Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6B

Orthogroup ID

OG0011764

Physical Location & Seq

Genomic Coordinates Forward (+)

70249804 .. 70254113

Gene Structure 4310 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6BG503500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2124 bp

ATGAAGAGAGGAGGCAGAGATGATGAAAAGGTTATGGGGCCTATGTTCCCAAGACTCCATGTGAATGATGCAGCAGATAAAGGAGGGCCAAGAGCACCTCCAAGGAACAAGATGGCCCTGTATGAACAGCTTAGTATACCCTCTCAGAGGTTCAACCATGGGGTTATGCCACTCAATCAAAACAGTATGGGATCCCCAGCTTTCTCCAATCAGGGGAATGGTCCTGAAAGAAATTTGCCTTTACCAATTCATGGTCGTCCATCTACACCTACTCATCACTCTCGCCAGTCTGATGGAGTAAATGTGAACATGCCCTCAGTACAACCTCGGCAAAGAAAGAGGGCAGGAGATGAAGATGATTTTACGGTTCCTGTATTTGTTCAATCAAGGATGGGTCAATGTCAGAGTAGAACTCAAAATGGTGGTGGTAAGGCAAAACTTACTCCCTTCAGCCAGTCTCATTCTGACTGTGCAATAAAATTCAAAAGTGCATCCAAGAAGGATAATAAACAAAGTAGCTCCCCCAGTCTCAATTTAAGACGAGAATTTAGAAGTGAGACAGAAGAGGATCTCAACGCATGTAGCTCAGCTAGGGACCATTCAGTAGAAGCTGCCACAAATATCTCAACTAGAGAAATGGTTGATGTTCCTGTAAATGTGAATACTTCTCCAAATAAAGAGTATGAAGACCATCCTGTTCCTACTTTCAACAGGTCTTGTGATAGTGATGCTTGCTTACAACAAAACTCTAGATCTGGGTCCCAACTAAACAACACTGAACAAGATGATAGTCTCCTTGAGTCCACAAGGGATGTAGAGAAGGGAACTGTTTCACAGGCAAGAAGTGTTTCTCGTTACGGGGGGAATCATAGCAGCCCCAACGAGCCTGATAATGACAGTGAATACCATGTAGACAGAATGTGTATTTCAGCACAAATGGGAAATGCAGACAAAGGTGATGATGTCTCAGAGACCTCCATGGTGGATTCTATATCAGGCATGGACATCTCTCCTGATGATGTAGTAGGAATAATAGGTCAGAAGCATTTCTGGAAGGCAAGAAAGGCAATTGTCAATCAGCAAAGATTGTTTGCAGTGCAAGTATTTGAGTTGCATAGACTCATTAAGGTCCAACGACTGATTGCTGGATCTCCACATCTTTTGCTTGAAGATACTGCTTTCCTAGGCACATCCTTAAGGGGTTCTCCTGCAAAGAAACTCCCGGCAGAGTATGTTGTAAAGCCACTACTACTAAAGCGCAAGCATGAGTCTGAGAAGTCAAATAACAAAATGGAATGTTCTGCTGAAAATGCGGTTGGGAAAGCTTCTCTTTCTTCTGTGAAAAATGGTAGCCAGCCTTCACATTATGGACCATATGTAGGGAGTCCACCTCCTCCAGCACCTGTGCCTGCTGACAATAAAGCAGCTCCTTGGTGCTTCCATCAACCACCTGGGCATCAGTATTTAATTCCTGTTATGTCTCCTTCTGAAGGACTCATATACAAGCCATATAATGGACCTGGATTTGTGGGAGCAGCTTGTGGAGGATGTGGACCTTTTGGCTCAAGTTCCATGCCGGGTAACTTCATTAAGCCAGCATATGGGGTTCCGGGATCTCATCATCAAGGAATGGGGGTTCTCCCTGTCCCTCATCCTACTTACTTTCCTCCCTATGGCATGTCCGTCATGAATCCCACCATGTCAAGCTCAGCTGTTGAACAAATGAATTGGTTTGCTGGACCTGGTATGCATGGATCAACTGATCAGTTGTCAGGAAACTCTAATTTGCAGCATCAAAGCTCATGTAATATGCCAACACCCAAAAATGGAGCTATTCCTCATGCCATGAAGTCTCGAGCATCAAACCCCAGTGAGTTACAAGGAAGTACTGGTAATAGTCCCGGTGACAGAGCACCAGTTGCGACGGATCAAAATGCTGATGAAAGTGATGCACTTCAACTTTTCCCTTCTGTTCCAGCAGTTCCAGAGCGAGTTCCCCAACCTCATGATACAAACCAGGCAACACGAGTGATAAGAGTTGTCCCGCACAATCCTAGATCTGCTACTGCATCAGCTGCTCGAATTTTCCAATCTATACAAGAAGAGAGAAAACAGTATGACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000902 GO:0001101 GO:0003006 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006950 GO:0007154 GO:0007165 GO:0007275 GO:0007602 GO:0007623 GO:0008150 GO:0009266 GO:0009314 GO:0009409 GO:0009416 GO:0009581 GO:0009582 GO:0009583 GO:0009585 GO:0009605 GO:0009628 GO:0009639 GO:0009648 GO:0009653 GO:0009719 GO:0009725 GO:0009733 GO:0009737 GO:0009791 GO:0009826 GO:0009889 GO:0009909 GO:0009987 GO:0010017 GO:0010031 GO:0010033 GO:0010119 GO:0010228 GO:0010468 GO:0010556 GO:0016043 GO:0016049 GO:0019219 GO:0019222 GO:0022414 GO:0023052 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032989 GO:0033993 GO:0040007 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048511 GO:0048573 GO:0048580 GO:0048589 GO:0048608 GO:0048731 GO:0048831 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0050879 GO:0050896 GO:0051171 GO:0051239 GO:0051252 GO:0051606 GO:0051716 GO:0060255 GO:0060560 GO:0061458 GO:0065007 GO:0071214 GO:0071478 GO:0071482 GO:0071489 GO:0071840 GO:0080090 GO:0097305 GO:0104004 GO:0140110 GO:1901700 GO:1903506 GO:2000026 GO:2000112 GO:2000241 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04712 map04712

