Rorug06G0281900

Protein of unknown function (DUF642)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0009179
Physical Location & Seq
Reverse (-)
42966114 .. 42973248
7135 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0281900.1

Sequence Viewer

Length: 1818 bp
ATGAAGAGGCAAAATCTCCACAAGTTAAGTGGTGCTCTGAAATTGGATGTGTTGATAATGTATGAGTTCTGCAACGATTTTGATTGCTTGGAATTGGATGTGTCCAGTTTGAATGATCTGCAATTGGATGTGTTGAGTTTGATATTTGATATTAATGACGATGGTGGCTGGGGACTACACATCGAAGGACTTGCAGGGCTTTGGTTCCAGTTTTCTGTGATGGGTAATGCTCGAGCCATTGGTGCGTTTCCGGTGCTTGTGTTAGTCCAGTTCTTTGTTATTGCAGCAGAGGCAAACACTCAGGAATATGGTTATATGCAGATTCTTATGGATGAGTGGAATATAAAACCTCCTAGTTGGGTGAGTGCCGATCCTTGTGACGGCTGGGAAGGTATTAAGTGCACCAATTCACGCAACACTACCTTTGAGATGAGAATGGCTATAGTTCTTTTCAATGTTATTTTTCAAGGTTCTCGGTTTACGAACTTTGTGGGAATACTTAGCCAAGGACTAAGAATAGCTCCTCCTGAAGCTCCAGCTACTGGTTATATGTATATGGATAAACCTCCTAAGGGAAAGCACTCTACGAAGGGACTTGGCAAGAAAAAACCTGAGTCGGACTATGTTAAATGGAGAGATGATGTCACTGTGCCCTGCGGCAAACCAGTGGATTCACATGTCAGGGCCTCTGAGCTGATGTATAATGAGTATATTGTTTATGATACAGCTCAAATTAAGTATCACTCTCCTGAAGAGGAAATAGCCTTTGGTCCTCCTGCTTGTTGGTTATGGGACTATTTAAGAAGAAGTGGAGCTTCTGGGTTTCTGCTACCCCTTTCTGGTGGAGCAGATAGCTCGTCTGTGGCTGCCATAGTTGGCTGCATGTGTCAGCTTGTGGTAAAAGTAACTTGGTTTTACTGCAGCTCCGACTCGACAAAATCACGGGCAAAGGTTCTAGCAGATGAAATTGGCGCATGGCATCTTGATATCAGTATAGATGGTGTTATTTCTGCACTTCTGACGCTGTTTCAAGCAGTGACAGGAAAACGACCACGATATAAGATAGATGGAGGATCTAATGCTGAGAACTTAGGTTTGCAAAACATTCAAGCACGAATCCGAATGGTGCTGGCTTTTATGTTTGCATCACTTCTACCTTGGGTTCATAACAAACCTGGATTTTATCTTGTTCTGGGTAGTTCCAATGTGGATGAAGGATCGGAGAGGGGCTCCTATATATTATCAATAATAAACATACAATTCTCTCTCCCAATAGCTAAACCAAAGGGGAGGAAGGAAATCAAGCGTAAGATTGTTACCGGCGGTGGTGAAGGAAGTTCTGGAGTCAGCAAGGCACCTGTGCCTGAGCTGGTGGAGACTGGCAGTGAACCATCTTCGGGAGGTCCAGGGCAGGAGCTGATTGGCAGTGGTAGTTCTGTGGAGAAGGAGATGTTGGAGGCAGCTCCGAGTTGTGGTATGCGTCGGAAACGTGTGGATGAAGAGGTTAGCTCTCCAAAGAAGCTGCGCCTGAGTCTAGCAGTAGGTAGGACAAACTTGGATGCTATGACAATGGGATTGTGTCCTGTGAAACCTATGAAGGAAGTATACAAAAAGAGGCCGGGAAGGCCAAAGGGGGCAAAGAATAAGGCAAAGGAGCTTAAGGTAGTGCATGCTTCCCCTATGAAGAAGTCACCGGCAAAGAAGATCAAGACTCCTAGGAAGGAGGAGAAATTGGTGAATGGTTTACTGGAGTTCACCGTGGTGGAAGCAGTTCATGGTTCCGACCCATCAAAGGGTAAGGAACCAATAGTTGTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF642

Protein Analysis

605

Amino Acids

66.38

Weight (kDa)

8.79

Isoelectric Point (pI)

