Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr8

Orthogroup ID

OG0011764

Physical Location & Seq

Genomic Coordinates Reverse (-)

4696219 .. 4700255

Gene Structure 4037 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom08g06130.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2163 bp

ATGAAGAGAGGGAACGAGGAGAAGGTTATGGGGCCTATGTTTCCGAGGCTCCATGTGAATGATGCAGATAAAGGAGGACCAAGAGCTCCTCCAAGGAACAAGATGGCCCTCTATGAGCAGCTGAGCATCCCATCTCAGAGGTTCAATCCTGGAGTGCTGCCTCTTAATTCAAATAACCAGGGGAGTTGTTCGGATGGAAATTTGCCTTTTCCACTTCATGGTCATCCATCTACACCTACTCATCAGGCTGAGATGTTGCATGGTCGCCAGTCCGACCGAGCAAATGTGAACTTGCCCTTTGAACAAACCAACCAAACAAGGAAGATCGGAGATGAAGATGATTTTAGTGTTCCTGAGTTTGTTCAATCAAGGATGGGTCTTGGTCATAGTAAAACTCAAATTGTTAGTGACAAGGAAAAACTTACTCCCATCAGCTCACCTCAATCTGGCCATTTAGTAAAAGTAAAAAATGCGGCGAAGAAGGATCCAAAACAAATAAGCTCCCCAACTCTGAATTTAAGACGAGAAGTAAATGCATCACCAAATCAAGAGGATGCAGAATGTTCAGTTCCGAGATTCAACAGGTTAGCTGAGAGTGATGCTTGCTTACAACAAGAGTCCAGATCTGGATCACGGCCAAACGTCACTGGACAAGGTGATGGTCTTGTTGAGTCTTCAAGGGATGTAGAGAAGGGAACTGTTTCCAGGGAAAGAAGTGTTTCTTGTTCCAGGGCGGATCCTAGCAGTCCAAATGAGCCTGATAATGACAGTGAATACCGTGGAGACACAGCGTGTATTTCACCTCAAATGGGACATGTAGACAAAAGTGACGATGTCTCAGAGACCTCCATGGTGGATTCTATATCCGGCATGGACATCTCTCCTGATGACGTTGTAGGAATAATAGGCCAGAAACATTTCTGGACGGCAAGAAAAGCAATTGTCAAGGTTGTCCTTGGGACTACATTTTGTGGATCTTGGACTATATTTGACAATATAGTTGATATGGTGGTGGGCATGCTTCATATGATTTGTTGTGTATTGTGCAACTATGTTTTTGACCCGACTCCTCTTACTTTCTACAGTCAGCAAAGATTGTTTGCAGTTCAAGTATTTGAGTTGCATAGACTCATTAAGGTCCAGCGACTGATTGCTGGATCTCCACATCTTTTGCTTGAAGATACTGCTTTTCTGGGCACATCTACTTTAAGGGGCTCTCCGGCAAAAAAACTCTCATCGGAGTATGTTGTAAAGCCACTTTTACATGTTGTAAAGCGCAAACACGAGCCTGAGGAGCCAAACAACAAAATGGAATGTTCTGCGGAAAATGCAGTAGGGAAAACATCTCATTCTTCTGTGAGAAATGGTAGTCAGACTTCAAATAATGGGCCATATTTAGGAAACCCTCAGCCAACACCTGTGGCTACTGATAATAAAGCCAATCCTTGGTGTTTCCATCAATCACCTGGACATCAGTTGTTAATTCCGGTAATGTCACCCTCGGAAGGACTTGTATACAAGCCGTATAATGGACCAGGATATATGGGAGCAGTTTGTGGAGGATGCGGACCTTTCAGCTCAACTCCCATGGCGGGCAACTTTGTTAAGCCAACTTACGGGGTTCCATCTTCTCATCATCAAGGAATGGGGGTTCTTCCTGTCCCCCCCTCACTAGGTCACACTTACTTTCCTCCATATGGCATGTCTGTTATGAATCCAGCCATGTCGACCTTACCTGTTGAGCAAATGCATTGGTTTGCTGGACCTGGTTCACATGGTCACACCGATCAGTCATCGGGAGGGGGTACAAACTCCAATTTGCAGCATCAAAGCTCGTGCAACATGCCATCCCGGAAAAATGTCACTATTCCCCATGCCAAAAAGTTTCAGCCATCTACTGACAGTGGGTTACAAGGAAGTACTGCAAATAGTACAGGCGACAGAGCACCAGTGAGGACAAATCAAAATGCTGAAGGAAGCGATGCTCTCCAACTACTTCCTATGGTTCCGGTCATTCCAGACGGAGTTCCCCAATCTCACGATACAGACCAGCCAACGCGGGCGATAAAAGTTGTGCCCCACAATCCTAGAACTGCAACTGCATCAGCTGCTCGAATTTTCCAGTCCATACAAGCAGAGAGAAAGCAGCAGGATTCAACCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000902 GO:0001101 GO:0003006 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006950 GO:0007154 GO:0007165 GO:0007275 GO:0007602 GO:0007623 GO:0008150 GO:0009266 GO:0009314 GO:0009409 GO:0009416 GO:0009581 GO:0009582 GO:0009583 GO:0009585 GO:0009605 GO:0009628 GO:0009639 GO:0009648 GO:0009653 GO:0009719 GO:0009725 GO:0009733 GO:0009737 GO:0009791 GO:0009826 GO:0009889 GO:0009909 GO:0009987 GO:0010017 GO:0010031 GO:0010033 GO:0010119 GO:0010228 GO:0010468 GO:0010556 GO:0016043 GO:0016049 GO:0019219 GO:0019222 GO:0022414 GO:0023052 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032989 GO:0033993 GO:0040007 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048511 GO:0048573 GO:0048580 GO:0048589 GO:0048608 GO:0048731 GO:0048831 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0050879 GO:0050896 GO:0051171 GO:0051239 GO:0051252 GO:0051606 GO:0051716 GO:0060255 GO:0060560 GO:0061458 GO:0065007 GO:0071214 GO:0071478 GO:0071482 GO:0071489 GO:0071840 GO:0080090 GO:0097305 GO:0104004 GO:0140110 GO:1901700 GO:1903506 GO:2000026 GO:2000112 GO:2000241 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04712 map04712

