Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr15

Orthogroup ID

OG0009824

Physical Location & Seq

Genomic Coordinates Forward (+)

4811145 .. 4815184

Gene Structure 4040 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom15g07770.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3408 bp

ATGAACTTGGCCTTTTCTTTCGGTCTCTCTGCGAAGCCCAACCTTCCCTATTTCCACTCTCTCCTAAAATCTCACAGCGAAAGCAAAAATCCTAAACAGGCACTGCTTCTTTTTCGCCAGTTGTTTGAGTACAATTTGAAGCCCAATGATCTCACTTTCTCTCTGCTCCTTAAATCCTGCACTTCTTCCTCCTCCTCGGGTTTTAATTCAGTGAGCTCAAAACTAGAAGCAAATCAGATTCATACCCACTTGCTGAAATCAGGTGTCAATCGATATGTATATGTGAGTACTGCTCTTCTTGATTTGTATATGAAATTGGATTGTGTAAGGGCTGCCCAGAAGGTGTTTGATGATATGCCTGACAGAGATGTTGTCTCATGGAATGCGTTGATTTCTGGGTTTTCTCGAAATGGGTATGCTTTTGAAGCGTTGAATTGCTTTGTCCGAATGTGTAGAGAGGGGCTTTGTCCTTGTCGGACGACTTTGGTTAGTTTGGTTCCGTCGTGTGGTAGGCAAGAGTTAGTTTTTCTTGGGAAATGTGTTCATGGGTTTGGAATTAAGGCGGGCCTGGATTCGGATTCTAACGTGAAGAATGTGCTTACCTCGATGTATGCTAAATCTGCAGATTTGGAGGCGGCGGAGCTCTTGTTTGAAGAGATAGTTGACAAGAGTGTAGTTTCTTGGAATACTATGATTGGCGCTTATGGACAAAATGGTTTCTTTCATGAGGCAATGCTTGTCTTTAAACAAATGCAGGAGGAAAATGTTCCGGCCAATCTGGTGACCATGGTAAGCCTCCTGTCAGCAAATGCAAATCCTGAGTCTACCCATTGTCATGCCCTTAAAACTGGTCATGCAAATGATGCTTCTGTGATTACTTCGCTAATTTGTGAATATGCAACACGAGGGAACACAGAATCCGGAAAACTGCTTTACAGGTCATTGCCTCAGAAGAACTTGGTTTCCCTGACTGCAATTATTTCAAGCTATGCTGAGAAAGATAACATAGCTCAGGTACTGGAATGCTTTGCTCACTTGCAGCGGTTAGACATGAAACTGGACGCAGTTTCTATGGTTTGCATCCTTCATGGGATAAAAGTCCCTGTTGATATTGGCCTTGGACTTGCTTTCCATGGTTATGGAATAAAGATTGGGCTGACGGCTGATTCTTTGGTTGCAAATTGTTTGATAAGCATGTACTCGAGGTTTGACAAGATAGAAGCCGCTTTTTCTTTATTCCTTGATATGCAAGCAAAATCGTTGCTTACTTGGAATTCTTTGATATCGGGATGTGTACAAGTGGGAAGGTCAAGTGATGCCCTGGACTTGTTTCTCCAAATGAAAATGTCCGGATATAGTCCAGATAGCATCACTGTTTCTAGCTTACTATCTGGGTGTGGCCAAATTGGGTACTTGCGATTTGGGGAGAAACTTCATAACTATGTCCTCCGAAACAATCTTGAAGTGGAAGATTTTGTTGGAACCGCTCTTATAGACATGTACACCAAGTGTGGAAGAATAGAGCTTGCTGAAAGGGTGTTTAAGAGCATCCAAGAACCATGTTTGGCATCATGGAACTCAATCCTCTTGGGTTATAGCCACTACGGGTCAGAACATAGAGCTCTTGCTTGCTTCTTGAAAATGCAAGAGCAGGGGATAATGCCCGATAATATCACTTTTTTGGGAGTTTTGGTTGCTTGTGCTCATGGAGGTTTTGTTGAGGAGGGAAGAAAATATTTCCAAATAATGAGGGAAGAGTTCAATATAGTGCCATGCTTGCAACACTGCGCTTGCATGGTTGGTCTCTTTGGCCGCGCGGGCTTCTTCCAGGAGGCATTGGTTTTCATCAGAGATATGGAGATGGAGCCCGACTTCGCAGTAAACCCTAACGGAAAAGTAAGACGATGCCAAAAAACCGCAAAAGCGCTCCCAAATTTGAAATTTGAACTTTTCATCCCAACACACCATCTCACTCTCAGACTCCCAAAGCTCTCATCTTTCACATACCATTTCCCAAATCTTCGTACAAAAATGGGCGGAGCTCACAGCCGCGAACACCTCGAGCTTTCCGACTCCGACGAGGAAGAGAGCGAAGAGCAGGAGAGCTACGAGGACGTGGAGGAAACTGAAGCCGACCAGCGCCAGAGATCCGCCGAGCGGGGAACCAAAACGCCGTCGTCGGCTGCATTAGACGACGTGGACGCCAAGCTCAAGGCTTTGAGTCTCAAGTACGGGTCTTCTTCCAGGAACACGAATCTGAAGAATCCGGTGAAGCTGTACCTCCACATTGGAGGGAACACCCCAAAAGCGAAATGGGTAACTTCCGAAAAACTCACTTCTTTCAATTTTATTAAGACATCTCGAATGGAGGTTGATAATGATGAGGAGGAAGAGGAAGAAGAGGAATTTGATGAGGAGGGTTTGTGGGTTTTGAGGGTGGGGGCCAAAGTTAAGGCTAAGGTATCGGCCGAGATGCAATTGCTCACTTTTGCCGATCAGCGGCGTGTCGATTTCTTTGCCAGAGGCGTGTGGGCAATGAAGTTTTTCAGTGATGAGGAGTATAGTGCTTTTGTGATTAAGTACAATGACTGTTTGTTTGAGAACACTTATGGGTATGAGGCCACTGAGGAGAACAGGGTGAAGGTTTATGGGAAAGATTTTGTTGGGTGGGCGAAGCCCGAAATGGCGGATGATTCGGTCTGGGAAGATGCGGAGGATAATTTTTTGAAGAGCCCTGGCTCAGCAACACCAGTGAGGGGAAATCAGAATTTGAGAGAGGAGTTTGAGGAGGCCCACAATGGCGGTATACAGAGCTTGGCATTAGGTGCATTGGACAATAGTTTCTTGGTGGGGAACTCTGGCATTCAGGTTGTTAAGAATTTTGCTCATGGAATACATGGTAAAGGTGTTTATGTGAATTTTGATGATGGGAGCTATGGAGGCGGTTCAAATTTGGCACGGTCTACACCTAGGAAGGCTCTGCTGATGAAGGCCGAGACTAACATGCTCCTTATGAGTCCGATGAATGAAGGGAAGCCTCATACAACCGGGCTCCATCAGCTTGATATCGAAACCGGGAAGGTTGTTACTGAGTGGAAGTTTGAGAAAGATGGAGCTGACATTACAATGAGGGATATCACAAATGATAGTAAGGGAGCACAGTTGGACCCCTCAGGATCGACATTCTTGGGTTTGGATGACAACAGGCTTTGCCGGTGGGATATGCGTGATAGGAAGGGAATGGTTCAGGACCTTGCAGCTTCTAGTGGTCCTGTTCTCAATTGGAACCAAGGGCATCAGTTCTCAAGAGGGACTAACTTTCAGTGCTTTGCTAGCACTGGTGATGGCTCAATTGCTGTTGGGTCGCTTGATGGGAAGATCAGGTTGTACGATCGATCAATTCGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 VID27