44.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PARP PF00644 153 - 185 1.5e-08 Poly(ADP-ribose) polymerase catalytic domain
PARP PF00644 185 - 246 2.8e-15 Poly(ADP-ribose) polymerase catalytic domain
NAD_synthase PF02540 262 - 384 6.9e-10 NAD synthase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0009179)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G32460 AT4G32460 AT4G32460 AT4G32460 AT5G11420 AT5G25460
fragaria_vesca FvH4_2g29680
malus_domestica MD08G1143200.v1.1 MD15G1120000.v1.1
prunus_persica Prupe.1G472800_v2.0.a1
pyrus_communis pycom08g12190 pycom15g10810
rosa_chinensis RchiOBHm_Chr6g0298661
rosa_laevigata RLG00000011495
rosa_multiflora Rmu_sc0008099.1_g000008
rosa_roxburghii Rroxscaffold_7G00169440
rosa_rugosa Rorug06G0281900 Rorug06G0282000
rosa_samantha Rh6AG393500 Rh6BG401300 Rh6DG393900
rosa_wichuraiana Rw6G034410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1354
AccB7I CCANNNNNTGG 1 cut(s) 542
AccI GTMKAC 1 cut(s) 1605
AciI CCGC 2 cut(s) 657, 1323
AclWI GGATC 3 cut(s) 365, 1081, 1225
AcuI CTGAAG 2 cut(s) 549, 771
AfiI CCNNNNNNNGG 8 cut(s) 380, 542, 572, 839, 1397, 1472, 1792, 1793
AflII CTTAAG 1 cut(s) 1658
AflIII ACRYGT 2 cut(s) 676, 1489
AgsI TTSAA 5 cut(s) 112, 454, 467, 1031, 1109
AjnI CCWGG 2 cut(s) 1174, 1405
AjuI GAANNNNNNNTTGG 4 cut(s) 750, 782, 1436, 1468
AleI CACNNNNGTG 1 cut(s) 1760
Alw21I GWGCWC 2 cut(s) 37, 404
Alw26I GTCTC 1 cut(s) 1370
Alw44I GTGCAC 1 cut(s) 400
AlwI GGATC 3 cut(s) 365, 1081, 1225
AlwNI CAGNNNCTG 2 cut(s) 542, 1417
Ama87I CYCGRG 1 cut(s) 231
AoxI GGCC 3 cut(s) 684, 1616, 1625
ApaLI GTGCAC 1 cut(s) 400
ApeKI GCWGC 6 cut(s) 284, 866, 879, 921, 1460, 1522
AseI ATTAAT 1 cut(s) 153
Asp700I GAANNNNTTC 1 cut(s) 1770
AspA2I CCTAGG 1 cut(s) 1715
AspLEI GCGC 2 cut(s) 974, 1527
AspS9I GGNCC 3 cut(s) 684, 770, 1403
AsuC2I CCSGG 1 cut(s) 1620
AsuHPI GGTGA 5 cut(s) 373, 1340, 1683, 1747, 1747
AvaI CYCGRG 1 cut(s) 231
AvaII GGWCC 2 cut(s) 770, 1403
AvrII CCTAGG 1 cut(s) 1715
AxyI CCTNAGG 1 cut(s) 570
BaeGI GKGCMC 2 cut(s) 404, 654
BanI GGYRCC 1 cut(s) 1354
BanII GRGCYC 1 cut(s) 1232
BarI GAAGNNNNNNTAC 2 cut(s) 1589, 1621
Bbv12I GWGCWC 2 cut(s) 37, 404
BbvI GCAGC 6 cut(s) 296, 853, 866, 933, 1472, 1509
BccI CCATC 6 cut(s) 155, 214, 992, 1061, 1399, 1795
BceAI ACGGC 1 cut(s) 397
BcgI CGANNNNNNTGC 4 cut(s) 173, 207, 837, 871
BciT130I CCWGG 2 cut(s) 1176, 1407
BcnI CCSGG 1 cut(s) 1620
BcoDI GTCTC 1 cut(s) 1370