Pfam Domains

Protein Families

No domains found.

Protein Analysis

721

Amino Acids

78.06

Weight (kDa)

7.37

Isoelectric Point (pI)

54.17

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011764)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G25930
fragaria_vesca	FvH4_2g32300 FvH4_2g32300
malus_domestica	MD08G1074100.v1.1 MD08G1074200.v1.1 MD15G1062000.v1.1
prunus_persica	Prupe.1G416000_v2.0.a1
pyrus_communis	pycom08g06130 pycom15g05860
rosa_chinensis	RchiOBHm_Chr6g0310391
rosa_laevigata	RLG00000010486
rosa_multiflora	Rmu_sc0027652.1_g000001
rosa_roxburghii	Rroxscaffold_7G00158570
rosa_rugosa	Rorug06G0379800
rosa_samantha	Rh6AG493800 Rh6BG503500 Rh6CG508700 Rh6DG494600
rosa_wichuraiana	Rw6G042970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	2 cut(s)	218, 1446
AccI	GTMKAC	3 cut(s)	819, 1515, 1727
AccII	CGCG	1 cut(s)	2059
AciI	CCGC	6 cut(s)	473, 734, 1322, 1566, 1592, 2059
AclWI	GGATC	7 cut(s)	479, 492, 637, 731, 744, 982, 1165
AcoI	YGGCCR	2 cut(s)	448, 635
AcsI	RAATTY	3 cut(s)	199, 514, 2115
AcuI	CTGAAG	1 cut(s)	1992
AdeI	CACNNNGTG	1 cut(s)	792
AfaI	GTAC	3 cut(s)	1807, 1921, 1933
AflIII	ACRYGT	2 cut(s)	814, 1264
AjnI	CCWGG	7 cut(s)	148, 177, 704, 728, 1465, 1534, 1765
AloI	GAACNNNNNNTCC	2 cut(s)	1635, 1667
AluBI	AGCT	8 cut(s)	86, 121, 435, 501, 590, 1578, 1833, 2108
AluI	AGCT	8 cut(s)	86, 121, 435, 501, 590, 1578, 1833, 2108
Alw21I	GWGCWC	2 cut(s)	88, 1948
Alw26I	GTCTC	3 cut(s)	777, 836, 841
AlwI	GGATC	7 cut(s)	479, 492, 637, 731, 744, 982, 1165
AlwNI	CAGNNNCTG	1 cut(s)	1147
AoxI	GGCC	6 cut(s)	32, 105, 448, 635, 907, 1388
ApeKI	GCWGC	5 cut(s)	118, 157, 1822, 2108, 2146
ApoI	RAATTY	3 cut(s)	199, 514, 2115
Asp700I	GAANNNNTTC	3 cut(s)	700, 718, 917
AspLEI	GCGC	1 cut(s)	1278
AspS9I	GGNCC	8 cut(s)	32, 77, 106, 1138, 1388, 1532, 1568, 1763
AsuC2I	CCSGG	1 cut(s)	1852
AsuHPI	GGTGA	6 cut(s)	429, 531, 668, 792, 1455, 1488
AvaII	GGWCC	5 cut(s)	77, 1138, 1532, 1568, 1763
AxyI	CCTNAGG	1 cut(s)	1290
BaeGI	GKGCMC	2 cut(s)	1199, 2079
BalI	TGGCCA	1 cut(s)	450
BamHI	GGATCC	2 cut(s)	484, 736
BanII	GRGCYC	2 cut(s)	88, 1217
BarI	GAAGNNNNNNTAC	2 cut(s)	1360, 1392
BauI	CACGAG	2 cut(s)	1283, 1834
BbsI	GAAGAC	1 cut(s)	666
Bbv12I	GWGCWC	2 cut(s)	88, 1948
BbvCI	CCTCAGC	1 cut(s)	1407
BbvI	GCAGC	5 cut(s)	130, 144, 1834, 2095, 2158
