Rorug06G0073200

Cytosolic domain of 10TM putative phosphate transporter

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0000300
Physical Location & Seq
Reverse (-)
9731653 .. 9738182
6530 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0073200.1

Sequence Viewer

Length: 1860 bp
ATGGATTCGGAATCTTCGGTTCCATCAACTTCACCTTCAGTTAAAGCTCCTGAGGAGCAACCTCCTGCTGCCTCAGACTCAGGATCAGATAATAGTTCTCGGGAGGCGCCATCCAAGCTAAGTGCATCTGGCCTAACATCATGGGCCAAAAATCTGAAAATTCCTCAGCCAATGGCAGCAGCACAAGACAGCTCTCCGACTGGTTCTGGACAGTCAGGTTTTGCACGCTTTACAAGTGGATTAGGATTGCGCTTGTCTCCAAAAGCTCCGGCAGAAGATGATGATCCCAGTGGAAGCTCAAAAGCTGTGCAACCTGGTATATTTGATACAATTACAAAGGGGATAGTCGACTCTTCTAAGAGTGCAGTGAAAGCTGTTCAGGTTAAGGCCCGGCATGTTGTCTCTCAAAACAAACGCAGATATCAGGAGGGAGGATTTGATTTGGATATGACGTATATCACCGAGAACATTATTGCTATGGGATTCCCAGCTGGTGATATGAGCTCTGGGTTTTTTGGATATGTCGAGGGGTTCTACAGAAACCACATGGAAGAAGTGATTAAGTTTTTTGAAACTCATCATAAGGGCAAGTACAAAGTATACAACCTGTGTTCAGAAAGGCTATATGATGCATCATTATTTGAAGGAAAGGTGGCTAGTTTCCCGTTTGATGACCATAATTGCCCACCAATTCATCTTATATCATTATTTTGTCGAAGTGCTTATTCGTGGCTGAAAGAGGACATTGAGAATGTAGTAGTTGTGCACTGTAAGGCTGGAATGGCAAGGACAGGATTGATGATATCCAGTCTTCTCCTCTACTTAAAGTTCTTTCCTACTGCAGAGGAGTCTATTGACTACTACAACCAGAAGAGATGTTTTGATGGAAAGGGGCTTGTTCTGCCAAGTCAGATTAGGTACGTCAAATATTTCGAACGTATCTTAACATACTTCAACGGTGAAAACCCTCCTGGTCGCAGGTGCATGCTTAGGGGTTTTCGGCTTCACAGGTGCCCATACTGGGTCAGGCCCACCATTACTGTCTCTGATCATAATGGCGTTCTATTCTCCACAAAAGATCATCCAAGAACCAAGGGTCTTTCGCCTGAAGATTTTTGGTTTAGTGCTCCCAAGAAGGGGGTAATGGTCTTTGCTCTGCCAGGGGAACTTGGTTTGACTGAGTTAGTTGGTGACTTCAAAATCCACTTTCATGATCGTCAAGGAGATTTTTACTGCTGGTTGAACACAACGATGACAGAAAATAGAAAAACTTTAACCACCAATGATCTGGATGGATTTGACAAGAGGAAACTGCCTTCCCCGGGATTTCAGGTTGAGGTGGTGTTAGTTGATTATAATGGCAATGTTCCTGCAACACCTACACCTACACCTAGCACTGAAACTACTACAAAGAAACCGGATGAAAGCTCAGGTACCAAACCTCCATCAGATGACGCTGCTGCAGCTGCAGCTGATCCACCATCCCATAATGCAAACCCAGGAGGCCAAGATAAGGATGATGTGTTTTCAGACAGTGAGGCGGAGGAGACTGGCTCTTCAAAAAGTCAGCGAGCAGAAGCAAATTCTCAAGCTGGTGGAACTGTTGCCAGTACCACCTCCAGTTCCGCATCTACTACAAAATCAGATCAAGTTGCAAGTTTAACGCAAGCAACTAAACAAGTTTCTATTGGAAGCACGGACTCTAAACAGGTCCCTGCTGCTAGTGAGCCTAAAAGTGCTGCAGCTGTTGGAAATGTCACGGGCCTTGGGACTCAAAATTCAGAAAGTGAATTTAAGGCAATGGCCGCCGATACCTCTGTCTTCACATTTGGAGATGAAGAAGACTATGAAAGTGAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PHM7_cyt RSN1_7TM RSN1_TM

