Prupe.1G455600_v2.0.a1

Protein of unknown function, DUF599

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0015453
Physical Location & Seq
Reverse (-)
38242565 .. 38244738
2174 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G455600.3

Sequence Viewer

Length: 708 bp
ATGGAATGGAGGAAATGCTACTTGGATGTAATTCTTGTACCACTAGGGTTTCTGATAACTGCTTCTTATCATGCTTGGTTATGGCATAAGGTTCGAACTGATCCACAGTCTACCATCATCGGCATAAACACAAATGGACGACGATTTTGGGTCTCCGCAATGATGAAGGATAATGAAAAGAAAAATATCTTGGCCGTCCAAACACTTCGGAACACAATCATGGGGTCAACCCTAATGGCCACCACCTCAATCCTTCTCTGCTGTGGCATAGCAGCCGTGATTAGCAGCACATACAGTGTGAAGAAACCGCTCAACGACTCCGTTTACGGGGCTCACGGAGAATTCATGGTGGCTCTAAAATACGTGACCCTACTCACAATCTTTCTCTTCTCATTCATGTGCCACTCACTTTCAATCAGGTTCATAAACCAAGTGAACATCCTAATCAACAGTCCACAAGACCCCATGTCCTTGGTCACCTCAGAGTATGTGTCTGAGCTTTTGGAGAAGGGTTATCTGTTGAACACTGTGGGGAACAGGTTGTTCTACGCAGCTCTGCCTCTTCTGCTTTGGATCTTCGGGCCAGTTTTGGTGTTTTTGTGTTCTGCCACAATGGTGCCTGTGCTTTACAATTTGGACTTTGTGTTTAATTGCACTGAGAAGAGGAAAATGGATACTGGCAGTGAAAATAGGGCCGAGTTTGTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF599

Protein Analysis

236

Amino Acids

26.62

Weight (kDa)

8.71

Isoelectric Point (pI)

39.27

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0015453)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G31330
fragaria_vesca FvH4_2g36420
malus_domestica MD08G1123900.v1.1 MD15G1102500.v1.1
prunus_persica Prupe.1G455600_v2.0.a1
pyrus_communis pycom08g10270
rosa_chinensis RchiOBHm_Chr6g0305481
rosa_laevigata RLG00000010888
rosa_multiflora Rmu_sc0007817.1_g000001
rosa_roxburghii Rroxscaffold_7G00162770
rosa_rugosa Rorug06G0340400
rosa_samantha Rh6AG452600 Rh6BG449200 Rh6CG466300 Rh6DG453000
rosa_wichuraiana Rw6G039440

