Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0009824

Physical Location & Seq

Genomic Coordinates Forward (+)

3655694 .. 3657799

Gene Structure 2106 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000010687

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2106 bp

ATGAACTGGGCCAGTTCTATTGGTCTCTCTACAAAGCCTGGCCTTGTCTACTTCCACTCTCTTCTAAATTCTCACATTCAAACCAAAAATCCAAAACAAGCTTTACTCCTTTTTCGCCAGTTGTACGAGTACAATGTGAAACCCAATGATCTCACTTTCTCTTTGCTCCTAAAAGCTTGCACATCTTCTTCCTCATATTTAAATTCAGCTAATGCTGAAATAGAAGCGAACCAGATTCATACACACTTGATAAAATCGGGTGGTGACCGATTCGTATATGTGGGTACAGCTCTTCTTGATCTTTACATGAAATTGGGGCGTGTGAGAAATGCTCAGAAGCTGTTCGATGATATGCCTGAGAGAGATGATGTCTCTTGGAATGCACTGATTTGTGGGGTTTCGAGAAACGGTCGTCATTTCGAAGCGTTGGAACTCTTTGTTCAAATGTGTAGAGAGGGATTTCGTCCTCGTCATACGACTTTGGTTAGTTTGGTACCGTCTTGTGGCAGGCATGGGTTGGCTTTTCAGGGGAAATCTGTTCATGGGTTTGGAATTAAGGCTGGCCTTGATTCGGATTCGCAAGTGAAGAATGCTCTTACTTCGATGTATGGTAAATGCGCAGATTTGGAAGCGGCAGAAGTCTTGTTTGAAGAGATTGGTGACAAGAGTGTGGTTTCTTGGAATACTATGATCGGTGCTTATGGCCATAATGGTTGCTTTGACGAGGCAATGCTTGTGTTTAAACGTATGCGAGAGGAAAATGTGCAAGCCAATCCGGTGACCGTGGTAAGCCTTCTGTCAGCAAATGCCGATCCAGAGTCTGCTCATTGTCATGCCATTAAGACTGGTCTTGTAAATAATGCTTCTGTGATTACTTCGCTGATTTGTGAATATGCAATGCGTGGCGACACAGAATCCGGAGAACTGCTTTACTTGTCATTGCCTCAGAAGACTTTAGTTTCCATAACTGCACTAATGTCTAGTTATGCGGAGAGAGGTAATATGGGTCAGGTGATGGAGTGTTTTGCTCACTTGCAGCAGTTAGACATGAAACTAGATGCAGTGGCTATGGTTAGCATTCTCCATGGGATAAAGCACCCTGCTGACTTTGGCCTTGGACTTGCTTTCCACGGTTATGGATTGAAGATGGGGTTGACCGCTGATTCTTTGGTCGTGAATGGGTTGCTAAGCATGTACTCAAGGTTTGACAATATAGAGGATGCGTTTTCCTTATTCTCCGAGATGCGTGAAAAACCATTGATTACTTGGAATTCTTTGATATCGGGCTGTGTGCGAGCTGGAAGGTCAAGTGATGCGCTGGAGTTGTTTTCTCAGATGAAAATGTCTGCACATAGTCCAGATTCCATTTCTATCTCTAGTTTACTCTCTGGGTGTTGCCAACTTGAGTACTTGAAATTTGGGCAGGGACTTCATACTTATGTACTAAGAAACAACTTTGAAGGGGAAGATTTTGTTGGAACTGCTCTTATAGACATGTACACCAAGTGTGGAAGAATAGACCAGGCTGAGAGGGTGTTCAAGAGTATAAAAGAGCCATGCTTGGCAACATGGAACTCAATGATCTCAGCTTATAGCTTATATGGTTTAGAACATAAGGCTCTTGTTTGCTTCTCTGAAATGCAACAAGGAGGGCTAAAGCCTGATAAAATCACCTTTTTAGGAGTATTAGCTGCTTGTACACATGGAGGTCTTGTTCAGGAAGGAAGAACATATTTCCAAATGATGAAGGAAAAGTTCAACCTGATGCCAAGTTTGCAACACTGTGCTTGCATGGTCAATCTCTTTGGTCGTGCCGCTTTGCTGGACGAGGCGTGGATGTTTATCAGGGACATGGAAATAGAGCCTGATTTCGCGGTTTGGGGAGCTTTGCTCAATGCTTGTTGCATCCATCAAGACGTGAAGCTTGGGGAATACATAGCCAAGAAGTTGTTCTTCTTGGACAGTAAAAATGCTGGTTTCCTCGTGTTGATGTCGAATCTTTACGCAGTTAAAACAAAGTGGGAAGATGTAGCAAGAGTGAGGGAGATGATGAGAGTGACTGGAGGTGATGGATGTTCAGGAATTAGTGTCATTGAGATCACTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009507 GO:0009536 GO:0009987 GO:0010467 GO:0016070 GO:0016787 GO:0016788 GO:0031425 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1900865 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko00500 ko01100 ko04973 map00500 map01100 map04973

