Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0000300

Physical Location & Seq

Genomic Coordinates Forward (+)

41000147 .. 41008119

Gene Structure 7973 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0264000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1854 bp

ATGAGCGGAGCCACACTGTGCGCGCTGTTGGGCGATTTGGGGTACGAAGGCGCCGATGCATTGGACCCCGACAGTTTCGAATGGCCTTTTCAATACGACGACGCTCGACCTATTCTCGATTGGGTCTGCTCCAGCCTCCGCCCCTCTAACGTTCTATCCCTCACCGAGCTCTCTCGGTACGAGCAGTTTTTGCAGGAGGGAAAGCTGTTAGAGGGGGAAGATTTGGACTTTGCTTATGATAGCATTTCTGCCTTTTCTTCCAGCCGAGACAACCAGGAGGCGGTTTTCGCAGCTGAAGAGGGACTCAAAGATATTCGGGATGCAACTCTGGCATATAGATCTGAAGCTTTACAGTTGCAGAAGCAGCTTAGACATCTGGATTCTCAATTTGACATGCTTACTGGTCAAGCTTCTGCTTTGATCCAAGGTAGACGGGCTCGAGTTGCTACAACATCTACTATTAACGGACACCTTACTACCATAGATGACACCCTTTCCGCAAAAAATTTGCAGATGAATGCAGTTCTTGGAAGGATTGCGTCTACAGCACAGGAATTGGCTCATTATCACTCTGGGGATGGGGATGGAATCTATTTAGCATATTCAGACTTTCATCCGTACTTGCTTGGAGATTCATCCTGTATAAAGGAGCTCAATCAGTGGTTTGCTAAGCAGTTGGACACGGGCCCCTTTCGTTTAGTTGCTGAAGATGGAAAGTCCAAGTGTTCGTGGGTGAGTCTTGAAGACATCTCAAATATCATTGTGAGAGCAGATTTAGAAAAATCCCAGCATCAACGTGTCTCAGAATTGCAACGACTGCGTTCTATTTTTGGGACAAGTGAAAGACAATGGGTGGAAGCTCAAGTTGAGAATGCTAAGCAACAAGCTATTCTAATGTCACTTAAATCTCAAGTTTCATCAGATGAAGCGCACATTCATCTTGATCTTCATTCCCTTAGGAGGAAACATTCGGAACTTGTCGGAGAACTATCAAATTCTTATAACAAGGAAGAGAAATTGTTATCTGAGACTATTCCGGATCTTTGTTGGGAGCTGGCTCAACTCCAAGACACATACATATTGCAAGGTGATTATGACTTAAAGGTCATGCGACAAGAGTACTATATCAACCGGCAGAAAGCGTTTATAAATCATCTTGTCAATCAACTTGCGAGGCACCAACTGTTAAAGTTAGCTTGCCAGTTGGAAAAGAAACACATGCTTGGAGCATATTCGTTGCTGAAAGTTATTGAATCAGAGGTGCAAGCCTACCTGTCAGCAACTGAAGGCCGTGTGGGTCGTTGCCTAGCCCTAATCCAAGCTGCATCTGATGTACAAGAACAAGGAGGAGTGGATGATCAAGATCACTTTTTGCATGGCGTTAGAGATCTTTTGAGTATCCATTCAAATGCTCAAGCTGGGTTGTCAACATATGTATCAGCTCCGGGTATTGTGCAGCAAATATCTAGTCTTCATTCAGATTTGATGACCCTTGAGTCAGATCTTGAGACCTCTCTTCCAGAGGACAGAAGCAGATGTGTCAACGAGCTGTGCACTCTAATTCAGAGTTTGCAGAAATTGCTGTTTGCATCTTCAACAACTGCGCAACCAATACTGACATCTCGGCCATTGATGAAAGAGCTTGATGAAATGGAGAAAATAAATGCAAAACTCTCAGCTGCAGTTGAAGAGGTGACACTAGAGCATCGTAAGAAAAATGAGATAGTTAAACACCACTCCCAAGAAGTTGGGCTTCAACGGGGTGTGTTTGTTGATTTCTTCTGCAATCCTGAGCGTTTGAGGAGTCAAGTTCGGGAGCTAACTGCACGAGTCAGAGCTTTGCAGGTTTCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0008150 GO:0008152 GO:0009058 GO:0009692 GO:0009693 GO:0009815 GO:0009987 GO:0010817 GO:0016491 GO:0016638 GO:0016641 GO:0042445 GO:0042446 GO:0043449 GO:0043450 GO:0044237 GO:0044249 GO:0055114 GO:0065007 GO:0065008 GO:0071704 GO:1900673 GO:1900674 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00270 ko01100 ko01110 map00270 map01100 map01110