Protein Analysis

619

Amino Acids

67.18

Weight (kDa)

5.52

Isoelectric Point (pI)

48.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Tc-R-P PF22785 219 - 273 1.6e-06 Polymorphic toxin system, DSP-PTPase phosphatase
PTEN2_C2 PF22918 325 - 453 2.7e-72 PTEN2, C2 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000300)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G02190 AT1G02190 AT1G02205 AT1G02205 AT1G02205 AT1G02205 AT1G02205 AT2G37700 AT2G37700 AT2G37700 AT2G37700
fragaria_vesca FvH4_1g22160 FvH4_7g08560 FvH4_7g08560 FvH4_7g08560 FvH4_7g08570 FvH4_7g08570 FvH4_7g08590 FvH4_7g08590
malus_domestica MD02G1226900.v1.1 MD07G1083700.v1.1 MD07G1083800.v1.1 MD07G1086200.v1.1 MD07G1086300.v1.1 MD07G1086700.v1.1 MD13G1075600.v1.1
prunus_persica Prupe.2G112600_v2.0.a1 Prupe.2G112800_v2.0.a1 Prupe.2G113000_v2.0.a1 Prupe.2G113500_v2.0.a1 Prupe.2G113600_v2.0.a1
pyrus_communis pycom02g19600 pycom02g19610 pycom07g06920 pycom07g06930
rosa_chinensis RchiOBHm_Chr1g0343261 RchiOBHm_Chr1g0343301 RchiOBHm_Chr1g0343371 RchiOBHm_Chr1g0343431 RchiOBHm_Chr1g0343441 RchiOBHm_Chr1g0343521 RchiOBHm_Chr1g0343691 RchiOBHm_Chr1g0343791
rosa_laevigata RLG00000028951 RLG00000028953 RLG00000028965 RLG00000028968 RLG00000028969 RLG00000028971 RLG00000028972 RLG00000028974 RLG00000029891
rosa_multiflora Rmu_sc0000021.1_g000002 Rmu_sc0000335.1_g000046 Rmu_sc0000335.1_g000047 Rmu_sc0000335.1_g000058 Rmu_sc0000335.1_g000061 Rmu_sc0000335.1_g000106 Rmu_sc0000335.1_g000125 Rmu_sc0000544.1_g000010 Rmu_sc0003430.1_g000012 Rmu_sc0005796.1_g000004 Rmu_sc0028268.1_g000001 Rmu_ssc0000259.1_g000038
rosa_roxburghii Rroxscaffold_2G00110090 Rroxscaffold_4G00310350 Rroxscaffold_4G00310610 Rroxscaffold_4G00310710 Rroxscaffold_4G00310740 Rroxscaffold_4G00310760 Rroxscaffold_4G00321110
rosa_rugosa Rorug01G0080100 Rorug01G0080200 Rorug01G0166400 Rorug01G0166500 Rorug01G0166500 Rorug01G0166600 Rorug01G0166700 Rorug01G0166800 Rorug01G0168400 Rorug01G0168500 Rorug01G0168800 Rorug03G0241300 Rorug03G0241400 Rorug04G0001200 Rorug06G0031500 Rorug06G0073200 Rorug06G0264000
