	133, 912
AciI	CCGC	4 cut(s)	282, 804, 1313, 2042
AclWI	GGATC	7 cut(s)	183, 196, 576, 1156, 1621, 1762, 1932
AcoI	YGGCCR	1 cut(s)	283
AcsI	RAATTY	4 cut(s)	229, 479, 545, 2079
AcuI	CTGAAG	2 cut(s)	433, 1509
AfaI	GTAC	2 cut(s)	321, 1885
AflII	CTTAAG	1 cut(s)	1195
AgsI	TTSAA	7 cut(s)	151, 383, 484, 709, 1169, 1718, 1955
AjnI	CCWGG	4 cut(s)	1450, 1519, 1741, 2013
AjuI	GAANNNNNNNTTGG	2 cut(s)	1299, 1331
AloI	GAACNNNNNNTCC	2 cut(s)	1620, 1652
Alw21I	GWGCWC	2 cut(s)	94, 1912
Alw26I	GTCTC	8 cut(s)	462, 533, 551, 797, 965, 970, 1485, 1854
AlwI	GGATC	7 cut(s)	183, 196, 576, 1156, 1621, 1762, 1932
AlwNI	CAGNNNCTG	2 cut(s)	371, 1403
Ama87I	CYCGRG	1 cut(s)	1851
AoxI	GGCC	4 cut(s)	38, 83, 111, 283
ApeKI	GCWGC	6 cut(s)	611, 873, 1424, 1535, 1789, 2072
ApoI	RAATTY	4 cut(s)	229, 479, 545, 2079
Asp700I	GAANNNNTTC	3 cut(s)	829, 847, 1046
AspA2I	CCTAGG	1 cut(s)	1183
AsuC2I	CCSGG	4 cut(s)	1223, 1578, 1611, 1899
AsuHPI	GGTGA	2 cut(s)	968, 1913
AvaI	CYCGRG	1 cut(s)	1851
AvaII	GGWCC	8 cut(s)	218, 595, 759, 1129, 1370, 1517, 1553, 1739
AvrII	CCTAGG	1 cut(s)	1183
BamHI	GGATCC	1 cut(s)	188
BarI	GAAGNNNNNNTAC	2 cut(s)	1342, 1374
BauI	CACGAG	1 cut(s)	2022
BbsI	GAAGAC	1 cut(s)	693
Bbv12I	GWGCWC	2 cut(s)	94, 1912
BbvI	GCAGC	6 cut(s)	598, 885, 1436, 1547, 1801, 2059
BccI	CCATC	6 cut(s)	103, 265, 287, 385, 699, 1449
BciT130I	CCWGG	4 cut(s)	1452, 1521, 1743, 2015
BclI	TGATCA	1 cut(s)	1762
BcnI	CCSGG	4 cut(s)	1223, 1578, 1611, 1899
BcoDI	GTCTC	8 cut(s)	462, 533, 551, 797, 965, 970, 1485, 1854
BfaI	CTAG	4 cut(s)	591, 630, 1184, 2052
BfmI	CTRYAG	1 cut(s)	748
BfrI	CTTAAG	1 cut(s)	1195
BglII	AGATCT	1 cut(s)	752
BisI	GCNGC	7 cut(s)	283, 612, 874, 1425, 1536, 1790, 2073
BlnI	CCTAGG	1 cut(s)	1183
BlpI	GCTNAGC	2 cut(s)	586, 1708
BlsI	GCNGC	7 cut(s)	284, 613, 875, 1426, 1537, 1791, 2074
BmcAI	AGTACT	1 cut(s)	1885
Bme1390I	CCNGG	8 cut(s)	1223, 1452, 1521, 1578, 1611, 1743, 1899, 2015
Bme18I	GGWCC	8 cut(s)	218, 595, 759, 1129, 1370, 1517, 1553, 1739
BmeT110I	CYCGRG	1 cut(s)	1851
BmiI	GGNNCC	6 cut(s)	39, 190, 596, 760, 761, 1608