Protein Analysis

1136

Amino Acids

126.35

Weight (kDa)

5.72

Isoelectric Point (pI)

34.8

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009824)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G04860
fragaria_vesca	FvH4_2g34460
malus_domestica	MD15G1083200.v1.1
prunus_persica	Prupe.1G435700_v2.0.a1 Prupe.1G435700_v2.0.a1 Prupe.1G435700_v2.0.a1 Prupe.1G435700_v2.0.a1 Prupe.1G435700_v2.0.a1 Prupe.1G435700_v2.0.a1
pyrus_communis	pycom15g07770
rosa_chinensis	RchiOBHm_Chr6g0307911
rosa_laevigata	RLG00000010687
rosa_multiflora	Rmu_sc0003252.1_g000018 Rmu_sc0032565.1_g000001
rosa_roxburghii	Rroxscaffold_7G00160770
rosa_rugosa	Rorug06G0361600
rosa_samantha	Rh6AG470700 Rh6BG481700 Rh6CG487100 Rh6DG473200
rosa_wichuraiana	Rw6G041100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	2 cut(s)	1487, 2158
AccI	GTMKAC	3 cut(s)	824, 2806, 2963
AccII	CGCG	3 cut(s)	1815, 1817, 2052
AccIII	TCCGGA	2 cut(s)	920, 1349
AclWI	GGATC	2 cut(s)	2142, 3184
AcoI	YGGCCR	4 cut(s)	771, 1399, 1810, 2466
AcsI	RAATTY	8 cut(s)	1273, 1933, 1940, 2405, 2767, 2878, 2917, 2950
AcuI	CTGAAG	2 cut(s)	2148, 2279
AcyI	GRCGYC	1 cut(s)	2202
AdeI	CACNNNGTG	1 cut(s)	1509
AfeI	AGCGCT	1 cut(s)	1926
AfiI	CCNNNNNNNGG	5 cut(s)	506, 574, 2157, 2499, 2756
AflIII	ACRYGT	1 cut(s)	1497
AjiI	CACGTC	2 cut(s)	2116, 2197
AjnI	CCWGG	5 cut(s)	567, 1320, 1827, 2243, 2734
AjuI	GAANNNNNNNTTGG	2 cut(s)	1461, 1493
AloI	GAACNNNNNNTCC	6 cut(s)	902, 934, 947, 979, 1938, 1970
Alw21I	GWGCWC	6 cut(s)	218, 645, 1624, 1705, 2044, 3160
Alw26I	GTCTC	5 cut(s)	29, 379, 1808, 2228, 2990
AlwI	GGATC	2 cut(s)	2142, 3184
AlwNI	CAGNNNCTG	2 cut(s)	103, 1018
Ama87I	CYCGRG	3 cut(s)	196, 1201, 2060
Aor13HI	TCCGGA	2 cut(s)	920, 1349
Aor51HI	AGCGCT	1 cut(s)	1926
ApeKI	GCWGC	4 cut(s)	332, 1039, 2183, 3257
ApoI	RAATTY	8 cut(s)	1273, 1933, 1940, 2405, 2767, 2878, 2917, 2950
ArsI	GACNNNNNNTTYG	4 cut(s)	806, 838, 2579, 2611
Asp700I	GAANNNNTTC	2 cut(s)	765, 2543
AspA2I	CCTAGG	1 cut(s)	2969
AspLEI	GCGC	5 cut(s)	701, 1790, 1817, 1927, 2142
AspS9I	GGNCC	6 cut(s)	565, 2442, 2791, 3166, 3250, 3269
AsuC2I	CCSGG	2 cut(s)	3049, 3076
AsuHPI	GGTGA	4 cut(s)	793, 2281, 2650, 3353
AsuNHI	GCTAGC	1 cut(s)	3332
AvaI	CYCGRG	3 cut(s)	196, 1201, 2060
AvaII	GGWCC	3 cut(s)	3166, 3250, 3269
AvrII	CCTAGG	1 cut(s)	2969
AxyI	CCTNAGG	1 cut(s)	3172
BalI	TGGCCA	1 cut(s)	1401
BanII	GRGCYC	7 cut(s)	218, 645, 1624, 1869, 2044, 2735, 3054
BauI	CACGAG	1 cut(s)	903
BbsI	GAAGAC	1 cut(s)	2229
Bbv12I	GWGCWC	6 cut(s)	218, 645, 1624, 1705, 2044, 3160
BbvI	GCAGC	4 cut(s)	319, 1051, 2170, 3269
BccI	CCATC	7 cut(s)	1855, 1974, 2921, 3063, 3104, 3338, 3365
BceAI	ACGGC	2 cut(s)	1176, 2158
BcgI	CGANNNNNNTGC	2 cut(s)	2498, 2532
BciT130I	CCWGG	5 cut(s)	569, 1322, 1829, 2245, 2736
