Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0009824

Physical Location & Seq

Genomic Coordinates Forward (+)

3688368 .. 3695721

Gene Structure 7354 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00160770.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2133 bp

ATGAACTGGGCCTGTTCTATTGGTCTCTCTACAAAGCCTGGCCTTGTCTACTTCCACTCTCTTCTAAATTCTCACATTCAAACCAAAAATCCAAAACAAGCTTTACTGCTTTTTCGCCAGTTGTACGAGTACAATGTGAAACCCAATGATCTCACTTTCTCTTTGCTCCTAAAAGCTTGCACATCTTCTTCCTCATATTTAGATTCAGCTAATGCTGAAATAGAAGCGAACCAGATTCATACACACTTGATAAAATCGGGTGTTGACCGATTCGTATATGTGGGTACAGCTTTTCTTGATCTTTACATGAAATTGGGGCGTGTGGGAAATGCTCAGAAGCTGTTCGATGATATGCCTGAGAGAGACGATGTCTCTTGGAATGCACTGATTTGTGGGGTTTCGAGAAACGGTCGTCATTTCGAAGCGTTGGAACTCTTTGTTCAAATGTGTAGAGAGGGGTTTCGTCCTCGTCATACGACTTTGGTTAGTTTGGTACCGTCTTGTGGCAGGCATGAGTTGTCTTTTCAGGGCAAATCTGTTCATGGGTTTGGAATTAAGGCTGGCCTTGATTCGGATTTGCAAGTGAAGAATGCTCTTACTTCGATGTATGGTAAATGCGCAGATTTGGAAGCAGCAGAAGTCTTGTTTGAAGAGATTGGTGACAAGAGTCTGGTTTCTTGGAATACTATGATCGGTGCATATGGCCAAAATGGTTGCTTTGATGAGGCAGTGCTTGTGTTTAAACGAATGCGAGAGGAAAATGTGCAAGCCAATCTGGTGACCATGGTAAGCCTTCTGTCAGCAAATGCCGGTCCAGAGTCTGCTCATTGTCATGCCATTAAGACTGGTCTTGTAAATAATGCTTCTGTGATTACTTCGCTGATTTGTGAATATGCAACGCGCGGCAACACAGAATCCGGAGAACTGCTTTACAAATCATTGCCTCAGAAGAGTTTGGTTTCCCTAACAGCACTTATTTCAAGTTATTCTGAGAAAGGTAACCTGGGCCAGCTGATGGAGTGTTTTGCTCACTTGCAGCAGTTAGACATGAAACTAGATGCAGTGGCTATGGTTAGCATCCTCCATGGGATAAAGCGTCCTGCTGACTTTGGCCTTGGACTTGCTTTCCATGGTTATGGATTGAAGACGGGGTTGACCGCTGATTCTTTGGTTGTAAATGGGTTGATAAGCATGTACTCAAGGTTTGACAAGATAGAGGATGCGTTTTCGTTATTCTCTAATATGGGTGAAAAACCATTGATTACTTGGAATTCTTTGATATCAGGCTGTGTTCAAGCTGGAAGGTCAAGTGATGCGCTGGAGTTGCTTTCTCAGATGAAAATGTCTGGACACAGTCCAGACTCCATTTCTGTCTCTAGTTTACTATCTGGGTGTTGCCAAATTGAGTACTTGAAATTTGGGGAGGGACTTCATACTTATGCACTAAGAAACAACTTCGAAGGAGAAGATTTTGTTGGAACTGCTCTTATAGACATGTACACCAAGTGTGGAAGAATAGACCGTGCTGAAAGGGTGTTCAAGAGTATAAAAGAGCCATGCTTGGCAACATGGAACTCAATGATCTCAGGTTATAGCTTATACGGGTTAGAAAATAAAGCTCTTGATCGCTTCTCCGAAATGCAAGAACGAGGGCTAAAGCCTGATAAAATCACCTTTTTAGGAGTATTAGCTGCTTGTACGCATGGAGGTCTTGTTCAGGAAGGAAGAACATATTTCCAAATGATGAAGGAAAAGTTCAACCTGATGCCAAGCTTGCAACACTGTGCTTGCATGGTCAATCTCTTTGGTCGTGCCGGTTTGTTGGACGAGGCATTGATGTTTATTGGGGACATGGAAATAGACCCTGATTTTGCAGTTTGGGGAGCTTTGCTCAATGCTTGTTGCATTCATCAAGACGTGAATCTTGGGGAATACACAGCCAAAAAGTTGTTCTTCTTGGACAGTAAAAATGCCGGCTTCCTCGTGTTGATGTCGAATCTCTACGCAATCAAAAGAAGGTGGGAAGATGTAGCAAGAGTGAGGGAGATGATGAGAGAGACTGGAGGTGATGGATGTTCAGGAATTAGTGTCATTGAGCAAGTGAGCAGGCCATATGATGGGCTTACACATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009507 GO:0009536 GO:0009987 GO:0010467 GO:0016070 GO:0016787 GO:0016788 GO:0031425 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1900865 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko00500 ko01100 ko04973 map00500 map01100 map04973