BmrFI	CCNGG	8 cut(s)	1223, 1452, 1521, 1578, 1611, 1743, 1899, 2015
BmrI	ACTGGG	2 cut(s)	519, 1860
BmsI	GCATC	8 cut(s)	58, 500, 718, 1465, 1801, 1865, 1936, 2075
BmuI	ACTGGG	2 cut(s)	519, 1860
BpiI	GAAGAC	1 cut(s)	693
BplI	GAGNNNNNCTC	4 cut(s)	397, 429, 1375, 1407
BpmI	CTGGAG	1 cut(s)	1380
Bpu1102I	GCTNAGC	2 cut(s)	586, 1708
BpuEI	CTTGAG	2 cut(s)	818, 1549
BpuMI	CCSGG	4 cut(s)	1223, 1578, 1611, 1899
BsaI	GGTCTC	1 cut(s)	965
BsaJI	CCNNGG	7 cut(s)	98, 154, 326, 978, 1183, 1430, 1451
BsaXI	ACNNNNNCTCC	2 cut(s)	288, 318
Bse1I	ACTGG	6 cut(s)	286, 454, 525, 1866, 1891, 1913
BseBI	CCWGG	4 cut(s)	1452, 1521, 1743, 2015
BseDI	CCNNGG	7 cut(s)	98, 154, 326, 978, 1183, 1430, 1451
BseGI	GGATG	7 cut(s)	396, 491, 691, 817, 1190, 1553, 1651
BseMII	CTCAG	6 cut(s)	155, 330, 600, 981, 1263, 1722
BseNI	ACTGG	6 cut(s)	286, 454, 525, 1866, 1891, 1913
BseRI	GAGGAG	2 cut(s)	24, 1383
BseXI	GCAGC	6 cut(s)	598, 885, 1436, 1547, 1801, 2059
BseYI	CCCAGC	1 cut(s)	193
BshFI	GGCC	4 cut(s)	40, 85, 113, 285
BsiHKAI	GWGCWC	2 cut(s)	94, 1912
BsiHKCI	CYCGRG	1 cut(s)	1851
BsiSI	CCGG	4 cut(s)	1223, 1577, 1610, 1899
BslFI	GGGAC	6 cut(s)	608, 745, 1554, 1631, 1881, 2024
BsmAI	GTCTC	8 cut(s)	462, 533, 551, 797, 965, 970, 1485, 1854
BsmFI	GGGAC	6 cut(s)	608, 745, 1554, 1631, 1881, 2024
BsnI	GGCC	4 cut(s)	40, 85, 113, 285
Bso31I	GGTCTC	1 cut(s)	965
BsoBI	CYCGRG	1 cut(s)	1851
Bsp1286I	GDGCHC	2 cut(s)	94, 1912
Bsp143I	GATC	9 cut(s)	188, 568, 752, 1148, 1613, 1754, 1762, 1924, 2054
Bsp1720I	GCTNAGC	2 cut(s)	586, 1708
Bsp19I	CCATGG	2 cut(s)	154, 978
BspACI	CCGC	4 cut(s)	282, 804, 1313, 2042
BspANI	GGCC	4 cut(s)	40, 85, 113, 285
BspCNI	CTCAG	6 cut(s)	154, 329, 599, 980, 1264, 1721
BspHI	TCATGA	2 cut(s)	1686, 2002
BspLI	GGNNCC	6 cut(s)	39, 190, 596, 760, 761, 1608
BspPI	GGATC	7 cut(s)	183, 196, 576, 1156, 1621, 1762, 1932
BspTI	CTTAAG	1 cut(s)	1195
BspTNI	GGTCTC	1 cut(s)	965
BsrI	ACTGG	6 cut(s)	286, 454, 525, 1866, 1891, 1913
BssECI	CCNNGG	7 cut(s)	98, 154, 326, 978, 1183, 1430, 1451
BssMI	GATC	9 cut(s)	188, 568, 752, 1148, 1613, 1754, 1762, 1924, 2054