BcnI	CCSGG	2 cut(s)	3049, 3076
BcoDI	GTCTC	5 cut(s)	29, 379, 1808, 2228, 2990
BfaI	CTAG	5 cut(s)	224, 1380, 2970, 3264, 3333
BfmI	CTRYAG	1 cut(s)	621
BfoI	RGCGCY	3 cut(s)	702, 1928, 2143
BglI	GCCNNNNNGGC	1 cut(s)	1818
BisI	GCNGC	9 cut(s)	333, 636, 1040, 1224, 1813, 2050, 2184, 2501, 3258
BlnI	CCTAGG	1 cut(s)	2969
BlpI	GCTNAGC	1 cut(s)	2740
BlsI	GCNGC	9 cut(s)	334, 637, 1041, 1225, 1814, 2051, 2185, 2502, 3259
BmcAI	AGTACT	1 cut(s)	289
Bme1390I	CCNGG	7 cut(s)	569, 1322, 1829, 2245, 2736, 3049, 3076
Bme18I	GGWCC	3 cut(s)	3166, 3250, 3269
BmeT110I	CYCGRG	3 cut(s)	196, 1201, 2060
BmgBI	CACGTC	2 cut(s)	2116, 2197
BmgT120I	GGNCC	6 cut(s)	565, 2442, 2791, 3166, 3250, 3269
BmiI	GGNNCC	8 cut(s)	498, 1483, 1866, 2164, 2443, 3053, 3168, 3287
BmrFI	CCNGG	7 cut(s)	569, 1322, 1829, 2245, 2736, 3049, 3076
BmtI	GCTAGC	1 cut(s)	3336
BpiI	GAAGAC	1 cut(s)	2229
BplI	GAGNNNNNCTC	2 cut(s)	277, 309
Bpu10I	CCTNAGC	2 cut(s)	1011, 2457
Bpu1102I	GCTNAGC	1 cut(s)	2740
BpuEI	CTTGAG	3 cut(s)	2195, 2210, 3289
BpuMI	CCSGG	2 cut(s)	3049, 3076
Bsa29I	ATCGAT	2 cut(s)	271, 3394
BsaHI	GRCGYC	1 cut(s)	2202
BsaI	GGTCTC	2 cut(s)	29, 1808
BsaJI	CCNNGG	8 cut(s)	195, 786, 1117, 1132, 1320, 2734, 2969, 3289
BsaWI	WCCGGW	3 cut(s)	920, 1349, 2266
BsaXI	ACNNNNNCTCC	8 cut(s)	632, 662, 1677, 1701, 1707, 1731, 2408, 2438
Bsc4I	CCNNNNNNNGG	5 cut(s)	506, 574, 2157, 2499, 2756
Bse118I	RCCGGY	1 cut(s)	3213
Bse1I	ACTGG	6 cut(s)	118, 853, 1023, 1062, 2750, 3343
Bse21I	CCTNAGG	1 cut(s)	3172
Bse3DI	GCAATG	3 cut(s)	738, 941, 2541
BseAI	TCCGGA	2 cut(s)	920, 1349
BseBI	CCWGG	5 cut(s)	569, 1322, 1829, 2245, 2736
BseCI	ATCGAT	2 cut(s)	271, 3394
BseDI	CCNNGG	8 cut(s)	195, 786, 1117, 1132, 1320, 2734, 2969, 3289
BseGI	GGATG	6 cut(s)	1080, 1295, 1548, 1953, 2695, 3202
BseLI	CCNNNNNNNGG	5 cut(s)	506, 574, 2157, 2499, 2756
BseMI	GCAATG	3 cut(s)	738, 941, 2541
BseMII	CTCAG	9 cut(s)	810, 962, 984, 1025, 1990, 2616, 2754, 3081, 3186
BseNI	ACTGG	6 cut(s)	118, 853, 1023, 1062, 2750, 3343
BseRI	GAGGAG	9 cut(s)	181, 184, 1736, 2399, 2429, 2570, 2642, 2792, 2801
BseX3I	CGGCCG	1 cut(s)	2466
BseXI	GCAGC	4 cut(s)	319, 1051, 2170, 3269
BsgI	GTGCAG	1 cut(s)	163
Bsh1236I	CGCG	3 cut(s)	1815, 1817, 2052
Bsh1285I	CGRYCG	2 cut(s)	2469, 3394
BshVI	ATCGAT	2 cut(s)	271, 3394
BsiEI	CGRYCG	2 cut(s)	2469, 3394
BsiHKAI	GWGCWC	6 cut(s)	218, 645, 1624, 1705, 2044, 3160
BsiHKCI	CYCGRG	3 cut(s)	196, 1201, 2060
BsiSI	CCGG	7 cut(s)	770, 921, 1350, 2267, 3048, 3075, 3214
BslFI	GGGAC	2 cut(s)	1085, 3325
BslI	CCNNNNNNNGG	5 cut(s)	506, 574, 2157, 2499, 2756
BsmAI	GTCTC	5 cut(s)	29, 379, 1808, 2228, 2990
BsmFI	GGGAC	2 cut(s)	1085, 3325
BsmI	GAATGC	3 cut(s)	388, 1028, 2862
Bso31I	GGTCTC	2 cut(s)	29, 1808
BsoBI	CYCGRG	3 cut(s)	196, 1201, 2060