BceAI	ACGGC	3 cut(s)	650, 942, 1507
BciT130I	CCWGG	7 cut(s)	150, 179, 706, 730, 1467, 1536, 1767
BcnI	CCSGG	1 cut(s)	1852
BcoDI	GTCTC	3 cut(s)	777, 836, 841
BfaI	CTAG	4 cut(s)	741, 1673, 2088, 2161
BfmI	CTRYAG	1 cut(s)	1081
BglII	AGATCT	1 cut(s)	623
BisI	GCNGC	6 cut(s)	119, 158, 474, 1823, 2109, 2147
BlpI	GCTNAGC	1 cut(s)	122
BlsI	GCNGC	6 cut(s)	120, 159, 475, 1824, 2110, 2148
BmcAI	AGTACT	1 cut(s)	1921
Bme1390I	CCNGG	8 cut(s)	150, 179, 706, 730, 1467, 1536, 1767, 1852
Bme18I	GGWCC	5 cut(s)	77, 1138, 1532, 1568, 1763
BmgT120I	GGNCC	8 cut(s)	32, 77, 106, 1138, 1388, 1532, 1568, 1763
BmiI	GGNNCC	7 cut(s)	33, 50, 486, 738, 1296, 1623, 2007
BmrFI	CCNGG	8 cut(s)	150, 179, 706, 730, 1467, 1536, 1767, 1852
BmsI	GCATC	9 cut(s)	52, 135, 544, 545, 589, 1553, 1834, 1972, 2111
BpiI	GAAGAC	1 cut(s)	666
BpmI	CTGGAG	1 cut(s)	171
Bpu10I	CCTNAGC	1 cut(s)	1407
Bpu1102I	GCTNAGC	1 cut(s)	122
BpuMI	CCSGG	1 cut(s)	1852
BsaBI	GATNNNNATC	1 cut(s)	628
BsaI	GGTCTC	1 cut(s)	836
BsaWI	WCCGGW	2 cut(s)	1486, 2008
Bse1I	ACTGG	4 cut(s)	268, 652, 1949, 2122
Bse21I	CCTNAGG	1 cut(s)	1290
Bse8I	GATNNNNATC	1 cut(s)	628
BseBI	CCWGG	7 cut(s)	150, 179, 706, 730, 1467, 1536, 1767
BseGI	GGATG	8 cut(s)	126, 199, 223, 378, 559, 688, 1568, 1847
BseJI	GATNNNNATC	1 cut(s)	628
BseMII	CTCAG	8 cut(s)	113, 149, 240, 345, 582, 852, 1281, 1421
BseNI	ACTGG	4 cut(s)	268, 652, 1949, 2122
BseRI	GAGGAG	4 cut(s)	32, 78, 1059, 1307
BseSI	GKGCMC	2 cut(s)	1199, 2079
BseXI	GCAGC	5 cut(s)	130, 144, 1834, 2095, 2158
Bsh1236I	CGCG	1 cut(s)	2059
Bsh1285I	CGRYCG	1 cut(s)	277
BshFI	GGCC	6 cut(s)	34, 107, 450, 637, 909, 1390
BsiEI	CGRYCG	1 cut(s)	277
BsiHKAI	GWGCWC	2 cut(s)	88, 1948
BsiSI	CCGG	5 cut(s)	867, 1220, 1487, 1852, 2009
BslFI	GGGAC	3 cut(s)	825, 973, 1646
BsmAI	GTCTC	3 cut(s)	777, 836, 841
BsmFI	GGGAC	3 cut(s)	825, 973, 1646
BsnI	GGCC	6 cut(s)	34, 107, 450, 637, 909, 1390
Bso31I	GGTCTC	1 cut(s)	836
Bsp1286I	GDGCHC	5 cut(s)	88, 1199, 1217, 1948, 2079
Bsp143I	GATC	8 cut(s)	324, 484, 623, 629, 736, 974, 1157, 1786
Bsp1720I	GCTNAGC	1 cut(s)	122
Bsp19I	CCATGG	2 cut(s)	849, 1587
BspACI	CCGC	6 cut(s)	473, 734, 1322, 1566, 1592, 2059
BspANI	GGCC	6 cut(s)	34, 107, 450, 637, 909, 1390
BspCNI	CTCAG	8 cut(s)	114, 148, 241, 346, 583, 851, 1282, 1420
BspFNI	CGCG	1 cut(s)	2059
BspLI	GGNNCC	7 cut(s)	33, 50, 486, 738, 1296, 1623, 2007