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

702

Amino Acids

77.63

Weight (kDa)

6.17

Isoelectric Point (pI)

34.8

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	14 - 60	2.9e-06	PPR repeat family
PPR_2	PF13041	122 - 165	1.2e-06	PPR repeat family
PPR	PF01535	124 - 154	4.7e-07	PPR repeat
PPR_2	PF13041	223 - 268	6.3e-10	PPR repeat family
PPR	PF01535	225 - 255	1.2e-09	PPR repeat
PPR_2	PF13041	421 - 467	8e-13	PPR repeat family
PPR	PF01535	421 - 448	3.9e-08	PPR repeat
PPR_2	PF13041	519 - 566	9.9e-08	PPR repeat family
E_motif	PF20431	637 - 699	1.1e-12	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009824)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G04860
fragaria_vesca	FvH4_2g34460
malus_domestica	MD15G1083200.v1.1
prunus_persica	Prupe.1G435700_v2.0.a1 Prupe.1G435700_v2.0.a1 Prupe.1G435700_v2.0.a1 Prupe.1G435700_v2.0.a1 Prupe.1G435700_v2.0.a1 Prupe.1G435700_v2.0.a1
pyrus_communis	pycom15g07770
rosa_chinensis	RchiOBHm_Chr6g0307911
rosa_laevigata	RLG00000010687
rosa_multiflora	Rmu_sc0003252.1_g000018 Rmu_sc0032565.1_g000001
rosa_roxburghii	Rroxscaffold_7G00160770
rosa_rugosa	Rorug06G0361600
rosa_samantha	Rh6AG470700 Rh6BG481700 Rh6CG487100 Rh6DG473200
rosa_wichuraiana	Rw6G041100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	619
Acc65I	GGTACC	1 cut(s)	493
AccB1I	GGYRCC	1 cut(s)	493
AccI	GTMKAC	1 cut(s)	48
AccII	CGCG	1 cut(s)	1874
AccIII	TCCGGA	1 cut(s)	917
AciI	CCGC	5 cut(s)	632, 989, 1158, 1815, 1874
AclWI	GGATC	1 cut(s)	806
AcoI	YGGCCR	1 cut(s)	703
AcsI	RAATTY	4 cut(s)	67, 202, 1270, 1415
AdeI	CACNNNGTG	1 cut(s)	1506
AfaI	GTAC	9 cut(s)	125, 131, 286, 495, 1196, 1409, 1443, 1499, 1699
AfiI	CCNNNNNNNGG	2 cut(s)	503, 571
AflIII	ACRYGT	1 cut(s)	1494
AgsI	TTSAA	8 cut(s)	80, 443, 650, 1144, 1414, 1460, 1540, 1759
AjiI	CACGTC	1 cut(s)	1918
AjnI	CCWGG	2 cut(s)	37, 1521
AjuI	GAANNNNNNNTTGG	4 cut(s)	1458, 1490, 1934, 1966
AloI	GAACNNNNNNTCC	2 cut(s)	1698, 1730
Alw26I	GTCTC	2 cut(s)	29, 376
AlwI	GGATC	1 cut(s)	806
AlwNI	CAGNNNCTG	2 cut(s)	340, 821
Aor13HI	TCCGGA	1 cut(s)	917
