Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0032565.1

Orthogroup ID

OG0009824

Physical Location & Seq

Genomic Coordinates Forward (+)

954 .. 3059

Gene Structure 2106 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0032565.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2106 bp

atgaactgggcctgttctattggtctctctacaaagcctggccttgtctacttccactctcttctaaattctcacattcaaaccaaaaatccaaaacaagctttactcctttttcgccagttgtacaagcacaatgtgaaacccaatgatctcacttcctctttgctcctaaaagcttgcacatcttcttcctcatatttaaattcagttaatgctgaaatagaagcgaaccagattcatacccacttgataaaatcgggtgttgaccgattcgtatatgtgggtacagctcttcttgatctttacatgaaattggggcgtgtgagaaatgctcagaagctgttcgatgatatgcccgagagagatgatgtctcttggaatgcactgatttgtggggtttcaagaaacggtcgccatttcgaagcgttggaactctttgttcaaatgtgcagagaggggtttcgtcctcgtcatacgactttggttagtttggtaccgtcttgtggcaggcatgagttggcttttcaggggaaatctgttcatgggtttggaattaaggccggccttgattcggattcgcaagtgaagaatgctcttacttcgatgtatggtaaatgcgcagatttggaagcggcagaagtcttgtttgaagagattggtgacaggagtgtggtttcttggaatactatgatcggtgcttatggccaaaatggttgctttgacgaggcaatgcttgtgtttaaacgtatgcgagaggaggatgtgcaagccaatctggtgaccgtggtaagccttctgtcagcaaatggcgatccagagtctgctcattgtcatgccatcaagactggtcttgtaaataatgcttctgtgattacttcgctaatttgcgagtatgcaacgcgcggcgacacagaatctggagaactgctttacaagtcattgcctcagaagactttggtttccctaactgcactaatttctagttatgcggagagagataacatgggtcaggtgatggagtgttttgctcacttgctgcagttagacatgaaactagatgcagtggctatggttagcattctccatgggataaagcaccctgctgactttggccttggacttgctttccatggttacggattgaagacggggttgaccgctgattctttggccgtgaatgggttgataagcatgtactcaaggtttgacaatatagaggatgcgttttccttattctctgagatgcgtgaaaaaccattgattacttggaattctttgatatcgggctgtgttcaagctggaaggtcaagtgatgcgctggagttgctttctcagatgaaaatgtctggacatagtccagattccatttctatctctagtttactatctgggtgttgccaaattgagtacttgaaatttggggagggacttcatacatatgtactgagaaacaacttcgaaggagaagattttgttggaactgctcttatagacatgtacaccaagtgtggaagaatagaccgtgctgaaagggtgttcaagagtataaaagagccatgcttggcaacatggaactcaatgatctcaggttatagcttatacggtttagaacataaggctcttgtttgcttctccgaaatgcaagaacaaggactgaagcctgataaaataacttttttggcagtcttagccgcttgtactcatgggggtcttgttcatggaggaagaacatatttccaaatgatgaaggaaacgttcaacctgacaccaagtttgcaacactgtgcttgcatggtcaatctctatggtcgtgctggtctgttggacgacgcattgatgtttatcagggacatggaaatagagcctgatttcgcggtctggggagctctgctgaatgcttgttgcatccatcaggaggtgaaggttggggaatacatagccaaaaaattgttcttcttggacagtaaaaatgccggcttcctcgtgttgatgtcaaatctttacgcaatcaaaagaaggtgggaagatgtagcaagagtgagggagatgatgagagagaccggaggtgatggatgttcaggaattagtgtcattgagatgacttga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009507 GO:0009536 GO:0009987 GO:0010467 GO:0016070 GO:0016787 GO:0016788 GO:0031425 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1900865 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko00500 ko01100 ko04973 map00500 map01100 map04973

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

701

Amino Acids

77.64

Weight (kDa)

6.07

Isoelectric Point (pI)