BssNAI	GTATAC	1 cut(s)	134
BssSI	CACGAG	1 cut(s)	2022
BssT1I	CCWWGG	5 cut(s)	98, 154, 978, 1183, 1430
Bst1107I	GTATAC	1 cut(s)	134
Bst2BI	CACGAG	1 cut(s)	2022
Bst2UI	CCWGG	4 cut(s)	1452, 1521, 1743, 2015
Bst4CI	ACNGT	7 cut(s)	182, 470, 749, 829, 899, 1969, 2112
Bst6I	CTCTTC	3 cut(s)	558, 672, 2094
BstAFI	CTTAAG	1 cut(s)	1195
BstAPI	GCANNNNNTGC	2 cut(s)	1916, 2072
BstC8I	GCNNGC	5 cut(s)	733, 1262, 1355, 1410, 1596
BstDEI	CTNAG	7 cut(s)	128, 141, 316, 586, 967, 1272, 1708
BstDSI	CCRYGG	2 cut(s)	154, 978
BstENI	CCTNNNNNAGG	2 cut(s)	142, 1488
BstF5I	GGATG	7 cut(s)	396, 491, 691, 817, 1190, 1553, 1651
BstKTI	GATC	9 cut(s)	191, 571, 755, 1151, 1616, 1757, 1765, 1927, 2057
BstMAI	GTCTC	8 cut(s)	462, 533, 551, 797, 965, 970, 1485, 1854
BstMBI	GATC	9 cut(s)	188, 568, 752, 1148, 1613, 1754, 1762, 1924, 2054
BstMWI	GCNNNNNNNGC	5 cut(s)	1064, 1310, 1838, 1916, 2072
BstNI	CCWGG	4 cut(s)	1452, 1521, 1743, 2015
BstNSI	RCATGY	3 cut(s)	313, 582, 1681
BstSCI	CCNGG	8 cut(s)	1221, 1450, 1519, 1576, 1609, 1741, 1897, 2013
BstSFI	CTRYAG	1 cut(s)	748
BstV1I	GCAGC	6 cut(s)	598, 885, 1436, 1547, 1801, 2059
BstV2I	GAAGAC	1 cut(s)	693
BstX2I	RGATCY	5 cut(s)	188, 568, 752, 1148, 1613
BstXI	CCANNNNNNTGG	1 cut(s)	293
BstYI	RGATCY	5 cut(s)	188, 568, 752, 1148, 1613
BstZ17I	GTATAC	1 cut(s)	134
BsuRI	GGCC	4 cut(s)	40, 85, 113, 285
BtgI	CCRYGG	2 cut(s)	154, 978
BtsCI	GGATG	7 cut(s)	396, 491, 691, 817, 1190, 1553, 1651
BtsI	GCAGTG	1 cut(s)	1101
BtsIMutI	CAGTG	4 cut(s)	774, 904, 1101, 1873
Cac8I	GCNNGC	5 cut(s)	733, 1262, 1355, 1410, 1596
CaiI	CAGNNNCTG	2 cut(s)	371, 1403
CciI	TCATGA	2 cut(s)	1686, 2002
CsiI	ACCWGGT	1 cut(s)	1741
Csp6I	GTAC	2 cut(s)	320, 1884
CspCI	CAANNNNNGTGG	2 cut(s)	1143, 1178
CviQI	GTAC	2 cut(s)	320, 1884
DdeI	CTNAG	7 cut(s)	128, 141, 316, 586, 967, 1272, 1708
DpnI	GATC	9 cut(s)	190, 570, 754, 1150, 1615, 1756, 1764, 1926, 2056
DpnII	GATC	9 cut(s)	188, 568, 752, 1148, 1613, 1754, 1762, 1924, 2054
EaeI	YGGCCR	1 cut(s)	283
Eam1104I	CTCTTC	3 cut(s)	558, 672, 2094
EarI	CTCTTC	3 cut(s)	558, 672, 2094