rosa_samantha Rh1AG098100 Rh1AG181800 Rh1AG182100 Rh1AG182400 Rh1AG183000 Rh1AG183600 Rh1AG184300 Rh1AG185400 Rh1BG104000 Rh1BG150000 Rh1BG150400 Rh1BG152100 Rh1BG152300 Rh1CG168600 Rh1CG168900 Rh1CG169000 Rh1CG169700 Rh1CG170500 Rh1CG171200 Rh1DG182000 Rh1DG182300 Rh1DG184000 Rh1DG184200
rosa_wichuraiana Rw0G012940 Rw1G007640 Rw1G007670 Rw1G011320 Rw1G015090 Rw1G015110 Rw1G015130 Rw1G015150 Rw1G015290

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1356
AarI CACCTGC 1 cut(s) 969
Acc36I ACCTGC 1 cut(s) 969
Acc65I GGTACC 1 cut(s) 1433
AccB1I GGYRCC 3 cut(s) 106, 1011, 1433
AccI GTMKAC 2 cut(s) 348, 600
AciI CCGC 3 cut(s) 1541, 1626, 1806
AclWI GGATC 3 cut(s) 91, 278, 1469
AcoI YGGCCR 1 cut(s) 1803
AcsI RAATTY 4 cut(s) 159, 1582, 1777, 1790
AcuI CTGAAG 2 cut(s) 21, 1128
AcyI GRCGYC 1 cut(s) 107
AfaI GTAC 4 cut(s) 593, 920, 1435, 1612
AfiI CCNNNNNNNGG 5 cut(s) 1021, 1136, 1137, 1322, 1513
AgsI TTSAA 6 cut(s) 572, 644, 955, 1198, 1243, 1560
AjnI CCWGG 4 cut(s) 313, 970, 1159, 1498
Alw21I GWGCWC 3 cut(s) 506, 768, 1129
Alw26I GTCTC 4 cut(s) 261, 406, 1048, 1541
Alw44I GTGCAC 1 cut(s) 764
AlwI GGATC 3 cut(s) 91, 278, 1469
Ama87I CYCGRG 2 cut(s) 99, 1321
AoxI GGCC 7 cut(s) 130, 144, 387, 1028, 1504, 1762, 1803
ApaLI GTGCAC 1 cut(s) 764
ApoI RAATTY 4 cut(s) 159, 1582, 1777, 1790
Asp718I GGTACC 1 cut(s) 1433
AspLEI GCGC 2 cut(s) 109, 252
AspS9I GGNCC 5 cut(s) 144, 388, 1029, 1711, 1762
AsuC2I CCSGG 3 cut(s) 391, 1322, 1323
AsuHPI GGTGA 5 cut(s) 24, 451, 506, 971, 1202
AsuII TTCGAA 1 cut(s) 933
AvaI CYCGRG 2 cut(s) 99, 1321
AvaII GGWCC 1 cut(s) 1711
AxyI CCTNAGG 1 cut(s) 51
BaeGI GKGCMC 2 cut(s) 768, 1016
BaeI ACNNNNGTAYC 2 cut(s) 1803, 1836
BanI GGYRCC 3 cut(s) 106, 1011, 1433
BanII GRGCYC 1 cut(s) 506
BbsI GAAGAC 3 cut(s) 803, 1813, 1848
Bbv12I GWGCWC 3 cut(s) 506, 768, 1129
BbvCI CCTCAGC 1 cut(s) 165
BccI CCATC 6 cut(s) 31, 118, 878, 1286, 1453, 1489
BciT130I CCWGG 4 cut(s) 315, 972, 1161, 1500
BclI TGATCA 1 cut(s) 1048
BcnI CCSGG 3 cut(s) 391, 1322, 1323
BcoDI GTCTC 4 cut(s) 261, 406, 1048, 1541
BfaI CTAG 3 cut(s) 657, 1392, 1722
BfmI CTRYAG 5 cut(s) 535, 840, 1461, 1467, 1740
BfoI RGCGCY 1 cut(s) 110
BfuAI ACCTGC 1 cut(s) 969
Bme1390I CCNGG 7 cut(s) 315, 391, 972, 1161, 1322, 1323, 1500
Bme18I GGWCC 1 cut(s) 1711