Pfam Domains

Protein Families

2OG-FeII_Oxy DIOX_N

Protein Analysis

617

Amino Acids

69.34

Weight (kDa)

5.24

Isoelectric Point (pI)

44.2

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HAUS-augmin3	PF14932	28 - 290	2.1e-82	HAUS augmin-like complex subunit 3

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000300)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G02190 AT1G02190 AT1G02205 AT1G02205 AT1G02205 AT1G02205 AT1G02205 AT2G37700 AT2G37700 AT2G37700 AT2G37700
fragaria_vesca	FvH4_1g22160 FvH4_7g08560 FvH4_7g08560 FvH4_7g08560 FvH4_7g08570 FvH4_7g08570 FvH4_7g08590 FvH4_7g08590
malus_domestica	MD02G1226900.v1.1 MD07G1083700.v1.1 MD07G1083800.v1.1 MD07G1086200.v1.1 MD07G1086300.v1.1 MD07G1086700.v1.1 MD13G1075600.v1.1
prunus_persica	Prupe.2G112600_v2.0.a1 Prupe.2G112800_v2.0.a1 Prupe.2G113000_v2.0.a1 Prupe.2G113500_v2.0.a1 Prupe.2G113600_v2.0.a1
pyrus_communis	pycom02g19600 pycom02g19610 pycom07g06920 pycom07g06930
rosa_chinensis	RchiOBHm_Chr1g0343261 RchiOBHm_Chr1g0343301 RchiOBHm_Chr1g0343371 RchiOBHm_Chr1g0343431 RchiOBHm_Chr1g0343441 RchiOBHm_Chr1g0343521 RchiOBHm_Chr1g0343691 RchiOBHm_Chr1g0343791
rosa_laevigata	RLG00000028951 RLG00000028953 RLG00000028965 RLG00000028968 RLG00000028969 RLG00000028971 RLG00000028972 RLG00000028974 RLG00000029891
rosa_multiflora	Rmu_sc0000021.1_g000002 Rmu_sc0000335.1_g000046 Rmu_sc0000335.1_g000047 Rmu_sc0000335.1_g000058 Rmu_sc0000335.1_g000061 Rmu_sc0000335.1_g000106 Rmu_sc0000335.1_g000125 Rmu_sc0000544.1_g000010 Rmu_sc0003430.1_g000012 Rmu_sc0005796.1_g000004 Rmu_sc0028268.1_g000001 Rmu_ssc0000259.1_g000038
rosa_roxburghii	Rroxscaffold_2G00110090 Rroxscaffold_4G00310350 Rroxscaffold_4G00310610 Rroxscaffold_4G00310710 Rroxscaffold_4G00310740 Rroxscaffold_4G00310760 Rroxscaffold_4G00321110
rosa_rugosa	Rorug01G0080100 Rorug01G0080200 Rorug01G0166400 Rorug01G0166500 Rorug01G0166500 Rorug01G0166600 Rorug01G0166700 Rorug01G0166800 Rorug01G0168400 Rorug01G0168500 Rorug01G0168800 Rorug03G0241300 Rorug03G0241400 Rorug04G0001200 Rorug06G0031500 Rorug06G0073200 Rorug06G0264000
rosa_samantha	Rh1AG098100 Rh1AG181800 Rh1AG182100 Rh1AG182400 Rh1AG183000 Rh1AG183600 Rh1AG184300 Rh1AG185400 Rh1BG104000 Rh1BG150000 Rh1BG150400 Rh1BG152100 Rh1BG152300 Rh1CG168600 Rh1CG168900 Rh1CG169000 Rh1CG169700 Rh1CG170500 Rh1CG171200 Rh1DG182000 Rh1DG182300 Rh1DG184000 Rh1DG184200
