Prupe.1G490000_v2.0.a1

Belongs to the iron ascorbate-dependent oxidoreductase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0015080
Physical Location & Seq
Reverse (-)
40784377 .. 40787208
2832 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G490000.1

Sequence Viewer

Length: 759 bp
ATGGCAATCCCAGTTATTGATTTCTCAAAGCTTGATGGTGAAGAAAGGGCCCAAACGTTGGCTCAGCTTGCTAATGGATGTGAGGAATGGGGCTTCTTCCAGCTGGTGAACCATGGAATTTCAGATGAGCTTCTGGAGAGGGTAAAGAAGGTGAGCTCTGAGTGCTTTAAACTGGAAAGAGAGGAGGAATTCAAGAAGTCTGCACTTGTGAAGTCATTGAATGGCCAAAAGTTGGAGAACGTGGACTGGGAGGATGTCTTCACCCTCCTGGATGATAATGAATGGCCCTCGAAAACCCCTGGATTCAAGGAAACCATGACAGAGTACAGGACAGAACTGAAGAAACTAGCTGAGAGGATCATGGAAGTGATGGATGAGAACTTGGGCTTACCAAAGGGATACATCAAGAGAGCATTCAATGGTGGAGAAGAAGACAATGCCTTCTTTGGCACCAAGGTGAGCCACTACCCACCATGCCCTCAGCCAGAGTTGGTGACTGGTCTCCGAGCTCACACCGATGCCGGGGGTGTCATCTTACTCTTCCAAGATGACCAGGTGGGAGGCCTTCAAATCCTCAAAGATGGGCAATGGATAGATGTGCAGCCATTGCACAACTCTATTGTCATTAACACAGGGGACCAAATTGAGGTCCTGAGCAATGGCCTCTACAAGAGTGTTTGGCACCGGGTTTTAGCCACCACAACTGGAAACAGAAGATCATTGCTTCATTCTACAACCCATCACTCAAGGCCACCATAG

Protein Analysis

253

Amino Acids

28.48

Weight (kDa)

5.24

Isoelectric Point (pI)