BmeT110I CYCGRG 2 cut(s) 99, 1321
BmgT120I GGNCC 5 cut(s) 144, 388, 1029, 1711, 1762
BmiI GGNNCC 5 cut(s) 21, 108, 1013, 1435, 1713
BmrFI CCNGG 7 cut(s) 315, 391, 972, 1161, 1322, 1323, 1500
BmrI ACTGGG 2 cut(s) 282, 1030
BmsI GCATC 4 cut(s) 134, 619, 641, 1637
BmuI ACTGGG 2 cut(s) 282, 1030
BpiI GAAGAC 3 cut(s) 803, 1813, 1848
BplI GAGNNNNNCTC 2 cut(s) 1538, 1570
BpmI CTGGAG 1 cut(s) 1603
Bpu10I CCTNAGC 3 cut(s) 165, 989, 1429
Bpu14I TTCGAA 1 cut(s) 933
BpuEI CTTGAG 1 cut(s) 1572
BpuMI CCSGG 3 cut(s) 391, 1322, 1323
BsaBI GATNNNNATC 1 cut(s) 282
BsaHI GRCGYC 1 cut(s) 107
BsaJI CCNNGG 6 cut(s) 1092, 1160, 1320, 1321, 1498, 1765
BsaWI WCCGGW 1 cut(s) 1417
BsaXI ACNNNNNCTCC 2 cut(s) 1426, 1456
Bsc4I CCNNNNNNNGG 5 cut(s) 1021, 1136, 1137, 1322, 1513
Bse1I ACTGG 7 cut(s) 205, 288, 807, 1025, 1555, 1608, 1620
Bse21I CCTNAGG 1 cut(s) 51
Bse3DI GCAATG 2 cut(s) 1369, 1806
Bse8I GATNNNNATC 1 cut(s) 282
BseBI CCWGG 4 cut(s) 315, 972, 1161, 1500
BseDI CCNNGG 6 cut(s) 1092, 1160, 1320, 1321, 1498, 1765
BseGI GGATG 6 cut(s) 110, 1081, 1297, 1426, 1481, 1522
BseJI GATNNNNATC 1 cut(s) 282
BseLI CCNNNNNNNGG 5 cut(s) 1021, 1136, 1137, 1322, 1513
BseMI GCAATG 2 cut(s) 1369, 1806
BseMII CTCAG 6 cut(s) 42, 87, 93, 179, 1170, 1443
BseNI ACTGG 7 cut(s) 205, 288, 807, 1025, 1555, 1608, 1620
BseRI GAGGAG 4 cut(s) 68, 806, 860, 1559
BseSI GKGCMC 2 cut(s) 768, 1016
BseYI CCCAGC 1 cut(s) 487
BsgI GTGCAG 1 cut(s) 384
BshFI GGCC 7 cut(s) 132, 146, 389, 1030, 1506, 1764, 1805
BshNI GGYRCC 3 cut(s) 106, 1011, 1433
BsiHKAI GWGCWC 3 cut(s) 506, 768, 1129
BsiHKCI CYCGRG 2 cut(s) 99, 1321
BsiSI CCGG 4 cut(s) 269, 391, 1322, 1418
BslFI GGGAC 2 cut(s) 1697, 1783
BslI CCNNNNNNNGG 5 cut(s) 1021, 1136, 1137, 1322, 1513
BsmAI GTCTC 4 cut(s) 261, 406, 1048, 1541
BsmFI GGGAC 2 cut(s) 1697, 1783
BsnI GGCC 7 cut(s) 132, 146, 389, 1030, 1506, 1764, 1805
BsoBI CYCGRG 2 cut(s) 99, 1321
Bsp119I TTCGAA 1 cut(s) 933
Bsp1286I GDGCHC 4 cut(s) 506, 768, 1016, 1129
Bsp143I GATC 8 cut(s) 83, 283, 1048, 1078, 1213, 1285, 1474, 1645
BspACI CCGC 3 cut(s) 1541, 1626, 1806
BspANI GGCC 7 cut(s) 132, 146, 389, 1030, 1506, 1764, 1805
BspCNI CTCAG 6 cut(s) 43, 86, 92, 178, 1171, 1442