Pfam Domains

Protein Families

No domains found.

Protein Analysis

707

Amino Acids

76.65

Weight (kDa)

8.19

Isoelectric Point (pI)

62.87

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011764)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G25930
fragaria_vesca	FvH4_2g32300 FvH4_2g32300
malus_domestica	MD08G1074100.v1.1 MD08G1074200.v1.1 MD15G1062000.v1.1
prunus_persica	Prupe.1G416000_v2.0.a1
pyrus_communis	pycom08g06130 pycom15g05860
rosa_chinensis	RchiOBHm_Chr6g0310391
rosa_laevigata	RLG00000010486
rosa_multiflora	Rmu_sc0027652.1_g000001
rosa_roxburghii	Rroxscaffold_7G00158570
rosa_rugosa	Rorug06G0379800
rosa_samantha	Rh6AG493800 Rh6BG503500 Rh6CG508700 Rh6DG494600
rosa_wichuraiana	Rw6G042970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	3 cut(s)	251, 1514, 1601
AccI	GTMKAC	2 cut(s)	136, 912
AciI	CCGC	2 cut(s)	1313, 2045
AclWI	GGATC	7 cut(s)	186, 199, 576, 1156, 1621, 1762, 1935
AcsI	RAATTY	4 cut(s)	232, 479, 545, 2082
AcuI	CTGAAG	2 cut(s)	433, 1509
AfaI	GTAC	2 cut(s)	321, 1888
AfiI	CCNNNNNNNGG	9 cut(s)	147, 213, 251, 1379, 1490, 1514, 1601, 1673, 1826
AflII	CTTAAG	1 cut(s)	1195
AgsI	TTSAA	7 cut(s)	154, 383, 484, 709, 1169, 1718, 1958
AjnI	CCWGG	4 cut(s)	1450, 1519, 1741, 2016
AjuI	GAANNNNNNNTTGG	2 cut(s)	1299, 1331
AloI	GAACNNNNNNTCC	2 cut(s)	1620, 1652
Alw21I	GWGCWC	2 cut(s)	97, 1915
Alw26I	GTCTC	8 cut(s)	462, 533, 551, 797, 965, 970, 1485, 1857
AlwI	GGATC	7 cut(s)	186, 199, 576, 1156, 1621, 1762, 1935
AlwNI	CAGNNNCTG	1 cut(s)	1403
Ama87I	CYCGRG	1 cut(s)	1854
AoxI	GGCC	3 cut(s)	38, 86, 114
ApeKI	GCWGC	7 cut(s)	71, 611, 873, 1424, 1535, 1789, 2075
ApoI	RAATTY	4 cut(s)	232, 479, 545, 2082
Asp700I	GAANNNNTTC	3 cut(s)	829, 847, 1046
AspA2I	CCTAGG	1 cut(s)	1183
AspLEI	GCGC	1 cut(s)	1260
AsuC2I	CCSGG	4 cut(s)	1223, 1578, 1611, 1902
AsuHPI	GGTGA	2 cut(s)	968, 1916
AvaI	CYCGRG	1 cut(s)	1854
AvaII	GGWCC	8 cut(s)	221, 595, 759, 1129, 1370, 1517, 1553, 1739
AvrII	CCTAGG	1 cut(s)	1183
BamHI	GGATCC	1 cut(s)	191
BarI	GAAGNNNNNNTAC	2 cut(s)	1342, 1374
BauI	CACGAG	1 cut(s)	2025
BbsI	GAAGAC	1 cut(s)	693
Bbv12I	GWGCWC	2 cut(s)	97, 1915
BbvI	GCAGC	7 cut(s)	83, 598, 885, 1436, 1547, 1801, 2062
BccI	CCATC	6 cut(s)	106, 268, 287, 385, 699, 1449
BciT130I	CCWGG	4 cut(s)	1452, 1521, 1743, 2018