AoxI	GGCC	5 cut(s)	9, 40, 562, 703, 1111
ApeKI	GCWGC	2 cut(s)	1036, 1691
ApoI	RAATTY	4 cut(s)	67, 202, 1270, 1415
Asp700I	GAANNNNTTC	2 cut(s)	341, 1949
Asp718I	GGTACC	1 cut(s)	493
AspLEI	GCGC	2 cut(s)	620, 1318
AspS9I	GGNCC	1 cut(s)	9
AsuHPI	GGTGA	6 cut(s)	275, 671, 790, 1024, 1663, 2078
AsuII	TTCGAA	1 cut(s)	420
BalI	TGGCCA	1 cut(s)	705
BanI	GGYRCC	1 cut(s)	493
BauI	CACGAG	1 cut(s)	1982
BbsI	GAAGAC	1 cut(s)	956
BbvI	GCAGC	2 cut(s)	1048, 1678
BccI	CCATC	4 cut(s)	1009, 1141, 1917, 2063
BciT130I	CCWGG	2 cut(s)	39, 1523
BcoDI	GTCTC	2 cut(s)	29, 376
BfaI	CTAG	3 cut(s)	981, 1055, 1377
BisI	GCNGC	4 cut(s)	633, 1037, 1692, 1815
BlpI	GCTNAGC	1 cut(s)	1187
BlsI	GCNGC	4 cut(s)	634, 1038, 1693, 1816
BmcAI	AGTACT	1 cut(s)	1409
Bme1390I	CCNGG	2 cut(s)	39, 1523
BmgBI	CACGTC	1 cut(s)	1918
BmgT120I	GGNCC	1 cut(s)	9
BmiI	GGNNCC	1 cut(s)	495
BmrFI	CCNGG	2 cut(s)	39, 1523
BmrI	ACTGGG	1 cut(s)	16
BmsI	GCATC	6 cut(s)	1048, 1210, 1233, 1303, 1755, 1914
BmuI	ACTGGG	1 cut(s)	16
BpiI	GAAGAC	1 cut(s)	956
BplI	GAGNNNNNCTC	4 cut(s)	316, 348, 1875, 1907
BpmI	CTGGAG	2 cut(s)	1340, 2082
Bpu1102I	GCTNAGC	1 cut(s)	1187
Bpu14I	TTCGAA	1 cut(s)	420
BpuEI	CTTGAG	2 cut(s)	1183, 1424
BsaBI	GATNNNNATC	1 cut(s)	1841
BsaI	GGTCTC	1 cut(s)	29
BsaJI	CCNNGG	4 cut(s)	783, 1084, 1114, 1129
BsaWI	WCCGGW	2 cut(s)	775, 917
BsaXI	ACNNNNNCTCC	2 cut(s)	1698, 1728
Bsc4I	CCNNNNNNNGG	2 cut(s)	503, 571
Bse1I	ACTGG	5 cut(s)	11, 12, 118, 850, 2065
Bse3DI	GCAATG	3 cut(s)	735, 903, 938
Bse8I	GATNNNNATC	1 cut(s)	1841
BseAI	TCCGGA	1 cut(s)	917
BseBI	CCWGG	2 cut(s)	39, 1523
BseDI	CCNNGG	4 cut(s)	783, 1084, 1114, 1129
BseGI	GGATG	4 cut(s)	1225, 1842, 1905, 2078
BseJI	GATNNNNATC	1 cut(s)	1841
BseLI	CCNNNNNNNGG	2 cut(s)	503, 571
BseMI	GCAATG	3 cut(s)	735, 903, 938
BseMII	CTCAG	6 cut(s)	347, 348, 959, 1346, 1518, 1599
BseNI	ACTGG	5 cut(s)	11, 12, 118, 850, 2065
BseXI	GCAGC	2 cut(s)	1048, 1678
BsgI	GTGCAG	2 cut(s)	954, 1332
Bsh1236I	CGCG	1 cut(s)	1874
Bsh1285I	CGRYCG	1 cut(s)	412
BshFI	GGCC	5 cut(s)	11, 42, 564, 705, 1113
BshNI	GGYRCC	1 cut(s)	493
BsiEI	CGRYCG	1 cut(s)	412