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

710

Amino Acids

78.51

Weight (kDa)

6.05

Isoelectric Point (pI)

34.64

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	14 - 60	2.9e-06	PPR repeat family
PPR_2	PF13041	122 - 165	1.2e-06	PPR repeat family
PPR	PF01535	124 - 154	4.8e-07	PPR repeat
PPR_2	PF13041	223 - 268	2.8e-09	PPR repeat family
PPR	PF01535	225 - 255	8.7e-10	PPR repeat
PPR_2	PF13041	421 - 467	8.7e-13	PPR repeat family
PPR	PF01535	421 - 450	4.5e-08	PPR repeat
PPR_2	PF13041	519 - 566	4.6e-09	PPR repeat family
PPR	PF01535	523 - 552	3.8e-06	PPR repeat
E_motif	PF20431	637 - 699	2.3e-14	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009824)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G04860
fragaria_vesca	FvH4_2g34460
malus_domestica	MD15G1083200.v1.1
prunus_persica	Prupe.1G435700_v2.0.a1 Prupe.1G435700_v2.0.a1 Prupe.1G435700_v2.0.a1 Prupe.1G435700_v2.0.a1 Prupe.1G435700_v2.0.a1 Prupe.1G435700_v2.0.a1
pyrus_communis	pycom15g07770
rosa_chinensis	RchiOBHm_Chr6g0307911
rosa_laevigata	RLG00000010687
rosa_multiflora	Rmu_sc0003252.1_g000018 Rmu_sc0032565.1_g000001
rosa_roxburghii	Rroxscaffold_7G00160770
rosa_rugosa	Rorug06G0361600
rosa_samantha	Rh6AG470700 Rh6BG481700 Rh6CG487100 Rh6DG473200
rosa_wichuraiana	Rw6G041100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	619
Acc65I	GGTACC	1 cut(s)	493
AccB1I	GGYRCC	1 cut(s)	493
AccB7I	CCANNNNNTGG	2 cut(s)	1015, 2117
AccI	GTMKAC	1 cut(s)	48
AccII	CGCG	2 cut(s)	901, 903
AccIII	TCCGGA	1 cut(s)	917
AciI	CCGC	2 cut(s)	903, 1158
AcoI	YGGCCR	1 cut(s)	703
AcsI	RAATTY	3 cut(s)	67, 1270, 1415
AdeI	CACNNNGTG	1 cut(s)	1506
AfaI	GTAC	8 cut(s)	125, 131, 286, 495, 1196, 1409, 1499, 1699
AfiI	CCNNNNNNNGG	4 cut(s)	503, 571, 1015, 2117
AflIII	ACRYGT	1 cut(s)	1494
AgsI	TTSAA	9 cut(s)	80, 443, 650, 981, 1144, 1295, 1414, 1540, 1759
AjiI	CACGTC	1 cut(s)	1918
AjnI	CCWGG	2 cut(s)	37, 1002
AjuI	GAANNNNNNNTTGG	4 cut(s)	1458, 1490, 1934, 1966
AloI	GAACNNNNNNTCC	2 cut(s)	1698, 1730
Alw26I	GTCTC	5 cut(s)	29, 357, 376, 1378, 2051
AlwNI	CAGNNNCTG	2 cut(s)	340, 821
Aor13HI	TCCGGA	1 cut(s)	917
AoxI	GGCC	7 cut(s)	9, 40, 562, 703, 1006, 1111, 2108
ApeKI	GCWGC	3 cut(s)	632, 1036, 1691