Eco130I	CCWWGG	5 cut(s)	98, 154, 978, 1183, 1430
Eco31I	GGTCTC	1 cut(s)	965
Eco47I	GGWCC	8 cut(s)	218, 595, 759, 1129, 1370, 1517, 1553, 1739
Eco57I	CTGAAG	2 cut(s)	433, 1509
Eco88I	CYCGRG	1 cut(s)	1851
EcoNI	CCTNNNNNAGG	2 cut(s)	142, 1488
EcoO109I	RGGNCCY	2 cut(s)	38, 759
EcoRII	CCWGG	4 cut(s)	1450, 1519, 1741, 2013
EcoT14I	CCWWGG	5 cut(s)	98, 154, 978, 1183, 1430
EcoT22I	ATGCAT	1 cut(s)	1752
ErhI	CCWWGG	5 cut(s)	98, 154, 978, 1183, 1430
FalI	AAGNNNNNCTT	2 cut(s)	1314, 1346
FaqI	GGGAC	6 cut(s)	608, 745, 1554, 1631, 1881, 2024
FauI	CCCGC	1 cut(s)	2049
FauNDI	CATATG	2 cut(s)	1375, 1600
FbaI	TGATCA	1 cut(s)	1762
FblI	GTMKAC	2 cut(s)	133, 912
Fnu4HI	GCNGC	7 cut(s)	283, 612, 874, 1425, 1536, 1790, 2073
FokI	GGATG	7 cut(s)	403, 478, 678, 824, 1177, 1560, 1638
Fsp4HI	GCNGC	7 cut(s)	283, 612, 874, 1425, 1536, 1790, 2073
FspBI	CTAG	4 cut(s)	591, 630, 1184, 2052
GluI	GCNGC	7 cut(s)	283, 612, 874, 1425, 1536, 1790, 2073
GsaI	CCCAGC	1 cut(s)	197
GsuI	CTGGAG	1 cut(s)	1380
HaeIII	GGCC	4 cut(s)	40, 85, 113, 285
HapII	CCGG	4 cut(s)	1223, 1577, 1610, 1899
HindIII	AAGCTT	1 cut(s)	1323
HinfI	GANTC	9 cut(s)	54, 800, 865, 986, 1119, 1268, 1384, 1494, 1690
HpaII	CCGG	4 cut(s)	1223, 1577, 1610, 1899
HphI	GGTGA	2 cut(s)	968, 1913
Hpy166II	GTNNAC	5 cut(s)	134, 307, 913, 1388, 1553
Hpy188I	TCNGA	8 cut(s)	144, 292, 405, 466, 970, 1041, 1273, 1489
Hpy188III	TCNNGA	8 cut(s)	221, 1013, 1051, 1687, 1773, 1851, 1982, 2003
Hpy8I	GTNNAC	5 cut(s)	134, 307, 913, 1388, 1553
Hpy99I	CGWCG	1 cut(s)	1924
HpyAV	CCTTC	7 cut(s)	457, 493, 814, 1048, 1368, 1484, 1494
HpyCH4III	ACNGT	7 cut(s)	182, 470, 749, 829, 899, 1969, 2112
HpyF10VI	GCNNNNNNNGC	5 cut(s)	1064, 1310, 1838, 1916, 2072
HpyF3I	CTNAG	7 cut(s)	128, 141, 316, 586, 967, 1272, 1708
KflI	GGGWCCC	1 cut(s)	759
Ksp22I	TGATCA	1 cut(s)	1762
Kzo9I	GATC	9 cut(s)	188, 568, 752, 1148, 1613, 1754, 1762, 1924, 2054
LmnI	GCTCC	4 cut(s)	524, 1432, 1532, 1829
Lsp1109I	GCAGC	6 cut(s)	598, 885, 1436, 1547, 1801, 2059
LweI	GCATC	8 cut(s)	58, 500, 718, 1465, 1801, 1865, 1936, 2075
MabI	ACCWGGT	1 cut(s)	1741