rosa_wichuraiana	Rw0G012940 Rw1G007640 Rw1G007670 Rw1G011320 Rw1G015090 Rw1G015110 Rw1G015130 Rw1G015150 Rw1G015290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1002, 1148
AasI	GACNNNNNNGTC	2 cut(s)	1103, 1495
Acc16I	TGCGCA	1 cut(s)	1605
Acc36I	ACCTGC	1 cut(s)	1834
AccB1I	GGYRCC	2 cut(s)	50, 1176
AccBSI	CCGCTC	1 cut(s)	6
AccI	GTMKAC	2 cut(s)	430, 542
AccII	CGCG	1 cut(s)	23
AccIII	TCCGGA	1 cut(s)	1036
AciI	CCGC	4 cut(s)	6, 139, 281, 498
AclI	AACGTT	1 cut(s)	150
AclWI	GGATC	2 cut(s)	415, 1047
AcoI	YGGCCR	1 cut(s)	1625
AcsI	RAATTY	2 cut(s)	505, 994
AcuI	CTGAAG	4 cut(s)	315, 363, 726, 1305
AcyI	GRCGYC	1 cut(s)	51
AdeI	CACNNNGTG	1 cut(s)	18
AfaI	GTAC	5 cut(s)	44, 179, 620, 1121, 1335
AfiI	CCNNNNNNNGG	2 cut(s)	280, 960
AflIII	ACRYGT	1 cut(s)	796
AgsI	TTSAA	7 cut(s)	92, 743, 1253, 1407, 1596, 1688, 1757
AjnI	CCWGG	1 cut(s)	273
Alw21I	GWGCWC	3 cut(s)	171, 654, 1556
Alw26I	GTCTC	4 cut(s)	261, 805, 1022, 1502
Alw44I	GTGCAC	1 cut(s)	1552
AlwI	GGATC	2 cut(s)	415, 1047
AlwNI	CAGNNNCTG	1 cut(s)	1283
Ama87I	CYCGRG	1 cut(s)	438
Aor13HI	TCCGGA	1 cut(s)	1036
AoxI	GGCC	4 cut(s)	83, 685, 1288, 1625
ApaI	GGGCCC	1 cut(s)	689
ApaLI	GTGCAC	1 cut(s)	1552
ApeKI	GCWGC	5 cut(s)	290, 364, 1322, 1456, 1679
ApoI	RAATTY	2 cut(s)	505, 994
ArsI	GACNNNNNNTTYG	2 cut(s)	1453, 1485
AspLEI	GCGC	5 cut(s)	23, 25, 53, 931, 1606
AspS9I	GGNCC	3 cut(s)	64, 685, 686
AsuC2I	CCSGG	1 cut(s)	1446
AsuHPI	GGTGA	4 cut(s)	154, 745, 1100, 1705
AsuII	TTCGAA	1 cut(s)	78
AvaI	CYCGRG	1 cut(s)	438
AvaII	GGWCC	1 cut(s)	64
AxyI	CCTNAGG	1 cut(s)	956
BaeGI	GKGCMC	2 cut(s)	689, 1556
BaeI	ACNNNNGTAYC	2 cut(s)	1419, 1452
BanI	GGYRCC	2 cut(s)	50, 1176
BanII	GRGCYC	4 cut(s)	171, 439, 654, 689
BauI	CACGAG	1 cut(s)	1827
BbsI	GAAGAC	2 cut(s)	750, 1463
Bbv12I	GWGCWC	3 cut(s)	171, 654, 1556
BbvI	GCAGC	5 cut(s)	302, 376, 1309, 1468, 1666
BccI	CCATC	3 cut(s)	572, 578, 704
BceAI	ACGGC	1 cut(s)	1275
BciT130I	CCWGG	1 cut(s)	275
BciVI	GTATCC	1 cut(s)	1409
BclI	TGATCA	1 cut(s)	1357
BcnI	CCSGG	1 cut(s)	1446
BcoDI	GTCTC	4 cut(s)	261, 805, 1022, 1502
BfaI	CTAG	3 cut(s)	1307, 1467, 1700
BfmI	CTRYAG	2 cut(s)	543, 1680
BfoI	RGCGCY	1 cut(s)	54
BfuAI	ACCTGC	1 cut(s)	1834
BfuI	GTATCC	1 cut(s)	1409
BglII	AGATCT	3 cut(s)	338, 1387, 1501
BisI	GCNGC	5 cut(s)	291, 365, 1323, 1457, 1680