35.62

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009824)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G04860
fragaria_vesca	FvH4_2g34460
malus_domestica	MD15G1083200.v1.1
prunus_persica	Prupe.1G435700_v2.0.a1 Prupe.1G435700_v2.0.a1 Prupe.1G435700_v2.0.a1 Prupe.1G435700_v2.0.a1 Prupe.1G435700_v2.0.a1 Prupe.1G435700_v2.0.a1
pyrus_communis	pycom15g07770
rosa_chinensis	RchiOBHm_Chr6g0307911
rosa_laevigata	RLG00000010687
rosa_multiflora	Rmu_sc0003252.1_g000018 Rmu_sc0032565.1_g000001
rosa_roxburghii	Rroxscaffold_7G00160770
rosa_rugosa	Rorug06G0361600
rosa_samantha	Rh6AG470700 Rh6BG481700 Rh6CG487100 Rh6DG473200
rosa_wichuraiana	Rw6G041100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	619
Acc65I	GGTACC	1 cut(s)	493
AccB1I	GGYRCC	1 cut(s)	493
AccI	GTMKAC	1 cut(s)	48
AccII	CGCG	3 cut(s)	901, 903, 1874
AciI	CCGC	6 cut(s)	632, 903, 989, 1158, 1692, 1874
AclI	AACGTT	1 cut(s)	1754
AclWI	GGATC	1 cut(s)	806
AcoI	YGGCCR	2 cut(s)	703, 1170
AcsI	RAATTY	4 cut(s)	67, 202, 1270, 1415
AcuI	CTGAAG	1 cut(s)	1676
AdeI	CACNNNGTG	2 cut(s)	136, 1506
AfaI	GTAC	8 cut(s)	125, 286, 495, 1196, 1409, 1443, 1499, 1699
AfiI	CCNNNNNNNGG	4 cut(s)	503, 571, 1179, 1915
AflIII	ACRYGT	1 cut(s)	1494
AgsI	TTSAA	9 cut(s)	80, 402, 443, 650, 1144, 1295, 1414, 1540, 1759
AjnI	CCWGG	1 cut(s)	37
AjuI	GAANNNNNNNTTGG	4 cut(s)	1458, 1490, 1934, 1966
AluBI	AGCT	7 cut(s)	101, 176, 290, 340, 1298, 1596, 1886
AluI	AGCT	7 cut(s)	101, 176, 290, 340, 1298, 1596, 1886
Alw21I	GWGCWC	1 cut(s)	1888
Alw26I	GTCTC	3 cut(s)	29, 376, 2051
AlwI	GGATC	1 cut(s)	806
AlwNI	CAGNNNCTG	3 cut(s)	340, 821, 917
Ama87I	CYCGRG	1 cut(s)	356
AoxI	GGCC	7 cut(s)	9, 40, 558, 562, 703, 1111, 1170
ApeKI	GCWGC	1 cut(s)	1036
ApoI	RAATTY	4 cut(s)	67, 202, 1270, 1415
ArsI	GACNNNNNNTTYG	2 cut(s)	1756, 1788
Asp700I	GAANNNNTTC	1 cut(s)	341
Asp718I	GGTACC	1 cut(s)	493
AspLEI	GCGC	3 cut(s)	620, 903, 1318
AspS9I	GGNCC	1 cut(s)	9
AsuHPI	GGTGA	5 cut(s)	671, 790, 1024, 1930, 2078
AsuII	TTCGAA	2 cut(s)	420, 1458
AvaI	CYCGRG	1 cut(s)	356
BalI	TGGCCA	1 cut(s)	705
BanI	GGYRCC	1 cut(s)	493
BanII	GRGCYC	1 cut(s)	1888
BauI	CACGAG	1 cut(s)	1982
BbsI	GAAGAC	2 cut(s)	956, 1151