ApoI	RAATTY	3 cut(s)	67, 1270, 1415
ArsI	GACNNNNNNTTYG	2 cut(s)	1853, 1885
Asp700I	GAANNNNTTC	1 cut(s)	341
Asp718I	GGTACC	1 cut(s)	493
AspLEI	GCGC	3 cut(s)	620, 903, 1318
AspS9I	GGNCC	3 cut(s)	9, 812, 1006
AsuHPI	GGTGA	5 cut(s)	671, 790, 1259, 1663, 2078
AsuII	TTCGAA	2 cut(s)	420, 1458
AvaII	GGWCC	1 cut(s)	812
BalI	TGGCCA	1 cut(s)	705
BanI	GGYRCC	1 cut(s)	493
BauI	CACGAG	1 cut(s)	1982
BbsI	GAAGAC	1 cut(s)	1151
BbvI	GCAGC	3 cut(s)	644, 1048, 1678
BccI	CCATC	3 cut(s)	1009, 2063, 2111
BciT130I	CCWGG	2 cut(s)	39, 1004
BcoDI	GTCTC	5 cut(s)	29, 357, 376, 1378, 2051
BfaI	CTAG	2 cut(s)	1055, 1377
BisI	GCNGC	4 cut(s)	633, 904, 1037, 1692
BlsI	GCNGC	4 cut(s)	634, 905, 1038, 1693
BmcAI	AGTACT	1 cut(s)	1409
Bme1390I	CCNGG	2 cut(s)	39, 1004
Bme18I	GGWCC	1 cut(s)	812
BmgBI	CACGTC	1 cut(s)	1918
BmgT120I	GGNCC	3 cut(s)	9, 812, 1006
BmiI	GGNNCC	1 cut(s)	495
BmrFI	CCNGG	2 cut(s)	39, 1004
BmrI	ACTGGG	1 cut(s)	16
BmsI	GCATC	5 cut(s)	1048, 1086, 1210, 1303, 1755
BmuI	ACTGGG	1 cut(s)	16
BoxI	GACNNNNGTC	1 cut(s)	666
BpiI	GAAGAC	1 cut(s)	1151
BplI	GAGNNNNNCTC	2 cut(s)	1875, 1907
BpmI	CTGGAG	2 cut(s)	1340, 2082
Bpu14I	TTCGAA	2 cut(s)	420, 1458
BpuEI	CTTGAG	1 cut(s)	1183
BsaI	GGTCTC	1 cut(s)	29
BsaJI	CCNNGG	5 cut(s)	783, 1003, 1084, 1114, 1129
BsaWI	WCCGGW	1 cut(s)	917
BsaXI	ACNNNNNCTCC	2 cut(s)	1698, 1728
Bsc4I	CCNNNNNNNGG	4 cut(s)	503, 571, 1015, 2117
Bse118I	RCCGGY	3 cut(s)	809, 1814, 1973
Bse1I	ACTGG	4 cut(s)	11, 118, 850, 2065
Bse3DI	GCAATG	1 cut(s)	938
BseAI	TCCGGA	1 cut(s)	917
BseBI	CCWGG	2 cut(s)	39, 1004
BseDI	CCNNGG	5 cut(s)	783, 1003, 1084, 1114, 1129
BseGI	GGATG	3 cut(s)	1077, 1225, 2078
BseLI	CCNNNNNNNGG	4 cut(s)	503, 571, 1015, 2117
BseMI	GCAATG	1 cut(s)	938
BseMII	CTCAG	6 cut(s)	347, 348, 959, 981, 1346, 1599
BseNI	ACTGG	4 cut(s)	11, 118, 850, 2065
BseXI	GCAGC	3 cut(s)	644, 1048, 1678
Bsh1236I	CGCG	2 cut(s)	901, 903
Bsh1285I	CGRYCG	1 cut(s)	412
BshFI	GGCC	7 cut(s)	11, 42, 564, 705, 1008, 1113, 2110
BshNI	GGYRCC	1 cut(s)	493
BsiEI	CGRYCG	1 cut(s)	412
BsiSI	CCGG	4 cut(s)	810, 918, 1815, 1974
BslFI	GGGAC	2 cut(s)	1440, 1862
BslI	CCNNNNNNNGG	4 cut(s)	503, 571, 1015, 2117
BsmAI	GTCTC	5 cut(s)	29, 357, 376, 1378, 2051
