substituted 4 bases at 4 genomic stop codons
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G04860 |
| fragaria_vesca | FvH4_2g34460 |
| malus_domestica | MD15G1083200.v1.1 |
| prunus_persica | Prupe.1G435700_v2.0.a1 Prupe.1G435700_v2.0.a1 Prupe.1G435700_v2.0.a1 Prupe.1G435700_v2.0.a1 Prupe.1G435700_v2.0.a1 Prupe.1G435700_v2.0.a1 |
| pyrus_communis | pycom15g07770 |
| rosa_chinensis | RchiOBHm_Chr6g0307911 |
| rosa_laevigata | RLG00000010687 |
| rosa_multiflora | Rmu_sc0003252.1_g000018 Rmu_sc0032565.1_g000001 |
| rosa_roxburghii | Rroxscaffold_7G00160770 |
| rosa_rugosa | Rorug06G0361600 |
| rosa_samantha | Rh6AG470700 Rh6BG481700 Rh6CG487100 Rh6DG473200 |
| rosa_wichuraiana | Rw6G041100 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 1663 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 124 |
| AccI | GTMKAC | 1 cut(s) | 719 |
| AccII | CGCG | 1 cut(s) | 418 |
| AciI | CCGC | 3 cut(s) | 530, 1589, 1904 |
| AclWI | GGATC | 2 cut(s) | 704, 989 |
| AcsI | RAATTY | 2 cut(s) | 217, 1168 |
| AdeI | CACNNNGTG | 1 cut(s) | 1360 |
| AfaI | GTAC | 8 cut(s) | 131, 181, 301, 1094, 1191, 1307, 1397, 1597 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 124, 907, 1813 |
| AflII | CTTAAG | 1 cut(s) | 2026 |
| AflIII | ACRYGT | 1 cut(s) | 1392 |
| AgsI | TTSAA | 6 cut(s) | 80, 437, 445, 458, 1657, 2050 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1356, 1388 |
| AloI | GAACNNNNNNTCC | 6 cut(s) | 797, 829, 842, 874, 1596, 1628 |
| Alw26I | GTCTC | 4 cut(s) | 29, 372, 391, 1703 |
| AlwI | GGATC | 2 cut(s) | 704, 989 |
| Ama87I | CYCGRG | 3 cut(s) | 1096, 1483, 2032 |
| AoxI | GGCC | 2 cut(s) | 9, 1202 |
| ApeKI | GCWGC | 1 cut(s) | 934 |
| ApoI | RAATTY | 2 cut(s) | 217, 1168 |
| AseI | ATTAAT | 2 cut(s) | 779, 1733 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 660 |
| AsuHPI | GGTGA | 5 cut(s) | 688, 908, 922, 1828, 1948 |
| AvaI | CYCGRG | 3 cut(s) | 1096, 1483, 2032 |
| BanI | GGYRCC | 1 cut(s) | 1663 |
| BanII | GRGCYC | 1 cut(s) | 1764 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 172, 204 |
| BbsI | GAAGAC | 2 cut(s) | 180, 2016 |
| BbvCI | CCTCAGC | 1 cut(s) | 208 |
| BbvI | GCAGC | 1 cut(s) | 946 |
| BccI | CCATC | 4 cut(s) | 520, 1277, 1815, 1961 |
| BcoDI | GTCTC | 4 cut(s) | 29, 372, 391, 1703 |
| BfaI | CTAG | 5 cut(s) | 39, 1217, 1275, 1932, 2043 |
| BfrI | CTTAAG | 1 cut(s) | 2026 |
| BisI | GCNGC | 3 cut(s) | 531, 935, 1590 |
| BlsI | GCNGC | 3 cut(s) | 532, 936, 1591 |
| BmcAI | AGTACT | 1 cut(s) | 301 |
| BmeT110I | CYCGRG | 3 cut(s) | 1096, 1483, 2032 |
| BmiI | GGNNCC | 3 cut(s) | 510, 1665, 1761 |
| BmrI | ACTGGG | 1 cut(s) | 338 |
| BmsI | GCATC | 7 cut(s) | 748, 946, 984, 1201, 1249, 1452, 1812 |