BspPI	GGATC	7 cut(s)	479, 492, 637, 731, 744, 982, 1165
BspTNI	GGTCTC	1 cut(s)	836
BsrI	ACTGG	4 cut(s)	268, 652, 1949, 2122
BssMI	GATC	8 cut(s)	324, 484, 623, 629, 736, 974, 1157, 1786
BssNAI	GTATAC	1 cut(s)	1516
BssSI	CACGAG	2 cut(s)	1283, 1834
BssT1I	CCWWGG	5 cut(s)	92, 849, 955, 1445, 1587
Bst1107I	GTATAC	1 cut(s)	1516
Bst2BI	CACGAG	2 cut(s)	1283, 1834
Bst2UI	CCWGG	7 cut(s)	150, 179, 706, 730, 1467, 1536, 1767
Bst4CI	ACNGT	5 cut(s)	700, 770, 779, 1085, 1904
BstAPI	GCANNNNNTGC	1 cut(s)	2108
BstC8I	GCNNGC	4 cut(s)	604, 1019, 1594, 2061
BstDEI	CTNAG	8 cut(s)	122, 135, 249, 354, 591, 838, 1290, 1407
BstDSI	CCRYGG	3 cut(s)	778, 849, 1587
BstF5I	GGATG	8 cut(s)	126, 199, 223, 378, 559, 688, 1568, 1847
BstFNI	CGCG	1 cut(s)	2059
BstHHI	GCGC	1 cut(s)	1278
BstKTI	GATC	8 cut(s)	327, 487, 626, 632, 739, 977, 1160, 1789
BstMAI	GTCTC	3 cut(s)	777, 836, 841
BstMBI	GATC	8 cut(s)	324, 484, 623, 629, 736, 974, 1157, 1786
BstMCI	CGRYCG	1 cut(s)	277
BstMWI	GCNNNNNNNGC	4 cut(s)	935, 1294, 1328, 2108
BstNI	CCWGG	7 cut(s)	150, 179, 706, 730, 1467, 1536, 1767
BstNSI	RCATGY	5 cut(s)	818, 1021, 1268, 1705, 1846
BstSCI	CCNGG	8 cut(s)	148, 177, 704, 728, 1465, 1534, 1765, 1850
BstSFI	CTRYAG	1 cut(s)	1081
BstSLI	GKGCMC	2 cut(s)	1199, 2079
BstUI	CGCG	1 cut(s)	2059
BstV1I	GCAGC	5 cut(s)	130, 144, 1834, 2095, 2158
BstV2I	GAAGAC	1 cut(s)	666
BstX2I	RGATCY	5 cut(s)	484, 623, 736, 974, 1157
BstYI	RGATCY	5 cut(s)	484, 623, 736, 974, 1157
BstZ17I	GTATAC	1 cut(s)	1516
Bsu36I	CCTNAGG	1 cut(s)	1290
BsuRI	GGCC	6 cut(s)	34, 107, 450, 637, 909, 1390
BtgI	CCRYGG	3 cut(s)	778, 849, 1587
BtgZI	GCGATG	1 cut(s)	1995
BtsCI	GGATG	8 cut(s)	126, 199, 223, 378, 559, 688, 1568, 1847
BtsIMutI	CAGTG	4 cut(s)	645, 775, 1909, 1956
Cac8I	GCNNGC	4 cut(s)	604, 1019, 1594, 2061
CaiI	CAGNNNCTG	1 cut(s)	1147
CfoI	GCGC	1 cut(s)	1278
Cfr13I	GGNCC	8 cut(s)	32, 77, 106, 1138, 1388, 1532, 1568, 1763
CsiI	ACCWGGT	1 cut(s)	1765
Csp6I	GTAC	3 cut(s)	1806, 1920, 1932
CspCI	CAANNNNNGTGG	4 cut(s)	1152, 1187, 1401, 1436
CviQI	GTAC	3 cut(s)	1806, 1920, 1932
DdeI	CTNAG	8 cut(s)	122, 135, 249, 354, 591, 838, 1290, 1407
DpnI	GATC	8 cut(s)	326, 486, 625, 631, 738, 976, 1159, 1788
DpnII	GATC	8 cut(s)	324, 484, 623, 629, 736, 974, 1157, 1786
DraIII	CACNNNGTG	1 cut(s)	792
EaeI	YGGCCR	2 cut(s)	448, 635