Bbv12I	GWGCWC	1 cut(s)	1888
BbvI	GCAGC	1 cut(s)	1023
BccI	CCATC	4 cut(s)	845, 1009, 1917, 2063
BceAI	ACGGC	1 cut(s)	1157
BciT130I	CCWGG	1 cut(s)	39
BcoDI	GTCTC	3 cut(s)	29, 376, 2051
BfaI	CTAG	3 cut(s)	981, 1055, 1377
BfmI	CTRYAG	1 cut(s)	1037
BisI	GCNGC	4 cut(s)	633, 904, 1037, 1692
BlsI	GCNGC	4 cut(s)	634, 905, 1038, 1693
BmcAI	AGTACT	1 cut(s)	1409
Bme1390I	CCNGG	1 cut(s)	39
BmeT110I	CYCGRG	1 cut(s)	356
BmgT120I	GGNCC	1 cut(s)	9
BmiI	GGNNCC	1 cut(s)	495
BmrFI	CCNGG	1 cut(s)	39
BmrI	ACTGGG	1 cut(s)	16
BmsI	GCATC	5 cut(s)	1048, 1210, 1233, 1303, 1914
BmuI	ACTGGG	1 cut(s)	16
BpiI	GAAGAC	2 cut(s)	956, 1151
BplI	GAGNNNNNCTC	2 cut(s)	316, 348
BpmI	CTGGAG	2 cut(s)	939, 1340
Bpu14I	TTCGAA	2 cut(s)	420, 1458
BpuEI	CTTGAG	1 cut(s)	1183
BsaBI	GATNNNNATC	1 cut(s)	1841
BsaI	GGTCTC	2 cut(s)	29, 2051
BsaJI	CCNNGG	4 cut(s)	783, 1084, 1114, 1129
BsaWI	WCCGGW	1 cut(s)	2060
Bsc4I	CCNNNNNNNGG	4 cut(s)	503, 571, 1179, 1915
Bse118I	RCCGGY	2 cut(s)	560, 1973
Bse1I	ACTGG	3 cut(s)	11, 118, 850
Bse3DI	GCAATG	2 cut(s)	735, 938
Bse8I	GATNNNNATC	1 cut(s)	1841
BseBI	CCWGG	1 cut(s)	39
BseDI	CCNNGG	4 cut(s)	783, 1084, 1114, 1129
BseGI	GGATG	4 cut(s)	766, 1225, 1905, 2078
BseJI	GATNNNNATC	1 cut(s)	1841
BseLI	CCNNNNNNNGG	4 cut(s)	503, 571, 1179, 1915
BseMI	GCAATG	2 cut(s)	735, 938
BseMII	CTCAG	6 cut(s)	347, 959, 1230, 1346, 1436, 1599
BseNI	ACTGG	3 cut(s)	11, 118, 850
BseRI	GAGGAG	1 cut(s)	770
BseXI	GCAGC	1 cut(s)	1023
BsgI	GTGCAG	2 cut(s)	469, 954
Bsh1236I	CGCG	3 cut(s)	901, 903, 1874
Bsh1285I	CGRYCG	1 cut(s)	412
BshFI	GGCC	7 cut(s)	11, 42, 560, 564, 705, 1113, 1172
BshNI	GGYRCC	1 cut(s)	493
BsiEI	CGRYCG	1 cut(s)	412
BsiHKAI	GWGCWC	1 cut(s)	1888
BsiHKCI	CYCGRG	1 cut(s)	356
BsiSI	CCGG	3 cut(s)	561, 1974, 2061
BslFI	GGGAC	2 cut(s)	1440, 1862
BslI	CCNNNNNNNGG	4 cut(s)	503, 571, 1179, 1915
BsmAI	GTCTC	3 cut(s)	29, 376, 2051
BsmFI	GGGAC	2 cut(s)	1440, 1862
BsmI	GAATGC	4 cut(s)	385, 595, 1077, 1900
BsnI	GGCC	7 cut(s)	11, 42, 560, 564, 705, 1113, 1172
Bso31I	GGTCTC	2 cut(s)	29, 2051
BsoBI	CYCGRG	1 cut(s)	356
Bsp119I	TTCGAA	2 cut(s)	420, 1458
Bsp1286I	GDGCHC	1 cut(s)	1888
Bsp1407I	TGTACA	2 cut(s)	123, 1497