BsmBI	CGTCTC	1 cut(s)	357
BsmFI	GGGAC	2 cut(s)	1440, 1862
BsmI	GAATGC	4 cut(s)	385, 595, 753, 1905
BsnI	GGCC	7 cut(s)	11, 42, 564, 705, 1008, 1113, 2110
Bso31I	GGTCTC	1 cut(s)	29
Bsp119I	TTCGAA	2 cut(s)	420, 1458
Bsp13I	TCCGGA	1 cut(s)	917
Bsp1407I	TGTACA	1 cut(s)	1497
Bsp143I	GATC	5 cut(s)	148, 298, 690, 1581, 1624
Bsp19I	CCATGG	3 cut(s)	783, 1084, 1129
BspACI	CCGC	2 cut(s)	903, 1158
BspANI	GGCC	7 cut(s)	11, 42, 564, 705, 1008, 1113, 2110
BspCNI	CTCAG	6 cut(s)	346, 349, 958, 982, 1345, 1598
BspEI	TCCGGA	1 cut(s)	917
BspFNI	CGCG	2 cut(s)	901, 903
BspLI	GGNNCC	1 cut(s)	495
BspT104I	TTCGAA	2 cut(s)	420, 1458
BspT107I	GGYRCC	1 cut(s)	493
BspTNI	GGTCTC	1 cut(s)	29
BsrDI	GCAATG	1 cut(s)	938
BsrFI	RCCGGY	3 cut(s)	809, 1814, 1973
BsrGI	TGTACA	1 cut(s)	1497
BsrI	ACTGG	4 cut(s)	11, 118, 850, 2065
BssAI	RCCGGY	3 cut(s)	809, 1814, 1973
BssECI	CCNNGG	5 cut(s)	783, 1003, 1084, 1114, 1129
BssMI	GATC	5 cut(s)	148, 298, 690, 1581, 1624
BssSI	CACGAG	1 cut(s)	1982
BssT1I	CCWWGG	4 cut(s)	783, 1084, 1114, 1129
Bst2BI	CACGAG	1 cut(s)	1982
Bst2UI	CCWGG	2 cut(s)	39, 1004
Bst4CI	ACNGT	6 cut(s)	410, 498, 1355, 1523, 1784, 1964
Bst6I	CTCTTC	3 cut(s)	66, 645, 944
BstAUI	TGTACA	1 cut(s)	1497
BstBI	TTCGAA	2 cut(s)	420, 1458
BstC8I	GCNNGC	9 cut(s)	178, 509, 562, 768, 1010, 1775, 1789, 1975, 2108
BstDEI	CTNAG	7 cut(s)	333, 357, 945, 990, 1332, 1445, 1585
BstDSI	CCRYGG	3 cut(s)	783, 1084, 1129
BstEII	GGTNACC	2 cut(s)	778, 998
BstF5I	GGATG	3 cut(s)	1077, 1225, 2078
BstFNI	CGCG	2 cut(s)	901, 903
BstHHI	GCGC	3 cut(s)	620, 903, 1318
BstKTI	GATC	5 cut(s)	151, 301, 693, 1584, 1627
BstMAI	GTCTC	5 cut(s)	29, 357, 376, 1378, 2051
BstMBI	GATC	5 cut(s)	148, 298, 690, 1581, 1624
BstMCI	CGRYCG	1 cut(s)	412
BstMWI	GCNNNNNNNGC	2 cut(s)	1324, 1774
BstNI	CCWGG	2 cut(s)	39, 1004
BstNSI	RCATGY	2 cut(s)	1195, 1498
BstPAI	GACNNNNGTC	1 cut(s)	666
BstPI	GGTNACC	2 cut(s)	778, 998
BstSCI	CCNGG	2 cut(s)	37, 1002
BstUI	CGCG	2 cut(s)	901, 903
BstV1I	GCAGC	3 cut(s)	644, 1048, 1678
BstV2I	GAAGAC	1 cut(s)	1151
BstXI	CCANNNNNNTGG	1 cut(s)	1136
BsuRI	GGCC	7 cut(s)	11, 42, 564, 705, 1008, 1113, 2110
BtgI	CCRYGG	3 cut(s)	783, 1084, 1129
BtrI	CACGTC	1 cut(s)	1918
BtsCI	GGATG	3 cut(s)	1077, 1225, 2078