32.21

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0015080)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G77330
fragaria_vesca FvH4_2g27800
malus_domestica MD08G1160900.v1.1
prunus_persica Prupe.1G490000_v2.0.a1
pyrus_communis pycom348g00080
rosa_chinensis RchiOBHm_Chr6g0296661
rosa_laevigata RLG00000011672
rosa_multiflora Rmu_sc0001741.1_g000013
rosa_roxburghii Rroxscaffold_7G00171280
rosa_rugosa Rorug06G0264000
rosa_samantha Rh6AG375800 Rh6BG384100 Rh6CG389200 Rh6DG376600
rosa_wichuraiana Rw6G032760 Rw6G032850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 449, 681
AccB7I CCANNNNNTGG 2 cut(s) 58, 232
AclI AACGTT 1 cut(s) 56
AclWI GGATC 1 cut(s) 365
AcoI YGGCCR 1 cut(s) 223
AcsI RAATTY 2 cut(s) 117, 188
AcuI CTGAAG 1 cut(s) 359
AfaI GTAC 1 cut(s) 326
AfiI CCNNNNNNNGG 4 cut(s) 58, 232, 522, 646
AgsI TTSAA 5 cut(s) 193, 220, 307, 418, 569
AjnI CCWGG 3 cut(s) 267, 298, 552
AleI CACNNNNGTG 1 cut(s) 455
AluBI AGCT 7 cut(s) 31, 67, 103, 130, 156, 350, 509
AluI AGCT 7 cut(s) 31, 67, 103, 130, 156, 350, 509
Alw21I GWGCWC 2 cut(s) 158, 511
Alw26I GTCTC 1 cut(s) 506
AlwI GGATC 1 cut(s) 365
AoxI GGCC 6 cut(s) 48, 223, 284, 562, 661, 749
ApaI GGGCCC 1 cut(s) 52
ApeKI GCWGC 1 cut(s) 601
ApoI RAATTY 2 cut(s) 117, 188
AspS9I GGNCC 5 cut(s) 48, 49, 285, 637, 649
AsuC2I CCSGG 2 cut(s) 523, 686
AsuHPI GGTGA 6 cut(s) 50, 118, 163, 253, 469, 505
AvaII GGWCC 2 cut(s) 637, 649
BaeGI GKGCMC 1 cut(s) 52
BalI TGGCCA 1 cut(s) 225
BanI GGYRCC 2 cut(s) 449, 681
BanII GRGCYC 3 cut(s) 52, 158, 511
BbsI GAAGAC 2 cut(s) 250, 438
Bbv12I GWGCWC 2 cut(s) 158, 511
BbvCI CCTCAGC 1 cut(s) 480
BbvI GCAGC 1 cut(s) 613
BccI CCATC 4 cut(s) 29, 364, 575, 747
BciT130I CCWGG 3 cut(s) 269, 300, 554
BciVI GTATCC 1 cut(s) 392
BcnI CCSGG 2 cut(s) 523, 686
BcoDI GTCTC 1 cut(s) 506
BfaI CTAG 1 cut(s) 347
BfuI GTATCC 1 cut(s) 392
BisI GCNGC 1 cut(s) 602
BlpI GCTNAGC 1 cut(s) 63
BlsI GCNGC 1 cut(s) 603
Bme1390I CCNGG 5 cut(s) 269, 300, 523, 554, 686
Bme18I GGWCC 2 cut(s) 637, 649
BmgT120I GGNCC 5 cut(s) 48, 49, 285, 637, 649
BmiI GGNNCC 4 cut(s) 50, 451, 638, 683
BmrFI CCNGG 5 cut(s) 269, 300, 523, 554, 686
BmrI ACTGGG 2 cut(s) 5, 256
BmsI GCATC 1 cut(s) 508
BmuI ACTGGG 2 cut(s) 5, 256
BpiI GAAGAC 2 cut(s) 250, 438
BpmI CTGGAG 1 cut(s) 155
Bpu10I CCTNAGC 2 cut(s) 480, 653
Bpu1102I GCTNAGC 1 cut(s) 63
BpuEI CTTGAG 1 cut(s) 730
BpuMI CCSGG 2 cut(s) 523, 686
BsaI GGTCTC 1 cut(s) 506
BsaJI CCNNGG 4 cut(s) 112, 298, 453, 522
Bsc4I CCNNNNNNNGG 4 cut(s) 58, 232, 522, 646
Bse1I ACTGG 5 cut(s) 11, 177, 251, 502, 709
Bse3DI GCAATG 4 cut(s) 593, 605, 664, 719
BseBI CCWGG 3 cut(s) 269, 300, 554
BseDI CCNNGG 4 cut(s) 112, 298, 453, 522
BseGI GGATG 4 cut(s) 83, 259, 277, 379
BseLI CCNNNNNNNGG 4 cut(s) 58, 232, 522, 646
BseMI GCAATG 4 cut(s) 593, 605, 664, 719
BseMII CTCAG 5 cut(s) 77, 150, 342, 494, 644
BseNI ACTGG 5 cut(s) 11, 177, 251, 502, 709
BseRI GAGGAG 1 cut(s) 197
BseSI GKGCMC 1 cut(s) 52
BseXI GCAGC 1 cut(s) 613
BsgI GTGCAG 2 cut(s) 186, 620
BshFI GGCC 6 cut(s) 50, 225, 286, 564, 663, 751
BshNI GGYRCC 2 cut(s) 449, 681