BfaI CTAG 4 cut(s) 354, 956, 1535, 1716
BfmI CTRYAG 2 cut(s) 441, 919
BfrI CTTAAG 1 cut(s) 1658
BglI GCCNNNNNGGC 1 cut(s) 1624
BisI GCNGC 7 cut(s) 285, 658, 867, 880, 922, 1461, 1523
BlnI CCTAGG 1 cut(s) 1715
BlsI GCNGC 7 cut(s) 286, 659, 868, 881, 923, 1462, 1524
Bme1390I CCNGG 3 cut(s) 1176, 1407, 1620
Bme18I GGWCC 2 cut(s) 770, 1403
BmeT110I CYCGRG 1 cut(s) 231
BmgT120I GGNCC 3 cut(s) 684, 770, 1403
BmiI GGNNCC 5 cut(s) 206, 1231, 1356, 1780, 1803
BmrFI CCNGG 3 cut(s) 1176, 1407, 1620
BmsI GCATC 3 cut(s) 988, 1154, 1549
BplI GAGNNNNNCTC 4 cut(s) 1214, 1246, 1493, 1525
BpmI CTGGAG 3 cut(s) 519, 1362, 1769
Bpu10I CCTNAGC 1 cut(s) 1365
BpuMI CCSGG 1 cut(s) 1620
BsaJI CCNNGG 5 cut(s) 505, 1157, 1406, 1715, 1758
BsaWI WCCGGW 1 cut(s) 250
BsaXI ACNNNNNCTCC 2 cut(s) 908, 938
Bsc4I CCNNNNNNNGG 8 cut(s) 380, 542, 572, 839, 1397, 1472, 1792, 1793
Bse118I RCCGGY 2 cut(s) 1319, 1693
Bse1I ACTGG 7 cut(s) 105, 208, 268, 547, 665, 1384, 1752
Bse21I CCTNAGG 1 cut(s) 570
BseBI CCWGG 2 cut(s) 1176, 1407
BseDI CCNNGG 5 cut(s) 505, 1157, 1406, 1715, 1758
BseGI GGATG 7 cut(s) 52, 103, 133, 337, 1216, 1501, 1564
BseLI CCNNNNNNNGG 8 cut(s) 380, 542, 572, 839, 1397, 1472, 1792, 1793
BseMII CTCAG 6 cut(s) 314, 603, 681, 1074, 1356, 1520
BseNI ACTGG 7 cut(s) 105, 208, 268, 547, 665, 1384, 1752
BseRI GAGGAG 2 cut(s) 513, 1739
BseSI GKGCMC 2 cut(s) 404, 654
BseXI GCAGC 6 cut(s) 296, 853, 866, 933, 1472, 1509
BseYI CCCAGC 2 cut(s) 168, 384
BsgI GTGCAG 1 cut(s) 996
BshFI GGCC 3 cut(s) 686, 1618, 1627
BshNI GGYRCC 1 cut(s) 1354
BsiHKAI GWGCWC 2 cut(s) 37, 404
BsiHKCI CYCGRG 1 cut(s) 231
BsiSI CCGG 4 cut(s) 251, 1320, 1619, 1694
BslFI GGGAC 3 cut(s) 186, 606, 806
BslI CCNNNNNNNGG 8 cut(s) 380, 542, 572, 839, 1397, 1472, 1792, 1793
BsmAI GTCTC 1 cut(s) 1370
BsmFI GGGAC 3 cut(s) 186, 606, 806
BsnI GGCC 3 cut(s) 686, 1618, 1627
BsoBI CYCGRG 1 cut(s) 231
Bsp1286I GDGCHC 4 cut(s) 37, 404, 654, 1232
Bsp143I GATC 5 cut(s) 115, 370, 1073, 1217, 1704
BspACI CCGC 2 cut(s) 657, 1323
BspANI GGCC 3 cut(s) 686, 1618, 1627
BspCNI CTCAG 6 cut(s) 313, 604, 682, 1075, 1357, 1521
BspLI GGNNCC 5 cut(s) 206, 1231, 1356, 1780, 1803
BspMAI CTGCAG 1 cut(s) 923
BspPI GGATC 3 cut(s) 365, 1081, 1225
BspT107I GGYRCC 1 cut(s) 1354
BspTI CTTAAG 1 cut(s) 1658
BsrFI RCCGGY 2 cut(s) 1319, 1693
BsrI ACTGG 7 cut(s) 105, 208, 268, 547, 665, 1384, 1752
BssAI RCCGGY 2 cut(s) 1319, 1693
BssECI CCNNGG 5 cut(s) 505, 1157, 1406, 1715, 1758