BclI	TGATCA	1 cut(s)	1762
BcnI	CCSGG	4 cut(s)	1223, 1578, 1611, 1902
BcoDI	GTCTC	8 cut(s)	462, 533, 551, 797, 965, 970, 1485, 1857
BfaI	CTAG	5 cut(s)	591, 630, 750, 1184, 2055
BfrI	CTTAAG	1 cut(s)	1195
BglII	AGATCT	2 cut(s)	752, 2057
BisI	GCNGC	7 cut(s)	72, 612, 874, 1425, 1536, 1790, 2076
BlnI	CCTAGG	1 cut(s)	1183
BlpI	GCTNAGC	2 cut(s)	586, 1708
BlsI	GCNGC	7 cut(s)	73, 613, 875, 1426, 1537, 1791, 2077
BmcAI	AGTACT	1 cut(s)	1888
Bme1390I	CCNGG	8 cut(s)	1223, 1452, 1521, 1578, 1611, 1743, 1902, 2018
Bme18I	GGWCC	8 cut(s)	221, 595, 759, 1129, 1370, 1517, 1553, 1739
BmeT110I	CYCGRG	1 cut(s)	1854
BmiI	GGNNCC	7 cut(s)	39, 193, 369, 596, 760, 761, 1608
BmrFI	CCNGG	8 cut(s)	1223, 1452, 1521, 1578, 1611, 1743, 1902, 2018
BmrI	ACTGGG	2 cut(s)	519, 1863
BmsI	GCATC	8 cut(s)	58, 500, 718, 1465, 1801, 1868, 1939, 2078
BmuI	ACTGGG	2 cut(s)	519, 1863
BpiI	GAAGAC	1 cut(s)	693
BplI	GAGNNNNNCTC	4 cut(s)	397, 429, 1375, 1407
BpmI	CTGGAG	1 cut(s)	1380
Bpu1102I	GCTNAGC	2 cut(s)	586, 1708
BpuEI	CTTGAG	2 cut(s)	818, 1549
BpuMI	CCSGG	4 cut(s)	1223, 1578, 1611, 1902
BsaI	GGTCTC	1 cut(s)	965
BsaJI	CCNNGG	7 cut(s)	101, 157, 326, 978, 1183, 1430, 1451
BsaXI	ACNNNNNCTCC	2 cut(s)	288, 318
Bsc4I	CCNNNNNNNGG	9 cut(s)	147, 213, 251, 1379, 1490, 1514, 1601, 1673, 1826
Bse1I	ACTGG	6 cut(s)	286, 454, 525, 1869, 1894, 1916
BseBI	CCWGG	4 cut(s)	1452, 1521, 1743, 2018
BseDI	CCNNGG	7 cut(s)	101, 157, 326, 978, 1183, 1430, 1451
BseGI	GGATG	7 cut(s)	396, 491, 691, 817, 1190, 1553, 1651
BseLI	CCNNNNNNNGG	9 cut(s)	147, 213, 251, 1379, 1490, 1514, 1601, 1673, 1826
BseMII	CTCAG	6 cut(s)	158, 330, 600, 981, 1263, 1722
BseNI	ACTGG	6 cut(s)	286, 454, 525, 1869, 1894, 1916
BseRI	GAGGAG	2 cut(s)	24, 1383
BseXI	GCAGC	7 cut(s)	83, 598, 885, 1436, 1547, 1801, 2062
BseYI	CCCAGC	1 cut(s)	196
BshFI	GGCC	3 cut(s)	40, 88, 116
BsiHKAI	GWGCWC	2 cut(s)	97, 1915
BsiHKCI	CYCGRG	1 cut(s)	1854
BsiSI	CCGG	4 cut(s)	1223, 1577, 1610, 1902
BslFI	GGGAC	5 cut(s)	608, 745, 1631, 1884, 2027
BslI	CCNNNNNNNGG	9 cut(s)	147, 213, 251, 1379, 1490, 1514, 1601, 1673, 1826
BsmAI	GTCTC	8 cut(s)	462, 533, 551, 797, 965, 970, 1485, 1857
BsmFI	GGGAC	5 cut(s)	608, 745, 1631, 1884, 2027
BsnI	GGCC	3 cut(s)	40, 88, 116
Bso31I	GGTCTC	1 cut(s)	965