Bsp1286I	GDGCHC	9 cut(s)	218, 645, 1624, 1705, 1869, 2044, 2735, 3054, 3160
Bsp13I	TCCGGA	2 cut(s)	920, 1349
Bsp1407I	TGTACA	2 cut(s)	1294, 1500
Bsp143I	GATC	7 cut(s)	148, 2147, 2494, 3176, 3378, 3391, 3395
Bsp1720I	GCTNAGC	1 cut(s)	2740
Bsp19I	CCATGG	2 cut(s)	786, 1132
BspCNI	CTCAG	9 cut(s)	811, 961, 985, 1024, 1989, 2617, 2753, 3082, 3185
BspDI	ATCGAT	2 cut(s)	271, 3394
BspEI	TCCGGA	2 cut(s)	920, 1349
BspFNI	CGCG	3 cut(s)	1815, 1817, 2052
BspHI	TCATGA	1 cut(s)	724
BspLI	GGNNCC	8 cut(s)	498, 1483, 1866, 2164, 2443, 3053, 3168, 3287
BspMAI	CTGCAG	1 cut(s)	625
BspOI	GCTAGC	1 cut(s)	3336
BspPI	GGATC	2 cut(s)	2142, 3184
BspQI	GCTCTTC	3 cut(s)	300, 2088, 2723
BspTNI	GGTCTC	2 cut(s)	29, 1808
BsrBI	CCGCTC	2 cut(s)	1487, 2158
BsrDI	GCAATG	3 cut(s)	738, 941, 2541
BsrFI	RCCGGY	1 cut(s)	3213
BsrGI	TGTACA	2 cut(s)	1294, 1500
BsrI	ACTGG	6 cut(s)	118, 853, 1023, 1062, 2750, 3343
BssAI	RCCGGY	1 cut(s)	3213
BssECI	CCNNGG	8 cut(s)	195, 786, 1117, 1132, 1320, 2734, 2969, 3289
BssMI	GATC	7 cut(s)	148, 2147, 2494, 3176, 3378, 3391, 3395
BssNAI	GTATAC	1 cut(s)	2807
BssNI	GRCGYC	1 cut(s)	2202
BssSI	CACGAG	1 cut(s)	903
BssT1I	CCWWGG	5 cut(s)	786, 1117, 1132, 2969, 3289
Bst1107I	GTATAC	1 cut(s)	2807
Bst2BI	CACGAG	1 cut(s)	903
Bst2UI	CCWGG	5 cut(s)	569, 1322, 1829, 2245, 2736
Bst4CI	ACNGT	4 cut(s)	1375, 2591, 2961, 3162
Bst6I	CTCTTC	8 cut(s)	300, 648, 1749, 2079, 2088, 2385, 2394, 2723
BstACI	GRCGYC	1 cut(s)	2202
BstAPI	GCANNNNNTGC	2 cut(s)	863, 2825
BstAUI	TGTACA	2 cut(s)	1294, 1500
BstC8I	GCNNGC	8 cut(s)	565, 1251, 1527, 1630, 1778, 1792, 1819, 3334
BstDSI	CCRYGG	2 cut(s)	786, 1132
BstEII	GGTNACC	1 cut(s)	781
BstF5I	GGATG	6 cut(s)	1080, 1295, 1548, 1953, 2695, 3202
BstFNI	CGCG	3 cut(s)	1815, 1817, 2052
BstH2I	RGCGCY	3 cut(s)	702, 1928, 2143
BstHHI	GCGC	5 cut(s)	701, 1790, 1817, 1927, 2142
BstKTI	GATC	7 cut(s)	151, 2150, 2497, 3179, 3381, 3394, 3398
BstMAI	GTCTC	5 cut(s)	29, 379, 1808, 2228, 2990
BstMBI	GATC	7 cut(s)	148, 2147, 2494, 3176, 3378, 3391, 3395
BstMCI	CGRYCG	2 cut(s)	2469, 3394
BstMWI	GCNNNNNNNGC	9 cut(s)	425, 620, 863, 1777, 1818, 2825, 2940, 3058, 3333
BstNI	CCWGG	5 cut(s)	569, 1322, 1829, 2245, 2736
BstNSI	RCATGY	3 cut(s)	1198, 1501, 3007
BstPI	GGTNACC	1 cut(s)	781
BstSCI	CCNGG	7 cut(s)	567, 1320, 1827, 2243, 2734, 3047, 3074
BstSFI	CTRYAG	1 cut(s)	621
BstUI	CGCG	3 cut(s)	1815, 1817, 2052
BstV1I	GCAGC	4 cut(s)	319, 1051, 2170, 3269
BstV2I	GAAGAC	1 cut(s)	2229
BstX2I	RGATCY	1 cut(s)	2147
BstXI	CCANNNNNNTGG	1 cut(s)	1139
BstYI	RGATCY	1 cut(s)	2147
BstZ17I	GTATAC	1 cut(s)	2807
BstZI	CGGCCG	1 cut(s)	2466
Bsu15I	ATCGAT	2 cut(s)	271, 3394
Bsu36I	CCTNAGG	1 cut(s)	3172
BsuTUI	ATCGAT	2 cut(s)	271, 3394
BtgI	CCRYGG	2 cut(s)	786, 1132
