Prupe.1G454900_v2.0.a1
NAC Family

NAC domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0009403
Physical Location & Seq
Forward (+)
38207406 .. 38210365
2960 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G454900.3

Sequence Viewer

Length: 1029 bp
ATGACAGGAGAACAGAAGGAGGAATTGCCACCAGGGTTCAGATTTCATCCTACAGATGAAGAACTTATCACCTTCTATCTCATCAACAAGATAACTGATGCTACTTTTACTGGAAGGGCGATCGCAGATGTCGATCTCAACAAGTGCGAGCCATGGGAACTCCCTGCAAAGGCAAAAATGGGAGAGAAGGAGTGGTACTTCTTCAGCCTTCGAGATCGGAAGTACCCAACAGGAGTGAGAACAAACCGAGCAACAAACACAGGTTACTGGAAGACGACAGGGAAAGACAAGGAGATCTTCAACAGTGTGACATCTGAGATGGTTGGGATGAAGAAGACACTTGTTTTCTACAGAGGCCGAGCTCCTCGAGGCGAGAAGTCCAATTGGGTCATGCATGAATATCGTATTCATTCTAAATCCGCCTTCAGAACCTCTAAGGATGAATGGGTGGTTTGCCGTGTCTTCCAGAAGAGCGCAGGCATAAAAAAGTATCCAACAACCCAATCAAGAGCAGCCAATCCCTACAACCTAGAAATAGGTCCAAGTGTGGTGCCATCACCCATGATGCAGATAGGTGATCACCAATTCCCATATGGCAGAAATTACATGACAAGTGCTGAGCTGGCAGAGATTTCTAGGGTTTTAAGAAATGGCGGCAGCGGCGGTGGTGGATCATCAAATGGCACTATTAACGTACCAATCCAACCCCAATTCAACTACCCAAATCTTGGAGGAGGAGGAGGAGGGTTTACAATTTCTGGGTTAAATTTGAATCTTGGTGCGCCAGCCACCCAGCCCATGTTGAGGCCAATGCCACCACCACAACTACATCATCAAGGTCCCCCGGCTATGAACCCTCATCAGCAAGATGTTATGAGTAATGGGGCTAACAATAATTCTCTTGGTCCAGATCATCAAGCTGGATATGGTGCAATAGATATGAACAACAACAATGCAAATGGGAATGGCAACAGGTTTATGAACATGGAGCATTGTGTGGATCTTGACACCTACTGGCCTCCCTATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NAM

Protein Analysis

343

Amino Acids

38.09

Weight (kDa)

8.95

Isoelectric Point (pI)