| BmuI | ACTGGG | 1 cut(s) | 338 |
| BpiI | GAAGAC | 2 cut(s) | 180, 2016 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 289, 321 |
| Bpu10I | CCTNAGC | 1 cut(s) | 208 |
| BsaI | GGTCTC | 2 cut(s) | 29, 1703 |
| BsaJI | CCNNGG | 3 cut(s) | 681, 982, 999 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1596, 1626 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 124, 907, 1813 |
| Bse1I | ACTGG | 3 cut(s) | 118, 333, 748 |
| Bse3DI | GCAATG | 2 cut(s) | 633, 836 |
| BseDI | CCNNGG | 3 cut(s) | 681, 982, 999 |
| BseGI | GGATG | 6 cut(s) | 338, 975, 993, 1803, 1927, 1972 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 124, 907, 1813 |
| BseMI | GCAATG | 2 cut(s) | 633, 836 |
| BseMII | CTCAG | 6 cut(s) | 222, 857, 879, 1128, 1545, 1781 |
| BseNI | ACTGG | 3 cut(s) | 118, 333, 748 |
| BseRI | GAGGAG | 4 cut(s) | 193, 196, 563, 1739 |
| BseXI | GCAGC | 1 cut(s) | 946 |
| BsgI | GTGCAG | 1 cut(s) | 852 |
| Bsh1236I | CGCG | 1 cut(s) | 418 |
| BshFI | GGCC | 2 cut(s) | 11, 1204 |
| BshNI | GGYRCC | 1 cut(s) | 1663 |
| BsiHKCI | CYCGRG | 3 cut(s) | 1096, 1483, 2032 |
| BsiSI | CCGG | 1 cut(s) | 816 |
| BslFI | GGGAC | 1 cut(s) | 251 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 124, 907, 1813 |
| BsmAI | GTCTC | 4 cut(s) | 29, 372, 391, 1703 |
| BsmBI | CGTCTC | 1 cut(s) | 372 |
| BsmFI | GGGAC | 1 cut(s) | 251 |
| BsmI | GAATGC | 3 cut(s) | 400, 651, 2056 |
| BsnI | GGCC | 2 cut(s) | 11, 1204 |
| Bso31I | GGTCTC | 2 cut(s) | 29, 1703 |
| BsoBI | CYCGRG | 3 cut(s) | 1096, 1483, 2032 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1764 |
| Bsp1407I | TGTACA | 2 cut(s) | 1189, 1395 |
| Bsp143I | GATC | 3 cut(s) | 709, 994, 1479 |
| Bsp19I | CCATGG | 3 cut(s) | 681, 982, 999 |
| Bsp68I | TCGCGA | 1 cut(s) | 418 |
| BspACI | CCGC | 3 cut(s) | 530, 1589, 1904 |
| BspANI | GGCC | 2 cut(s) | 11, 1204 |
| BspCNI | CTCAG | 6 cut(s) | 221, 856, 880, 1129, 1544, 1782 |
| BspFNI | CGCG | 1 cut(s) | 418 |
| BspHI | TCATGA | 1 cut(s) | 1641 |
| BspLI | GGNNCC | 3 cut(s) | 510, 1665, 1761 |
| BspPI | GGATC | 2 cut(s) | 704, 989 |
| BspQI | GCTCTTC | 1 cut(s) | 312 |
| BspT107I | GGYRCC | 1 cut(s) | 1663 |
| BspTI | CTTAAG | 1 cut(s) | 2026 |
| BspTNI | GGTCTC | 2 cut(s) | 29, 1703 |
| BsrDI | GCAATG | 2 cut(s) | 633, 836 |
| BsrGI | TGTACA | 2 cut(s) | 1189, 1395 |
| BsrI | ACTGG | 3 cut(s) | 118, 333, 748 |
| BssECI | CCNNGG | 3 cut(s) | 681, 982, 999 |
| BssMI | GATC | 3 cut(s) | 709, 994, 1479 |
| BssT1I | CCWWGG | 3 cut(s) | 681, 982, 999 |
| Bst4CI | ACNGT | 4 cut(s) | 1253, 1455, 1653, 1862 |
| Bst6I | CTCTTC | 3 cut(s) | 19, 312, 557 |
| BstAFI | CTTAAG | 1 cut(s) | 2026 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 103, 632 |