BlpI	GCTNAGC	2 cut(s)	669, 876
BlsI	GCNGC	5 cut(s)	292, 366, 1324, 1458, 1681
BmcAI	AGTACT	1 cut(s)	1121
Bme1390I	CCNGG	2 cut(s)	275, 1446
Bme18I	GGWCC	1 cut(s)	64
BmeT110I	CYCGRG	1 cut(s)	438
BmgT120I	GGNCC	3 cut(s)	64, 685, 686
BmiI	GGNNCC	6 cut(s)	10, 52, 66, 687, 688, 1178
BmrFI	CCNGG	2 cut(s)	275, 1446
BmsI	GCATC	6 cut(s)	46, 310, 799, 1334, 1598, 1714
BpiI	GAAGAC	2 cut(s)	750, 1463
BpmI	CTGGAG	1 cut(s)	115
Bpu10I	CCTNAGC	1 cut(s)	1791
Bpu1102I	GCTNAGC	2 cut(s)	669, 876
Bpu14I	TTCGAA	1 cut(s)	78
BpuEI	CTTGAG	5 cut(s)	846, 894, 1398, 1514, 1526
BpuMI	CCSGG	1 cut(s)	1446
BsaBI	GATNNNNATC	1 cut(s)	1362
BsaHI	GRCGYC	1 cut(s)	51
BsaI	GGTCTC	1 cut(s)	1502
BsaJI	CCNNGG	1 cut(s)	424
BsaWI	WCCGGW	1 cut(s)	1036
Bsc4I	CCNNNNNNNGG	2 cut(s)	280, 960
Bse118I	RCCGGY	1 cut(s)	1131
Bse1I	ACTGG	2 cut(s)	406, 1201
Bse21I	CCTNAGG	1 cut(s)	956
Bse8I	GATNNNNATC	1 cut(s)	1362
BseAI	TCCGGA	1 cut(s)	1036
BseBI	CCWGG	1 cut(s)	275
BseDI	CCNNGG	1 cut(s)	424
BseGI	GGATG	6 cut(s)	325, 583, 589, 613, 635, 1360
BseJI	GATNNNNATC	1 cut(s)	1362
BseLI	CCNNNNNNNGG	2 cut(s)	280, 960
BseMII	CTCAG	4 cut(s)	816, 1017, 1689, 1782
BseNI	ACTGG	2 cut(s)	406, 1201
BsePI	GCGCGC	1 cut(s)	21
BseRI	GAGGAG	2 cut(s)	1362, 1816
BseSI	GKGCMC	2 cut(s)	689, 1556
BseXI	GCAGC	5 cut(s)	302, 376, 1309, 1468, 1666
BseYI	CCCAGC	2 cut(s)	786, 1418
BsgI	GTGCAG	2 cut(s)	1475, 1809
Bsh1236I	CGCG	1 cut(s)	23
BshFI	GGCC	4 cut(s)	85, 687, 1290, 1627
BshNI	GGYRCC	2 cut(s)	50, 1176
BsiHKAI	GWGCWC	3 cut(s)	171, 654, 1556
BsiHKCI	CYCGRG	1 cut(s)	438
BsiSI	CCGG	3 cut(s)	1037, 1132, 1445
BslFI	GGGAC	2 cut(s)	315, 847
BslI	CCNNNNNNNGG	2 cut(s)	280, 960
BsmAI	GTCTC	4 cut(s)	261, 805, 1022, 1502
BsmFI	GGGAC	2 cut(s)	315, 847
BsmI	GAATGC	2 cut(s)	523, 877
BsnI	GGCC	4 cut(s)	85, 687, 1290, 1627
Bso31I	GGTCTC	1 cut(s)	1502
BsoBI	CYCGRG	1 cut(s)	438
Bsp119I	TTCGAA	1 cut(s)	78
Bsp120I	GGGCCC	1 cut(s)	685
Bsp1286I	GDGCHC	5 cut(s)	171, 439, 654, 689, 1556
Bsp13I	TCCGGA	1 cut(s)	1036
Bsp1407I	TGTACA	1 cut(s)	1333
Bsp143I	GATC	8 cut(s)	338, 420, 943, 1039, 1357, 1363, 1387, 1501
Bsp1720I	GCTNAGC	2 cut(s)	669, 876
BspACI	CCGC	4 cut(s)	6, 139, 281, 498
BspANI	GGCC	4 cut(s)	85, 687, 1290, 1627
BspCNI	CTCAG	4 cut(s)	815, 1018, 1688, 1783
BspEI	TCCGGA	1 cut(s)	1036
BspFNI	CGCG	1 cut(s)	23
BspLI	GGNNCC	6 cut(s)	10, 52, 66, 687, 688, 1178
BspMAI	CTGCAG	1 cut(s)	1684