EciI	GGCGGA	1 cut(s)	749
Ecl136II	GAGCTC	1 cut(s)	86
Eco130I	CCWWGG	5 cut(s)	92, 849, 955, 1445, 1587
Eco24I	GRGCYC	2 cut(s)	88, 1217
Eco31I	GGTCTC	1 cut(s)	836
Eco47I	GGWCC	5 cut(s)	77, 1138, 1532, 1568, 1763
Eco53kI	GAGCTC	1 cut(s)	86
Eco57I	CTGAAG	1 cut(s)	1992
Eco81I	CCTNAGG	1 cut(s)	1290
EcoICRI	GAGCTC	1 cut(s)	86
EcoO109I	RGGNCCY	1 cut(s)	32
EcoRII	CCWGG	7 cut(s)	148, 177, 704, 728, 1465, 1534, 1765
EcoT14I	CCWWGG	5 cut(s)	92, 849, 955, 1445, 1587
EcoT22I	ATGCAT	2 cut(s)	538, 1752
EcoT38I	GRGCYC	2 cut(s)	88, 1217
ErhI	CCWWGG	5 cut(s)	92, 849, 955, 1445, 1587
FalI	AAGNNNNNCTT	2 cut(s)	706, 738
FaqI	GGGAC	3 cut(s)	825, 973, 1646
FauI	CCCGC	2 cut(s)	1585, 2052
FauNDI	CATATG	2 cut(s)	1026, 1696
FblI	GTMKAC	3 cut(s)	819, 1515, 1727
Fnu4HI	GCNGC	6 cut(s)	119, 158, 474, 1823, 2109, 2147
FokI	GGATG	8 cut(s)	113, 206, 210, 385, 566, 695, 1575, 1834
FriOI	GRGCYC	2 cut(s)	88, 1217
Fsp4HI	GCNGC	6 cut(s)	119, 158, 474, 1823, 2109, 2147
FspBI	CTAG	4 cut(s)	741, 1673, 2088, 2161
GlaI	GCGC	1 cut(s)	1277
GluI	GCNGC	6 cut(s)	119, 158, 474, 1823, 2109, 2147
GsuI	CTGGAG	1 cut(s)	171
HaeIII	GGCC	6 cut(s)	34, 107, 450, 637, 909, 1390
HapII	CCGG	5 cut(s)	867, 1220, 1487, 1852, 2009
HhaI	GCGC	1 cut(s)	1278
Hin6I	GCGC	1 cut(s)	1276
HinP1I	GCGC	1 cut(s)	1276
HincII	GTYRAC	1 cut(s)	1728
HindII	GTYRAC	1 cut(s)	1728
HinfI	GANTC	8 cut(s)	576, 617, 671, 857, 1066, 1128, 1714, 2153
HpaII	CCGG	5 cut(s)	867, 1220, 1487, 1852, 2009
HphI	GGTGA	6 cut(s)	429, 531, 668, 792, 1455, 1488
Hpy166II	GTNNAC	5 cut(s)	289, 820, 1516, 1728, 1772
Hpy188III	TCNNGA	9 cut(s)	353, 548, 621, 627, 884, 922, 1797, 2018, 2039
Hpy8I	GTNNAC	5 cut(s)	289, 820, 1516, 1728, 1772
HpyAV	CCTTC	5 cut(s)	16, 475, 685, 1499, 1967
HpyCH4III	ACNGT	5 cut(s)	700, 770, 779, 1085, 1904
HpyCH4IV	ACGT	2 cut(s)	642, 891
HpyF10VI	GCNNNNNNNGC	4 cut(s)	935, 1294, 1328, 2108
HpyF3I	CTNAG	8 cut(s)	122, 135, 249, 354, 591, 838, 1290, 1407
HpySE526I	ACGT	2 cut(s)	642, 891
HspAI	GCGC	1 cut(s)	1276
Kzo9I	GATC	8 cut(s)	324, 484, 623, 629, 736, 974, 1157, 1786
LmnI	GCTCC	5 cut(s)	54, 91, 506, 1294, 1547
Lsp1109I	GCAGC	5 cut(s)	130, 144, 1834, 2095, 2158
LweI	GCATC	9 cut(s)	52, 135, 544, 545, 589, 1553, 1834, 1972, 2111
MabI	ACCWGGT	1 cut(s)	1765
MaeI	CTAG	4 cut(s)	741, 1673, 2088, 2161