BssMI GATC 5 cut(s) 115, 370, 1073, 1217, 1704
BssNAI GTATAC 1 cut(s) 1606
BssT1I CCWWGG 3 cut(s) 505, 1157, 1715
Bst1107I GTATAC 1 cut(s) 1606
Bst2UI CCWGG 2 cut(s) 1176, 1407
Bst4CI ACNGT 2 cut(s) 649, 1759
Bst6I CTCTTC 2 cut(s) 747, 1494
BstAFI CTTAAG 1 cut(s) 1658
BstC8I GCNNGC 2 cut(s) 1131, 1671
BstDSI CCRYGG 1 cut(s) 1758
BstF5I GGATG 7 cut(s) 52, 103, 133, 337, 1216, 1501, 1564
BstHHI GCGC 2 cut(s) 974, 1527
BstKTI GATC 5 cut(s) 118, 373, 1076, 1220, 1707
BstMAI GTCTC 1 cut(s) 1370
BstMBI GATC 5 cut(s) 115, 370, 1073, 1217, 1704
BstMWI GCNNNNNNNGC 3 cut(s) 242, 290, 1624
BstNI CCWGG 2 cut(s) 1176, 1407
BstNSI RCATGY 3 cut(s) 680, 886, 1673
BstSCI CCNGG 3 cut(s) 1174, 1405, 1618
BstSFI CTRYAG 2 cut(s) 441, 919
BstSLI GKGCMC 2 cut(s) 404, 654
BstV1I GCAGC 6 cut(s) 296, 853, 866, 933, 1472, 1509
BstX2I RGATCY 1 cut(s) 1073
BstYI RGATCY 1 cut(s) 1073
BstZ17I GTATAC 1 cut(s) 1606
Bsu36I CCTNAGG 1 cut(s) 570
BsuRI GGCC 3 cut(s) 686, 1618, 1627
BtgI CCRYGG 1 cut(s) 1758
BtsCI GGATG 7 cut(s) 52, 103, 133, 337, 1216, 1501, 1564
BtsI GCAGTG 3 cut(s) 1041, 1390, 1432
BtsIMutI CAGTG 5 cut(s) 645, 672, 1041, 1390, 1432
Cac8I GCNNGC 2 cut(s) 1131, 1671
CaiI CAGNNNCTG 2 cut(s) 542, 1417
CfoI GCGC 2 cut(s) 974, 1527
Cfr10I RCCGGY 2 cut(s) 1319, 1693
Cfr13I GGNCC 3 cut(s) 684, 770, 1403
CseI GACGC 2 cut(s) 1030, 1469
CspCI CAANNNNNGTGG 2 cut(s) 10, 45
CviAII CATG 5 cut(s) 677, 883, 975, 1670, 1775
DpnI GATC 5 cut(s) 117, 372, 1075, 1219, 1706
DpnII GATC 5 cut(s) 115, 370, 1073, 1217, 1704
Eam1104I CTCTTC 2 cut(s) 747, 1494
EarI CTCTTC 2 cut(s) 747, 1494
Eco130I CCWWGG 3 cut(s) 505, 1157, 1715
Eco24I GRGCYC 1 cut(s) 1232
Eco32I GATATC 1 cut(s) 988
Eco47I GGWCC 2 cut(s) 770, 1403
Eco57I CTGAAG 2 cut(s) 549, 771
Eco81I CCTNAGG 1 cut(s) 570
Eco88I CYCGRG 1 cut(s) 231
EcoO109I RGGNCCY 1 cut(s) 684
EcoRII CCWGG 2 cut(s) 1174, 1405
EcoRV GATATC 1 cut(s) 988
EcoT14I CCWWGG 3 cut(s) 505, 1157, 1715
EcoT38I GRGCYC 1 cut(s) 1232
ErhI CCWWGG 3 cut(s) 505, 1157, 1715
FaeI CATG 5 cut(s) 680, 886, 978, 1673, 1778
FalI AAGNNNNNCTT 2 cut(s) 799, 831
FaqI GGGAC 3 cut(s) 186, 606, 806
FatI CATG 5 cut(s) 676, 882, 974, 1669, 1774
FblI GTMKAC 1 cut(s) 1605
Fnu4HI GCNGC 7 cut(s) 285, 658, 867, 880, 922, 1461, 1523
FokI GGATG 7 cut(s) 59, 110, 140, 344, 1223, 1508, 1571
FriOI GRGCYC 1 cut(s) 1232
Fsp4HI GCNGC 7 cut(s) 285, 658, 867, 880, 922, 1461, 1523
FspBI CTAG 4 cut(s) 354, 956, 1535, 1716