BtrI	CACGTC	2 cut(s)	2116, 2197
BtsCI	GGATG	6 cut(s)	1080, 1295, 1548, 1953, 2695, 3202
BtsI	GCAGTG	2 cut(s)	101, 1783
BtsIMutI	CAGTG	9 cut(s)	101, 216, 1371, 1783, 2554, 2622, 2757, 3329, 3336
Cac8I	GCNNGC	8 cut(s)	565, 1251, 1527, 1630, 1778, 1792, 1819, 3334
CaiI	CAGNNNCTG	2 cut(s)	103, 1018
CciI	TCATGA	1 cut(s)	724
CfoI	GCGC	5 cut(s)	701, 1790, 1817, 1927, 2142
Cfr10I	RCCGGY	1 cut(s)	3213
Cfr13I	GGNCC	6 cut(s)	565, 2442, 2791, 3166, 3250, 3269
ClaI	ATCGAT	2 cut(s)	271, 3394
CseI	GACGC	2 cut(s)	1070, 2210
DpnI	GATC	7 cut(s)	150, 2149, 2496, 3178, 3380, 3393, 3397
DpnII	GATC	7 cut(s)	148, 2147, 2494, 3176, 3378, 3391, 3395
DraI	TTTAAA	1 cut(s)	745
DraIII	CACNNNGTG	1 cut(s)	1509
EaeI	YGGCCR	4 cut(s)	771, 1399, 1810, 2466
EagI	CGGCCG	1 cut(s)	2466
Eam1104I	CTCTTC	8 cut(s)	300, 648, 1749, 2079, 2088, 2385, 2394, 2723
EarI	CTCTTC	8 cut(s)	300, 648, 1749, 2079, 2088, 2385, 2394, 2723
EciI	GGCGGA	4 cut(s)	653, 2052, 2140, 2702
Ecl136II	GAGCTC	4 cut(s)	216, 643, 1622, 2042
EclXI	CGGCCG	1 cut(s)	2466
Eco130I	CCWWGG	5 cut(s)	786, 1117, 1132, 2969, 3289
Eco24I	GRGCYC	7 cut(s)	218, 645, 1624, 1869, 2044, 2735, 3054
Eco31I	GGTCTC	2 cut(s)	29, 1808
Eco32I	GATATC	3 cut(s)	1284, 3067, 3136
Eco47I	GGWCC	3 cut(s)	3166, 3250, 3269
Eco47III	AGCGCT	1 cut(s)	1926
Eco52I	CGGCCG	1 cut(s)	2466
Eco53kI	GAGCTC	4 cut(s)	216, 643, 1622, 2042
Eco57I	CTGAAG	2 cut(s)	2148, 2279
Eco81I	CCTNAGG	1 cut(s)	3172
Eco88I	CYCGRG	3 cut(s)	196, 1201, 2060
Eco91I	GGTNACC	1 cut(s)	781
EcoICRI	GAGCTC	4 cut(s)	216, 643, 1622, 2042
EcoO109I	RGGNCCY	1 cut(s)	3250
EcoO65I	GGTNACC	1 cut(s)	781
EcoRI	GAATTC	1 cut(s)	1273
EcoRII	CCWGG	5 cut(s)	567, 1320, 1827, 2243, 2734
EcoRV	GATATC	3 cut(s)	1284, 3067, 3136
EcoT14I	CCWWGG	5 cut(s)	786, 1117, 1132, 2969, 3289
EcoT38I	GRGCYC	7 cut(s)	218, 645, 1624, 1869, 2044, 2735, 3054
ErhI	CCWWGG	5 cut(s)	786, 1117, 1132, 2969, 3289
FaqI	GGGAC	2 cut(s)	1085, 3325
FauI	CCCGC	3 cut(s)	556, 1810, 2151
FblI	GTMKAC	3 cut(s)	824, 2806, 2963
Fnu4HI	GCNGC	9 cut(s)	333, 636, 1040, 1224, 1813, 2050, 2184, 2501, 3258
FokI	GGATG	6 cut(s)	1067, 1302, 1535, 1940, 2702, 3209
FriOI	GRGCYC	7 cut(s)	218, 645, 1624, 1869, 2044, 2735, 3054
Fsp4HI	GCNGC	9 cut(s)	333, 636, 1040, 1224, 1813, 2050, 2184, 2501, 3258
FspBI	CTAG	5 cut(s)	224, 1380, 2970, 3264, 3333
GlaI	GCGC	5 cut(s)	700, 1789, 1816, 1926, 2141
GluI	GCNGC	9 cut(s)	333, 636, 1040, 1224, 1813, 2050, 2184, 2501, 3258
HaeII	RGCGCY	3 cut(s)	702, 1928, 2143
HapII	CCGG	7 cut(s)	770, 921, 1350, 2267, 3048, 3075, 3214
HgaI	GACGC	2 cut(s)	1070, 2210
HhaI	GCGC	5 cut(s)	701, 1790, 1817, 1927, 2142
Hin1I	GRCGYC	1 cut(s)	2202
Hin6I	GCGC	5 cut(s)	699, 1788, 1815, 1925, 2140
HinP1I	GCGC	5 cut(s)	699, 1788, 1815, 1925, 2140
HincII	GTYRAC	1 cut(s)	664
