Prupe.1G472800_v2.0.a1

Protein of unknown function (DUF642)

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Forward (+)
39309085 .. 39312785
3701 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G472800.1

Sequence Viewer

Length: 1104 bp
ATGAGAGGGGTTGCCTTATTTTTGTCGGTGCTATTGTGCGCCACTTGCCACTCTGCCCTGTCCATCATCGATGGTTATTTGGAGAATGGGAATTTTGAGGAGGCCCCTAAGCCCTCAGACATCAGGGGCACAGAAGTGATAGGGCGCTATGCCATACCAAAATGGGAAATTTCTGGGTTTGTTGAGTACATTAAGTCTGGCCAGAAGCAAGGGGACATGTTGCTGGTTGTGCCTGAGGGGGCCTATGCAGTTAGACTTGGAAATGAGGCCTCAATTAAGCAGAGGATCAAAGTGACCAAGGGCCTATACTATTCTATCACTTTTAGTGCAGCCAGGACCTGTGCTCAAGAGGAGCGTTTGAACATCTCTGTGGCACCAGACTCTGGGGTGCTGCCAATTCAGACAGTGTATAGCAGCAATGGCTGGGATTCTTATGCCTGGGCATTTCAAGCTGACTATGAGCAAATTGAGCTTCTTCTGCATAACCCTGGTGTCGAGGAGGATCCGGCTTGCGGCCCTCTCATCGATTCGATTGCCATTCGAACTCTGTACCCTCCTCGAGCAACCAACAAGAACTTGTTGAAAAATGCCGGTTTCGAAGAAGGGCCATACATGTTCCCAAACGCATCCTGGGGAGTCCTAATCCCACCAAACATAGAAGACGACCACTCTCCATTACCAGGCTGGATGGTGGAGTCTCTGAAAGCAGTGAAGTACATAGACTCAAACCATTTCTCAGTGCCAGAGGGAAAAAGAGCAGTTGAGCTTGTAGCAGGAAAAGAAAGCGCCATAGCCCAAGTTGCCAGAACCATCCCCGGCAAGACCTACGTGCTCTCATTCTCCGTGGGAGACGCAAGCAACTCCTGTGAGGGCTCCATGATCGTGGAGGCATTTGCAGGCAGAGACACAGTCAAAGTGCCCTACGAGTCCAAGGGCAAAGGAGGGTTCAAGAGAGCGGTGCTCAAATTTGTGGCTGTTTCTACCAGGACACGTGTCATGTTCCTGAGCACGTATTACACCATGAGGAGCGATGACTTCTCTTCTCTGTGTGGACCTGTGCTTGATGATGTGAAGTTGTTGAGCCTCAAAAACCCTAGACAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

368

Amino Acids

40.21

Weight (kDa)

5.93

Isoelectric Point (pI)