BsiSI	CCGG	2 cut(s)	776, 918
BslFI	GGGAC	2 cut(s)	1440, 1862
BslI	CCNNNNNNNGG	2 cut(s)	503, 571
BsmAI	GTCTC	2 cut(s)	29, 376
BsmFI	GGGAC	2 cut(s)	1440, 1862
BsmI	GAATGC	3 cut(s)	385, 595, 1077
BsnI	GGCC	5 cut(s)	11, 42, 564, 705, 1113
Bso31I	GGTCTC	1 cut(s)	29
Bsp119I	TTCGAA	1 cut(s)	420
Bsp13I	TCCGGA	1 cut(s)	917
Bsp1407I	TGTACA	2 cut(s)	1497, 1697
Bsp143I	GATC	6 cut(s)	148, 298, 690, 811, 1581, 2097
Bsp1720I	GCTNAGC	1 cut(s)	1187
Bsp19I	CCATGG	1 cut(s)	1084
BspACI	CCGC	5 cut(s)	632, 989, 1158, 1815, 1874
BspANI	GGCC	5 cut(s)	11, 42, 564, 705, 1113
BspCNI	CTCAG	6 cut(s)	346, 349, 958, 1345, 1519, 1598
BspEI	TCCGGA	1 cut(s)	917
BspFNI	CGCG	1 cut(s)	1874
BspLI	GGNNCC	1 cut(s)	495
BspPI	GGATC	1 cut(s)	806
BspQI	GCTCTTC	1 cut(s)	297
BspT104I	TTCGAA	1 cut(s)	420
BspT107I	GGYRCC	1 cut(s)	493
BspTNI	GGTCTC	1 cut(s)	29
BsrDI	GCAATG	3 cut(s)	735, 903, 938
BsrGI	TGTACA	2 cut(s)	1497, 1697
BsrI	ACTGG	5 cut(s)	11, 12, 118, 850, 2065
BssECI	CCNNGG	4 cut(s)	783, 1084, 1114, 1129
BssMI	GATC	6 cut(s)	148, 298, 690, 811, 1581, 2097
BssSI	CACGAG	1 cut(s)	1982
BssT1I	CCWWGG	2 cut(s)	1084, 1114
Bst2BI	CACGAG	1 cut(s)	1982
Bst2UI	CCWGG	2 cut(s)	39, 1523
Bst4CI	ACNGT	6 cut(s)	410, 498, 784, 1133, 1784, 1964
Bst6I	CTCTTC	3 cut(s)	66, 297, 645
BstAUI	TGTACA	2 cut(s)	1497, 1697
BstBI	TTCGAA	1 cut(s)	420
BstC8I	GCNNGC	6 cut(s)	178, 509, 562, 768, 1296, 1789
BstDEI	CTNAG	8 cut(s)	333, 357, 945, 1187, 1332, 1445, 1527, 1585
BstDSI	CCRYGG	3 cut(s)	783, 1084, 1129
BstEII	GGTNACC	2 cut(s)	263, 778
BstF5I	GGATG	4 cut(s)	1225, 1842, 1905, 2078
BstFNI	CGCG	1 cut(s)	1874
BstHHI	GCGC	2 cut(s)	620, 1318
BstKTI	GATC	6 cut(s)	151, 301, 693, 814, 1584, 2100
BstMAI	GTCTC	2 cut(s)	29, 376
BstMBI	GATC	6 cut(s)	148, 298, 690, 811, 1581, 2097
BstMCI	CGRYCG	1 cut(s)	412
BstMWI	GCNNNNNNNGC	1 cut(s)	1774
BstNI	CCWGG	2 cut(s)	39, 1523
BstNSI	RCATGY	2 cut(s)	1195, 1498
BstPI	GGTNACC	2 cut(s)	263, 778
BstSCI	CCNGG	2 cut(s)	37, 1521
BstUI	CGCG	1 cut(s)	1874
BstV1I	GCAGC	2 cut(s)	1048, 1678
BstV2I	GAAGAC	1 cut(s)	956
BstXI	CCANNNNNNTGG	1 cut(s)	1136