GlaI GCGC 2 cut(s) 973, 1526
GluI GCNGC 7 cut(s) 285, 658, 867, 880, 922, 1461, 1523
GsaI CCCAGC 2 cut(s) 172, 388
GsuI CTGGAG 3 cut(s) 519, 1362, 1769
HaeIII GGCC 3 cut(s) 686, 1618, 1627
HapII CCGG 4 cut(s) 251, 1320, 1619, 1694
HgaI GACGC 2 cut(s) 1030, 1469
HhaI GCGC 2 cut(s) 974, 1527
Hin1II CATG 5 cut(s) 680, 886, 978, 1673, 1778
Hin6I GCGC 2 cut(s) 972, 1525
HinP1I GCGC 2 cut(s) 972, 1525
HinfI GANTC 8 cut(s) 322, 614, 671, 929, 1116, 1344, 1531, 1711
HpaII CCGG 4 cut(s) 251, 1320, 1619, 1694
HphI GGTGA 5 cut(s) 373, 1340, 1683, 1747, 1747
Hpy166II GTNNAC 6 cut(s) 402, 480, 1388, 1606, 1745, 1755
Hpy188III TCNNGA 7 cut(s) 302, 527, 749, 983, 1341, 1398, 1708
Hpy8I GTNNAC 6 cut(s) 402, 480, 1388, 1606, 1745, 1755
Hpy99I CGWCG 1 cut(s) 1485
HpyCH4III ACNGT 2 cut(s) 649, 1759
HpyCH4IV ACGT 1 cut(s) 1489
HpyF10VI GCNNNNNNNGC 3 cut(s) 242, 290, 1624
HpySE526I ACGT 1 cut(s) 1489
Hsp92II CATG 5 cut(s) 680, 886, 978, 1673, 1778
HspAI GCGC 2 cut(s) 972, 1525
Kzo9I GATC 5 cut(s) 115, 370, 1073, 1217, 1704
LmnI GCTCC 9 cut(s) 526, 538, 812, 845, 929, 1235, 1414, 1468, 1654
Lsp1109I GCAGC 6 cut(s) 296, 853, 866, 933, 1472, 1509
LweI GCATC 3 cut(s) 988, 1154, 1549
MaeI CTAG 4 cut(s) 354, 956, 1535, 1716
MaeII ACGT 1 cut(s) 1489
MaeIII GTNAC 6 cut(s) 377, 643, 904, 1036, 1315, 1689
MalI GATC 5 cut(s) 117, 372, 1075, 1219, 1706
MboI GATC 5 cut(s) 115, 370, 1073, 1217, 1704
MboII GAAGA 7 cut(s) 16, 764, 816, 1386, 1511, 1696, 1714
MfeI CAATTG 1 cut(s) 122
MflI RGATCY 1 cut(s) 1073
MhlI GDGCHC 4 cut(s) 37, 404, 654, 1232
MluCI AATT 8 cut(s) 41, 92, 122, 406, 732, 966, 1259, 1730
MlyI GAGTC 5 cut(s) 623, 923, 1353, 1540, 1705
MmeI TCCRAC 5 cut(s) 597, 951, 1434, 1463, 1806
MroXI GAANNNNTTC 1 cut(s) 1770
MseI TTAA 7 cut(s) 26, 153, 396, 627, 735, 800, 1659
MslI CAYNNNNRTG 1 cut(s) 1760
MspCI CTTAAG 1 cut(s) 1658
MspI CCGG 4 cut(s) 251, 1320, 1619, 1694
MspR9I CCNGG 3 cut(s) 1176, 1407, 1620
MunI CAATTG 1 cut(s) 122
MvaI CCWGG 2 cut(s) 1176, 1407
MwoI GCNNNNNNNGC 3 cut(s) 242, 290, 1624
NciI CCSGG 1 cut(s) 1620
NdeII GATC 5 cut(s) 115, 370, 1073, 1217, 1704
NlaIII CATG 5 cut(s) 680, 886, 978, 1673, 1778
NlaIV GGNNCC 5 cut(s) 206, 1231, 1356, 1780, 1803
NmuCI GTSAC 4 cut(s) 377, 643, 1036, 1689
NspI RCATGY 3 cut(s) 680, 886, 1673
OliI CACNNNNGTG 1 cut(s) 1760
PaeI GCATGC 1 cut(s) 1673
PaeR7I CTCGAG 1 cut(s) 231
PciI ACATGT 1 cut(s) 676
PdmI GAANNNNTTC 1 cut(s) 1770
PfeI GAWTC 3 cut(s) 322, 671, 1116