MaeI	CTAG	4 cut(s)	591, 630, 1184, 2052
MaeIII	GTNAC	4 cut(s)	854, 1580, 1872, 1901
MalI	GATC	9 cut(s)	190, 570, 754, 1150, 1615, 1756, 1764, 1926, 2056
MboI	GATC	9 cut(s)	188, 568, 752, 1148, 1613, 1754, 1762, 1924, 2054
MboII	GAAGA	8 cut(s)	16, 365, 575, 689, 698, 1181, 1326, 2111
MfeI	CAATTG	1 cut(s)	1068
MflI	RGATCY	5 cut(s)	188, 568, 752, 1148, 1613
MhlI	GDGCHC	2 cut(s)	94, 1912
MlyI	GAGTC	6 cut(s)	48, 809, 1113, 1277, 1393, 1488
MmeI	TCCRAC	1 cut(s)	1156
Mph1103I	ATGCAT	1 cut(s)	1752
MroXI	GAANNNNTTC	3 cut(s)	829, 847, 1046
MseI	TTAA	5 cut(s)	536, 1125, 1196, 1466, 1590
MslI	CAYNNNNRTG	1 cut(s)	63
MspA1I	CMGCKG	2 cut(s)	1712, 2072
MspCI	CTTAAG	1 cut(s)	1195
MspI	CCGG	4 cut(s)	1223, 1577, 1610, 1899
MspR9I	CCNGG	8 cut(s)	1223, 1452, 1521, 1578, 1611, 1743, 1899, 2015
MunI	CAATTG	1 cut(s)	1068
MvaI	CCWGG	4 cut(s)	1452, 1521, 1743, 2015
MwoI	GCNNNNNNNGC	5 cut(s)	1064, 1310, 1838, 1916, 2072
NciI	CCSGG	4 cut(s)	1223, 1578, 1611, 1899
NcoI	CCATGG	2 cut(s)	154, 978
NdeI	CATATG	2 cut(s)	1375, 1600
NdeII	GATC	9 cut(s)	188, 568, 752, 1148, 1613, 1754, 1762, 1924, 2054
NlaIV	GGNNCC	6 cut(s)	39, 190, 596, 760, 761, 1608
NmeAIII	GCCGAG	1 cut(s)	307
NmuCI	GTSAC	1 cut(s)	1901
NsiI	ATGCAT	1 cut(s)	1752
NspI	RCATGY	3 cut(s)	313, 582, 1681
PaeR7I	CTCGAG	1 cut(s)	1851
PagI	TCATGA	2 cut(s)	1686, 2002
PdmI	GAANNNNTTC	3 cut(s)	829, 847, 1046
PfeI	GAWTC	3 cut(s)	865, 986, 1690
PflMI	CCANNNNNTGG	3 cut(s)	248, 1514, 1601
PfoI	TCCNGGA	1 cut(s)	1609
PkrI	GCNGC	7 cut(s)	284, 613, 875, 1426, 1537, 1791, 2074
PleI	GAGTC	6 cut(s)	48, 808, 1113, 1276, 1392, 1488
PpsI	GAGTC	6 cut(s)	48, 808, 1113, 1276, 1392, 1488
PpuMI	RGGWCCY	1 cut(s)	759
Psp5II	RGGWCCY	1 cut(s)	759
Psp6I	CCWGG	4 cut(s)	1450, 1519, 1741, 2013
PspFI	CCCAGC	1 cut(s)	193
PspGI	CCWGG	4 cut(s)	1450, 1519, 1741, 2013
PspN4I	GGNNCC	6 cut(s)	39, 190, 596, 760, 761, 1608
PspPPI	RGGWCCY	1 cut(s)	759
PstNI	CAGNNNCTG	2 cut(s)	371, 1403
PsuI	RGATCY	5 cut(s)	188, 568, 752, 1148, 1613
PvuII	CAGCTG	2 cut(s)	1712, 2072
RsaI	GTAC	2 cut(s)	321, 1885