BsoBI	CYCGRG	1 cut(s)	1854
Bsp1286I	GDGCHC	2 cut(s)	97, 1915
Bsp143I	GATC	9 cut(s)	191, 568, 752, 1148, 1613, 1754, 1762, 1927, 2057
Bsp1720I	GCTNAGC	2 cut(s)	586, 1708
Bsp19I	CCATGG	2 cut(s)	157, 978
BspACI	CCGC	2 cut(s)	1313, 2045
BspANI	GGCC	3 cut(s)	40, 88, 116
BspCNI	CTCAG	6 cut(s)	157, 329, 599, 980, 1264, 1721
BspHI	TCATGA	2 cut(s)	1686, 2005
BspLI	GGNNCC	7 cut(s)	39, 193, 369, 596, 760, 761, 1608
BspPI	GGATC	7 cut(s)	186, 199, 576, 1156, 1621, 1762, 1935
BspTI	CTTAAG	1 cut(s)	1195
BspTNI	GGTCTC	1 cut(s)	965
BsrI	ACTGG	6 cut(s)	286, 454, 525, 1869, 1894, 1916
BssECI	CCNNGG	7 cut(s)	101, 157, 326, 978, 1183, 1430, 1451
BssMI	GATC	9 cut(s)	191, 568, 752, 1148, 1613, 1754, 1762, 1927, 2057
BssNAI	GTATAC	1 cut(s)	137
BssSI	CACGAG	1 cut(s)	2025
BssT1I	CCWWGG	5 cut(s)	101, 157, 978, 1183, 1430
Bst1107I	GTATAC	1 cut(s)	137
Bst2BI	CACGAG	1 cut(s)	2025
Bst2UI	CCWGG	4 cut(s)	1452, 1521, 1743, 2018
Bst4CI	ACNGT	6 cut(s)	185, 367, 470, 829, 899, 2115
Bst6I	CTCTTC	2 cut(s)	558, 2097
BstAFI	CTTAAG	1 cut(s)	1195
BstAPI	GCANNNNNTGC	2 cut(s)	1919, 2075
BstC8I	GCNNGC	5 cut(s)	733, 1262, 1355, 1410, 1596
BstDEI	CTNAG	7 cut(s)	131, 144, 316, 586, 967, 1272, 1708
BstDSI	CCRYGG	2 cut(s)	157, 978
BstENI	CCTNNNNNAGG	2 cut(s)	145, 1488
BstF5I	GGATG	7 cut(s)	396, 491, 691, 817, 1190, 1553, 1651
BstHHI	GCGC	1 cut(s)	1260
BstKTI	GATC	9 cut(s)	194, 571, 755, 1151, 1616, 1757, 1765, 1930, 2060
BstMAI	GTCTC	8 cut(s)	462, 533, 551, 797, 965, 970, 1485, 1857
BstMBI	GATC	9 cut(s)	191, 568, 752, 1148, 1613, 1754, 1762, 1927, 2057
BstMWI	GCNNNNNNNGC	4 cut(s)	1064, 1310, 1919, 2075
BstNI	CCWGG	4 cut(s)	1452, 1521, 1743, 2018
BstNSI	RCATGY	3 cut(s)	313, 582, 1681
BstSCI	CCNGG	8 cut(s)	1221, 1450, 1519, 1576, 1609, 1741, 1900, 2016
BstV1I	GCAGC	7 cut(s)	83, 598, 885, 1436, 1547, 1801, 2062
BstV2I	GAAGAC	1 cut(s)	693
BstX2I	RGATCY	6 cut(s)	191, 568, 752, 1148, 1613, 2057
BstXI	CCANNNNNNTGG	1 cut(s)	293
BstYI	RGATCY	6 cut(s)	191, 568, 752, 1148, 1613, 2057
BstZ17I	GTATAC	1 cut(s)	137
BsuRI	GGCC	3 cut(s)	40, 88, 116
BtgI	CCRYGG	2 cut(s)	157, 978
BtsCI	GGATG	7 cut(s)	396, 491, 691, 817, 1190, 1553, 1651
BtsI	GCAGTG	1 cut(s)	1101
BtsIMutI	CAGTG	4 cut(s)	774, 904, 1101, 1876
Cac8I	GCNNGC	5 cut(s)	733, 1262, 1355, 1410, 1596