BsiHKAI GWGCWC 2 cut(s) 158, 511
BsiSI CCGG 2 cut(s) 522, 685
BslFI GGGAC 1 cut(s) 650
BslI CCNNNNNNNGG 4 cut(s) 58, 232, 522, 646
BsmAI GTCTC 1 cut(s) 506
BsmFI GGGAC 1 cut(s) 650
BsmI GAATGC 1 cut(s) 413
BsnI GGCC 6 cut(s) 50, 225, 286, 564, 663, 751
Bso31I GGTCTC 1 cut(s) 506
Bsp120I GGGCCC 1 cut(s) 48
Bsp1286I GDGCHC 3 cut(s) 52, 158, 511
Bsp143I GATC 2 cut(s) 357, 716
Bsp1720I GCTNAGC 1 cut(s) 63
Bsp19I CCATGG 1 cut(s) 112
BspANI GGCC 6 cut(s) 50, 225, 286, 564, 663, 751
BspCNI CTCAG 5 cut(s) 76, 151, 343, 493, 645
BspLI GGNNCC 4 cut(s) 50, 451, 638, 683
BspPI GGATC 1 cut(s) 365
BspT107I GGYRCC 2 cut(s) 449, 681
BspTNI GGTCTC 1 cut(s) 506
BsrDI GCAATG 4 cut(s) 593, 605, 664, 719
BsrI ACTGG 5 cut(s) 11, 177, 251, 502, 709
BssECI CCNNGG 4 cut(s) 112, 298, 453, 522
BssMI GATC 2 cut(s) 357, 716
BssT1I CCWWGG 2 cut(s) 112, 453
Bst2UI CCWGG 3 cut(s) 269, 300, 554
Bst6I CTCTTC 1 cut(s) 545
BstAPI GCANNNNNTGC 1 cut(s) 607
BstC8I GCNNGC 1 cut(s) 69
BstDEI CTNAG 5 cut(s) 63, 159, 351, 480, 653
BstDSI CCRYGG 1 cut(s) 112
BstF5I GGATG 4 cut(s) 83, 259, 277, 379
BstKTI GATC 2 cut(s) 360, 719
BstMAI GTCTC 1 cut(s) 506
BstMBI GATC 2 cut(s) 357, 716
BstMWI GCNNNNNNNGC 3 cut(s) 68, 162, 607
BstNI CCWGG 3 cut(s) 269, 300, 554
BstSCI CCNGG 5 cut(s) 267, 298, 521, 552, 684
BstSLI GKGCMC 1 cut(s) 52
BstV1I GCAGC 1 cut(s) 613
BstV2I GAAGAC 2 cut(s) 250, 438
BsuI GTATCC 1 cut(s) 392
BsuRI GGCC 6 cut(s) 50, 225, 286, 564, 663, 751
BtgI CCRYGG 1 cut(s) 112
BtsCI GGATG 4 cut(s) 83, 259, 277, 379
Cac8I GCNNGC 1 cut(s) 69
Cfr13I GGNCC 5 cut(s) 48, 49, 285, 637, 649
CsiI ACCWGGT 1 cut(s) 552
Csp6I GTAC 1 cut(s) 325
CviAII CATG 4 cut(s) 113, 316, 361, 474
CviQI GTAC 1 cut(s) 325
DdeI CTNAG 5 cut(s) 63, 159, 351, 480, 653
DpnI GATC 2 cut(s) 359, 718
DpnII GATC 2 cut(s) 357, 716
DraI TTTAAA 1 cut(s) 169
EaeI YGGCCR 1 cut(s) 223
Eam1104I CTCTTC 1 cut(s) 545
EarI CTCTTC 1 cut(s) 545
Ecl136II GAGCTC 2 cut(s) 156, 509
Eco130I CCWWGG 2 cut(s) 112, 453
Eco147I AGGCCT 1 cut(s) 564
Eco24I GRGCYC 3 cut(s) 52, 158, 511
Eco31I GGTCTC 1 cut(s) 506
Eco47I GGWCC 2 cut(s) 637, 649
Eco53kI GAGCTC 2 cut(s) 156, 509
Eco57I CTGAAG 1 cut(s) 359
EcoICRI GAGCTC 2 cut(s) 156, 509
EcoO109I RGGNCCY 2 cut(s) 48, 649
EcoRI GAATTC 1 cut(s) 188
EcoRII CCWGG 3 cut(s) 267, 298, 552
EcoT14I CCWWGG 2 cut(s) 112, 453
EcoT38I GRGCYC 3 cut(s) 52, 158, 511
ErhI CCWWGG 2 cut(s) 112, 453
FaeI CATG 4 cut(s) 116, 319, 364, 477
FaiI YATR 5 cut(s) 114, 317, 362, 475, 757
FaqI GGGAC 1 cut(s) 650
FatI CATG 4 cut(s) 112, 315, 360, 473
Fnu4HI GCNGC 1 cut(s) 602
FokI GGATG 4 cut(s) 90, 266, 284, 386
FriOI GRGCYC 3 cut(s) 52, 158, 511
Fsp4HI GCNGC 1 cut(s) 602
FspBI CTAG 1 cut(s) 347
GluI GCNGC 1 cut(s) 602
GsuI CTGGAG 1 cut(s) 155
HaeIII GGCC 6 cut(s) 50, 225, 286, 564, 663, 751
HapII CCGG 2 cut(s) 522, 685
Hin1II CATG 4 cut(s) 116, 319, 364, 477
HindIII AAGCTT 1 cut(s) 29
HinfI GANTC 1 cut(s) 303
HpaII CCGG 2 cut(s) 522, 685
HphI GGTGA 6 cut(s) 50, 118, 163, 253, 469, 505
Hpy166II GTNNAC 2 cut(s) 109, 244
Hpy188I TCNGA 3 cut(s) 124, 160, 506