32.39

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AbsI CCTCGAGG 1 cut(s) 366
AccB1I GGYRCC 1 cut(s) 550
AccB7I CCANNNNNTGG 1 cut(s) 728
AciI CCGC 4 cut(s) 420, 654, 660, 663
AclWI GGATC 2 cut(s) 679, 1008
AcsI RAATTY 1 cut(s) 766
AcuI CTGAAG 2 cut(s) 187, 409
AfaI GTAC 3 cut(s) 197, 224, 696
AfiI CCNNNNNNNGG 3 cut(s) 169, 728, 804
AgsI TTSAA 3 cut(s) 301, 715, 772
AjnI CCWGG 1 cut(s) 31
AluBI AGCT 3 cut(s) 362, 622, 920
AluI AGCT 3 cut(s) 362, 622, 920
Alw21I GWGCWC 1 cut(s) 364
AlwI GGATC 2 cut(s) 679, 1008
Ama87I CYCGRG 1 cut(s) 366
AoxI GGCC 3 cut(s) 355, 806, 1016
ApeKI GCWGC 2 cut(s) 512, 657
ApoI RAATTY 1 cut(s) 766
AsiSI GCGATCGC 1 cut(s) 123
AspLEI GCGC 2 cut(s) 476, 784
AspS9I GGNCC 3 cut(s) 539, 839, 905
AsuC2I CCSGG 1 cut(s) 845
AsuHPI GGTGA 4 cut(s) 61, 549, 572, 587
AvaI CYCGRG 1 cut(s) 366
AvaII GGWCC 3 cut(s) 539, 839, 905
BanI GGYRCC 1 cut(s) 550
BanII GRGCYC 1 cut(s) 364
BarI GAAGNNNNNNTAC 2 cut(s) 179, 211
BbsI GAAGAC 3 cut(s) 278, 341, 454
Bbv12I GWGCWC 1 cut(s) 364
BbvI GCAGC 2 cut(s) 524, 669
BccI CCATC 2 cut(s) 313, 562
BceAI ACGGC 1 cut(s) 441
BcgI CGANNNNNNTGC 2 cut(s) 383, 417
BciT130I CCWGG 1 cut(s) 33
BciVI GTATCC 1 cut(s) 501
BclI TGATCA 1 cut(s) 577
BcnI CCSGG 1 cut(s) 845
BfaI CTAG 2 cut(s) 530, 636
BfmI CTRYAG 2 cut(s) 51, 349
BfuI GTATCC 1 cut(s) 501
BglII AGATCT 1 cut(s) 294
BisI GCNGC 4 cut(s) 513, 655, 658, 661
BlpI GCTNAGC 1 cut(s) 618
BlsI GCNGC 4 cut(s) 514, 656, 659, 662
Bme1390I CCNGG 2 cut(s) 33, 845
Bme18I GGWCC 3 cut(s) 539, 839, 905
BmeT110I CYCGRG 1 cut(s) 366
BmgT120I GGNCC 3 cut(s) 539, 839, 905
BmiI GGNNCC 2 cut(s) 552, 841
BmrFI CCNGG 2 cut(s) 33, 845
BmsI GCATC 2 cut(s) 88, 555
BpiI GAAGAC 3 cut(s) 278, 341, 454
Bpu1102I GCTNAGC 1 cut(s) 618
BpuMI CCSGG 1 cut(s) 845
BsaBI GATNNNNATC 1 cut(s) 132
BsaJI CCNNGG 3 cut(s) 32, 152, 843
Bsc4I CCNNNNNNNGG 3 cut(s) 169, 728, 804
Bse1I ACTGG 3 cut(s) 115, 272, 1019
Bse8I GATNNNNATC 1 cut(s) 132
BseBI CCWGG 1 cut(s) 33
BseDI CCNNGG 3 cut(s) 32, 152, 843
BseGI GGATG 3 cut(s) 46, 333, 445
BseJI GATNNNNATC 1 cut(s) 132
BseLI CCNNNNNNNGG 3 cut(s) 169, 728, 804
BseMII CTCAG 2 cut(s) 306, 609
BseNI ACTGG 3 cut(s) 115, 272, 1019
BseRI GAGGAG 5 cut(s) 354, 747, 750, 753, 756
BseXI GCAGC 2 cut(s) 524, 669
BseYI CCCAGC 1 cut(s) 792
Bsh1285I CGRYCG 1 cut(s) 123
BshFI GGCC 3 cut(s) 357, 808, 1018