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 616
AccBSI CCGCTC 1 cut(s) 310
AccI GTMKAC 1 cut(s) 110
AciI CCGC 2 cut(s) 156, 308
AclWI GGATC 2 cut(s) 95, 581
AcoI YGGCCR 2 cut(s) 192, 237
AcsI RAATTY 1 cut(s) 341
AfaI GTAC 1 cut(s) 39
AfiI CCNNNNNNNGG 1 cut(s) 327
AgsI TTSAA 2 cut(s) 414, 523
AhdI GACNNNNNGTC 1 cut(s) 466
AjuI GAANNNNNNNTTGG 3 cut(s) 37, 173, 205
AleI CACNNNNGTG 1 cut(s) 614
AluBI AGCT 2 cut(s) 499, 554
AluI AGCT 2 cut(s) 499, 554
Alw26I GTCTC 1 cut(s) 157
AlwI GGATC 2 cut(s) 95, 581
AoxI GGCC 4 cut(s) 192, 237, 581, 693
ApeKI GCWGC 3 cut(s) 272, 285, 551
ApoI RAATTY 1 cut(s) 341
ArsI GACNNNNNNTTYG 2 cut(s) 129, 161
AspS9I GGNCC 2 cut(s) 581, 693
AsuHPI GGTGA 1 cut(s) 469
AsuII TTCGAA 1 cut(s) 94
BalI TGGCCA 1 cut(s) 239
BanI GGYRCC 1 cut(s) 616
BanII GRGCYC 1 cut(s) 334
BbvI GCAGC 3 cut(s) 284, 297, 563
BccI CCATC 1 cut(s) 122
BceAI ACGGC 2 cut(s) 179, 260
BcgI CGANNNNNNTGC 2 cut(s) 74, 108
BciVI GTATCC 1 cut(s) 667
BcoDI GTCTC 1 cut(s) 157
BfaI CTAG 1 cut(s) 44
BfuI GTATCC 1 cut(s) 667
BisI GCNGC 3 cut(s) 273, 286, 552
BlsI GCNGC 3 cut(s) 274, 287, 553
BmeRI GACNNNNNGTC 1 cut(s) 466
BmgT120I GGNCC 2 cut(s) 581, 693
BmiI GGNNCC 1 cut(s) 618
Bpu14I TTCGAA 1 cut(s) 94
BsaAI YACGTR 1 cut(s) 364
BsaI GGTCTC 1 cut(s) 157
BsaJI CCNNGG 1 cut(s) 471
Bsc4I CCNNNNNNNGG 1 cut(s) 327
Bse1I ACTGG 2 cut(s) 584, 682
Bse3DI GCAATG 1 cut(s) 165
BseDI CCNNGG 1 cut(s) 471
BseGI GGATG 2 cut(s) 31, 438
BseLI CCNNNNNNNGG 1 cut(s) 327
BseMI GCAATG 1 cut(s) 165
BseMII CTCAG 3 cut(s) 486, 495, 648
BseNI ACTGG 2 cut(s) 584, 682
BseXI GCAGC 3 cut(s) 284, 297, 563
BshFI GGCC 4 cut(s) 194, 239, 583, 695
BshNI GGYRCC 1 cut(s) 616
BslI CCNNNNNNNGG 1 cut(s) 327
BsmAI GTCTC 1 cut(s) 157
BsnI GGCC 4 cut(s) 194, 239, 583, 695
Bso31I GGTCTC 1 cut(s) 157
Bsp119I TTCGAA 1 cut(s) 94
Bsp1286I GDGCHC 1 cut(s) 334
Bsp143I GATC 2 cut(s) 100, 573
BspACI CCGC 2 cut(s) 156, 308
BspANI GGCC 4 cut(s) 194, 239, 583, 695
BspCNI CTCAG 3 cut(s) 487, 494, 649
BspLI GGNNCC 1 cut(s) 618
BspPI GGATC 2 cut(s) 95, 581
BspT104I TTCGAA 1 cut(s) 94
BspT107I GGYRCC 1 cut(s) 616
BspTNI GGTCTC 1 cut(s) 157
BsrBI CCGCTC 1 cut(s) 310
BsrDI GCAATG 1 cut(s) 165
BsrI ACTGG 2 cut(s) 584, 682
BssECI CCNNGG 1 cut(s) 471
BssMI GATC 2 cut(s) 100, 573