BtsI	GCAGTG	2 cut(s)	735, 1068
BtsIMutI	CAGTG	4 cut(s)	383, 735, 1068, 1780
Cac8I	GCNNGC	9 cut(s)	178, 509, 562, 768, 1010, 1775, 1789, 1975, 2108
CaiI	CAGNNNCTG	2 cut(s)	340, 821
CfoI	GCGC	3 cut(s)	620, 903, 1318
Cfr10I	RCCGGY	3 cut(s)	809, 1814, 1973
Cfr13I	GGNCC	3 cut(s)	9, 812, 1006
CseI	GACGC	1 cut(s)	1085
Csp6I	GTAC	8 cut(s)	124, 130, 285, 494, 1195, 1408, 1498, 1698
CviQI	GTAC	8 cut(s)	124, 130, 285, 494, 1195, 1408, 1498, 1698
DdeI	CTNAG	7 cut(s)	333, 357, 945, 990, 1332, 1445, 1585
DpnI	GATC	5 cut(s)	150, 300, 692, 1583, 1626
DpnII	GATC	5 cut(s)	148, 298, 690, 1581, 1624
DraI	TTTAAA	1 cut(s)	742
DraIII	CACNNNGTG	1 cut(s)	1506
EaeI	YGGCCR	1 cut(s)	703
Eam1104I	CTCTTC	3 cut(s)	66, 645, 944
EarI	CTCTTC	3 cut(s)	66, 645, 944
Eco130I	CCWWGG	4 cut(s)	783, 1084, 1114, 1129
Eco31I	GGTCTC	1 cut(s)	29
Eco32I	GATATC	1 cut(s)	1281
Eco47I	GGWCC	1 cut(s)	812
Eco91I	GGTNACC	2 cut(s)	778, 998
EcoO65I	GGTNACC	2 cut(s)	778, 998
EcoRI	GAATTC	1 cut(s)	1270
EcoRII	CCWGG	2 cut(s)	37, 1002
EcoRV	GATATC	1 cut(s)	1281
EcoT14I	CCWWGG	4 cut(s)	783, 1084, 1114, 1129
ErhI	CCWWGG	4 cut(s)	783, 1084, 1114, 1129
Esp3I	CGTCTC	1 cut(s)	357
FalI	AAGNNNNNCTT	2 cut(s)	1937, 1969
FaqI	GGGAC	2 cut(s)	1440, 1862
FauNDI	CATATG	2 cut(s)	700, 2113
FblI	GTMKAC	1 cut(s)	48
Fnu4HI	GCNGC	4 cut(s)	633, 904, 1037, 1692
FokI	GGATG	3 cut(s)	1064, 1232, 2085
Fsp4HI	GCNGC	4 cut(s)	633, 904, 1037, 1692
FspBI	CTAG	2 cut(s)	1055, 1377
FspI	TGCGCA	1 cut(s)	619
GlaI	GCGC	3 cut(s)	619, 902, 1317
GluI	GCNGC	4 cut(s)	633, 904, 1037, 1692
GsuI	CTGGAG	2 cut(s)	1340, 2082
HaeIII	GGCC	7 cut(s)	11, 42, 564, 705, 1008, 1113, 2110
HapII	CCGG	4 cut(s)	810, 918, 1815, 1974
HgaI	GACGC	1 cut(s)	1085
HhaI	GCGC	3 cut(s)	620, 903, 1318
Hin6I	GCGC	3 cut(s)	618, 901, 1316
HinP1I	GCGC	3 cut(s)	618, 901, 1316
HincII	GTYRAC	2 cut(s)	265, 1155
HindII	GTYRAC	2 cut(s)	265, 1155
HindIII	AAGCTT	3 cut(s)	99, 174, 1771
HpaII	CCGG	4 cut(s)	810, 918, 1815, 1974
HphI	GGTGA	5 cut(s)	671, 790, 1259, 1663, 2078
Hpy166II	GTNNAC	5 cut(s)	49, 265, 1155, 1382, 1500
Hpy188I	TCNGA	6 cut(s)	336, 574, 948, 991, 1335, 1636
Hpy8I	GTNNAC	5 cut(s)	49, 265, 1155, 1382, 1500
HpyAV	CCTTC	6 cut(s)	803, 1296, 1454, 1715, 1741, 2010