BshNI GGYRCC 1 cut(s) 550
BsiEI CGRYCG 1 cut(s) 123
BsiHKAI GWGCWC 1 cut(s) 364
BsiHKCI CYCGRG 1 cut(s) 366
BsiSI CCGG 1 cut(s) 845
BslFI GGGAC 1 cut(s) 825
BslI CCNNNNNNNGG 3 cut(s) 169, 728, 804
BsmFI GGGAC 1 cut(s) 825
BsnI GGCC 3 cut(s) 357, 808, 1018
BsoBI CYCGRG 1 cut(s) 366
Bsp1286I GDGCHC 1 cut(s) 364
Bsp143I GATC 8 cut(s) 120, 133, 214, 294, 577, 671, 910, 1000
Bsp1720I GCTNAGC 1 cut(s) 618
Bsp19I CCATGG 1 cut(s) 152
BspACI CCGC 4 cut(s) 420, 654, 660, 663
BspANI GGCC 3 cut(s) 357, 808, 1018
BspCNI CTCAG 2 cut(s) 307, 610
BspLI GGNNCC 2 cut(s) 552, 841
BspPI GGATC 2 cut(s) 679, 1008
BspQI GCTCTTC 1 cut(s) 464
BspT107I GGYRCC 1 cut(s) 550
BsrI ACTGG 3 cut(s) 115, 272, 1019
BssECI CCNNGG 3 cut(s) 32, 152, 843
BssMI GATC 8 cut(s) 120, 133, 214, 294, 577, 671, 910, 1000
BssT1I CCWWGG 1 cut(s) 152
Bst2UI CCWGG 1 cut(s) 33
Bst4CI ACNGT 1 cut(s) 305
Bst6I CTCTTC 1 cut(s) 464
BstC8I GCNNGC 4 cut(s) 149, 478, 624, 786
BstDEI CTNAG 3 cut(s) 315, 435, 618
BstDSI CCRYGG 1 cut(s) 152
BstF5I GGATG 3 cut(s) 46, 333, 445
BstHHI GCGC 2 cut(s) 476, 784
BstKTI GATC 8 cut(s) 123, 136, 217, 297, 580, 674, 913, 1003
BstMBI GATC 8 cut(s) 120, 133, 214, 294, 577, 671, 910, 1000
BstMCI CGRYCG 1 cut(s) 123
BstMWI GCNNNNNNNGC 2 cut(s) 623, 660
BstNI CCWGG 1 cut(s) 33
BstSCI CCNGG 2 cut(s) 31, 843
BstSFI CTRYAG 2 cut(s) 51, 349
BstV1I GCAGC 2 cut(s) 524, 669
BstV2I GAAGAC 3 cut(s) 278, 341, 454
BstX2I RGATCY 2 cut(s) 294, 1000
BstYI RGATCY 2 cut(s) 294, 1000
BsuI GTATCC 1 cut(s) 501
BsuRI GGCC 3 cut(s) 357, 808, 1018
BtgI CCRYGG 1 cut(s) 152
BtsCI GGATG 3 cut(s) 46, 333, 445
BtsIMutI CAGTG 1 cut(s) 310
Cac8I GCNNGC 4 cut(s) 149, 478, 624, 786
CfoI GCGC 2 cut(s) 476, 784
Cfr13I GGNCC 3 cut(s) 539, 839, 905
Csp6I GTAC 3 cut(s) 196, 223, 695
CviAII CATG 7 cut(s) 153, 391, 395, 562, 607, 799, 985
CviQI GTAC 3 cut(s) 196, 223, 695
DdeI CTNAG 3 cut(s) 315, 435, 618
DpnI GATC 8 cut(s) 122, 135, 216, 296, 579, 673, 912, 1002
DpnII GATC 8 cut(s) 120, 133, 214, 294, 577, 671, 910, 1000
Eam1104I CTCTTC 1 cut(s) 464
EarI CTCTTC 1 cut(s) 464
EciI GGCGGA 1 cut(s) 409
Ecl136II GAGCTC 1 cut(s) 362
Eco130I CCWWGG 1 cut(s) 152
Eco24I GRGCYC 1 cut(s) 364
Eco47I GGWCC 3 cut(s) 539, 839, 905
Eco53kI GAGCTC 1 cut(s) 362
Eco57I CTGAAG 2 cut(s) 187, 409
Eco88I CYCGRG 1 cut(s) 366
EcoICRI GAGCTC 1 cut(s) 362