| BstAUI | TGTACA | 2 cut(s) | 1189, 1395 |
| BstC8I | GCNNGC | 7 cut(s) | 99, 633, 1298, 1422, 1525, 1687, 1714 |
| BstDEI | CTNAG | 7 cut(s) | 208, 843, 888, 1137, 1343, 1531, 1790 |
| BstDSI | CCRYGG | 3 cut(s) | 681, 982, 999 |
| BstEII | GGTNACC | 2 cut(s) | 676, 896 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 905 |
| BstF5I | GGATG | 6 cut(s) | 338, 975, 993, 1803, 1927, 1972 |
| BstFNI | CGCG | 1 cut(s) | 418 |
| BstKTI | GATC | 3 cut(s) | 712, 997, 1482 |
| BstMAI | GTCTC | 4 cut(s) | 29, 372, 391, 1703 |
| BstMBI | GATC | 3 cut(s) | 709, 994, 1479 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 103, 632, 1028, 1672, 1778 |
| BstNSI | RCATGY | 2 cut(s) | 1396, 1424 |
| BstPI | GGTNACC | 2 cut(s) | 676, 896 |
| BstUI | CGCG | 1 cut(s) | 418 |
| BstV1I | GCAGC | 1 cut(s) | 946 |
| BstV2I | GAAGAC | 2 cut(s) | 180, 2016 |
| BstX2I | RGATCY | 1 cut(s) | 994 |
| BstYI | RGATCY | 1 cut(s) | 994 |
| BsuRI | GGCC | 2 cut(s) | 11, 1204 |
| BtgI | CCRYGG | 3 cut(s) | 681, 982, 999 |
| BtsCI | GGATG | 6 cut(s) | 338, 975, 993, 1803, 1927, 1972 |
| BtsI | GCAGTG | 2 cut(s) | 101, 1779 |
| BtsIMutI | CAGTG | 2 cut(s) | 101, 1779 |
| BtuMI | TCGCGA | 1 cut(s) | 418 |
| Cac8I | GCNNGC | 7 cut(s) | 99, 633, 1298, 1422, 1525, 1687, 1714 |
| CciI | TCATGA | 1 cut(s) | 1641 |
| CseI | GACGC | 1 cut(s) | 248 |
| Csp6I | GTAC | 8 cut(s) | 130, 180, 300, 1093, 1190, 1306, 1396, 1596 |
| CviQI | GTAC | 8 cut(s) | 130, 180, 300, 1093, 1190, 1306, 1396, 1596 |
| DdeI | CTNAG | 7 cut(s) | 208, 843, 888, 1137, 1343, 1531, 1790 |
| DpnI | GATC | 3 cut(s) | 711, 996, 1481 |
| DpnII | GATC | 3 cut(s) | 709, 994, 1479 |
| DraI | TTTAAA | 2 cut(s) | 216, 640 |
| DraIII | CACNNNGTG | 1 cut(s) | 1360 |
| Eam1104I | CTCTTC | 3 cut(s) | 19, 312, 557 |
| EarI | CTCTTC | 3 cut(s) | 19, 312, 557 |
| Eco130I | CCWWGG | 3 cut(s) | 681, 982, 999 |
| Eco24I | GRGCYC | 1 cut(s) | 1764 |
| Eco31I | GGTCTC | 2 cut(s) | 29, 1703 |
| Eco32I | GATATC | 1 cut(s) | 1179 |
| Eco88I | CYCGRG | 3 cut(s) | 1096, 1483, 2032 |
| Eco91I | GGTNACC | 2 cut(s) | 676, 896 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 905 |
| EcoO65I | GGTNACC | 2 cut(s) | 676, 896 |
| EcoRI | GAATTC | 1 cut(s) | 1168 |
| EcoRV | GATATC | 1 cut(s) | 1179 |
| EcoT14I | CCWWGG | 3 cut(s) | 681, 982, 999 |
| EcoT38I | GRGCYC | 1 cut(s) | 1764 |
| ErhI | CCWWGG | 3 cut(s) | 681, 982, 999 |
| Esp3I | CGTCTC | 1 cut(s) | 372 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 90, 122 |
| FaqI | GGGAC | 1 cut(s) | 251 |
| FblI | GTMKAC | 1 cut(s) | 719 |
| Fnu4HI | GCNGC | 3 cut(s) | 531, 935, 1590 |
| FokI | GGATG | 6 cut(s) | 345, 962, 1000, 1790, 1934, 1979 |