PflMI CCANNNNNTGG 1 cut(s) 542
PkrI GCNGC 7 cut(s) 286, 659, 868, 881, 923, 1462, 1524
PleI GAGTC 5 cut(s) 622, 923, 1352, 1539, 1705
PpsI GAGTC 5 cut(s) 622, 923, 1352, 1539, 1705
PscI ACATGT 1 cut(s) 676
PshBI ATTAAT 1 cut(s) 153
Psp6I CCWGG 2 cut(s) 1174, 1405
PspFI CCCAGC 2 cut(s) 168, 384
PspGI CCWGG 2 cut(s) 1174, 1405
PspN4I GGNNCC 5 cut(s) 206, 1231, 1356, 1780, 1803
PspPI GGNCC 3 cut(s) 684, 770, 1403
PspXI VCTCGAGB 1 cut(s) 231
PstI CTGCAG 1 cut(s) 923
PstNI CAGNNNCTG 2 cut(s) 542, 1417
PsuI RGATCY 1 cut(s) 1073
RseI CAYNNNNRTG 1 cut(s) 1760
SaqAI TTAA 7 cut(s) 26, 153, 396, 627, 735, 800, 1659
SatI GCNGC 7 cut(s) 285, 658, 867, 880, 922, 1461, 1523
Sau3AI GATC 5 cut(s) 115, 370, 1073, 1217, 1704
Sau96I GGNCC 3 cut(s) 684, 770, 1403
SchI GAGTC 5 cut(s) 623, 923, 1353, 1540, 1705
ScrFI CCNGG 3 cut(s) 1176, 1407, 1620
SduI GDGCHC 4 cut(s) 37, 404, 654, 1232
SfaNI GCATC 3 cut(s) 988, 1154, 1549
SfcI CTRYAG 2 cut(s) 441, 919
SfiI GGCCNNNNNGGCC 1 cut(s) 1624
Sfr274I CTCGAG 1 cut(s) 231
SinI GGWCC 2 cut(s) 770, 1403
SlaI CTCGAG 1 cut(s) 231
SmiMI CAYNNNNRTG 1 cut(s) 1760
SmlI CTYRAG 2 cut(s) 231, 1658
SmoI CTYRAG 2 cut(s) 231, 1658
SphI GCATGC 1 cut(s) 1673
Sse9I AATT 8 cut(s) 41, 92, 122, 406, 732, 966, 1259, 1730
SsiI CCGC 2 cut(s) 657, 1323
SspMI CTAG 4 cut(s) 354, 956, 1535, 1716
StyD4I CCNGG 3 cut(s) 1174, 1405, 1618
StyI CCWWGG 3 cut(s) 505, 1157, 1715
TaaI ACNGT 2 cut(s) 649, 1759
TaiI ACGT 1 cut(s) 1492
TaqI TCGA 3 cut(s) 183, 232, 932
TasI AATT 8 cut(s) 41, 92, 122, 406, 732, 966, 1259, 1730
TauI GCSGC 1 cut(s) 660
TfiI GAWTC 3 cut(s) 322, 671, 1116
Tru1I TTAA 7 cut(s) 26, 153, 396, 627, 735, 800, 1659
Tru9I TTAA 7 cut(s) 26, 153, 396, 627, 735, 800, 1659
TscAI CASTG 5 cut(s) 652, 672, 1041, 1390, 1432
TseFI GTSAC 4 cut(s) 377, 643, 1036, 1689
TseI GCWGC 6 cut(s) 284, 866, 879, 921, 1460, 1522
Tsp45I GTSAC 4 cut(s) 377, 643, 1036, 1689
TspDTI ATGAA 8 cut(s) 17, 978, 1154, 1227, 1512, 1610, 1697, 1763
TspRI CASTG 5 cut(s) 652, 672, 1041, 1390, 1432
Van91I CCANNNNNTGG 1 cut(s) 542
Vha464I CTTAAG 1 cut(s) 1658
VneI GTGCAC 1 cut(s) 400
VpaK11BI GGWCC 2 cut(s) 770, 1403
VspI ATTAAT 1 cut(s) 153
XceI RCATGY 3 cut(s) 680, 886, 1673
XcmI CCANNNNNNNNNTGG 1 cut(s) 26
XhoI CTCGAG 1 cut(s) 231
XmaJI CCTAGG 1 cut(s) 1715
XmiI GTMKAC 1 cut(s) 1605
XmnI GAANNNNTTC 1 cut(s) 1770
XspI CTAG 4 cut(s) 354, 956, 1535, 1716
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.