Bsp143I	GATC	5 cut(s)	148, 298, 690, 811, 1581
Bsp19I	CCATGG	2 cut(s)	1084, 1129
BspACI	CCGC	6 cut(s)	632, 903, 989, 1158, 1692, 1874
BspANI	GGCC	7 cut(s)	11, 42, 560, 564, 705, 1113, 1172
BspCNI	CTCAG	6 cut(s)	346, 958, 1231, 1345, 1437, 1598
BspFNI	CGCG	3 cut(s)	901, 903, 1874
BspLI	GGNNCC	1 cut(s)	495
BspMAI	CTGCAG	1 cut(s)	1041
BspPI	GGATC	1 cut(s)	806
BspQI	GCTCTTC	1 cut(s)	297
BspT104I	TTCGAA	2 cut(s)	420, 1458
BspT107I	GGYRCC	1 cut(s)	493
BspTNI	GGTCTC	2 cut(s)	29, 2051
BsrDI	GCAATG	2 cut(s)	735, 938
BsrFI	RCCGGY	2 cut(s)	560, 1973
BsrGI	TGTACA	2 cut(s)	123, 1497
BsrI	ACTGG	3 cut(s)	11, 118, 850
BssAI	RCCGGY	2 cut(s)	560, 1973
BssECI	CCNNGG	4 cut(s)	783, 1084, 1114, 1129
BssMI	GATC	5 cut(s)	148, 298, 690, 811, 1581
BssSI	CACGAG	1 cut(s)	1982
BssT1I	CCWWGG	3 cut(s)	1084, 1114, 1129
Bst2BI	CACGAG	1 cut(s)	1982
Bst2UI	CCWGG	1 cut(s)	39
Bst4CI	ACNGT	7 cut(s)	410, 498, 784, 1523, 1604, 1784, 1964
Bst6I	CTCTTC	3 cut(s)	66, 297, 645
BstAUI	TGTACA	2 cut(s)	123, 1497
BstBI	TTCGAA	2 cut(s)	420, 1458
BstC8I	GCNNGC	6 cut(s)	178, 509, 562, 768, 1789, 1975
BstDEI	CTNAG	7 cut(s)	333, 945, 1239, 1332, 1445, 1585, 1687
BstDSI	CCRYGG	3 cut(s)	783, 1084, 1129
BstEII	GGTNACC	1 cut(s)	778
BstF5I	GGATG	4 cut(s)	766, 1225, 1905, 2078
BstFNI	CGCG	3 cut(s)	901, 903, 1874
BstHHI	GCGC	3 cut(s)	620, 903, 1318
BstKTI	GATC	5 cut(s)	151, 301, 693, 814, 1584
BstMAI	GTCTC	3 cut(s)	29, 376, 2051
BstMBI	GATC	5 cut(s)	148, 298, 690, 811, 1581
BstMCI	CGRYCG	1 cut(s)	412
BstMWI	GCNNNNNNNGC	2 cut(s)	1324, 1688
BstNI	CCWGG	1 cut(s)	39
BstNSI	RCATGY	2 cut(s)	1195, 1498
BstPI	GGTNACC	1 cut(s)	778
BstSCI	CCNGG	1 cut(s)	37
BstSFI	CTRYAG	1 cut(s)	1037
BstUI	CGCG	3 cut(s)	901, 903, 1874
BstV1I	GCAGC	1 cut(s)	1023
BstV2I	GAAGAC	2 cut(s)	956, 1151
BsuRI	GGCC	7 cut(s)	11, 42, 560, 564, 705, 1113, 1172
BtgI	CCRYGG	3 cut(s)	783, 1084, 1129
BtsCI	GGATG	4 cut(s)	766, 1225, 1905, 2078
BtsI	GCAGTG	1 cut(s)	1068
BtsIMutI	CAGTG	3 cut(s)	383, 1068, 1780
Cac8I	GCNNGC	6 cut(s)	178, 509, 562, 768, 1789, 1975
CaiI	CAGNNNCTG	3 cut(s)	340, 821, 917
CfoI	GCGC	3 cut(s)	620, 903, 1318
Cfr10I	RCCGGY	2 cut(s)	560, 1973
Cfr13I	GGNCC	1 cut(s)	9