MaeII	ACGT	2 cut(s)	642, 891
MaeIII	GTNAC	8 cut(s)	407, 643, 827, 1494, 1676, 1778, 1861, 1908
MalI	GATC	8 cut(s)	326, 486, 625, 631, 738, 976, 1159, 1788
MboI	GATC	8 cut(s)	324, 484, 623, 629, 736, 974, 1157, 1786
MboII	GAAGA	9 cut(s)	16, 334, 347, 490, 666, 1190, 1344, 1620, 1646
MfeI	CAATTG	1 cut(s)	939
MflI	RGATCY	5 cut(s)	484, 623, 736, 974, 1157
MhlI	GDGCHC	5 cut(s)	88, 1199, 1217, 1948, 2079
MlsI	TGGCCA	1 cut(s)	450
MluCI	AATT	8 cut(s)	166, 199, 399, 514, 939, 1482, 1816, 2115
MluNI	TGGCCA	1 cut(s)	450
MlyI	GAGTC	4 cut(s)	626, 680, 1060, 1122
MmeI	TCCRAC	2 cut(s)	297, 2014
Mox20I	TGGCCA	1 cut(s)	450
Mph1103I	ATGCAT	2 cut(s)	538, 1752
MroXI	GAANNNNTTC	3 cut(s)	700, 718, 917
MscI	TGGCCA	1 cut(s)	450
MseI	TTAA	6 cut(s)	165, 518, 1134, 1208, 1481, 1605
MslI	CAYNNNNRTG	1 cut(s)	57
Msp20I	TGGCCA	1 cut(s)	450
MspA1I	CMGCKG	2 cut(s)	121, 2108
MspI	CCGG	5 cut(s)	867, 1220, 1487, 1852, 2009
MspR9I	CCNGG	8 cut(s)	150, 179, 706, 730, 1467, 1536, 1767, 1852
MunI	CAATTG	1 cut(s)	939
MvaI	CCWGG	7 cut(s)	150, 179, 706, 730, 1467, 1536, 1767
MvnI	CGCG	1 cut(s)	2059
MwoI	GCNNNNNNNGC	4 cut(s)	935, 1294, 1328, 2108
NciI	CCSGG	1 cut(s)	1852
NcoI	CCATGG	2 cut(s)	849, 1587
NdeI	CATATG	2 cut(s)	1026, 1696
NdeII	GATC	8 cut(s)	324, 484, 623, 629, 736, 974, 1157, 1786
NlaIV	GGNNCC	7 cut(s)	33, 50, 486, 738, 1296, 1623, 2007
NmuCI	GTSAC	7 cut(s)	407, 643, 827, 1494, 1676, 1778, 1861
NsiI	ATGCAT	2 cut(s)	538, 1752
NspI	RCATGY	5 cut(s)	818, 1021, 1268, 1705, 1846
PaeI	GCATGC	1 cut(s)	1021
PciI	ACATGT	2 cut(s)	814, 1264
PdmI	GAANNNNTTC	3 cut(s)	700, 718, 917
PfeI	GAWTC	4 cut(s)	576, 857, 1714, 2153
PflFI	GACNNNGTC	1 cut(s)	833
PflMI	CCANNNNNTGG	2 cut(s)	218, 1446
PfoI	TCCNGGA	2 cut(s)	148, 1850
PkrI	GCNGC	6 cut(s)	120, 159, 475, 1824, 2110, 2148
PleI	GAGTC	4 cut(s)	625, 679, 1060, 1122
PpsI	GAGTC	4 cut(s)	625, 679, 1060, 1122
PscI	ACATGT	2 cut(s)	814, 1264
Psp124BI	GAGCTC	1 cut(s)	88
Psp6I	CCWGG	7 cut(s)	148, 177, 704, 728, 1465, 1534, 1765
PspGI	CCWGG	7 cut(s)	148, 177, 704, 728, 1465, 1534, 1765
PspN4I	GGNNCC	7 cut(s)	33, 50, 486, 738, 1296, 1623, 2007
PspPI	GGNCC	8 cut(s)	32, 77, 106, 1138, 1388, 1532, 1568, 1763
PstNI	CAGNNNCTG	1 cut(s)	1147
PsuI	RGATCY	5 cut(s)	484, 623, 736, 974, 1157
PsyI	GACNNNGTC	1 cut(s)	833
PvuII	CAGCTG	2 cut(s)	121, 2108