BspHI TCATGA 1 cut(s) 1210
BspLI GGNNCC 5 cut(s) 21, 108, 1013, 1435, 1713
BspMAI CTGCAG 4 cut(s) 844, 1465, 1471, 1744
BspMI ACCTGC 1 cut(s) 969
BspPI GGATC 3 cut(s) 91, 278, 1469
BspQI GCTCTTC 1 cut(s) 1561
BspT104I TTCGAA 1 cut(s) 933
BspT107I GGYRCC 3 cut(s) 106, 1011, 1433
BsrDI GCAATG 2 cut(s) 1369, 1806
BsrI ACTGG 7 cut(s) 205, 288, 807, 1025, 1555, 1608, 1620
BssECI CCNNGG 6 cut(s) 1092, 1160, 1320, 1321, 1498, 1765
BssMI GATC 8 cut(s) 83, 283, 1048, 1078, 1213, 1285, 1474, 1645
BssNAI GTATAC 1 cut(s) 601
BssNI GRCGYC 1 cut(s) 107
BssT1I CCWWGG 2 cut(s) 1092, 1765
Bst1107I GTATAC 1 cut(s) 601
Bst2UI CCWGG 4 cut(s) 315, 972, 1161, 1500
Bst4CI ACNGT 6 cut(s) 213, 770, 959, 1042, 1535, 1603
Bst6I CTCTTC 3 cut(s) 358, 866, 1561
BstACI GRCGYC 1 cut(s) 107
BstBI TTCGAA 1 cut(s) 933
BstC8I GCNNGC 4 cut(s) 226, 986, 1572, 1668
BstDEI CTNAG 9 cut(s) 51, 73, 79, 119, 165, 357, 989, 1179, 1429
BstF5I GGATG 6 cut(s) 110, 1081, 1297, 1426, 1481, 1522
BstH2I RGCGCY 1 cut(s) 110
BstHHI GCGC 2 cut(s) 109, 252
BstKTI GATC 8 cut(s) 86, 286, 1051, 1081, 1216, 1288, 1477, 1648
BstMAI GTCTC 4 cut(s) 261, 406, 1048, 1541
BstMBI GATC 8 cut(s) 83, 283, 1048, 1078, 1213, 1285, 1474, 1645
BstMWI GCNNNNNNNGC 8 cut(s) 115, 371, 782, 901, 1463, 1466, 1469, 1805
BstNI CCWGG 4 cut(s) 315, 972, 1161, 1500
BstNSI RCATGY 2 cut(s) 398, 988
BstSCI CCNGG 7 cut(s) 313, 389, 970, 1159, 1320, 1321, 1498
BstSFI CTRYAG 5 cut(s) 535, 840, 1461, 1467, 1740
BstSLI GKGCMC 2 cut(s) 768, 1016
BstV2I GAAGAC 3 cut(s) 803, 1813, 1848
BstXI CCANNNNNNTGG 1 cut(s) 1288
BstZ17I GTATAC 1 cut(s) 601
Bsu36I CCTNAGG 1 cut(s) 51
BsuRI GGCC 7 cut(s) 132, 146, 389, 1030, 1506, 1764, 1805
BtsCI GGATG 6 cut(s) 110, 1081, 1297, 1426, 1481, 1522
BtsI GCAGTG 1 cut(s) 372
BtsIMutI CAGTG 5 cut(s) 295, 372, 766, 1395, 1540
BveI ACCTGC 1 cut(s) 969
Cac8I GCNNGC 4 cut(s) 226, 986, 1572, 1668
CciI TCATGA 1 cut(s) 1210
CfoI GCGC 2 cut(s) 109, 252
Cfr13I GGNCC 5 cut(s) 144, 388, 1029, 1711, 1762
Cfr9I CCCGGG 1 cut(s) 1321
CseI GACGC 1 cut(s) 1463
CsiI ACCWGGT 1 cut(s) 313
Csp6I GTAC 4 cut(s) 592, 919, 1434, 1611
CviAII CATG 5 cut(s) 141, 395, 547, 985, 1211
CviQI GTAC 4 cut(s) 592, 919, 1434, 1611