CseI	GACGC	1 cut(s)	1838
Csp6I	GTAC	8 cut(s)	124, 285, 494, 1195, 1408, 1442, 1498, 1698
CviQI	GTAC	8 cut(s)	124, 285, 494, 1195, 1408, 1442, 1498, 1698
DdeI	CTNAG	7 cut(s)	333, 945, 1239, 1332, 1445, 1585, 1687
DpnI	GATC	5 cut(s)	150, 300, 692, 813, 1583
DpnII	GATC	5 cut(s)	148, 298, 690, 811, 1581
DraI	TTTAAA	2 cut(s)	201, 742
DraIII	CACNNNGTG	2 cut(s)	136, 1506
EaeI	YGGCCR	2 cut(s)	703, 1170
Eam1104I	CTCTTC	3 cut(s)	66, 297, 645
EarI	CTCTTC	3 cut(s)	66, 297, 645
Ecl136II	GAGCTC	1 cut(s)	1886
Eco130I	CCWWGG	3 cut(s)	1084, 1114, 1129
Eco24I	GRGCYC	1 cut(s)	1888
Eco31I	GGTCTC	2 cut(s)	29, 2051
Eco32I	GATATC	1 cut(s)	1281
Eco53kI	GAGCTC	1 cut(s)	1886
Eco57I	CTGAAG	1 cut(s)	1676
Eco88I	CYCGRG	1 cut(s)	356
Eco91I	GGTNACC	1 cut(s)	778
EcoICRI	GAGCTC	1 cut(s)	1886
EcoO65I	GGTNACC	1 cut(s)	778
EcoRI	GAATTC	1 cut(s)	1270
EcoRII	CCWGG	1 cut(s)	37
EcoRV	GATATC	1 cut(s)	1281
EcoT14I	CCWWGG	3 cut(s)	1084, 1114, 1129
EcoT38I	GRGCYC	1 cut(s)	1888
ErhI	CCWWGG	3 cut(s)	1084, 1114, 1129
FaqI	GGGAC	2 cut(s)	1440, 1862
FauNDI	CATATG	1 cut(s)	1438
FblI	GTMKAC	1 cut(s)	48
Fnu4HI	GCNGC	4 cut(s)	633, 904, 1037, 1692
FokI	GGATG	4 cut(s)	773, 1232, 1892, 2085
FriOI	GRGCYC	1 cut(s)	1888
FseI	GGCCGGCC	1 cut(s)	564
Fsp4HI	GCNGC	4 cut(s)	633, 904, 1037, 1692
FspBI	CTAG	3 cut(s)	981, 1055, 1377
FspI	TGCGCA	1 cut(s)	619
GlaI	GCGC	3 cut(s)	619, 902, 1317
GluI	GCNGC	4 cut(s)	633, 904, 1037, 1692
GsuI	CTGGAG	2 cut(s)	939, 1340
HaeIII	GGCC	7 cut(s)	11, 42, 560, 564, 705, 1113, 1172
HapII	CCGG	3 cut(s)	561, 1974, 2061
HgaI	GACGC	1 cut(s)	1838
HhaI	GCGC	3 cut(s)	620, 903, 1318
Hin6I	GCGC	3 cut(s)	618, 901, 1316
HinP1I	GCGC	3 cut(s)	618, 901, 1316
HincII	GTYRAC	2 cut(s)	265, 1155
HindII	GTYRAC	2 cut(s)	265, 1155
HindIII	AAGCTT	2 cut(s)	99, 174
HinfI	GANTC	8 cut(s)	235, 270, 569, 575, 818, 914, 1163, 1361
HpaII	CCGG	3 cut(s)	561, 1974, 2061
HphI	GGTGA	5 cut(s)	671, 790, 1024, 1930, 2078
Hpy166II	GTNNAC	5 cut(s)	49, 265, 1155, 1382, 1500
Hpy188I	TCNGA	6 cut(s)	336, 574, 948, 1240, 1335, 1636
Hpy8I	GTNNAC	5 cut(s)	49, 265, 1155, 1382, 1500
Hpy99I	CGWCG	1 cut(s)	1832
HpyAV	CCTTC	6 cut(s)	803, 1296, 1454, 1741, 1915, 2010