BsuRI	GGCC	5 cut(s)	11, 42, 564, 705, 1113
BtgI	CCRYGG	3 cut(s)	783, 1084, 1129
BtrI	CACGTC	1 cut(s)	1918
BtsCI	GGATG	4 cut(s)	1225, 1842, 1905, 2078
BtsI	GCAGTG	1 cut(s)	1068
BtsIMutI	CAGTG	3 cut(s)	383, 1068, 1780
Cac8I	GCNNGC	6 cut(s)	178, 509, 562, 768, 1296, 1789
CaiI	CAGNNNCTG	2 cut(s)	340, 821
CfoI	GCGC	2 cut(s)	620, 1318
Cfr13I	GGNCC	1 cut(s)	9
Csp6I	GTAC	9 cut(s)	124, 130, 285, 494, 1195, 1408, 1442, 1498, 1698
CviQI	GTAC	9 cut(s)	124, 130, 285, 494, 1195, 1408, 1442, 1498, 1698
DdeI	CTNAG	8 cut(s)	333, 357, 945, 1187, 1332, 1445, 1527, 1585
DpnI	GATC	6 cut(s)	150, 300, 692, 813, 1583, 2099
DpnII	GATC	6 cut(s)	148, 298, 690, 811, 1581, 2097
DraI	TTTAAA	2 cut(s)	201, 742
DraIII	CACNNNGTG	1 cut(s)	1506
EaeI	YGGCCR	1 cut(s)	703
Eam1104I	CTCTTC	3 cut(s)	66, 297, 645
EarI	CTCTTC	3 cut(s)	66, 297, 645
Eco130I	CCWWGG	2 cut(s)	1084, 1114
Eco31I	GGTCTC	1 cut(s)	29
Eco32I	GATATC	1 cut(s)	1281
Eco91I	GGTNACC	2 cut(s)	263, 778
EcoO65I	GGTNACC	2 cut(s)	263, 778
EcoRI	GAATTC	1 cut(s)	1270
EcoRII	CCWGG	2 cut(s)	37, 1521
EcoRV	GATATC	1 cut(s)	1281
EcoT14I	CCWWGG	2 cut(s)	1084, 1114
ErhI	CCWWGG	2 cut(s)	1084, 1114
FalI	AAGNNNNNCTT	2 cut(s)	1937, 1969
FaqI	GGGAC	2 cut(s)	1440, 1862
FblI	GTMKAC	1 cut(s)	48
Fnu4HI	GCNGC	4 cut(s)	633, 1037, 1692, 1815
FokI	GGATG	4 cut(s)	1232, 1849, 1892, 2085
Fsp4HI	GCNGC	4 cut(s)	633, 1037, 1692, 1815
FspBI	CTAG	3 cut(s)	981, 1055, 1377
FspI	TGCGCA	1 cut(s)	619
GlaI	GCGC	2 cut(s)	619, 1317
GluI	GCNGC	4 cut(s)	633, 1037, 1692, 1815
GsuI	CTGGAG	2 cut(s)	1340, 2082
HaeIII	GGCC	5 cut(s)	11, 42, 564, 705, 1113
HapII	CCGG	2 cut(s)	776, 918
HhaI	GCGC	2 cut(s)	620, 1318
Hin6I	GCGC	2 cut(s)	618, 1316
HinP1I	GCGC	2 cut(s)	618, 1316
HincII	GTYRAC	1 cut(s)	1155
HindII	GTYRAC	1 cut(s)	1155
HindIII	AAGCTT	3 cut(s)	99, 174, 1922
HinfI	GANTC	9 cut(s)	235, 270, 569, 575, 818, 914, 1163, 1361, 1996
HpaII	CCGG	2 cut(s)	776, 918
HphI	GGTGA	6 cut(s)	275, 671, 790, 1024, 1663, 2078
Hpy166II	GTNNAC	5 cut(s)	49, 1155, 1382, 1500, 1700
Hpy188I	TCNGA	6 cut(s)	336, 574, 948, 1240, 1335, 1636