DdeI CTNAG 9 cut(s) 51, 73, 79, 119, 165, 357, 989, 1179, 1429
DinI GGCGCC 1 cut(s) 108
DpnI GATC 8 cut(s) 85, 285, 1050, 1080, 1215, 1287, 1476, 1647
DpnII GATC 8 cut(s) 83, 283, 1048, 1078, 1213, 1285, 1474, 1645
EaeI YGGCCR 1 cut(s) 1803
Eam1104I CTCTTC 3 cut(s) 358, 866, 1561
EarI CTCTTC 3 cut(s) 358, 866, 1561
EciI GGCGGA 1 cut(s) 1556
Ecl136II GAGCTC 1 cut(s) 504
Eco130I CCWWGG 2 cut(s) 1092, 1765
Eco24I GRGCYC 1 cut(s) 506
Eco32I GATATC 2 cut(s) 422, 804
Eco47I GGWCC 1 cut(s) 1711
Eco53kI GAGCTC 1 cut(s) 504
Eco57I CTGAAG 2 cut(s) 21, 1128
Eco81I CCTNAGG 1 cut(s) 51
Eco88I CYCGRG 2 cut(s) 99, 1321
EcoICRI GAGCTC 1 cut(s) 504
EcoO109I RGGNCCY 1 cut(s) 1711
EcoRII CCWGG 4 cut(s) 313, 970, 1159, 1498
EcoRV GATATC 2 cut(s) 422, 804
EcoT14I CCWWGG 2 cut(s) 1092, 1765
EcoT22I ATGCAT 1 cut(s) 634
EcoT38I GRGCYC 1 cut(s) 506
EgeI GGCGCC 1 cut(s) 108
EheI GGCGCC 1 cut(s) 108
ErhI CCWWGG 2 cut(s) 1092, 1765
FaeI CATG 5 cut(s) 144, 398, 550, 988, 1214
FaqI GGGAC 2 cut(s) 1697, 1783
FatI CATG 5 cut(s) 140, 394, 546, 984, 1210
FbaI TGATCA 1 cut(s) 1048
FblI GTMKAC 2 cut(s) 348, 600
FokI GGATG 6 cut(s) 97, 1068, 1304, 1433, 1468, 1529
FriOI GRGCYC 1 cut(s) 506
FspBI CTAG 3 cut(s) 657, 1392, 1722
GlaI GCGC 2 cut(s) 108, 251
GsaI CCCAGC 1 cut(s) 491
GsuI CTGGAG 1 cut(s) 1603
HaeII RGCGCY 1 cut(s) 110
HaeIII GGCC 7 cut(s) 132, 146, 389, 1030, 1506, 1764, 1805
HapII CCGG 4 cut(s) 269, 391, 1322, 1418
HgaI GACGC 1 cut(s) 1463
HhaI GCGC 2 cut(s) 109, 252
Hin1I GRCGYC 1 cut(s) 107
Hin1II CATG 5 cut(s) 144, 398, 550, 988, 1214
Hin6I GCGC 2 cut(s) 107, 250
HinP1I GCGC 2 cut(s) 107, 250
HincII GTYRAC 1 cut(s) 349
HindII GTYRAC 1 cut(s) 349
HinfI GANTC 8 cut(s) 5, 11, 77, 350, 483, 848, 1700, 1771
HpaII CCGG 4 cut(s) 269, 391, 1322, 1418
HphI GGTGA 5 cut(s) 24, 451, 506, 971, 1202
Hpy166II GTNNAC 3 cut(s) 349, 601, 766
Hpy188III TCNNGA 7 cut(s) 50, 81, 101, 207, 425, 1211, 1289
Hpy8I GTNNAC 3 cut(s) 349, 601, 766
HpyAV CCTTC 4 cut(s) 45, 638, 1129, 1326
HpyCH4III ACNGT 6 cut(s) 213, 770, 959, 1042, 1535, 1603
HpyCH4IV ACGT 3 cut(s) 452, 921, 937
HpyF10VI GCNNNNNNNGC 8 cut(s) 115, 371, 782, 901, 1463, 1466, 1469, 1805
HpyF3I CTNAG 9 cut(s) 51, 73, 79, 119, 165, 357, 989, 1179, 1429