CaiI	CAGNNNCTG	1 cut(s)	1403
CciI	TCATGA	2 cut(s)	1686, 2005
CfoI	GCGC	1 cut(s)	1260
CsiI	ACCWGGT	1 cut(s)	1741
Csp6I	GTAC	2 cut(s)	320, 1887
CspCI	CAANNNNNGTGG	2 cut(s)	1143, 1178
CviQI	GTAC	2 cut(s)	320, 1887
DdeI	CTNAG	7 cut(s)	131, 144, 316, 586, 967, 1272, 1708
DpnI	GATC	9 cut(s)	193, 570, 754, 1150, 1615, 1756, 1764, 1929, 2059
DpnII	GATC	9 cut(s)	191, 568, 752, 1148, 1613, 1754, 1762, 1927, 2057
Eam1104I	CTCTTC	2 cut(s)	558, 2097
EarI	CTCTTC	2 cut(s)	558, 2097
Eco130I	CCWWGG	5 cut(s)	101, 157, 978, 1183, 1430
Eco31I	GGTCTC	1 cut(s)	965
Eco47I	GGWCC	8 cut(s)	221, 595, 759, 1129, 1370, 1517, 1553, 1739
Eco57I	CTGAAG	2 cut(s)	433, 1509
Eco88I	CYCGRG	1 cut(s)	1854
EcoNI	CCTNNNNNAGG	2 cut(s)	145, 1488
EcoO109I	RGGNCCY	2 cut(s)	38, 759
EcoRII	CCWGG	4 cut(s)	1450, 1519, 1741, 2016
EcoT14I	CCWWGG	5 cut(s)	101, 157, 978, 1183, 1430
EcoT22I	ATGCAT	1 cut(s)	1752
ErhI	CCWWGG	5 cut(s)	101, 157, 978, 1183, 1430
FalI	AAGNNNNNCTT	2 cut(s)	1314, 1346
FaqI	GGGAC	5 cut(s)	608, 745, 1631, 1884, 2027
FauI	CCCGC	1 cut(s)	2052
FauNDI	CATATG	2 cut(s)	1375, 1600
FbaI	TGATCA	1 cut(s)	1762
FblI	GTMKAC	2 cut(s)	136, 912
Fnu4HI	GCNGC	7 cut(s)	72, 612, 874, 1425, 1536, 1790, 2076
FokI	GGATG	7 cut(s)	403, 478, 678, 824, 1177, 1560, 1638
Fsp4HI	GCNGC	7 cut(s)	72, 612, 874, 1425, 1536, 1790, 2076
FspBI	CTAG	5 cut(s)	591, 630, 750, 1184, 2055
GlaI	GCGC	1 cut(s)	1259
GluI	GCNGC	7 cut(s)	72, 612, 874, 1425, 1536, 1790, 2076
GsaI	CCCAGC	1 cut(s)	200
GsuI	CTGGAG	1 cut(s)	1380
HaeIII	GGCC	3 cut(s)	40, 88, 116
HapII	CCGG	4 cut(s)	1223, 1577, 1610, 1902
HhaI	GCGC	1 cut(s)	1260
Hin6I	GCGC	1 cut(s)	1258
HinP1I	GCGC	1 cut(s)	1258
HindIII	AAGCTT	1 cut(s)	1323
HinfI	GANTC	9 cut(s)	54, 800, 865, 986, 1119, 1268, 1384, 1494, 1690
HpaII	CCGG	4 cut(s)	1223, 1577, 1610, 1902
HphI	GGTGA	2 cut(s)	968, 1916
Hpy166II	GTNNAC	6 cut(s)	137, 307, 804, 913, 1388, 1553
Hpy188I	TCNGA	8 cut(s)	147, 292, 405, 466, 970, 1041, 1273, 1489
Hpy188III	TCNNGA	9 cut(s)	224, 750, 1013, 1051, 1687, 1773, 1854, 1985, 2006
Hpy8I	GTNNAC	6 cut(s)	137, 307, 804, 913, 1388, 1553
Hpy99I	CGWCG	1 cut(s)	1927
HpyAV	CCTTC	8 cut(s)	457, 493, 814, 1048, 1368, 1484, 1494, 1977
HpyCH4III	ACNGT	6 cut(s)	185, 367, 470, 829, 899, 2115
HpyF10VI	GCNNNNNNNGC	4 cut(s)	1064, 1310, 1919, 2075