| FriOI | GRGCYC | 1 cut(s) | 1764 |
| Fsp4HI | GCNGC | 3 cut(s) | 531, 935, 1590 |
| FspBI | CTAG | 5 cut(s) | 39, 1217, 1275, 1932, 2043 |
| GluI | GCNGC | 3 cut(s) | 531, 935, 1590 |
| HaeIII | GGCC | 2 cut(s) | 11, 1204 |
| HapII | CCGG | 1 cut(s) | 816 |
| HgaI | GACGC | 1 cut(s) | 248 |
| HincII | GTYRAC | 1 cut(s) | 280 |
| HindII | GTYRAC | 1 cut(s) | 280 |
| HindIII | AAGCTT | 2 cut(s) | 950, 1820 |
| HinfI | GANTC | 6 cut(s) | 250, 285, 716, 812, 1061, 1875 |
| HpaII | CCGG | 1 cut(s) | 816 |
| HphI | GGTGA | 5 cut(s) | 688, 908, 922, 1828, 1948 |
| Hpy166II | GTNNAC | 4 cut(s) | 280, 720, 1190, 2023 |
| Hpy188I | TCNGA | 6 cut(s) | 249, 489, 846, 1138, 1534, 1745 |
| Hpy8I | GTNNAC | 4 cut(s) | 280, 720, 1190, 2023 |
| HpyAV | CCTTC | 3 cut(s) | 53, 701, 1194 |
| HpyCH4III | ACNGT | 4 cut(s) | 1253, 1455, 1653, 1862 |
| HpyCH4IV | ACGT | 1 cut(s) | 381 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 103, 632, 1028, 1672, 1778 |
| HpyF3I | CTNAG | 7 cut(s) | 208, 843, 888, 1137, 1343, 1531, 1790 |
| HpySE526I | ACGT | 1 cut(s) | 381 |
| Kzo9I | GATC | 3 cut(s) | 709, 994, 1479 |
| LguI | GCTCTTC | 1 cut(s) | 312 |
| LmnI | GCTCC | 2 cut(s) | 171, 1759 |
| Lsp1109I | GCAGC | 1 cut(s) | 946 |
| LweI | GCATC | 7 cut(s) | 748, 946, 984, 1201, 1249, 1452, 1812 |
| MaeI | CTAG | 5 cut(s) | 39, 1217, 1275, 1932, 2043 |
| MaeII | ACGT | 1 cut(s) | 381 |
| MaeIII | GTNAC | 3 cut(s) | 676, 896, 1862 |
| MalI | GATC | 3 cut(s) | 711, 996, 1481 |
| MboI | GATC | 3 cut(s) | 709, 994, 1479 |
| MflI | RGATCY | 1 cut(s) | 994 |
| MhlI | GDGCHC | 1 cut(s) | 1764 |
| MluCI | AATT | 6 cut(s) | 217, 768, 780, 1168, 1313, 1980 |
| MlyI | GAGTC | 1 cut(s) | 725 |
| MmeI | TCCRAC | 3 cut(s) | 105, 1145, 1354 |
| MroXI | GAANNNNTTC | 1 cut(s) | 660 |
| MslI | CAYNNNNRTG | 3 cut(s) | 293, 729, 1032 |
| MspCI | CTTAAG | 1 cut(s) | 2026 |
| MspI | CCGG | 1 cut(s) | 816 |
| Mva1269I | GAATGC | 3 cut(s) | 400, 651, 2056 |
| MvnI | CGCG | 1 cut(s) | 418 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 103, 632, 1028, 1672, 1778 |
| NcoI | CCATGG | 3 cut(s) | 681, 982, 999 |
| NdeII | GATC | 3 cut(s) | 709, 994, 1479 |
| NlaIV | GGNNCC | 3 cut(s) | 510, 1665, 1761 |
| NmuCI | GTSAC | 2 cut(s) | 676, 896 |
| NruI | TCGCGA | 1 cut(s) | 418 |
| NspI | RCATGY | 2 cut(s) | 1396, 1424 |
| PaeI | GCATGC | 1 cut(s) | 1424 |
| PaeR7I | CTCGAG | 2 cut(s) | 1096, 2032 |
| PagI | TCATGA | 1 cut(s) | 1641 |
| PciI | ACATGT | 1 cut(s) | 1392 |
| PciSI | GCTCTTC | 1 cut(s) | 312 |
| PctI | GAATGC | 3 cut(s) | 400, 651, 2056 |
| PdmI | GAANNNNTTC | 1 cut(s) | 660 |
| PfeI | GAWTC | 5 cut(s) | 250, 285, 812, 1061, 1875 |