37.1

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0009179)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 373
AccB7I CCANNNNNTGG 1 cut(s) 383
AccBSI CCGCTC 1 cut(s) 956
AciI CCGC 2 cut(s) 513, 956
AclWI GGATC 3 cut(s) 293, 497, 510
AcoI YGGCCR 1 cut(s) 199
AcsI RAATTY 3 cut(s) 91, 168, 965
AcvI CACGTG 1 cut(s) 992
AfaI GTAC 3 cut(s) 188, 551, 716
AfiI CCNNNNNNNGG 3 cut(s) 383, 512, 680
AflIII ACRYGT 4 cut(s) 216, 612, 989, 991
AgsI TTSAA 4 cut(s) 361, 449, 583, 949
AjnI CCWGG 6 cut(s) 332, 437, 487, 629, 679, 983
AleI CACNNNNGTG 1 cut(s) 134
AluBI AGCT 3 cut(s) 452, 472, 766
AluI AGCT 3 cut(s) 452, 472, 766
Alw21I GWGCWC 4 cut(s) 346, 834, 963, 1010
Alw26I GTCTC 3 cut(s) 702, 843, 897
AlwI GGATC 3 cut(s) 293, 497, 510
AlwNI CAGNNNCTG 2 cut(s) 339, 383
Ama87I CYCGRG 1 cut(s) 558
AoxI GGCC 7 cut(s) 102, 199, 240, 267, 301, 514, 605
ApeKI GCWGC 3 cut(s) 329, 391, 414
ApoI RAATTY 3 cut(s) 91, 168, 965
AspLEI GCGC 3 cut(s) 41, 147, 788
AspS9I GGNCC 7 cut(s) 103, 240, 301, 336, 515, 605, 1052
AsuC2I CCSGG 1 cut(s) 816
AsuII TTCGAA 2 cut(s) 541, 597
AvaI CYCGRG 1 cut(s) 558
AvaII GGWCC 2 cut(s) 336, 1052
AxyI CCTNAGG 1 cut(s) 234
BaeGI GKGCMC 2 cut(s) 131, 921
BalI TGGCCA 1 cut(s) 201
BamHI GGATCC 1 cut(s) 502
BanI GGYRCC 1 cut(s) 373
BanII GRGCYC 1 cut(s) 875
BbrPI CACGTG 1 cut(s) 992
BbsI GAAGAC 1 cut(s) 666
Bbv12I GWGCWC 4 cut(s) 346, 834, 963, 1010
BbvI GCAGC 3 cut(s) 341, 378, 426
BccI CCATC 4 cut(s) 65, 71, 682, 818
BcgI CGANNNNNNTGC 2 cut(s) 515, 549
BciT130I CCWGG 6 cut(s) 334, 439, 489, 631, 681, 985
BcnI CCSGG 1 cut(s) 816
BcoDI GTCTC 3 cut(s) 702, 843, 897
BfaI CTAG 1 cut(s) 1095
BfoI RGCGCY 2 cut(s) 148, 789
BisI GCNGC 4 cut(s) 330, 392, 415, 514
BlsI GCNGC 4 cut(s) 331, 393, 416, 515
Bme1390I CCNGG 7 cut(s) 334, 439, 489, 631, 681, 816, 985
Bme18I GGWCC 2 cut(s) 336, 1052
BmeT110I CYCGRG 1 cut(s) 558
BmgT120I GGNCC 7 cut(s) 103, 240, 301, 336, 515, 605, 1052
BmiI GGNNCC 5 cut(s) 105, 241, 375, 504, 874
BmrFI CCNGG 7 cut(s) 334, 439, 489, 631, 681, 816, 985
BmsI GCATC 1 cut(s) 635
BoxI GACNNNNGTC 1 cut(s) 992
BpiI GAAGAC 1 cut(s) 666
BplI GAGNNNNNCTC 2 cut(s) 945, 977
Bpu10I CCTNAGC 2 cut(s) 108, 1004
Bpu14I TTCGAA 2 cut(s) 541, 597
BpuEI CTTGAG 1 cut(s) 330
BpuMI CCSGG 1 cut(s) 816