HpyF3I	CTNAG	7 cut(s)	131, 144, 316, 586, 967, 1272, 1708
HspAI	GCGC	1 cut(s)	1258
KflI	GGGWCCC	1 cut(s)	759
Ksp22I	TGATCA	1 cut(s)	1762
Kzo9I	GATC	9 cut(s)	191, 568, 752, 1148, 1613, 1754, 1762, 1927, 2057
LmnI	GCTCC	4 cut(s)	524, 1432, 1532, 1829
Lsp1109I	GCAGC	7 cut(s)	83, 598, 885, 1436, 1547, 1801, 2062
LweI	GCATC	8 cut(s)	58, 500, 718, 1465, 1801, 1868, 1939, 2078
MabI	ACCWGGT	1 cut(s)	1741
MaeI	CTAG	5 cut(s)	591, 630, 750, 1184, 2055
MaeIII	GTNAC	4 cut(s)	854, 1580, 1875, 1904
MalI	GATC	9 cut(s)	193, 570, 754, 1150, 1615, 1756, 1764, 1929, 2059
MboI	GATC	9 cut(s)	191, 568, 752, 1148, 1613, 1754, 1762, 1927, 2057
MboII	GAAGA	7 cut(s)	16, 365, 575, 698, 1181, 1326, 2114
MfeI	CAATTG	1 cut(s)	1068
MflI	RGATCY	6 cut(s)	191, 568, 752, 1148, 1613, 2057
MhlI	GDGCHC	2 cut(s)	97, 1915
MlyI	GAGTC	6 cut(s)	48, 809, 1113, 1277, 1393, 1488
MmeI	TCCRAC	1 cut(s)	1156
Mph1103I	ATGCAT	1 cut(s)	1752
MroXI	GAANNNNTTC	3 cut(s)	829, 847, 1046
MseI	TTAA	5 cut(s)	536, 1125, 1196, 1466, 1590
MslI	CAYNNNNRTG	1 cut(s)	63
MspA1I	CMGCKG	2 cut(s)	1712, 2075
MspCI	CTTAAG	1 cut(s)	1195
MspI	CCGG	4 cut(s)	1223, 1577, 1610, 1902
MspR9I	CCNGG	8 cut(s)	1223, 1452, 1521, 1578, 1611, 1743, 1902, 2018
MunI	CAATTG	1 cut(s)	1068
MvaI	CCWGG	4 cut(s)	1452, 1521, 1743, 2018
MwoI	GCNNNNNNNGC	4 cut(s)	1064, 1310, 1919, 2075
NciI	CCSGG	4 cut(s)	1223, 1578, 1611, 1902
NcoI	CCATGG	2 cut(s)	157, 978
NdeI	CATATG	2 cut(s)	1375, 1600
NdeII	GATC	9 cut(s)	191, 568, 752, 1148, 1613, 1754, 1762, 1927, 2057
NlaIV	GGNNCC	7 cut(s)	39, 193, 369, 596, 760, 761, 1608
NmeAIII	GCCGAG	1 cut(s)	307
NmuCI	GTSAC	1 cut(s)	1904
NsiI	ATGCAT	1 cut(s)	1752
NspI	RCATGY	3 cut(s)	313, 582, 1681
PaeR7I	CTCGAG	1 cut(s)	1854
PagI	TCATGA	2 cut(s)	1686, 2005
PdmI	GAANNNNTTC	3 cut(s)	829, 847, 1046
PfeI	GAWTC	3 cut(s)	865, 986, 1690
PflMI	CCANNNNNTGG	3 cut(s)	251, 1514, 1601
PfoI	TCCNGGA	1 cut(s)	1609
PkrI	GCNGC	7 cut(s)	73, 613, 875, 1426, 1537, 1791, 2077
PleI	GAGTC	6 cut(s)	48, 808, 1113, 1276, 1392, 1488
PpsI	GAGTC	6 cut(s)	48, 808, 1113, 1276, 1392, 1488
PpuMI	RGGWCCY	1 cut(s)	759
Psp5II	RGGWCCY	1 cut(s)	759
Psp6I	CCWGG	4 cut(s)	1450, 1519, 1741, 2016
PspFI	CCCAGC	1 cut(s)	196
PspGI	CCWGG	4 cut(s)	1450, 1519, 1741, 2016