HpyCH4III	ACNGT	7 cut(s)	410, 498, 784, 1523, 1604, 1784, 1964
HpyCH4IV	ACGT	2 cut(s)	745, 1754
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1324, 1688
HpyF3I	CTNAG	7 cut(s)	333, 945, 1239, 1332, 1445, 1585, 1687
HpySE526I	ACGT	2 cut(s)	745, 1754
HspAI	GCGC	3 cut(s)	618, 901, 1316
KpnI	GGTACC	1 cut(s)	497
KroI	GCCGGC	2 cut(s)	560, 1973
KroNI	GCCGGC	2 cut(s)	562, 1975
Kzo9I	GATC	5 cut(s)	148, 298, 690, 811, 1581
LguI	GCTCTTC	1 cut(s)	297
LmnI	GCTCC	2 cut(s)	171, 1883
Lsp1109I	GCAGC	1 cut(s)	1023
LweI	GCATC	5 cut(s)	1048, 1210, 1233, 1303, 1914
MaeI	CTAG	3 cut(s)	981, 1055, 1377
MaeII	ACGT	2 cut(s)	745, 1754
MaeIII	GTNAC	3 cut(s)	659, 778, 1133
MalI	GATC	5 cut(s)	150, 300, 692, 813, 1583
MboI	GATC	5 cut(s)	148, 298, 690, 811, 1581
MhlI	GDGCHC	1 cut(s)	1888
MlsI	TGGCCA	1 cut(s)	705
MluNI	TGGCCA	1 cut(s)	705
MlyI	GAGTC	1 cut(s)	827
MmeI	TCCRAC	3 cut(s)	408, 1456, 1803
Mox20I	TGGCCA	1 cut(s)	705
MroNI	GCCGGC	2 cut(s)	560, 1973
MroXI	GAANNNNTTC	1 cut(s)	341
MscI	TGGCCA	1 cut(s)	705
MseI	TTAA	4 cut(s)	200, 210, 555, 741
MslI	CAYNNNNRTG	3 cut(s)	831, 1437, 2096
Msp20I	TGGCCA	1 cut(s)	705
MspA1I	CMGCKG	1 cut(s)	1160
MspI	CCGG	3 cut(s)	561, 1974, 2061
MspR9I	CCNGG	1 cut(s)	39
MssI	GTTTAAAC	1 cut(s)	742
Mva1269I	GAATGC	4 cut(s)	385, 595, 1077, 1900
MvaI	CCWGG	1 cut(s)	39
MvnI	CGCG	3 cut(s)	901, 903, 1874
MwoI	GCNNNNNNNGC	2 cut(s)	1324, 1688
NaeI	GCCGGC	2 cut(s)	562, 1975
NcoI	CCATGG	2 cut(s)	1084, 1129
NdeI	CATATG	1 cut(s)	1438
NdeII	GATC	5 cut(s)	148, 298, 690, 811, 1581
NgoMIV	GCCGGC	2 cut(s)	560, 1973
NlaIV	GGNNCC	1 cut(s)	495
NmuCI	GTSAC	2 cut(s)	659, 778
NsbI	TGCGCA	1 cut(s)	619
NspI	RCATGY	2 cut(s)	1195, 1498
NspV	TTCGAA	2 cut(s)	420, 1458
PciI	ACATGT	1 cut(s)	1494
PciSI	GCTCTTC	1 cut(s)	297
PctI	GAATGC	4 cut(s)	385, 595, 1077, 1900
PdiI	GCCGGC	2 cut(s)	562, 1975
PdmI	GAANNNNTTC	1 cut(s)	341
PfeI	GAWTC	7 cut(s)	235, 270, 569, 575, 914, 1163, 1361
PflFI	GACNNNGTC	1 cut(s)	1353
PkrI	GCNGC	4 cut(s)	634, 905, 1038, 1693
PleI	GAGTC	1 cut(s)	826
PmeI	GTTTAAAC	1 cut(s)	742
PpsI	GAGTC	1 cut(s)	826
PscI	ACATGT	1 cut(s)	1494
Psp124BI	GAGCTC	1 cut(s)	1888
Psp1406I	AACGTT	1 cut(s)	1754