Hpy188III TCNNGA 4 cut(s) 134, 193, 406, 652
Hpy8I GTNNAC 2 cut(s) 109, 244
HpyAV CCTTC 3 cut(s) 142, 451, 575
HpyCH4IV ACGT 2 cut(s) 56, 240
HpyCH4V TGCA 3 cut(s) 203, 601, 610
HpyF10VI GCNNNNNNNGC 3 cut(s) 68, 162, 607
HpyF3I CTNAG 5 cut(s) 63, 159, 351, 480, 653
HpySE526I ACGT 2 cut(s) 56, 240
Hsp92II CATG 4 cut(s) 116, 319, 364, 477
Kzo9I GATC 2 cut(s) 357, 716
Lsp1109I GCAGC 1 cut(s) 613
LweI GCATC 1 cut(s) 508
MabI ACCWGGT 1 cut(s) 552
MaeI CTAG 1 cut(s) 347
MaeII ACGT 2 cut(s) 56, 240
MaeIII GTNAC 1 cut(s) 493
MalI GATC 2 cut(s) 359, 718
MboI GATC 2 cut(s) 357, 716
MboII GAAGA 8 cut(s) 53, 88, 250, 352, 440, 443, 532, 726
MhlI GDGCHC 3 cut(s) 52, 158, 511
MlsI TGGCCA 1 cut(s) 225
MluCI AATT 3 cut(s) 117, 188, 642
MluNI TGGCCA 1 cut(s) 225
MmeI TCCRAC 1 cut(s) 213
Mox20I TGGCCA 1 cut(s) 225
MscI TGGCCA 1 cut(s) 225
MseI TTAA 2 cut(s) 168, 627
MslI CAYNNNNRTG 3 cut(s) 365, 455, 516
Msp20I TGGCCA 1 cut(s) 225
MspA1I CMGCKG 1 cut(s) 103
MspI CCGG 2 cut(s) 522, 685
MspR9I CCNGG 5 cut(s) 269, 300, 523, 554, 686
Mva1269I GAATGC 1 cut(s) 413
MvaI CCWGG 3 cut(s) 269, 300, 554
MwoI GCNNNNNNNGC 3 cut(s) 68, 162, 607
NciI CCSGG 2 cut(s) 523, 686
NcoI CCATGG 1 cut(s) 112
NdeII GATC 2 cut(s) 357, 716
NlaIII CATG 4 cut(s) 116, 319, 364, 477
NlaIV GGNNCC 4 cut(s) 50, 451, 638, 683
NmuCI GTSAC 1 cut(s) 493
OliI CACNNNNGTG 1 cut(s) 455
PceI AGGCCT 1 cut(s) 564
PctI GAATGC 1 cut(s) 413
PfeI GAWTC 1 cut(s) 303
PflMI CCANNNNNTGG 2 cut(s) 58, 232
PfoI TCCNGGA 1 cut(s) 267
PkrI GCNGC 1 cut(s) 603
PpuMI RGGWCCY 1 cut(s) 649
Psp124BI GAGCTC 2 cut(s) 158, 511
Psp1406I AACGTT 1 cut(s) 56
Psp5II RGGWCCY 1 cut(s) 649
Psp6I CCWGG 3 cut(s) 267, 298, 552
PspGI CCWGG 3 cut(s) 267, 298, 552
PspN4I GGNNCC 4 cut(s) 50, 451, 638, 683
PspOMI GGGCCC 1 cut(s) 48
PspPI GGNCC 5 cut(s) 48, 49, 285, 637, 649
PspPPI RGGWCCY 1 cut(s) 649
PvuII CAGCTG 1 cut(s) 103
RsaI GTAC 1 cut(s) 326
RsaNI GTAC 1 cut(s) 325
RseI CAYNNNNRTG 3 cut(s) 365, 455, 516
SacI GAGCTC 2 cut(s) 158, 511
SaqAI TTAA 2 cut(s) 168, 627
SatI GCNGC 1 cut(s) 602
Sau3AI GATC 2 cut(s) 357, 716
Sau96I GGNCC 5 cut(s) 48, 49, 285, 637, 649
ScrFI CCNGG 5 cut(s) 269, 300, 523, 554, 686
SduI GDGCHC 3 cut(s) 52, 158, 511
SexAI ACCWGGT 1 cut(s) 552
SfaNI GCATC 1 cut(s) 508
SinI GGWCC 2 cut(s) 637, 649
SmiMI CAYNNNNRTG 3 cut(s) 365, 455, 516
SmlI CTYRAG 1 cut(s) 745
SmoI CTYRAG 1 cut(s) 745
Sse9I AATT 3 cut(s) 117, 188, 642
SseBI AGGCCT 1 cut(s) 564
SspMI CTAG 1 cut(s) 347
SstI GAGCTC 2 cut(s) 158, 511
StuI AGGCCT 1 cut(s) 564
StyD4I CCNGG 5 cut(s) 267, 298, 521, 552, 684
StyI CCWWGG 2 cut(s) 112, 453
TaiI ACGT 2 cut(s) 59, 243
TaqI TCGA 1 cut(s) 290
TasI AATT 3 cut(s) 117, 188, 642
TatI WGTACW 1 cut(s) 324
TfiI GAWTC 1 cut(s) 303
Tru1I TTAA 2 cut(s) 168, 627
Tru9I TTAA 2 cut(s) 168, 627
TseFI GTSAC 1 cut(s) 493
TseI GCWGC 1 cut(s) 601
Tsp45I GTSAC 1 cut(s) 493
TspDTI ATGAA 2 cut(s) 294, 716
Van91I CCANNNNNTGG 2 cut(s) 58, 232
VpaK11BI GGWCC 2 cut(s) 637, 649
XapI RAATTY 2 cut(s) 117, 188
XspI CTAG 1 cut(s) 347
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.