EcoO109I RGGNCCY 1 cut(s) 839
EcoRII CCWGG 1 cut(s) 31
EcoT14I CCWWGG 1 cut(s) 152
EcoT22I ATGCAT 1 cut(s) 396
EcoT38I GRGCYC 1 cut(s) 364
ErhI CCWWGG 1 cut(s) 152
FaeI CATG 7 cut(s) 156, 394, 398, 565, 610, 802, 988
FalI AAGNNNNNCTT 2 cut(s) 281, 313
FaqI GGGAC 1 cut(s) 825
FatI CATG 7 cut(s) 152, 390, 394, 561, 606, 798, 984
FauNDI CATATG 1 cut(s) 592
FbaI TGATCA 1 cut(s) 577
Fnu4HI GCNGC 4 cut(s) 513, 655, 658, 661
FokI GGATG 3 cut(s) 33, 340, 452
FriOI GRGCYC 1 cut(s) 364
Fsp4HI GCNGC 4 cut(s) 513, 655, 658, 661
FspBI CTAG 2 cut(s) 530, 636
GlaI GCGC 2 cut(s) 475, 783
GluI GCNGC 4 cut(s) 513, 655, 658, 661
GsaI CCCAGC 1 cut(s) 796
HaeIII GGCC 3 cut(s) 357, 808, 1018
HapII CCGG 1 cut(s) 845
HhaI GCGC 2 cut(s) 476, 784
Hin1II CATG 7 cut(s) 156, 394, 398, 565, 610, 802, 988
Hin6I GCGC 2 cut(s) 474, 782
HinP1I GCGC 2 cut(s) 474, 782
HinfI GANTC 1 cut(s) 772
HpaII CCGG 1 cut(s) 845
HphI GGTGA 4 cut(s) 61, 549, 572, 587
Hpy166II GTNNAC 1 cut(s) 750
Hpy188I TCNGA 4 cut(s) 41, 219, 316, 428
Hpy188III TCNNGA 5 cut(s) 212, 466, 507, 908, 1004
Hpy8I GTNNAC 1 cut(s) 750
HpyAV CCTTC 6 cut(s) 10, 82, 108, 181, 218, 433
HpyCH4III ACNGT 1 cut(s) 305
HpyCH4IV ACGT 1 cut(s) 693
HpyCH4V TGCA 5 cut(s) 167, 394, 568, 932, 956
HpyF10VI GCNNNNNNNGC 2 cut(s) 623, 660
HpyF3I CTNAG 3 cut(s) 315, 435, 618
HpySE526I ACGT 1 cut(s) 693
Hsp92II CATG 7 cut(s) 156, 394, 398, 565, 610, 802, 988
HspAI GCGC 2 cut(s) 474, 782
Ksp22I TGATCA 1 cut(s) 577
Kzo9I GATC 8 cut(s) 120, 133, 214, 294, 577, 671, 910, 1000
LguI GCTCTTC 1 cut(s) 464
LmnI GCTCC 2 cut(s) 367, 988
Lsp1109I GCAGC 2 cut(s) 524, 669
LweI GCATC 2 cut(s) 88, 555
MaeI CTAG 2 cut(s) 530, 636
MaeII ACGT 1 cut(s) 693
MaeIII GTNAC 2 cut(s) 263, 307
MalI GATC 8 cut(s) 122, 135, 216, 296, 579, 673, 912, 1002
MboI GATC 8 cut(s) 120, 133, 214, 294, 577, 671, 910, 1000
MboII GAAGA 8 cut(s) 71, 193, 283, 289, 343, 346, 454, 481
MfeI CAATTG 1 cut(s) 382
MflI RGATCY 2 cut(s) 294, 1000
MhlI GDGCHC 1 cut(s) 364
MluCI AATT 8 cut(s) 23, 382, 584, 601, 710, 753, 766, 895
MmeI TCCRAC 2 cut(s) 518, 727
Mph1103I ATGCAT 1 cut(s) 396
MseI TTAA 3 cut(s) 644, 690, 764
MspA1I CMGCKG 1 cut(s) 660
MspI CCGG 1 cut(s) 845
MspR9I CCNGG 2 cut(s) 33, 845
MunI CAATTG 1 cut(s) 382
MvaI CCWGG 1 cut(s) 33
MwoI GCNNNNNNNGC 2 cut(s) 623, 660
NciI CCSGG 1 cut(s) 845
NcoI CCATGG 1 cut(s) 152