Hpy8I	GTNNAC	5 cut(s)	49, 1155, 1382, 1500, 1700
HpyAV	CCTTC	5 cut(s)	803, 1296, 1454, 1715, 1741
HpyCH4III	ACNGT	6 cut(s)	410, 498, 784, 1133, 1784, 1964
HpyCH4IV	ACGT	2 cut(s)	745, 1917
HpyF10VI	GCNNNNNNNGC	1 cut(s)	1774
HpyF3I	CTNAG	8 cut(s)	333, 357, 945, 1187, 1332, 1445, 1527, 1585
HpySE526I	ACGT	2 cut(s)	745, 1917
HspAI	GCGC	2 cut(s)	618, 1316
Kpn2I	TCCGGA	1 cut(s)	917
KpnI	GGTACC	1 cut(s)	497
Kzo9I	GATC	6 cut(s)	148, 298, 690, 811, 1581, 2097
LguI	GCTCTTC	1 cut(s)	297
LmnI	GCTCC	2 cut(s)	171, 1883
Lsp1109I	GCAGC	2 cut(s)	1048, 1678
LweI	GCATC	6 cut(s)	1048, 1210, 1233, 1303, 1755, 1914
MaeI	CTAG	3 cut(s)	981, 1055, 1377
MaeII	ACGT	2 cut(s)	745, 1917
MaeIII	GTNAC	4 cut(s)	263, 659, 778, 2056
MalI	GATC	6 cut(s)	150, 300, 692, 813, 1583, 2099
MboI	GATC	6 cut(s)	148, 298, 690, 811, 1581, 2097
MlsI	TGGCCA	1 cut(s)	705
MluCI	AATT	7 cut(s)	67, 202, 311, 552, 1270, 1415, 2082
MluNI	TGGCCA	1 cut(s)	705
MlyI	GAGTC	1 cut(s)	827
MmeI	TCCRAC	2 cut(s)	408, 1456
Mox20I	TGGCCA	1 cut(s)	705
MroI	TCCGGA	1 cut(s)	917
MroXI	GAANNNNTTC	2 cut(s)	341, 1949
MscI	TGGCCA	1 cut(s)	705
MseI	TTAA	5 cut(s)	200, 555, 741, 840, 2010
MslI	CAYNNNNRTG	3 cut(s)	831, 1134, 1437
Msp20I	TGGCCA	1 cut(s)	705
MspA1I	CMGCKG	1 cut(s)	1160
MspI	CCGG	2 cut(s)	776, 918
MspR9I	CCNGG	2 cut(s)	39, 1523
MssI	GTTTAAAC	1 cut(s)	742
Mva1269I	GAATGC	3 cut(s)	385, 595, 1077
MvaI	CCWGG	2 cut(s)	39, 1523
MvnI	CGCG	1 cut(s)	1874
MwoI	GCNNNNNNNGC	1 cut(s)	1774
NcoI	CCATGG	1 cut(s)	1084
NdeII	GATC	6 cut(s)	148, 298, 690, 811, 1581, 2097
NlaIV	GGNNCC	1 cut(s)	495
NmuCI	GTSAC	4 cut(s)	263, 659, 778, 2056
NsbI	TGCGCA	1 cut(s)	619
NspI	RCATGY	2 cut(s)	1195, 1498
NspV	TTCGAA	1 cut(s)	420
PciI	ACATGT	1 cut(s)	1494
PciSI	GCTCTTC	1 cut(s)	297
PctI	GAATGC	3 cut(s)	385, 595, 1077
PdmI	GAANNNNTTC	2 cut(s)	341, 1949
PfeI	GAWTC	8 cut(s)	235, 270, 569, 575, 914, 1163, 1361, 1996
PkrI	GCNGC	4 cut(s)	634, 1038, 1693, 1816
PleI	GAGTC	1 cut(s)	826
PmeI	GTTTAAAC	1 cut(s)	742
PpsI	GAGTC	1 cut(s)	826
PscI	ACATGT	1 cut(s)	1494
Psp6I	CCWGG	2 cut(s)	37, 1521