BssT1I CCWWGG 1 cut(s) 471
Bst4CI ACNGT 4 cut(s) 108, 296, 452, 529
Bst6I CTCTTC 3 cut(s) 392, 567, 656
BstBAI YACGTR 1 cut(s) 364
BstBI TTCGAA 1 cut(s) 94
BstDEI CTNAG 3 cut(s) 481, 495, 657
BstEII GGTNACC 1 cut(s) 475
BstF5I GGATG 2 cut(s) 31, 438
BstKTI GATC 2 cut(s) 103, 576
BstMAI GTCTC 1 cut(s) 157
BstMBI GATC 2 cut(s) 100, 573
BstMWI GCNNNNNNNGC 1 cut(s) 565
BstPI GGTNACC 1 cut(s) 475
BstV1I GCAGC 3 cut(s) 284, 297, 563
BstX2I RGATCY 1 cut(s) 573
BstXI CCANNNNNNTGG 1 cut(s) 472
BstYI RGATCY 1 cut(s) 573
BsuI GTATCC 1 cut(s) 667
BsuRI GGCC 4 cut(s) 194, 239, 583, 695
BtsCI GGATG 2 cut(s) 31, 438
BtsI GCAGTG 1 cut(s) 688
BtsIMutI CAGTG 4 cut(s) 301, 525, 654, 688
Cfr13I GGNCC 2 cut(s) 581, 693
Csp6I GTAC 1 cut(s) 38
CviAII CATG 5 cut(s) 71, 220, 346, 397, 466
CviJI RGCY 9 cut(s) 194, 239, 275, 332, 353, 499, 554, 583, 695
CviKI_1 RGCY 9 cut(s) 194, 239, 275, 332, 353, 499, 554, 583, 695
CviQI GTAC 1 cut(s) 38
DdeI CTNAG 3 cut(s) 481, 495, 657
DpnI GATC 2 cut(s) 102, 575
DpnII GATC 2 cut(s) 100, 573
DriI GACNNNNNGTC 1 cut(s) 466
EaeI YGGCCR 2 cut(s) 192, 237
Eam1104I CTCTTC 3 cut(s) 392, 567, 656
Eam1105I GACNNNNNGTC 1 cut(s) 466
EarI CTCTTC 3 cut(s) 392, 567, 656
Eco130I CCWWGG 1 cut(s) 471
Eco24I GRGCYC 1 cut(s) 334
Eco31I GGTCTC 1 cut(s) 157
Eco91I GGTNACC 1 cut(s) 475
EcoO65I GGTNACC 1 cut(s) 475
EcoRI GAATTC 1 cut(s) 341
EcoT14I CCWWGG 1 cut(s) 471
EcoT38I GRGCYC 1 cut(s) 334
ErhI CCWWGG 1 cut(s) 471
FaeI CATG 5 cut(s) 74, 223, 349, 400, 469
FatI CATG 5 cut(s) 70, 219, 345, 396, 465
FblI GTMKAC 1 cut(s) 110
Fnu4HI GCNGC 3 cut(s) 273, 286, 552
FokI GGATG 2 cut(s) 38, 425
FriOI GRGCYC 1 cut(s) 334
Fsp4HI GCNGC 3 cut(s) 273, 286, 552
FspBI CTAG 1 cut(s) 44
GluI GCNGC 3 cut(s) 273, 286, 552
HaeIII GGCC 4 cut(s) 194, 239, 583, 695
Hin1II CATG 5 cut(s) 74, 223, 349, 400, 469
HincII GTYRAC 1 cut(s) 228
HindII GTYRAC 1 cut(s) 228
HinfI GANTC 1 cut(s) 317
HphI GGTGA 1 cut(s) 469
Hpy166II GTNNAC 5 cut(s) 111, 228, 325, 436, 455
Hpy188I TCNGA 4 cut(s) 54, 210, 484, 496
Hpy8I GTNNAC 5 cut(s) 111, 228, 325, 436, 455
Hpy99I CGWCG 1 cut(s) 144
HpyAV CCTTC 3 cut(s) 160, 263, 502
HpyCH4III ACNGT 4 cut(s) 108, 296, 452, 529
HpyCH4IV ACGT 1 cut(s) 363
HpyCH4V TGCA 1 cut(s) 654
HpyF10VI GCNNNNNNNGC 1 cut(s) 565