PspN4I	GGNNCC	7 cut(s)	39, 193, 369, 596, 760, 761, 1608
PspPPI	RGGWCCY	1 cut(s)	759
PstNI	CAGNNNCTG	1 cut(s)	1403
PsuI	RGATCY	6 cut(s)	191, 568, 752, 1148, 1613, 2057
PvuII	CAGCTG	2 cut(s)	1712, 2075
RsaI	GTAC	2 cut(s)	321, 1888
RsaNI	GTAC	2 cut(s)	320, 1887
RseI	CAYNNNNRTG	1 cut(s)	63
SaqAI	TTAA	5 cut(s)	536, 1125, 1196, 1466, 1590
SatI	GCNGC	7 cut(s)	72, 612, 874, 1425, 1536, 1790, 2076
Sau3AI	GATC	9 cut(s)	191, 568, 752, 1148, 1613, 1754, 1762, 1927, 2057
ScaI	AGTACT	1 cut(s)	1888
SchI	GAGTC	6 cut(s)	48, 809, 1113, 1277, 1393, 1488
ScrFI	CCNGG	8 cut(s)	1223, 1452, 1521, 1578, 1611, 1743, 1902, 2018
SduI	GDGCHC	2 cut(s)	97, 1915
SexAI	ACCWGGT	1 cut(s)	1741
SfaNI	GCATC	8 cut(s)	58, 500, 718, 1465, 1801, 1868, 1939, 2078
Sfr274I	CTCGAG	1 cut(s)	1854
SinI	GGWCC	8 cut(s)	221, 595, 759, 1129, 1370, 1517, 1553, 1739
SlaI	CTCGAG	1 cut(s)	1854
SmiMI	CAYNNNNRTG	1 cut(s)	63
SmlI	CTYRAG	4 cut(s)	797, 1195, 1564, 1854
SmoI	CTYRAG	4 cut(s)	797, 1195, 1564, 1854
SsiI	CCGC	2 cut(s)	1313, 2045
SspMI	CTAG	5 cut(s)	591, 630, 750, 1184, 2055
StyD4I	CCNGG	8 cut(s)	1221, 1450, 1519, 1576, 1609, 1741, 1900, 2016
StyI	CCWWGG	5 cut(s)	101, 157, 978, 1183, 1430
TaaI	ACNGT	6 cut(s)	185, 367, 470, 829, 899, 2115
TaqI	TCGA	2 cut(s)	1855, 2080
TatI	WGTACW	2 cut(s)	319, 1886
TfiI	GAWTC	3 cut(s)	865, 986, 1690
Tru1I	TTAA	5 cut(s)	536, 1125, 1196, 1466, 1590
Tru9I	TTAA	5 cut(s)	536, 1125, 1196, 1466, 1590
TscAI	CASTG	4 cut(s)	781, 904, 1101, 1876
TseFI	GTSAC	1 cut(s)	1904
TseI	GCWGC	7 cut(s)	71, 611, 873, 1424, 1535, 1789, 2075
Tsp45I	GTSAC	1 cut(s)	1904
TspGWI	ACGGA	2 cut(s)	1672, 1940
TspRI	CASTG	4 cut(s)	781, 904, 1101, 1876
Van91I	CCANNNNNTGG	3 cut(s)	251, 1514, 1601
Vha464I	CTTAAG	1 cut(s)	1195
VpaK11BI	GGWCC	8 cut(s)	221, 595, 759, 1129, 1370, 1517, 1553, 1739
XagI	CCTNNNNNAGG	2 cut(s)	145, 1488
XapI	RAATTY	4 cut(s)	232, 479, 545, 2082
XbaI	TCTAGA	1 cut(s)	749
XceI	RCATGY	3 cut(s)	313, 582, 1681
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1448
XhoI	CTCGAG	1 cut(s)	1854
XmaJI	CCTAGG	1 cut(s)	1183
XmiI	GTMKAC	2 cut(s)	136, 912
XmnI	GAANNNNTTC	3 cut(s)	829, 847, 1046
XspI	CTAG	5 cut(s)	591, 630, 750, 1184, 2055
ZrmI	AGTACT	1 cut(s)	1888
Zsp2I	ATGCAT	1 cut(s)	1752

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.