Psp6I	CCWGG	1 cut(s)	37
PspEI	GGTNACC	1 cut(s)	778
PspGI	CCWGG	1 cut(s)	37
PspN4I	GGNNCC	1 cut(s)	495
PspPI	GGNCC	1 cut(s)	9
PstI	CTGCAG	1 cut(s)	1041
PstNI	CAGNNNCTG	3 cut(s)	340, 821, 917
PsyI	GACNNNGTC	1 cut(s)	1353
RigI	GGCCGGCC	1 cut(s)	564
RsaI	GTAC	8 cut(s)	125, 286, 495, 1196, 1409, 1443, 1499, 1699
RsaNI	GTAC	8 cut(s)	124, 285, 494, 1195, 1408, 1442, 1498, 1698
RseI	CAYNNNNRTG	3 cut(s)	831, 1437, 2096
SacI	GAGCTC	1 cut(s)	1888
SapI	GCTCTTC	1 cut(s)	297
SaqAI	TTAA	4 cut(s)	200, 210, 555, 741
SatI	GCNGC	4 cut(s)	633, 904, 1037, 1692
Sau3AI	GATC	5 cut(s)	148, 298, 690, 811, 1581
Sau96I	GGNCC	1 cut(s)	9
ScaI	AGTACT	1 cut(s)	1409
SchI	GAGTC	1 cut(s)	827
ScrFI	CCNGG	1 cut(s)	39
SduI	GDGCHC	1 cut(s)	1888
SfaNI	GCATC	5 cut(s)	1048, 1210, 1233, 1303, 1914
SfcI	CTRYAG	1 cut(s)	1037
SfuI	TTCGAA	2 cut(s)	420, 1458
SmiI	ATTTAAAT	1 cut(s)	201
SmiMI	CAYNNNNRTG	3 cut(s)	831, 1437, 2096
SmlI	CTYRAG	1 cut(s)	1198
SmoI	CTYRAG	1 cut(s)	1198
SsiI	CCGC	6 cut(s)	632, 903, 989, 1158, 1692, 1874
SspMI	CTAG	3 cut(s)	981, 1055, 1377
SstI	GAGCTC	1 cut(s)	1888
StyD4I	CCNGG	1 cut(s)	37
StyI	CCWWGG	3 cut(s)	1084, 1114, 1129
SwaI	ATTTAAAT	1 cut(s)	201
TaaI	ACNGT	7 cut(s)	410, 498, 784, 1523, 1604, 1784, 1964
TaiI	ACGT	2 cut(s)	748, 1757
TaqI	TCGA	4 cut(s)	345, 420, 602, 1458
TaqII	GACCGA	1 cut(s)	282
TatI	WGTACW	6 cut(s)	123, 1194, 1407, 1441, 1497, 1697
TauI	GCSGC	3 cut(s)	635, 906, 1694
TfiI	GAWTC	7 cut(s)	235, 270, 569, 575, 914, 1163, 1361
Tru1I	TTAA	4 cut(s)	200, 210, 555, 741
Tru9I	TTAA	4 cut(s)	200, 210, 555, 741
TscAI	CASTG	3 cut(s)	390, 1068, 1787
TseFI	GTSAC	2 cut(s)	659, 778
TseI	GCWGC	1 cut(s)	1036
Tsp45I	GTSAC	2 cut(s)	659, 778
TspDTI	ATGAA	9 cut(s)	17, 227, 323, 530, 1064, 1352, 1421, 1706, 1760
TspGWI	ACGGA	1 cut(s)	1152
TspRI	CASTG	3 cut(s)	390, 1068, 1787
Tth111I	GACNNNGTC	1 cut(s)	1353
XapI	RAATTY	4 cut(s)	67, 202, 1270, 1415
XceI	RCATGY	2 cut(s)	1195, 1498
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1263
XmiI	GTMKAC	1 cut(s)	48
XmnI	GAANNNNTTC	1 cut(s)	341
XspI	CTAG	3 cut(s)	981, 1055, 1377
ZrmI	AGTACT	1 cut(s)	1409

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.