HpyF3I CTNAG 3 cut(s) 481, 495, 657
HpySE526I ACGT 1 cut(s) 363
Hsp92II CATG 5 cut(s) 74, 223, 349, 400, 469
Kzo9I GATC 2 cut(s) 100, 573
LpnPI CCDG 5 cut(s) 403, 523, 597, 633, 663
Lsp1109I GCAGC 3 cut(s) 284, 297, 563
MaeI CTAG 1 cut(s) 44
MaeII ACGT 1 cut(s) 363
MaeIII GTNAC 2 cut(s) 364, 475
MalI GATC 2 cut(s) 102, 575
MbiI CCGCTC 1 cut(s) 310
MboI GATC 2 cut(s) 100, 573
MboII GAAGA 5 cut(s) 313, 379, 554, 568, 673
MflI RGATCY 1 cut(s) 573
MhlI GDGCHC 1 cut(s) 334
MlsI TGGCCA 1 cut(s) 239
MluCI AATT 4 cut(s) 30, 341, 631, 649
MluNI TGGCCA 1 cut(s) 239
MlyI GAGTC 1 cut(s) 311
MnlI CCTC 5 cut(s) 3, 256, 490, 570, 657
Mox20I TGGCCA 1 cut(s) 239
MscI TGGCCA 1 cut(s) 239
MseI TTAA 1 cut(s) 648
MslI CAYNNNNRTG 3 cut(s) 218, 397, 614
Msp20I TGGCCA 1 cut(s) 239
MwoI GCNNNNNNNGC 1 cut(s) 565
NdeII GATC 2 cut(s) 100, 573
NlaIII CATG 5 cut(s) 74, 223, 349, 400, 469
NlaIV GGNNCC 1 cut(s) 618
NmuCI GTSAC 2 cut(s) 364, 475
NspV TTCGAA 1 cut(s) 94
OliI CACNNNNGTG 1 cut(s) 614
PkrI GCNGC 3 cut(s) 274, 287, 553
PleI GAGTC 1 cut(s) 311
PpsI GAGTC 1 cut(s) 311
Ppu21I YACGTR 1 cut(s) 364
PspEI GGTNACC 1 cut(s) 475
PspN4I GGNNCC 1 cut(s) 618
PspPI GGNCC 2 cut(s) 581, 693
PsuI RGATCY 1 cut(s) 573
RsaI GTAC 1 cut(s) 39
RsaNI GTAC 1 cut(s) 38
RseI CAYNNNNRTG 3 cut(s) 218, 397, 614
SaqAI TTAA 1 cut(s) 648
SatI GCNGC 3 cut(s) 273, 286, 552
Sau3AI GATC 2 cut(s) 100, 573
Sau96I GGNCC 2 cut(s) 581, 693
SchI GAGTC 1 cut(s) 311
SduI GDGCHC 1 cut(s) 334
SetI ASST 8 cut(s) 93, 248, 366, 422, 482, 501, 542, 556
SfuI TTCGAA 1 cut(s) 94
SmiMI CAYNNNNRTG 3 cut(s) 218, 397, 614
Sse9I AATT 4 cut(s) 30, 341, 631, 649
SsiI CCGC 2 cut(s) 156, 308
SspMI CTAG 1 cut(s) 44
StyI CCWWGG 1 cut(s) 471
TaaI ACNGT 4 cut(s) 108, 296, 452, 529
TaiI ACGT 1 cut(s) 366
TaqI TCGA 1 cut(s) 94
TasI AATT 4 cut(s) 30, 341, 631, 649
Tru1I TTAA 1 cut(s) 648
Tru9I TTAA 1 cut(s) 648
TscAI CASTG 4 cut(s) 301, 532, 661, 688
TseFI GTSAC 2 cut(s) 364, 475
TseI GCWGC 3 cut(s) 272, 285, 551
Tsp45I GTSAC 2 cut(s) 364, 475
TspDTI ATGAA 5 cut(s) 179, 189, 334, 385, 412
TspGWI ACGGA 2 cut(s) 310, 351
TspRI CASTG 4 cut(s) 301, 532, 661, 688
XapI RAATTY 1 cut(s) 341
XmiI GTMKAC 1 cut(s) 110
XspI CTAG 1 cut(s) 44
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.