NdeI CATATG 1 cut(s) 592
NdeII GATC 8 cut(s) 120, 133, 214, 294, 577, 671, 910, 1000
NlaIII CATG 7 cut(s) 156, 394, 398, 565, 610, 802, 988
NlaIV GGNNCC 2 cut(s) 552, 841
NmeAIII GCCGAG 1 cut(s) 383
NmuCI GTSAC 1 cut(s) 307
NsiI ATGCAT 1 cut(s) 396
PaeR7I CTCGAG 1 cut(s) 366
PciSI GCTCTTC 1 cut(s) 464
PcsI WCGNNNNNNNCGW 1 cut(s) 129
PfeI GAWTC 1 cut(s) 772
PflMI CCANNNNNTGG 1 cut(s) 728
PkrI GCNGC 4 cut(s) 514, 656, 659, 662
Ple19I CGATCG 1 cut(s) 123
PpuMI RGGWCCY 1 cut(s) 839
Psp124BI GAGCTC 1 cut(s) 364
Psp5II RGGWCCY 1 cut(s) 839
Psp6I CCWGG 1 cut(s) 31
PspFI CCCAGC 1 cut(s) 792
PspGI CCWGG 1 cut(s) 31
PspN4I GGNNCC 2 cut(s) 552, 841
PspPI GGNCC 3 cut(s) 539, 839, 905
PspPPI RGGWCCY 1 cut(s) 839
PspXI VCTCGAGB 1 cut(s) 366
PsuI RGATCY 2 cut(s) 294, 1000
PvuI CGATCG 1 cut(s) 123
RgaI GCGATCGC 1 cut(s) 123
RsaI GTAC 3 cut(s) 197, 224, 696
RsaNI GTAC 3 cut(s) 196, 223, 695
SacI GAGCTC 1 cut(s) 364
SapI GCTCTTC 1 cut(s) 464
SaqAI TTAA 3 cut(s) 644, 690, 764
SatI GCNGC 4 cut(s) 513, 655, 658, 661
Sau3AI GATC 8 cut(s) 120, 133, 214, 294, 577, 671, 910, 1000
Sau96I GGNCC 3 cut(s) 539, 839, 905
ScrFI CCNGG 2 cut(s) 33, 845
SduI GDGCHC 1 cut(s) 364
SfaAI GCGATCGC 1 cut(s) 123
SfaNI GCATC 2 cut(s) 88, 555
SfcI CTRYAG 2 cut(s) 51, 349
Sfr274I CTCGAG 1 cut(s) 366
SgfI GCGATCGC 1 cut(s) 123
SinI GGWCC 3 cut(s) 539, 839, 905
SlaI CTCGAG 1 cut(s) 366
SmlI CTYRAG 1 cut(s) 366
SmoI CTYRAG 1 cut(s) 366
Sse9I AATT 8 cut(s) 23, 382, 584, 601, 710, 753, 766, 895
SsiI CCGC 4 cut(s) 420, 654, 660, 663
SspMI CTAG 2 cut(s) 530, 636
SstI GAGCTC 1 cut(s) 364
StyD4I CCNGG 2 cut(s) 31, 843
StyI CCWWGG 1 cut(s) 152
TaaI ACNGT 1 cut(s) 305
TaiI ACGT 1 cut(s) 696
TaqI TCGA 3 cut(s) 132, 211, 367
TasI AATT 8 cut(s) 23, 382, 584, 601, 710, 753, 766, 895
TauI GCSGC 2 cut(s) 657, 663
TfiI GAWTC 1 cut(s) 772
Tru1I TTAA 3 cut(s) 644, 690, 764
Tru9I TTAA 3 cut(s) 644, 690, 764
TscAI CASTG 1 cut(s) 310
TseFI GTSAC 1 cut(s) 307
TseI GCWGC 2 cut(s) 512, 657
Tsp45I GTSAC 1 cut(s) 307
TspDTI ATGAA 9 cut(s) 35, 72, 344, 398, 411, 456, 866, 956, 995
TspRI CASTG 1 cut(s) 310
Van91I CCANNNNNTGG 1 cut(s) 728
VpaK11BI GGWCC 3 cut(s) 539, 839, 905
XapI RAATTY 1 cut(s) 766
XcmI CCANNNNNNNNNTGG 1 cut(s) 590
XhoI CTCGAG 1 cut(s) 366
XspI CTAG 2 cut(s) 530, 636
Zsp2I ATGCAT 1 cut(s) 396
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.