Bsa29I ATCGAT 2 cut(s) 69, 525
BsaAI YACGTR 3 cut(s) 829, 992, 1011
BsaJI CCNNGG 7 cut(s) 297, 438, 487, 630, 814, 843, 930
Bsc4I CCNNNNNNNGG 3 cut(s) 383, 512, 680
Bse118I RCCGGY 1 cut(s) 590
Bse21I CCTNAGG 1 cut(s) 234
Bse3DI GCAATG 1 cut(s) 424
BseBI CCWGG 6 cut(s) 334, 439, 489, 631, 681, 985
BseCI ATCGAT 2 cut(s) 69, 525
BseDI CCNNGG 7 cut(s) 297, 438, 487, 630, 814, 843, 930
BseGI GGATG 3 cut(s) 626, 693, 810
BseLI CCNNNNNNNGG 3 cut(s) 383, 512, 680
BseMI GCAATG 1 cut(s) 424
BseMII CTCAG 4 cut(s) 129, 225, 750, 995
BseRI GAGGAG 5 cut(s) 113, 365, 512, 546, 1039
BseSI GKGCMC 2 cut(s) 131, 921
BseXI GCAGC 3 cut(s) 341, 378, 426
BseYI CCCAGC 1 cut(s) 423
BsgI GTGCAG 1 cut(s) 348
BshFI GGCC 7 cut(s) 104, 201, 242, 269, 303, 516, 607
BshNI GGYRCC 1 cut(s) 373
BshVI ATCGAT 2 cut(s) 69, 525
BsiHKAI GWGCWC 4 cut(s) 346, 834, 963, 1010
BsiHKCI CYCGRG 1 cut(s) 558
BsiSI CCGG 3 cut(s) 506, 591, 816
BslFI GGGAC 1 cut(s) 227
BslI CCNNNNNNNGG 3 cut(s) 383, 512, 680
BsmAI GTCTC 3 cut(s) 702, 843, 897
BsmBI CGTCTC 1 cut(s) 843
BsmFI GGGAC 1 cut(s) 227
BsnI GGCC 7 cut(s) 104, 201, 242, 269, 303, 516, 607
BsoBI CYCGRG 1 cut(s) 558
Bsp119I TTCGAA 2 cut(s) 541, 597
Bsp1286I GDGCHC 7 cut(s) 131, 346, 834, 875, 921, 963, 1010
Bsp143I GATC 3 cut(s) 285, 502, 879
BspACI CCGC 2 cut(s) 513, 956
BspANI GGCC 7 cut(s) 104, 201, 242, 269, 303, 516, 607
BspCNI CTCAG 4 cut(s) 128, 226, 749, 996
BspDI ATCGAT 2 cut(s) 69, 525
BspLI GGNNCC 5 cut(s) 105, 241, 375, 504, 874
BspPI GGATC 3 cut(s) 293, 497, 510
BspT104I TTCGAA 2 cut(s) 541, 597
BspT107I GGYRCC 1 cut(s) 373
BsrBI CCGCTC 1 cut(s) 956
BsrDI GCAATG 1 cut(s) 424
BsrFI RCCGGY 1 cut(s) 590
BssAI RCCGGY 1 cut(s) 590
BssECI CCNNGG 7 cut(s) 297, 438, 487, 630, 814, 843, 930
BssMI GATC 3 cut(s) 285, 502, 879
BssT1I CCWWGG 2 cut(s) 297, 930
Bst2UI CCWGG 6 cut(s) 334, 439, 489, 631, 681, 985
Bst4CI ACNGT 2 cut(s) 406, 910
Bst6I CTCTTC 1 cut(s) 1045
BstBAI YACGTR 3 cut(s) 829, 992, 1011
BstBI TTCGAA 2 cut(s) 541, 597
BstC8I GCNNGC 3 cut(s) 511, 856, 898
BstDEI CTNAG 5 cut(s) 108, 115, 234, 736, 1004
BstDSI CCRYGG 1 cut(s) 843
BstF5I GGATG 3 cut(s) 626, 693, 810
BstH2I RGCGCY 2 cut(s) 148, 789
BstHHI GCGC 3 cut(s) 41, 147, 788
BstKTI GATC 3 cut(s) 288, 505, 882
BstMAI GTCTC 3 cut(s) 702, 843, 897