HpyCH4III	ACNGT	6 cut(s)	410, 498, 1355, 1523, 1784, 1964
HpyCH4IV	ACGT	1 cut(s)	1917
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1324, 1774
HpyF3I	CTNAG	7 cut(s)	333, 357, 945, 990, 1332, 1445, 1585
HpySE526I	ACGT	1 cut(s)	1917
HspAI	GCGC	3 cut(s)	618, 901, 1316
Kpn2I	TCCGGA	1 cut(s)	917
KpnI	GGTACC	1 cut(s)	497
KroI	GCCGGC	1 cut(s)	1973
KroNI	GCCGGC	1 cut(s)	1975
Kzo9I	GATC	5 cut(s)	148, 298, 690, 1581, 1624
LmnI	GCTCC	2 cut(s)	171, 1883
Lsp1109I	GCAGC	3 cut(s)	644, 1048, 1678
LweI	GCATC	5 cut(s)	1048, 1086, 1210, 1303, 1755
MaeI	CTAG	2 cut(s)	1055, 1377
MaeII	ACGT	1 cut(s)	1917
MaeIII	GTNAC	3 cut(s)	659, 778, 998
MalI	GATC	5 cut(s)	150, 300, 692, 1583, 1626
MboI	GATC	5 cut(s)	148, 298, 690, 1581, 1624
MlsI	TGGCCA	1 cut(s)	705
MluCI	AATT	7 cut(s)	67, 311, 552, 1270, 1401, 1415, 2082
MluNI	TGGCCA	1 cut(s)	705
MlyI	GAGTC	3 cut(s)	676, 827, 1355
MmeI	TCCRAC	3 cut(s)	408, 1456, 1803
Mox20I	TGGCCA	1 cut(s)	705
MroI	TCCGGA	1 cut(s)	917
MroNI	GCCGGC	1 cut(s)	1973
MroXI	GAANNNNTTC	1 cut(s)	341
MscI	TGGCCA	1 cut(s)	705
MseI	TTAA	4 cut(s)	555, 741, 840, 2131
MslI	CAYNNNNRTG	3 cut(s)	831, 1134, 1437
Msp20I	TGGCCA	1 cut(s)	705
MspA1I	CMGCKG	2 cut(s)	1012, 1160
MspI	CCGG	4 cut(s)	810, 918, 1815, 1974
MspR9I	CCNGG	2 cut(s)	39, 1004
MssI	GTTTAAAC	1 cut(s)	742
Mva1269I	GAATGC	4 cut(s)	385, 595, 753, 1905
MvaI	CCWGG	2 cut(s)	39, 1004
MvnI	CGCG	2 cut(s)	901, 903
MwoI	GCNNNNNNNGC	2 cut(s)	1324, 1774
NaeI	GCCGGC	1 cut(s)	1975
NcoI	CCATGG	3 cut(s)	783, 1084, 1129
NdeI	CATATG	2 cut(s)	700, 2113
NdeII	GATC	5 cut(s)	148, 298, 690, 1581, 1624
NgoMIV	GCCGGC	1 cut(s)	1973
NlaIV	GGNNCC	1 cut(s)	495
NmuCI	GTSAC	2 cut(s)	659, 778
NsbI	TGCGCA	1 cut(s)	619
NspI	RCATGY	2 cut(s)	1195, 1498
NspV	TTCGAA	2 cut(s)	420, 1458
PciI	ACATGT	1 cut(s)	1494
PctI	GAATGC	4 cut(s)	385, 595, 753, 1905
PdiI	GCCGGC	1 cut(s)	1975
PdmI	GAANNNNTTC	1 cut(s)	341
PfeI	GAWTC	8 cut(s)	203, 235, 270, 569, 914, 1163, 1921, 1996
PflFI	GACNNNGTC	2 cut(s)	368, 1353
PflMI	CCANNNNNTGG	2 cut(s)	1015, 2117
PkrI	GCNGC	4 cut(s)	634, 905, 1038, 1693
PleI	GAGTC	3 cut(s)	675, 826, 1355
PmeI	GTTTAAAC	1 cut(s)	742
PpsI	GAGTC	3 cut(s)	675, 826, 1355
PscI	ACATGT	1 cut(s)	1494