BspMI	ACCTGC	1 cut(s)	1834
BspPI	GGATC	2 cut(s)	415, 1047
BspT104I	TTCGAA	1 cut(s)	78
BspT107I	GGYRCC	2 cut(s)	50, 1176
BspTNI	GGTCTC	1 cut(s)	1502
BsrBI	CCGCTC	1 cut(s)	6
BsrFI	RCCGGY	1 cut(s)	1131
BsrGI	TGTACA	1 cut(s)	1333
BsrI	ACTGG	2 cut(s)	406, 1201
BssAI	RCCGGY	1 cut(s)	1131
BssECI	CCNNGG	1 cut(s)	424
BssHII	GCGCGC	1 cut(s)	21
BssMI	GATC	8 cut(s)	338, 420, 943, 1039, 1357, 1363, 1387, 1501
BssNI	GRCGYC	1 cut(s)	51
BssSI	CACGAG	1 cut(s)	1827
BssT1I	CCWWGG	1 cut(s)	424
Bst2BI	CACGAG	1 cut(s)	1827
Bst2UI	CCWGG	1 cut(s)	275
Bst4CI	ACNGT	4 cut(s)	18, 74, 354, 1185
Bst6I	CTCTTC	4 cut(s)	291, 1005, 1521, 1683
BstACI	GRCGYC	1 cut(s)	51
BstAPI	GCANNNNNTGC	3 cut(s)	190, 817, 1579
BstAUI	TGTACA	1 cut(s)	1333
BstBI	TTCGAA	1 cut(s)	78
BstC8I	GCNNGC	4 cut(s)	23, 1056, 1198, 1266
BstDEI	CTNAG	8 cut(s)	368, 669, 802, 876, 956, 1026, 1675, 1791
BstF5I	GGATG	6 cut(s)	325, 583, 589, 613, 635, 1360
BstFNI	CGCG	1 cut(s)	23
BstH2I	RGCGCY	1 cut(s)	54
BstHHI	GCGC	5 cut(s)	23, 25, 53, 931, 1606
BstKTI	GATC	8 cut(s)	341, 423, 946, 1042, 1360, 1366, 1390, 1504
BstMAI	GTCTC	4 cut(s)	261, 805, 1022, 1502
BstMBI	GATC	8 cut(s)	338, 420, 943, 1039, 1357, 1363, 1387, 1501
BstMWI	GCNNNNNNNGC	8 cut(s)	190, 287, 329, 364, 443, 545, 817, 1579
BstNI	CCWGG	1 cut(s)	275
BstNSI	RCATGY	2 cut(s)	397, 1222
BstSCI	CCNGG	2 cut(s)	273, 1444
BstSFI	CTRYAG	2 cut(s)	543, 1680
BstSLI	GKGCMC	2 cut(s)	689, 1556
BstUI	CGCG	1 cut(s)	23
BstV1I	GCAGC	5 cut(s)	302, 376, 1309, 1468, 1666
BstV2I	GAAGAC	2 cut(s)	750, 1463
BstX2I	RGATCY	4 cut(s)	338, 1039, 1387, 1501
BstXI	CCANNNNNNTGG	1 cut(s)	1748
BstYI	RGATCY	4 cut(s)	338, 1039, 1387, 1501
Bsu36I	CCTNAGG	1 cut(s)	956
BsuI	GTATCC	1 cut(s)	1409
BsuRI	GGCC	4 cut(s)	85, 687, 1290, 1627
BtsCI	GGATG	6 cut(s)	325, 583, 589, 613, 635, 1360
BtsIMutI	CAGTG	2 cut(s)	14, 665
BveI	ACCTGC	1 cut(s)	1834
Cac8I	GCNNGC	4 cut(s)	23, 1056, 1198, 1266
CaiI	CAGNNNCTG	1 cut(s)	1283
CfoI	GCGC	5 cut(s)	23, 25, 53, 931, 1606
Cfr10I	RCCGGY	1 cut(s)	1131
Cfr13I	GGNCC	3 cut(s)	64, 685, 686
CseI	GACGC	2 cut(s)	110, 528
Csp6I	GTAC	5 cut(s)	43, 178, 619, 1120, 1334
CviAII	CATG	4 cut(s)	394, 1108, 1219, 1376
CviQI	GTAC	5 cut(s)	43, 178, 619, 1120, 1334
DdeI	CTNAG	8 cut(s)	368, 669, 802, 876, 956, 1026, 1675, 1791
DinI	GGCGCC	1 cut(s)	52
DpnI	GATC	8 cut(s)	340, 422, 945, 1041, 1359, 1365, 1389, 1503