BstMBI GATC 3 cut(s) 285, 502, 879
BstMWI GCNNNNNNNGC 7 cut(s) 45, 229, 420, 449, 469, 478, 800
BstNI CCWGG 6 cut(s) 334, 439, 489, 631, 681, 985
BstNSI RCATGY 2 cut(s) 220, 616
BstPAI GACNNNNGTC 1 cut(s) 992
BstSCI CCNGG 7 cut(s) 332, 437, 487, 629, 679, 814, 983
BstSLI GKGCMC 2 cut(s) 131, 921
BstV1I GCAGC 3 cut(s) 341, 378, 426
BstV2I GAAGAC 1 cut(s) 666
BstX2I RGATCY 1 cut(s) 502
BstXI CCANNNNNNTGG 1 cut(s) 883
BstYI RGATCY 1 cut(s) 502
Bsu15I ATCGAT 2 cut(s) 69, 525
Bsu36I CCTNAGG 1 cut(s) 234
BsuRI GGCC 7 cut(s) 104, 201, 242, 269, 303, 516, 607
BsuTUI ATCGAT 2 cut(s) 69, 525
BtgI CCRYGG 1 cut(s) 843
BtgZI GCGATG 1 cut(s) 1044
BtsCI GGATG 3 cut(s) 626, 693, 810
BtsI GCAGTG 1 cut(s) 714
BtsIMutI CAGTG 3 cut(s) 411, 714, 744
Cac8I GCNNGC 3 cut(s) 511, 856, 898
CaiI CAGNNNCTG 2 cut(s) 339, 383
CfoI GCGC 3 cut(s) 41, 147, 788
Cfr10I RCCGGY 1 cut(s) 590
Cfr13I GGNCC 7 cut(s) 103, 240, 301, 336, 515, 605, 1052
ClaI ATCGAT 2 cut(s) 69, 525
CseI GACGC 1 cut(s) 860
Csp6I GTAC 3 cut(s) 187, 550, 715
CviAII CATG 5 cut(s) 217, 613, 877, 997, 1021
CviQI GTAC 3 cut(s) 187, 550, 715
DdeI CTNAG 5 cut(s) 108, 115, 234, 736, 1004
DpnI GATC 3 cut(s) 287, 504, 881
DpnII GATC 3 cut(s) 285, 502, 879
EaeI YGGCCR 1 cut(s) 199
Eam1104I CTCTTC 1 cut(s) 1045
EarI CTCTTC 1 cut(s) 1045
Eco130I CCWWGG 2 cut(s) 297, 930
Eco147I AGGCCT 1 cut(s) 269
Eco24I GRGCYC 1 cut(s) 875
Eco47I GGWCC 2 cut(s) 336, 1052
Eco72I CACGTG 1 cut(s) 992
Eco81I CCTNAGG 1 cut(s) 234
Eco88I CYCGRG 1 cut(s) 558
EcoO109I RGGNCCY 4 cut(s) 103, 240, 301, 336
EcoRII CCWGG 6 cut(s) 332, 437, 487, 629, 679, 983
EcoT14I CCWWGG 2 cut(s) 297, 930
EcoT38I GRGCYC 1 cut(s) 875
ErhI CCWWGG 2 cut(s) 297, 930
Esp3I CGTCTC 1 cut(s) 843
FaeI CATG 5 cut(s) 220, 616, 880, 1000, 1024
FaqI GGGAC 1 cut(s) 227
FatI CATG 5 cut(s) 216, 612, 876, 996, 1020
Fnu4HI GCNGC 4 cut(s) 330, 392, 415, 514
FokI GGATG 3 cut(s) 613, 700, 797
FriOI GRGCYC 1 cut(s) 875
Fsp4HI GCNGC 4 cut(s) 330, 392, 415, 514
FspBI CTAG 1 cut(s) 1095
GlaI GCGC 3 cut(s) 40, 146, 787
GluI GCNGC 4 cut(s) 330, 392, 415, 514
GsaI CCCAGC 1 cut(s) 427
HaeII RGCGCY 2 cut(s) 148, 789
HaeIII GGCC 7 cut(s) 104, 201, 242, 269, 303, 516, 607
HapII CCGG 3 cut(s) 506, 591, 816
HgaI GACGC 1 cut(s) 860
HhaI GCGC 3 cut(s) 41, 147, 788