HpySE526I ACGT 3 cut(s) 452, 921, 937
Hsp92I GRCGYC 1 cut(s) 107
Hsp92II CATG 5 cut(s) 144, 398, 550, 988, 1214
HspAI GCGC 2 cut(s) 107, 250
KasI GGCGCC 1 cut(s) 106
KpnI GGTACC 1 cut(s) 1437
Ksp22I TGATCA 1 cut(s) 1048
Kzo9I GATC 8 cut(s) 83, 283, 1048, 1078, 1213, 1285, 1474, 1645
LguI GCTCTTC 1 cut(s) 1561
LmnI GCTCC 4 cut(s) 52, 55, 271, 1132
LweI GCATC 4 cut(s) 134, 619, 641, 1637
MabI ACCWGGT 1 cut(s) 313
MaeI CTAG 3 cut(s) 657, 1392, 1722
MaeII ACGT 3 cut(s) 452, 921, 937
MaeIII GTNAC 2 cut(s) 1190, 1756
MalI GATC 8 cut(s) 85, 285, 1050, 1080, 1215, 1287, 1476, 1647
MboI GATC 8 cut(s) 83, 283, 1048, 1078, 1213, 1285, 1474, 1645
MhlI GDGCHC 4 cut(s) 506, 768, 1016, 1129
MluCI AATT 7 cut(s) 159, 330, 679, 690, 1582, 1777, 1790
Mly113I GGCGCC 1 cut(s) 107
MlyI GAGTC 5 cut(s) 71, 344, 857, 1694, 1765
MmeI TCCRAC 2 cut(s) 221, 1729
Mph1103I ATGCAT 1 cut(s) 634
MseI TTAA 8 cut(s) 42, 384, 561, 824, 944, 1274, 1661, 1794
MslI CAYNNNNRTG 2 cut(s) 1209, 1250
MspA1I CMGCKG 4 cut(s) 491, 1466, 1472, 1745
MspI CCGG 4 cut(s) 269, 391, 1322, 1418
MspR9I CCNGG 7 cut(s) 315, 391, 972, 1161, 1322, 1323, 1500
MvaI CCWGG 4 cut(s) 315, 972, 1161, 1500
MwoI GCNNNNNNNGC 8 cut(s) 115, 371, 782, 901, 1463, 1466, 1469, 1805
NarI GGCGCC 1 cut(s) 107
NciI CCSGG 3 cut(s) 391, 1322, 1323
NdeII GATC 8 cut(s) 83, 283, 1048, 1078, 1213, 1285, 1474, 1645
NlaIII CATG 5 cut(s) 144, 398, 550, 988, 1214
NlaIV GGNNCC 5 cut(s) 21, 108, 1013, 1435, 1713
NmuCI GTSAC 2 cut(s) 1190, 1756
NsiI ATGCAT 1 cut(s) 634
NspI RCATGY 2 cut(s) 398, 988
NspV TTCGAA 1 cut(s) 933
PaeI GCATGC 1 cut(s) 988
PagI TCATGA 1 cut(s) 1210
PaqCI CACCTGC 1 cut(s) 969
PciSI GCTCTTC 1 cut(s) 1561
PfeI GAWTC 3 cut(s) 5, 11, 483
PleI GAGTC 5 cut(s) 71, 344, 856, 1694, 1765
PluTI GGCGCC 1 cut(s) 110
PpsI GAGTC 5 cut(s) 71, 344, 856, 1694, 1765
PpuMI RGGWCCY 1 cut(s) 1711
PsiI TTATAA 1 cut(s) 1356
Psp124BI GAGCTC 1 cut(s) 506
Psp5II RGGWCCY 1 cut(s) 1711
Psp6I CCWGG 4 cut(s) 313, 970, 1159, 1498
PspFI CCCAGC 1 cut(s) 487
PspGI CCWGG 4 cut(s) 313, 970, 1159, 1498
PspN4I GGNNCC 5 cut(s) 21, 108, 1013, 1435, 1713
PspPI GGNCC 5 cut(s) 144, 388, 1029, 1711, 1762
PspPPI RGGWCCY 1 cut(s) 1711
PstI CTGCAG 4 cut(s) 844, 1465, 1471, 1744