RsaNI	GTAC	2 cut(s)	320, 1884
RseI	CAYNNNNRTG	1 cut(s)	63
SaqAI	TTAA	5 cut(s)	536, 1125, 1196, 1466, 1590
SatI	GCNGC	7 cut(s)	283, 612, 874, 1425, 1536, 1790, 2073
Sau3AI	GATC	9 cut(s)	188, 568, 752, 1148, 1613, 1754, 1762, 1924, 2054
ScaI	AGTACT	1 cut(s)	1885
SchI	GAGTC	6 cut(s)	48, 809, 1113, 1277, 1393, 1488
ScrFI	CCNGG	8 cut(s)	1223, 1452, 1521, 1578, 1611, 1743, 1899, 2015
SduI	GDGCHC	2 cut(s)	94, 1912
SexAI	ACCWGGT	1 cut(s)	1741
SfaNI	GCATC	8 cut(s)	58, 500, 718, 1465, 1801, 1865, 1936, 2075
SfcI	CTRYAG	1 cut(s)	748
Sfr274I	CTCGAG	1 cut(s)	1851
SinI	GGWCC	8 cut(s)	218, 595, 759, 1129, 1370, 1517, 1553, 1739
SlaI	CTCGAG	1 cut(s)	1851
SmiMI	CAYNNNNRTG	1 cut(s)	63
SmlI	CTYRAG	4 cut(s)	797, 1195, 1564, 1851
SmoI	CTYRAG	4 cut(s)	797, 1195, 1564, 1851
SsiI	CCGC	4 cut(s)	282, 804, 1313, 2042
SspMI	CTAG	4 cut(s)	591, 630, 1184, 2052
StyD4I	CCNGG	8 cut(s)	1221, 1450, 1519, 1576, 1609, 1741, 1897, 2013
StyI	CCWWGG	5 cut(s)	98, 154, 978, 1183, 1430
TaaI	ACNGT	7 cut(s)	182, 470, 749, 829, 899, 1969, 2112
TaqI	TCGA	2 cut(s)	1852, 2077
TatI	WGTACW	2 cut(s)	319, 1883
TauI	GCSGC	1 cut(s)	285
TfiI	GAWTC	3 cut(s)	865, 986, 1690
Tru1I	TTAA	5 cut(s)	536, 1125, 1196, 1466, 1590
Tru9I	TTAA	5 cut(s)	536, 1125, 1196, 1466, 1590
TscAI	CASTG	4 cut(s)	781, 904, 1101, 1873
TseFI	GTSAC	1 cut(s)	1901
TseI	GCWGC	6 cut(s)	611, 873, 1424, 1535, 1789, 2072
Tsp45I	GTSAC	1 cut(s)	1901
TspGWI	ACGGA	2 cut(s)	1672, 1937
TspRI	CASTG	4 cut(s)	781, 904, 1101, 1873
Van91I	CCANNNNNTGG	3 cut(s)	248, 1514, 1601
Vha464I	CTTAAG	1 cut(s)	1195
VpaK11BI	GGWCC	8 cut(s)	218, 595, 759, 1129, 1370, 1517, 1553, 1739
XagI	CCTNNNNNAGG	2 cut(s)	142, 1488
XapI	RAATTY	4 cut(s)	229, 479, 545, 2079
XceI	RCATGY	3 cut(s)	313, 582, 1681
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1448
XhoI	CTCGAG	1 cut(s)	1851
XmaJI	CCTAGG	1 cut(s)	1183
XmiI	GTMKAC	2 cut(s)	133, 912
XmnI	GAANNNNTTC	3 cut(s)	829, 847, 1046
XspI	CTAG	4 cut(s)	591, 630, 1184, 2052
ZrmI	AGTACT	1 cut(s)	1885
Zsp2I	ATGCAT	1 cut(s)	1752

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.