Hin1II CATG 5 cut(s) 220, 616, 880, 1000, 1024
Hin6I GCGC 3 cut(s) 39, 145, 786
HinP1I GCGC 3 cut(s) 39, 145, 786
HinfI GANTC 7 cut(s) 380, 428, 527, 636, 695, 722, 926
HpaII CCGG 3 cut(s) 506, 591, 816
Hpy166II GTNNAC 1 cut(s) 1052
Hpy188I TCNGA 3 cut(s) 118, 402, 702
Hpy188III TCNNGA 3 cut(s) 347, 949, 1003
Hpy8I GTNNAC 1 cut(s) 1052
HpyAV CCTTC 1 cut(s) 596
HpyCH4III ACNGT 2 cut(s) 406, 910
HpyCH4IV ACGT 3 cut(s) 828, 991, 1010
HpyCH4V TGCA 4 cut(s) 248, 329, 481, 896
HpyF10VI GCNNNNNNNGC 7 cut(s) 45, 229, 420, 449, 469, 478, 800
HpyF3I CTNAG 5 cut(s) 108, 115, 234, 736, 1004
HpySE526I ACGT 3 cut(s) 828, 991, 1010
Hsp92II CATG 5 cut(s) 220, 616, 880, 1000, 1024
HspAI GCGC 3 cut(s) 39, 145, 786
Kzo9I GATC 3 cut(s) 285, 502, 879
LmnI GCTCC 3 cut(s) 352, 878, 1026
Lsp1109I GCAGC 3 cut(s) 341, 378, 426
LweI GCATC 1 cut(s) 635
MaeI CTAG 1 cut(s) 1095
MaeII ACGT 3 cut(s) 828, 991, 1010
MaeIII GTNAC 1 cut(s) 292
MalI GATC 3 cut(s) 287, 504, 881
MbiI CCGCTC 1 cut(s) 956
MboI GATC 3 cut(s) 285, 502, 879
MboII GAAGA 4 cut(s) 467, 611, 671, 1032
MflI RGATCY 1 cut(s) 502
MhlI GDGCHC 7 cut(s) 131, 346, 834, 875, 921, 963, 1010
MlsI TGGCCA 1 cut(s) 201
MluCI AATT 6 cut(s) 91, 168, 273, 396, 465, 965
MluNI TGGCCA 1 cut(s) 201
MlyI GAGTC 5 cut(s) 374, 645, 704, 716, 935
Mox20I TGGCCA 1 cut(s) 201
MscI TGGCCA 1 cut(s) 201
MseI TTAA 2 cut(s) 192, 276
MslI CAYNNNNRTG 3 cut(s) 134, 368, 881
Msp20I TGGCCA 1 cut(s) 201
MspI CCGG 3 cut(s) 506, 591, 816
MspR9I CCNGG 7 cut(s) 334, 439, 489, 631, 681, 816, 985
MvaI CCWGG 6 cut(s) 334, 439, 489, 631, 681, 985
MwoI GCNNNNNNNGC 7 cut(s) 45, 229, 420, 449, 469, 478, 800
NciI CCSGG 1 cut(s) 816
NdeII GATC 3 cut(s) 285, 502, 879
NlaIII CATG 5 cut(s) 220, 616, 880, 1000, 1024
NlaIV GGNNCC 5 cut(s) 105, 241, 375, 504, 874
NmuCI GTSAC 1 cut(s) 292
NspI RCATGY 2 cut(s) 220, 616
NspV TTCGAA 2 cut(s) 541, 597
OliI CACNNNNGTG 1 cut(s) 134
PaeR7I CTCGAG 1 cut(s) 558
PceI AGGCCT 1 cut(s) 269
PciI ACATGT 2 cut(s) 216, 612
PfeI GAWTC 2 cut(s) 428, 527
PflFI GACNNNGTC 1 cut(s) 908
PflMI CCANNNNNTGG 1 cut(s) 383
PkrI GCNGC 4 cut(s) 331, 393, 416, 515
PleI GAGTC 5 cut(s) 374, 644, 703, 716, 934
PmaCI CACGTG 1 cut(s) 992
PmlI CACGTG 1 cut(s) 992
PpsI GAGTC 5 cut(s) 374, 644, 703, 716, 934
Ppu21I YACGTR 3 cut(s) 829, 992, 1011