DpnII	GATC	8 cut(s)	338, 420, 943, 1039, 1357, 1363, 1387, 1501
DraIII	CACNNNGTG	1 cut(s)	18
DrdI	GACNNNNNNGTC	2 cut(s)	1103, 1495
DseDI	GACNNNNNNGTC	2 cut(s)	1103, 1495
EaeI	YGGCCR	1 cut(s)	1625
Eam1104I	CTCTTC	4 cut(s)	291, 1005, 1521, 1683
EarI	CTCTTC	4 cut(s)	291, 1005, 1521, 1683
EciI	GGCGGA	1 cut(s)	128
Ecl136II	GAGCTC	2 cut(s)	169, 652
Eco130I	CCWWGG	1 cut(s)	424
Eco24I	GRGCYC	4 cut(s)	171, 439, 654, 689
Eco31I	GGTCTC	1 cut(s)	1502
Eco47I	GGWCC	1 cut(s)	64
Eco53kI	GAGCTC	2 cut(s)	169, 652
Eco57I	CTGAAG	4 cut(s)	315, 363, 726, 1305
Eco81I	CCTNAGG	1 cut(s)	956
Eco88I	CYCGRG	1 cut(s)	438
EcoICRI	GAGCTC	2 cut(s)	169, 652
EcoO109I	RGGNCCY	1 cut(s)	686
EcoRII	CCWGG	1 cut(s)	273
EcoT14I	CCWWGG	1 cut(s)	424
EcoT22I	ATGCAT	1 cut(s)	61
EcoT38I	GRGCYC	4 cut(s)	171, 439, 654, 689
EgeI	GGCGCC	1 cut(s)	52
EheI	GGCGCC	1 cut(s)	52
ErhI	CCWWGG	1 cut(s)	424
FaeI	CATG	4 cut(s)	397, 1111, 1222, 1379
FalI	AAGNNNNNCTT	2 cut(s)	1737, 1769
FaqI	GGGAC	2 cut(s)	315, 847
FatI	CATG	4 cut(s)	393, 1107, 1218, 1375
FauNDI	CATATG	1 cut(s)	1432
FbaI	TGATCA	1 cut(s)	1357
FblI	GTMKAC	2 cut(s)	430, 542
Fnu4HI	GCNGC	5 cut(s)	291, 365, 1323, 1457, 1680
FokI	GGATG	6 cut(s)	332, 590, 596, 600, 622, 1367
FriOI	GRGCYC	4 cut(s)	171, 439, 654, 689
Fsp4HI	GCNGC	5 cut(s)	291, 365, 1323, 1457, 1680
FspBI	CTAG	3 cut(s)	1307, 1467, 1700
FspI	TGCGCA	1 cut(s)	1605
GlaI	GCGC	5 cut(s)	22, 24, 52, 930, 1605
GluI	GCNGC	5 cut(s)	291, 365, 1323, 1457, 1680
GsaI	CCCAGC	2 cut(s)	790, 1422
GsuI	CTGGAG	1 cut(s)	115
HaeII	RGCGCY	1 cut(s)	54
HaeIII	GGCC	4 cut(s)	85, 687, 1290, 1627
HapII	CCGG	3 cut(s)	1037, 1132, 1445
HgaI	GACGC	2 cut(s)	110, 528
HhaI	GCGC	5 cut(s)	23, 25, 53, 931, 1606
Hin1I	GRCGYC	1 cut(s)	51
Hin1II	CATG	4 cut(s)	397, 1111, 1222, 1379
Hin6I	GCGC	5 cut(s)	21, 23, 51, 929, 1604
HinP1I	GCGC	5 cut(s)	21, 23, 51, 929, 1604
HincII	GTYRAC	2 cut(s)	1428, 1543
HindII	GTYRAC	2 cut(s)	1428, 1543
HindIII	AAGCTT	2 cut(s)	345, 408
HinfI	GANTC	9 cut(s)	303, 380, 588, 632, 736, 1253, 1496, 1804, 1830
HpaII	CCGG	3 cut(s)	1037, 1132, 1445
HphI	GGTGA	4 cut(s)	154, 745, 1100, 1705
Hpy166II	GTNNAC	5 cut(s)	431, 543, 1428, 1543, 1554
Hpy8I	GTNNAC	5 cut(s)	431, 543, 1428, 1543, 1554
Hpy99I	CGWCG	2 cut(s)	101, 104
HpyAV	CCTTC	3 cut(s)	41, 525, 1280
HpyCH4III	ACNGT	4 cut(s)	18, 74, 354, 1185
HpyCH4IV	ACGT	2 cut(s)	150, 796