PshAI	GACNNNNGTC	1 cut(s)	666
Psp6I	CCWGG	2 cut(s)	37, 1002
PspEI	GGTNACC	2 cut(s)	778, 998
PspGI	CCWGG	2 cut(s)	37, 1002
PspN4I	GGNNCC	1 cut(s)	495
PspPI	GGNCC	3 cut(s)	9, 812, 1006
PstNI	CAGNNNCTG	2 cut(s)	340, 821
PsyI	GACNNNGTC	2 cut(s)	368, 1353
PvuII	CAGCTG	1 cut(s)	1012
RsaI	GTAC	8 cut(s)	125, 131, 286, 495, 1196, 1409, 1499, 1699
RsaNI	GTAC	8 cut(s)	124, 130, 285, 494, 1195, 1408, 1498, 1698
RseI	CAYNNNNRTG	3 cut(s)	831, 1134, 1437
SaqAI	TTAA	4 cut(s)	555, 741, 840, 2131
SatI	GCNGC	4 cut(s)	633, 904, 1037, 1692
Sau3AI	GATC	5 cut(s)	148, 298, 690, 1581, 1624
Sau96I	GGNCC	3 cut(s)	9, 812, 1006
ScaI	AGTACT	1 cut(s)	1409
SchI	GAGTC	3 cut(s)	676, 827, 1355
ScrFI	CCNGG	2 cut(s)	39, 1004
SfaNI	GCATC	5 cut(s)	1048, 1086, 1210, 1303, 1755
SfuI	TTCGAA	2 cut(s)	420, 1458
SinI	GGWCC	1 cut(s)	812
SmiMI	CAYNNNNRTG	3 cut(s)	831, 1134, 1437
SmlI	CTYRAG	1 cut(s)	1198
SmoI	CTYRAG	1 cut(s)	1198
Sse9I	AATT	7 cut(s)	67, 311, 552, 1270, 1401, 1415, 2082
SsiI	CCGC	2 cut(s)	903, 1158
SspMI	CTAG	2 cut(s)	1055, 1377
StyD4I	CCNGG	2 cut(s)	37, 1002
StyI	CCWWGG	4 cut(s)	783, 1084, 1114, 1129
TaaI	ACNGT	6 cut(s)	410, 498, 1355, 1523, 1784, 1964
TaiI	ACGT	1 cut(s)	1920
TaqI	TCGA	6 cut(s)	345, 401, 420, 602, 1458, 1994
TaqII	GACCGA	1 cut(s)	282
TasI	AATT	7 cut(s)	67, 311, 552, 1270, 1401, 1415, 2082
TatI	WGTACW	4 cut(s)	129, 1194, 1407, 1497
TauI	GCSGC	1 cut(s)	906
TfiI	GAWTC	8 cut(s)	203, 235, 270, 569, 914, 1163, 1921, 1996
Tru1I	TTAA	4 cut(s)	555, 741, 840, 2131
Tru9I	TTAA	4 cut(s)	555, 741, 840, 2131
TscAI	CASTG	4 cut(s)	390, 735, 1068, 1787
TseFI	GTSAC	2 cut(s)	659, 778
TseI	GCWGC	3 cut(s)	632, 1036, 1691
Tsp45I	GTSAC	2 cut(s)	659, 778
TspDTI	ATGAA	9 cut(s)	17, 227, 323, 530, 1064, 1352, 1421, 1760, 1898
TspRI	CASTG	4 cut(s)	390, 735, 1068, 1787
Tth111I	GACNNNGTC	2 cut(s)	368, 1353
Van91I	CCANNNNNTGG	2 cut(s)	1015, 2117
VpaK11BI	GGWCC	1 cut(s)	812
XapI	RAATTY	3 cut(s)	67, 1270, 1415
XceI	RCATGY	2 cut(s)	1195, 1498
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1263
XmiI	GTMKAC	1 cut(s)	48
XmnI	GAANNNNTTC	1 cut(s)	341
XspI	CTAG	2 cut(s)	1055, 1377
ZrmI	AGTACT	1 cut(s)	1409

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.