PpuMI RGGWCCY 1 cut(s) 336
PscI ACATGT 2 cut(s) 216, 612
PshAI GACNNNNGTC 1 cut(s) 992
Psp5II RGGWCCY 1 cut(s) 336
Psp6I CCWGG 6 cut(s) 332, 437, 487, 629, 679, 983
PspCI CACGTG 1 cut(s) 992
PspFI CCCAGC 1 cut(s) 423
PspGI CCWGG 6 cut(s) 332, 437, 487, 629, 679, 983
PspN4I GGNNCC 5 cut(s) 105, 241, 375, 504, 874
PspPI GGNCC 7 cut(s) 103, 240, 301, 336, 515, 605, 1052
PspPPI RGGWCCY 1 cut(s) 336
PspXI VCTCGAGB 1 cut(s) 558
PstNI CAGNNNCTG 2 cut(s) 339, 383
PsuI RGATCY 1 cut(s) 502
PsyI GACNNNGTC 1 cut(s) 908
RsaI GTAC 3 cut(s) 188, 551, 716
RsaNI GTAC 3 cut(s) 187, 550, 715
RseI CAYNNNNRTG 3 cut(s) 134, 368, 881
SaqAI TTAA 2 cut(s) 192, 276
SatI GCNGC 4 cut(s) 330, 392, 415, 514
Sau3AI GATC 3 cut(s) 285, 502, 879
Sau96I GGNCC 7 cut(s) 103, 240, 301, 336, 515, 605, 1052
SchI GAGTC 5 cut(s) 374, 645, 704, 716, 935
ScrFI CCNGG 7 cut(s) 334, 439, 489, 631, 681, 816, 985
SduI GDGCHC 7 cut(s) 131, 346, 834, 875, 921, 963, 1010
SetI ASST 9 cut(s) 341, 454, 474, 768, 827, 831, 994, 1013, 1057
SfaNI GCATC 1 cut(s) 635
Sfr274I CTCGAG 1 cut(s) 558
SfuI TTCGAA 2 cut(s) 541, 597
SinI GGWCC 2 cut(s) 336, 1052
SlaI CTCGAG 1 cut(s) 558
SmiMI CAYNNNNRTG 3 cut(s) 134, 368, 881
SmlI CTYRAG 2 cut(s) 345, 558
SmoI CTYRAG 2 cut(s) 345, 558
Sse9I AATT 6 cut(s) 91, 168, 273, 396, 465, 965
SseBI AGGCCT 1 cut(s) 269
SsiI CCGC 2 cut(s) 513, 956
SspMI CTAG 1 cut(s) 1095
StuI AGGCCT 1 cut(s) 269
StyD4I CCNGG 7 cut(s) 332, 437, 487, 629, 679, 814, 983
StyI CCWWGG 2 cut(s) 297, 930
TaaI ACNGT 2 cut(s) 406, 910
TaiI ACGT 3 cut(s) 831, 994, 1013
TaqI TCGA 7 cut(s) 69, 495, 525, 530, 541, 559, 597
TasI AATT 6 cut(s) 91, 168, 273, 396, 465, 965
TatI WGTACW 2 cut(s) 186, 714
TauI GCSGC 1 cut(s) 516
TfiI GAWTC 2 cut(s) 428, 527
Tru1I TTAA 2 cut(s) 192, 276
Tru9I TTAA 2 cut(s) 192, 276
TscAI CASTG 3 cut(s) 411, 714, 744
TseFI GTSAC 1 cut(s) 292
TseI GCWGC 3 cut(s) 329, 391, 414
Tsp45I GTSAC 1 cut(s) 292
TspGWI ACGGA 1 cut(s) 832
TspRI CASTG 3 cut(s) 411, 714, 744
Tth111I GACNNNGTC 1 cut(s) 908
Van91I CCANNNNNTGG 1 cut(s) 383
VpaK11BI GGWCC 2 cut(s) 336, 1052
XapI RAATTY 3 cut(s) 91, 168, 965
XceI RCATGY 2 cut(s) 220, 616
XcmI CCANNNNNNNNNTGG 2 cut(s) 627, 681
XhoI CTCGAG 1 cut(s) 558
XspI CTAG 1 cut(s) 1095
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.