| PflFI | GACNNNGTC | 2 cut(s) | 383, 1251 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 124 |
| PkrI | GCNGC | 3 cut(s) | 532, 936, 1591 |
| PleI | GAGTC | 1 cut(s) | 724 |
| PpsI | GAGTC | 1 cut(s) | 724 |
| PscI | ACATGT | 1 cut(s) | 1392 |
| PshBI | ATTAAT | 2 cut(s) | 779, 1733 |
| PspEI | GGTNACC | 2 cut(s) | 676, 896 |
| PspN4I | GGNNCC | 3 cut(s) | 510, 1665, 1761 |
| PspXI | VCTCGAGB | 2 cut(s) | 1096, 2032 |
| PsuI | RGATCY | 1 cut(s) | 994 |
| PsyI | GACNNNGTC | 2 cut(s) | 383, 1251 |
| RruI | TCGCGA | 1 cut(s) | 418 |
| RsaI | GTAC | 8 cut(s) | 131, 181, 301, 1094, 1191, 1307, 1397, 1597 |
| RsaNI | GTAC | 8 cut(s) | 130, 180, 300, 1093, 1190, 1306, 1396, 1596 |
| RseI | CAYNNNNRTG | 3 cut(s) | 293, 729, 1032 |
| SapI | GCTCTTC | 1 cut(s) | 312 |
| SatI | GCNGC | 3 cut(s) | 531, 935, 1590 |
| Sau3AI | GATC | 3 cut(s) | 709, 994, 1479 |
| ScaI | AGTACT | 1 cut(s) | 301 |
| SchI | GAGTC | 1 cut(s) | 725 |
| SduI | GDGCHC | 1 cut(s) | 1764 |
| SfaNI | GCATC | 7 cut(s) | 748, 946, 984, 1201, 1249, 1452, 1812 |
| Sfr274I | CTCGAG | 2 cut(s) | 1096, 2032 |
| SlaI | CTCGAG | 2 cut(s) | 1096, 2032 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 293, 729, 1032 |
| SmlI | CTYRAG | 3 cut(s) | 1096, 2026, 2032 |
| SmoI | CTYRAG | 3 cut(s) | 1096, 2026, 2032 |
| SphI | GCATGC | 1 cut(s) | 1424 |
| Sse9I | AATT | 6 cut(s) | 217, 768, 780, 1168, 1313, 1980 |
| SsiI | CCGC | 3 cut(s) | 530, 1589, 1904 |
| SspMI | CTAG | 5 cut(s) | 39, 1217, 1275, 1932, 2043 |
| StyI | CCWWGG | 3 cut(s) | 681, 982, 999 |
| TaaI | ACNGT | 4 cut(s) | 1253, 1455, 1653, 1862 |
| TaiI | ACGT | 1 cut(s) | 384 |
| TaqI | TCGA | 5 cut(s) | 91, 1097, 1446, 1722, 2033 |
| TaqII | GACCGA | 1 cut(s) | 297 |
| TasI | AATT | 6 cut(s) | 217, 768, 780, 1168, 1313, 1980 |
| TatI | WGTACW | 7 cut(s) | 129, 179, 299, 1092, 1189, 1395, 1595 |
| TauI | GCSGC | 2 cut(s) | 533, 1592 |
| TfiI | GAWTC | 5 cut(s) | 250, 285, 812, 1061, 1875 |
| TscAI | CASTG | 2 cut(s) | 108, 1779 |
| TseFI | GTSAC | 2 cut(s) | 676, 896 |
| TseI | GCWGC | 1 cut(s) | 934 |
| Tsp45I | GTSAC | 2 cut(s) | 676, 896 |
| TspGWI | ACGGA | 1 cut(s) | 211 |
| TspRI | CASTG | 2 cut(s) | 108, 1779 |
| Tth111I | GACNNNGTC | 2 cut(s) | 383, 1251 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 124 |
| Vha464I | CTTAAG | 1 cut(s) | 2026 |
| VspI | ATTAAT | 2 cut(s) | 779, 1733 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 905 |
| XapI | RAATTY | 2 cut(s) | 217, 1168 |
| XceI | RCATGY | 2 cut(s) | 1396, 1424 |
| XhoI | CTCGAG | 2 cut(s) | 1096, 2032 |
| XmiI | GTMKAC | 1 cut(s) | 719 |
| XmnI | GAANNNNTTC | 1 cut(s) | 660 |
| XspI | CTAG | 5 cut(s) | 39, 1217, 1275, 1932, 2043 |
| ZrmI | AGTACT | 1 cut(s) | 301 |