HpyF10VI	GCNNNNNNNGC	8 cut(s)	190, 287, 329, 364, 443, 545, 817, 1579
HpyF3I	CTNAG	8 cut(s)	368, 669, 802, 876, 956, 1026, 1675, 1791
HpySE526I	ACGT	2 cut(s)	150, 796
Hsp92I	GRCGYC	1 cut(s)	51
Hsp92II	CATG	4 cut(s)	397, 1111, 1222, 1379
HspAI	GCGC	5 cut(s)	21, 23, 51, 929, 1604
KasI	GGCGCC	1 cut(s)	50
Kpn2I	TCCGGA	1 cut(s)	1036
Ksp22I	TGATCA	1 cut(s)	1357
Kzo9I	GATC	8 cut(s)	338, 420, 943, 1039, 1357, 1363, 1387, 1501
LmnI	GCTCC	7 cut(s)	8, 134, 649, 1051, 1226, 1447, 1816
Lsp1109I	GCAGC	5 cut(s)	302, 376, 1309, 1468, 1666
LweI	GCATC	6 cut(s)	46, 310, 799, 1334, 1598, 1714
MaeI	CTAG	3 cut(s)	1307, 1467, 1700
MaeII	ACGT	2 cut(s)	150, 796
MaeIII	GTNAC	2 cut(s)	897, 1693
MalI	GATC	8 cut(s)	340, 422, 945, 1041, 1359, 1365, 1389, 1503
MbiI	CCGCTC	1 cut(s)	6
MboI	GATC	8 cut(s)	338, 420, 943, 1039, 1357, 1363, 1387, 1501
MflI	RGATCY	4 cut(s)	338, 1039, 1387, 1501
MhlI	GDGCHC	5 cut(s)	171, 439, 654, 689, 1556
MluCI	AATT	8 cut(s)	386, 505, 554, 806, 994, 1016, 1560, 1577
Mly113I	GGCGCC	1 cut(s)	51
MlyI	GAGTC	5 cut(s)	297, 745, 1505, 1813, 1839
MmeI	TCCRAC	3 cut(s)	657, 961, 1185
Mph1103I	ATGCAT	1 cut(s)	61
MroI	TCCGGA	1 cut(s)	1036
MseI	TTAA	5 cut(s)	462, 903, 1100, 1187, 1728
MslI	CAYNNNNRTG	2 cut(s)	795, 1407
MspA1I	CMGCKG	2 cut(s)	293, 1679
MspI	CCGG	3 cut(s)	1037, 1132, 1445
MspR9I	CCNGG	2 cut(s)	275, 1446
Mva1269I	GAATGC	2 cut(s)	523, 877
MvaI	CCWGG	1 cut(s)	275
MvnI	CGCG	1 cut(s)	23
MwoI	GCNNNNNNNGC	8 cut(s)	190, 287, 329, 364, 443, 545, 817, 1579
NarI	GGCGCC	1 cut(s)	51
NciI	CCSGG	1 cut(s)	1446
NdeI	CATATG	1 cut(s)	1432
NdeII	GATC	8 cut(s)	338, 420, 943, 1039, 1357, 1363, 1387, 1501
NlaIII	CATG	4 cut(s)	397, 1111, 1222, 1379
NlaIV	GGNNCC	6 cut(s)	10, 52, 66, 687, 688, 1178
NmeAIII	GCCGAG	2 cut(s)	290, 1603
NmuCI	GTSAC	2 cut(s)	897, 1693
NsbI	TGCGCA	1 cut(s)	1605
NsiI	ATGCAT	1 cut(s)	61
NspI	RCATGY	2 cut(s)	397, 1222
NspV	TTCGAA	1 cut(s)	78
PaeR7I	CTCGAG	1 cut(s)	438
PauI	GCGCGC	1 cut(s)	21
PcsI	WCGNNNNNNNCGW	1 cut(s)	51
PctI	GAATGC	2 cut(s)	523, 877
PfeI	GAWTC	4 cut(s)	380, 588, 632, 1253
PkrI	GCNGC	5 cut(s)	292, 366, 1324, 1458, 1681
PleI	GAGTC	5 cut(s)	297, 744, 1504, 1812, 1838
PluTI	GGCGCC	1 cut(s)	54
PpsI	GAGTC	5 cut(s)	297, 744, 1504, 1812, 1838
PsiI	TTATAA	2 cut(s)	1002, 1148
Psp124BI	GAGCTC	2 cut(s)	171, 654
Psp1406I	AACGTT	1 cut(s)	150