PvuII CAGCTG 4 cut(s) 491, 1466, 1472, 1745
RsaI GTAC 4 cut(s) 593, 920, 1435, 1612
RsaNI GTAC 4 cut(s) 592, 919, 1434, 1611
RseI CAYNNNNRTG 2 cut(s) 1209, 1250
SacI GAGCTC 1 cut(s) 506
SalI GTCGAC 1 cut(s) 347
SapI GCTCTTC 1 cut(s) 1561
SaqAI TTAA 8 cut(s) 42, 384, 561, 824, 944, 1274, 1661, 1794
Sau3AI GATC 8 cut(s) 83, 283, 1048, 1078, 1213, 1285, 1474, 1645
Sau96I GGNCC 5 cut(s) 144, 388, 1029, 1711, 1762
SchI GAGTC 5 cut(s) 71, 344, 857, 1694, 1765
ScrFI CCNGG 7 cut(s) 315, 391, 972, 1161, 1322, 1323, 1500
SduI GDGCHC 4 cut(s) 506, 768, 1016, 1129
SexAI ACCWGGT 1 cut(s) 313
SfaNI GCATC 4 cut(s) 134, 619, 641, 1637
SfcI CTRYAG 5 cut(s) 535, 840, 1461, 1467, 1740
SfoI GGCGCC 1 cut(s) 108
SfuI TTCGAA 1 cut(s) 933
SinI GGWCC 1 cut(s) 1711
SmaI CCCGGG 1 cut(s) 1323
SmiMI CAYNNNNRTG 2 cut(s) 1209, 1250
SmlI CTYRAG 1 cut(s) 1587
SmoI CTYRAG 1 cut(s) 1587
SphI GCATGC 1 cut(s) 988
Sse9I AATT 7 cut(s) 159, 330, 679, 690, 1582, 1777, 1790
SsiI CCGC 3 cut(s) 1541, 1626, 1806
SspDI GGCGCC 1 cut(s) 106
SspI AATATT 1 cut(s) 929
SspMI CTAG 3 cut(s) 657, 1392, 1722
SstI GAGCTC 1 cut(s) 506
StyD4I CCNGG 7 cut(s) 313, 389, 970, 1159, 1320, 1321, 1498
StyI CCWWGG 2 cut(s) 1092, 1765
TaaI ACNGT 6 cut(s) 213, 770, 959, 1042, 1535, 1603
TaiI ACGT 3 cut(s) 455, 924, 940
TaqI TCGA 4 cut(s) 348, 525, 715, 933
TasI AATT 7 cut(s) 159, 330, 679, 690, 1582, 1777, 1790
TatI WGTACW 1 cut(s) 591
TauI GCSGC 1 cut(s) 1808
TfiI GAWTC 3 cut(s) 5, 11, 483
Tru1I TTAA 8 cut(s) 42, 384, 561, 824, 944, 1274, 1661, 1794
Tru9I TTAA 8 cut(s) 42, 384, 561, 824, 944, 1274, 1661, 1794
TscAI CASTG 5 cut(s) 295, 372, 773, 1402, 1540
TseFI GTSAC 2 cut(s) 1190, 1756
Tsp45I GTSAC 2 cut(s) 1190, 1756
TspDTI ATGAA 4 cut(s) 683, 1199, 1437, 1851
TspGWI ACGGA 1 cut(s) 1712
TspMI CCCGGG 1 cut(s) 1321
TspRI CASTG 5 cut(s) 295, 372, 773, 1402, 1540
VneI GTGCAC 1 cut(s) 764
VpaK11BI GGWCC 1 cut(s) 1711
XapI RAATTY 4 cut(s) 159, 1582, 1777, 1790
XceI RCATGY 2 cut(s) 398, 988
XcmI CCANNNNNNNNNTGG 1 cut(s) 1285
XmaI CCCGGG 1 cut(s) 1321
XmiI GTMKAC 2 cut(s) 348, 600
XspI CTAG 3 cut(s) 657, 1392, 1722
Zsp2I ATGCAT 1 cut(s) 634
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.