HindII	GTYRAC	1 cut(s)	664
HpaII	CCGG	7 cut(s)	770, 921, 1350, 2267, 3048, 3075, 3214
HphI	GGTGA	4 cut(s)	793, 2281, 2650, 3353
Hpy166II	GTNNAC	8 cut(s)	664, 825, 1295, 1503, 1882, 2200, 2807, 2964
Hpy8I	GTNNAC	8 cut(s)	664, 825, 1295, 1503, 1882, 2200, 2807, 2964
Hpy99I	CGWCG	5 cut(s)	505, 2081, 2179, 2182, 2198
HpyCH4III	ACNGT	4 cut(s)	1375, 2591, 2961, 3162
HpyCH4IV	ACGT	3 cut(s)	585, 2115, 2196
HpyF10VI	GCNNNNNNNGC	9 cut(s)	425, 620, 863, 1777, 1818, 2825, 2940, 3058, 3333
HpySE526I	ACGT	3 cut(s)	585, 2115, 2196
Hsp92I	GRCGYC	1 cut(s)	2202
HspAI	GCGC	5 cut(s)	699, 1788, 1815, 1925, 2140
Kpn2I	TCCGGA	2 cut(s)	920, 1349
Kzo9I	GATC	7 cut(s)	148, 2147, 2494, 3176, 3378, 3391, 3395
LguI	GCTCTTC	3 cut(s)	300, 2088, 2723
Lsp1109I	GCAGC	4 cut(s)	319, 1051, 2170, 3269
MaeI	CTAG	5 cut(s)	224, 1380, 2970, 3264, 3333
MaeII	ACGT	3 cut(s)	585, 2115, 2196
MaeIII	GTNAC	3 cut(s)	781, 2317, 3085
MalI	GATC	7 cut(s)	150, 2149, 2496, 3178, 3380, 3393, 3397
MbiI	CCGCTC	2 cut(s)	1487, 2158
MboI	GATC	7 cut(s)	148, 2147, 2494, 3176, 3378, 3391, 3395
MfeI	CAATTG	3 cut(s)	2477, 3280, 3351
MflI	RGATCY	1 cut(s)	2147
MhlI	GDGCHC	9 cut(s)	218, 645, 1624, 1705, 1869, 2044, 2735, 3054, 3160
MlsI	TGGCCA	1 cut(s)	1401
MluNI	TGGCCA	1 cut(s)	1401
MlyI	GAGTC	5 cut(s)	830, 1974, 2066, 2230, 3025
MmeI	TCCRAC	5 cut(s)	455, 1459, 2094, 2100, 3144
Mox20I	TGGCCA	1 cut(s)	1401
MroI	TCCGGA	2 cut(s)	920, 1349
MroXI	GAANNNNTTC	2 cut(s)	765, 2543
MscI	TGGCCA	1 cut(s)	1401
MslI	CAYNNNNRTG	5 cut(s)	834, 858, 1137, 1440, 3125
Msp20I	TGGCCA	1 cut(s)	1401
MspA1I	CMGCKG	2 cut(s)	1042, 2500
MspI	CCGG	7 cut(s)	770, 921, 1350, 2267, 3048, 3075, 3214
MspR9I	CCNGG	7 cut(s)	569, 1322, 1829, 2245, 2736, 3049, 3076
MunI	CAATTG	3 cut(s)	2477, 3280, 3351
Mva1269I	GAATGC	3 cut(s)	388, 1028, 2862
MvaI	CCWGG	5 cut(s)	569, 1322, 1829, 2245, 2736
MvnI	CGCG	3 cut(s)	1815, 1817, 2052
MwoI	GCNNNNNNNGC	9 cut(s)	425, 620, 863, 1777, 1818, 2825, 2940, 3058, 3333
NciI	CCSGG	2 cut(s)	3049, 3076
NcoI	CCATGG	2 cut(s)	786, 1132
NdeII	GATC	7 cut(s)	148, 2147, 2494, 3176, 3378, 3391, 3395
NheI	GCTAGC	1 cut(s)	3332
NlaIV	GGNNCC	8 cut(s)	498, 1483, 1866, 2164, 2443, 3053, 3168, 3287
NmeAIII	GCCGAG	3 cut(s)	2179, 2494, 3019
NmuCI	GTSAC	1 cut(s)	781
NspI	RCATGY	3 cut(s)	1198, 1501, 3007
PaeR7I	CTCGAG	2 cut(s)	1201, 2060
PagI	TCATGA	1 cut(s)	724
PciI	ACATGT	1 cut(s)	1497
PciSI	GCTCTTC	3 cut(s)	300, 2088, 2723
PcsI	WCGNNNNNNNCGW	2 cut(s)	2067, 3400
PctI	GAATGC	3 cut(s)	388, 1028, 2862
PdmI	GAANNNNTTC	2 cut(s)	765, 2543
PfeI	GAWTC	8 cut(s)	238, 572, 578, 917, 1166, 2254, 2263, 2693
PfoI	TCCNGGA	2 cut(s)	1827, 2243
PkrI	GCNGC	9 cut(s)	334, 637, 1041, 1225, 1814, 2051, 2185, 2502, 3259
Ple19I	CGATCG	1 cut(s)	3394