RsaI	GTAC	3 cut(s)	1807, 1921, 1933
RsaNI	GTAC	3 cut(s)	1806, 1920, 1932
RseI	CAYNNNNRTG	1 cut(s)	57
SacI	GAGCTC	1 cut(s)	88
SalI	GTCGAC	1 cut(s)	1726
SaqAI	TTAA	6 cut(s)	165, 518, 1134, 1208, 1481, 1605
SatI	GCNGC	6 cut(s)	119, 158, 474, 1823, 2109, 2147
Sau3AI	GATC	8 cut(s)	324, 484, 623, 629, 736, 974, 1157, 1786
Sau96I	GGNCC	8 cut(s)	32, 77, 106, 1138, 1388, 1532, 1568, 1763
ScaI	AGTACT	1 cut(s)	1921
SchI	GAGTC	4 cut(s)	626, 680, 1060, 1122
ScrFI	CCNGG	8 cut(s)	150, 179, 706, 730, 1467, 1536, 1767, 1852
SduI	GDGCHC	5 cut(s)	88, 1199, 1217, 1948, 2079
SexAI	ACCWGGT	1 cut(s)	1765
SfaNI	GCATC	9 cut(s)	52, 135, 544, 545, 589, 1553, 1834, 1972, 2111
SfcI	CTRYAG	1 cut(s)	1081
SinI	GGWCC	5 cut(s)	77, 1138, 1532, 1568, 1763
SmiMI	CAYNNNNRTG	1 cut(s)	57
SphI	GCATGC	1 cut(s)	1021
Sse9I	AATT	8 cut(s)	166, 199, 399, 514, 939, 1482, 1816, 2115
SsiI	CCGC	6 cut(s)	473, 734, 1322, 1566, 1592, 2059
SspMI	CTAG	4 cut(s)	741, 1673, 2088, 2161
SstI	GAGCTC	1 cut(s)	88
StyD4I	CCNGG	8 cut(s)	148, 177, 704, 728, 1465, 1534, 1765, 1850
StyI	CCWWGG	5 cut(s)	92, 849, 955, 1445, 1587
TaaI	ACNGT	5 cut(s)	700, 770, 779, 1085, 1904
TaiI	ACGT	2 cut(s)	645, 894
TaqI	TCGA	2 cut(s)	1727, 2113
TaqII	GACCGA	1 cut(s)	291
TasI	AATT	8 cut(s)	166, 199, 399, 514, 939, 1482, 1816, 2115
TatI	WGTACW	2 cut(s)	1919, 1931
TauI	GCSGC	1 cut(s)	476
TfiI	GAWTC	4 cut(s)	576, 857, 1714, 2153
Tru1I	TTAA	6 cut(s)	165, 518, 1134, 1208, 1481, 1605
Tru9I	TTAA	6 cut(s)	165, 518, 1134, 1208, 1481, 1605
TscAI	CASTG	4 cut(s)	652, 775, 1909, 1956
TseFI	GTSAC	7 cut(s)	407, 643, 827, 1494, 1676, 1778, 1861
TseI	GCWGC	5 cut(s)	118, 157, 1822, 2108, 2146
Tsp45I	GTSAC	7 cut(s)	407, 643, 827, 1494, 1676, 1778, 1861
TspDTI	ATGAA	5 cut(s)	17, 206, 348, 1013, 1727
TspGWI	ACGGA	1 cut(s)	2037
TspRI	CASTG	4 cut(s)	652, 775, 1909, 1956
Tth111I	GACNNNGTC	1 cut(s)	833
Van91I	CCANNNNNTGG	2 cut(s)	218, 1446
VpaK11BI	GGWCC	5 cut(s)	77, 1138, 1532, 1568, 1763
XapI	RAATTY	3 cut(s)	199, 514, 2115
XceI	RCATGY	5 cut(s)	818, 1021, 1268, 1705, 1846
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1463
XmiI	GTMKAC	3 cut(s)	819, 1515, 1727
XmnI	GAANNNNTTC	3 cut(s)	700, 718, 917
XspI	CTAG	4 cut(s)	741, 1673, 2088, 2161
ZrmI	AGTACT	1 cut(s)	1921
Zsp2I	ATGCAT	2 cut(s)	538, 1752

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.