PspEI	GGTNACC	2 cut(s)	263, 778
PspGI	CCWGG	2 cut(s)	37, 1521
PspN4I	GGNNCC	1 cut(s)	495
PspPI	GGNCC	1 cut(s)	9
PstNI	CAGNNNCTG	2 cut(s)	340, 821
RsaI	GTAC	9 cut(s)	125, 131, 286, 495, 1196, 1409, 1443, 1499, 1699
RsaNI	GTAC	9 cut(s)	124, 130, 285, 494, 1195, 1408, 1442, 1498, 1698
RseI	CAYNNNNRTG	3 cut(s)	831, 1134, 1437
SapI	GCTCTTC	1 cut(s)	297
SaqAI	TTAA	5 cut(s)	200, 555, 741, 840, 2010
SatI	GCNGC	4 cut(s)	633, 1037, 1692, 1815
Sau3AI	GATC	6 cut(s)	148, 298, 690, 811, 1581, 2097
Sau96I	GGNCC	1 cut(s)	9
ScaI	AGTACT	1 cut(s)	1409
SchI	GAGTC	1 cut(s)	827
ScrFI	CCNGG	2 cut(s)	39, 1523
SfaNI	GCATC	6 cut(s)	1048, 1210, 1233, 1303, 1755, 1914
SfuI	TTCGAA	1 cut(s)	420
SmiI	ATTTAAAT	1 cut(s)	201
SmiMI	CAYNNNNRTG	3 cut(s)	831, 1134, 1437
SmlI	CTYRAG	2 cut(s)	1198, 1403
SmoI	CTYRAG	2 cut(s)	1198, 1403
Sse9I	AATT	7 cut(s)	67, 202, 311, 552, 1270, 1415, 2082
SsiI	CCGC	5 cut(s)	632, 989, 1158, 1815, 1874
SspMI	CTAG	3 cut(s)	981, 1055, 1377
StyD4I	CCNGG	2 cut(s)	37, 1521
StyI	CCWWGG	2 cut(s)	1084, 1114
SwaI	ATTTAAAT	1 cut(s)	201
TaaI	ACNGT	6 cut(s)	410, 498, 784, 1133, 1784, 1964
TaiI	ACGT	2 cut(s)	748, 1920
TaqI	TCGA	5 cut(s)	345, 401, 420, 602, 1994
TaqII	GACCGA	1 cut(s)	282
TasI	AATT	7 cut(s)	67, 202, 311, 552, 1270, 1415, 2082
TatI	WGTACW	6 cut(s)	129, 1194, 1407, 1441, 1497, 1697
TauI	GCSGC	2 cut(s)	635, 1817
TfiI	GAWTC	8 cut(s)	235, 270, 569, 575, 914, 1163, 1361, 1996
Tru1I	TTAA	5 cut(s)	200, 555, 741, 840, 2010
Tru9I	TTAA	5 cut(s)	200, 555, 741, 840, 2010
TscAI	CASTG	3 cut(s)	390, 1068, 1787
TseFI	GTSAC	4 cut(s)	263, 659, 778, 2056
TseI	GCWGC	2 cut(s)	1036, 1691
Tsp45I	GTSAC	4 cut(s)	263, 659, 778, 2056
TspDTI	ATGAA	8 cut(s)	17, 227, 323, 530, 1064, 1352, 1421, 1760
TspRI	CASTG	3 cut(s)	390, 1068, 1787
XapI	RAATTY	4 cut(s)	67, 202, 1270, 1415
XceI	RCATGY	2 cut(s)	1195, 1498
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1263
XmiI	GTMKAC	1 cut(s)	48
XmnI	GAANNNNTTC	2 cut(s)	341, 1949
XspI	CTAG	3 cut(s)	981, 1055, 1377
ZrmI	AGTACT	1 cut(s)	1409

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.