PleI	GAGTC	5 cut(s)	829, 1974, 2066, 2229, 3024
PpsI	GAGTC	5 cut(s)	829, 1974, 2066, 2229, 3024
PpuMI	RGGWCCY	1 cut(s)	3250
PscI	ACATGT	1 cut(s)	1497
Psp124BI	GAGCTC	4 cut(s)	218, 645, 1624, 2044
Psp5II	RGGWCCY	1 cut(s)	3250
Psp6I	CCWGG	5 cut(s)	567, 1320, 1827, 2243, 2734
PspEI	GGTNACC	1 cut(s)	781
PspGI	CCWGG	5 cut(s)	567, 1320, 1827, 2243, 2734
PspN4I	GGNNCC	8 cut(s)	498, 1483, 1866, 2164, 2443, 3053, 3168, 3287
PspPI	GGNCC	6 cut(s)	565, 2442, 2791, 3166, 3250, 3269
PspPPI	RGGWCCY	1 cut(s)	3250
PspXI	VCTCGAGB	2 cut(s)	1201, 2060
PstI	CTGCAG	1 cut(s)	625
PstNI	CAGNNNCTG	2 cut(s)	103, 1018
PsuI	RGATCY	1 cut(s)	2147
PvuI	CGATCG	1 cut(s)	3394
RseI	CAYNNNNRTG	5 cut(s)	834, 858, 1137, 1440, 3125
SacI	GAGCTC	4 cut(s)	218, 645, 1624, 2044
SapI	GCTCTTC	3 cut(s)	300, 2088, 2723
SatI	GCNGC	9 cut(s)	333, 636, 1040, 1224, 1813, 2050, 2184, 2501, 3258
Sau3AI	GATC	7 cut(s)	148, 2147, 2494, 3176, 3378, 3391, 3395
Sau96I	GGNCC	6 cut(s)	565, 2442, 2791, 3166, 3250, 3269
ScaI	AGTACT	1 cut(s)	289
SchI	GAGTC	5 cut(s)	830, 1974, 2066, 2230, 3025
ScrFI	CCNGG	7 cut(s)	569, 1322, 1829, 2245, 2736, 3049, 3076
SduI	GDGCHC	9 cut(s)	218, 645, 1624, 1705, 1869, 2044, 2735, 3054, 3160
SfcI	CTRYAG	1 cut(s)	621
Sfr274I	CTCGAG	2 cut(s)	1201, 2060
SinI	GGWCC	3 cut(s)	3166, 3250, 3269
SlaI	CTCGAG	2 cut(s)	1201, 2060
SmiMI	CAYNNNNRTG	5 cut(s)	834, 858, 1137, 1440, 3125
SmlI	CTYRAG	5 cut(s)	1201, 2060, 2210, 2225, 3304
SmoI	CTYRAG	5 cut(s)	1201, 2060, 2210, 2225, 3304
SspI	AATATT	1 cut(s)	1736
SspMI	CTAG	5 cut(s)	224, 1380, 2970, 3264, 3333
SstI	GAGCTC	4 cut(s)	218, 645, 1624, 2044
StyD4I	CCNGG	7 cut(s)	567, 1320, 1827, 2243, 2734, 3047, 3074
StyI	CCWWGG	5 cut(s)	786, 1117, 1132, 2969, 3289
TaaI	ACNGT	4 cut(s)	1375, 2591, 2961, 3162
TaiI	ACGT	3 cut(s)	588, 2118, 2199
TaqII	GACCGA	2 cut(s)	11, 2686
TatI	WGTACW	6 cut(s)	129, 287, 1197, 1294, 1500, 2580
TauI	GCSGC	5 cut(s)	638, 1226, 1815, 2052, 2503
TfiI	GAWTC	8 cut(s)	238, 572, 578, 917, 1166, 2254, 2263, 2693
TscAI	CASTG	9 cut(s)	108, 216, 1378, 1790, 2554, 2629, 2757, 3329, 3343
TseFI	GTSAC	1 cut(s)	781
TseI	GCWGC	4 cut(s)	332, 1039, 2183, 3257
Tsp45I	GTSAC	1 cut(s)	781
TspGWI	ACGGA	2 cut(s)	489, 1905
TspRI	CASTG	9 cut(s)	108, 216, 1378, 1790, 2554, 2629, 2757, 3329, 3343
VpaK11BI	GGWCC	3 cut(s)	3166, 3250, 3269
XapI	RAATTY	8 cut(s)	1273, 1933, 1940, 2405, 2767, 2878, 2917, 2950
XceI	RCATGY	3 cut(s)	1198, 1501, 3007
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2310
XhoI	CTCGAG	2 cut(s)	1201, 2060
XmaJI	CCTAGG	1 cut(s)	2969
XmiI	GTMKAC	3 cut(s)	824, 2806, 2963
XmnI	GAANNNNTTC	2 cut(s)	765, 2543
XspI	CTAG	5 cut(s)	224, 1380, 2970, 3264, 3333
ZrmI	AGTACT	1 cut(s)	289

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.