Psp6I	CCWGG	1 cut(s)	273
PspFI	CCCAGC	2 cut(s)	786, 1418
PspGI	CCWGG	1 cut(s)	273
PspN4I	GGNNCC	6 cut(s)	10, 52, 66, 687, 688, 1178
PspOMI	GGGCCC	1 cut(s)	685
PspPI	GGNCC	3 cut(s)	64, 685, 686
PspXI	VCTCGAGB	1 cut(s)	438
PstI	CTGCAG	1 cut(s)	1684
PstNI	CAGNNNCTG	1 cut(s)	1283
PsuI	RGATCY	4 cut(s)	338, 1039, 1387, 1501
PteI	GCGCGC	1 cut(s)	21
PvuII	CAGCTG	2 cut(s)	293, 1679
RsaI	GTAC	5 cut(s)	44, 179, 620, 1121, 1335
RsaNI	GTAC	5 cut(s)	43, 178, 619, 1120, 1334
RseI	CAYNNNNRTG	2 cut(s)	795, 1407
SacI	GAGCTC	2 cut(s)	171, 654
SaqAI	TTAA	5 cut(s)	462, 903, 1100, 1187, 1728
SatI	GCNGC	5 cut(s)	291, 365, 1323, 1457, 1680
Sau3AI	GATC	8 cut(s)	338, 420, 943, 1039, 1357, 1363, 1387, 1501
Sau96I	GGNCC	3 cut(s)	64, 685, 686
ScaI	AGTACT	1 cut(s)	1121
SchI	GAGTC	5 cut(s)	297, 745, 1505, 1813, 1839
ScrFI	CCNGG	2 cut(s)	275, 1446
SduI	GDGCHC	5 cut(s)	171, 439, 654, 689, 1556
SfaNI	GCATC	6 cut(s)	46, 310, 799, 1334, 1598, 1714
SfcI	CTRYAG	2 cut(s)	543, 1680
SfoI	GGCGCC	1 cut(s)	52
Sfr274I	CTCGAG	1 cut(s)	438
SfuI	TTCGAA	1 cut(s)	78
SinI	GGWCC	1 cut(s)	64
SlaI	CTCGAG	1 cut(s)	438
SmiMI	CAYNNNNRTG	2 cut(s)	795, 1407
SmlI	CTYRAG	6 cut(s)	438, 861, 909, 1413, 1493, 1505
SmoI	CTYRAG	6 cut(s)	438, 861, 909, 1413, 1493, 1505
Sse9I	AATT	8 cut(s)	386, 505, 554, 806, 994, 1016, 1560, 1577
SsiI	CCGC	4 cut(s)	6, 139, 281, 498
SspDI	GGCGCC	1 cut(s)	50
SspMI	CTAG	3 cut(s)	1307, 1467, 1700
SstI	GAGCTC	2 cut(s)	171, 654
StyD4I	CCNGG	2 cut(s)	273, 1444
StyI	CCWWGG	1 cut(s)	424
TaaI	ACNGT	4 cut(s)	18, 74, 354, 1185
TaiI	ACGT	2 cut(s)	153, 799
TaqI	TCGA	4 cut(s)	78, 106, 117, 439
TasI	AATT	8 cut(s)	386, 505, 554, 806, 994, 1016, 1560, 1577
TatI	WGTACW	2 cut(s)	1119, 1333
TfiI	GAWTC	4 cut(s)	380, 588, 632, 1253
Tru1I	TTAA	5 cut(s)	462, 903, 1100, 1187, 1728
Tru9I	TTAA	5 cut(s)	462, 903, 1100, 1187, 1728
TscAI	CASTG	2 cut(s)	21, 665
TseFI	GTSAC	2 cut(s)	897, 1693
TseI	GCWGC	5 cut(s)	290, 364, 1322, 1456, 1679
Tsp45I	GTSAC	2 cut(s)	897, 1693
TspGWI	ACGGA	2 cut(s)	480, 606
TspRI	CASTG	2 cut(s)	21, 665
VneI	GTGCAC	1 cut(s)	1552
VpaK11BI	GGWCC	1 cut(s)	64
XapI	RAATTY	2 cut(s)	505, 994
XceI	RCATGY	2 cut(s)	397, 1222
XhoI	CTCGAG	1 cut(s)	438
XmiI	GTMKAC	2 cut(s)	430, 542
XspI	CTAG	3 cut(s)	1307, 1467, 1700
ZrmI	AGTACT	1 cut(s)	1121
Zsp2I	ATGCAT	1 cut(s)	61

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.