Rw1G011320

Belongs to the sterol desaturase family

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
Physical Location & Seq
Reverse (-)
25476088 .. 25482213
6126 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G011320.1

Sequence Viewer

Length: 1863 bp
ATGGCTTCCAACCCTGGTATCCTTACTGACTGGCCATGGACACATCTTGGAAACTTTAAGTACTTGGTGCTAGCTCCCTGGGCAATTCACAGCACATACTCGTTTATGGTTAATAATGGAAAAGAGAGAGATCTGTTTTACTTCCTCGTACTTCCATTTCTCTTCTGGAGGATGCTCCACCACCAGATATGGAACTCTCTTTCTCGGTATCAAACTGCCAAAGGCAAAGGCCGAATCAACGACAGTGGACTTGAATTCGAACAAGTTGACCGAGAAAGTAATTGGGATGACCAGATAATATTGGCTGCAATTCTATTCTACCTAGTCGGCAGCTACCTGCCTGGGGCTCAAAATCTACCTTTTTGGAGGATAGATGGAGTTATTGTCACAATGCTGATTCATGCTGGTCCAGTAGAGTTCATCTACTACTGGTTTCACATAGCACTTCACCATCATTTCCTCTACTCTCGCTACCATTCTCACCACCATTCCTCTATTGTCCTTGAGCCAATTACTTCTGTGACTCACACGTTTGCCGAGCACATAGCATATCACGTGCTCTTCGCAATACCACTGATGATTACTGCATTGATGGGATCAGCTTCAATCGTATCCTATTTTGGTTATGTGACTTATATTGACTTCATGAACAATATGGGGCACTGCAATTTCGAGCTCATTCCAGATTGGATTTTCTCTCTTTTCCCCCCTCTCAAGTATCTCATGTATTCTCCGACGTTCCACTCTCTCCACCACACACAATTCCGAACCAATTACTCGCTGTTCATGCCGATCTACGACCACTTATATGGCACCGTGGACAAGTCTACTGATTCTCTATATGAGTTTTCCCTCAAACGAGAGGAGGAATCACCAGATGTCCTGCATCTAAGCCATCTTACAACAGTTGAATCCATTTATCATCTACCTCTAGGGTTTGCTTCCTTGGCCTCTAAATCATTCACATCAACATGGTACTTGTGGTTGGTGTGGCCTGTCACACTGTGGTCTGTGATGCTCACCTGGATATACGGCCGTACATTTGTGGTTGAGAGGCAGCGATTTGATAAACTCAAATTACAAACTTGGGCAATACCAAAATATAGTTTGCAATACTTGATGCAATGGGAAAATGACGCTATCAACAACTTGATTGAGAAAGCTATACTTGAAGCAGAGGAAAAGGGTGTCAAAGTTTTAAGTTTAGGTCTCATGAATCAGAGCGAGGAGCTGAATAGATATGGTGGTTTATATGTCAGCAGGCATCCACGGCTGAAAATTAGGATGGTTGATGGCAGTAGCCTGGTTGTGGCTGTGATATTAAACAGTATTCCAAAAGAGACAACCCAAGTTCTTCTTAGAGGCAAACTCACAAAGGTTGCTGTTGCCATTGCCATTGGTTTGATCCAGAGGGGTATAAAGGTTGCTACATTACACCAGGATGAGTACTGGGAGCTCACTAAATCATTAAGTGAATCAGAGTGCCGGTTGGTCCTCGGAAAAAACTATGGTCACAAGATTTGGTTAGTGGGAAACGGATTAAGTGAGCAAGAACAGTTGAGTGCACCGAAAGGAACAATATTTGTTCCCTTCTCCCAATTCCCACCAAAAAAGTTGCGAAAAGACTGTTACTATCACTGTACTCCAGCCATGAAGATCCCCAAGTCTCTTGAGAATGTTTACTCTTGTGAGAACTGGTTGCCAAGGAGGGTGATGAGTGCGTGGCGTATAGCTGGGATAGTACATGCATTGGAAGGTTGGAATGACCATGAGTGTGGTTATACCATGTCCGATATTGACAAAGTTTGGCAAGCTACTCTTCGACATGGCTTTCAGCCTCTGATCCCCACCACTACTACTTAA

Protein Analysis

620

Amino Acids

71.95

Weight (kDa)

7.44

Isoelectric Point (pI)

31.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FA_hydroxylase PF04116 136 - 272 5.5e-19 Fatty acid hydroxylase
CER1-like_C PF12076 451 - 613 9.4e-73 CER1-like, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000300)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G02190 AT1G02190 AT1G02205 AT1G02205 AT1G02205 AT1G02205 AT1G02205 AT2G37700 AT2G37700 AT2G37700 AT2G37700
fragaria_vesca FvH4_1g22160 FvH4_7g08560 FvH4_7g08560 FvH4_7g08560 FvH4_7g08570 FvH4_7g08570 FvH4_7g08590 FvH4_7g08590
malus_domestica MD02G1226900.v1.1 MD07G1083700.v1.1 MD07G1083800.v1.1 MD07G1086200.v1.1 MD07G1086300.v1.1 MD07G1086700.v1.1 MD13G1075600.v1.1
prunus_persica Prupe.2G112600_v2.0.a1 Prupe.2G112800_v2.0.a1 Prupe.2G113000_v2.0.a1 Prupe.2G113500_v2.0.a1 Prupe.2G113600_v2.0.a1
pyrus_communis pycom02g19600 pycom02g19610 pycom07g06920 pycom07g06930
rosa_chinensis RchiOBHm_Chr1g0343261 RchiOBHm_Chr1g0343301 RchiOBHm_Chr1g0343371 RchiOBHm_Chr1g0343431 RchiOBHm_Chr1g0343441 RchiOBHm_Chr1g0343521 RchiOBHm_Chr1g0343691 RchiOBHm_Chr1g0343791
rosa_laevigata RLG00000028951 RLG00000028953 RLG00000028965 RLG00000028968 RLG00000028969 RLG00000028971 RLG00000028972 RLG00000028974 RLG00000029891
rosa_multiflora Rmu_sc0000021.1_g000002 Rmu_sc0000335.1_g000046 Rmu_sc0000335.1_g000047 Rmu_sc0000335.1_g000058 Rmu_sc0000335.1_g000061 Rmu_sc0000335.1_g000106 Rmu_sc0000335.1_g000125 Rmu_sc0000544.1_g000010 Rmu_sc0003430.1_g000012 Rmu_sc0005796.1_g000004 Rmu_sc0028268.1_g000001 Rmu_ssc0000259.1_g000038
rosa_roxburghii Rroxscaffold_2G00110090 Rroxscaffold_4G00310350 Rroxscaffold_4G00310610 Rroxscaffold_4G00310710 Rroxscaffold_4G00310740 Rroxscaffold_4G00310760 Rroxscaffold_4G00321110
rosa_rugosa Rorug01G0080100 Rorug01G0080200 Rorug01G0166400 Rorug01G0166500 Rorug01G0166500 Rorug01G0166600 Rorug01G0166700 Rorug01G0166800 Rorug01G0168400 Rorug01G0168500 Rorug01G0168800 Rorug03G0241300 Rorug03G0241400 Rorug04G0001200 Rorug06G0031500 Rorug06G0073200 Rorug06G0264000
rosa_samantha Rh1AG098100 Rh1AG181800 Rh1AG182100 Rh1AG182400 Rh1AG183000 Rh1AG183600 Rh1AG184300 Rh1AG185400 Rh1BG104000 Rh1BG150000 Rh1BG150400 Rh1BG152100 Rh1BG152300 Rh1CG168600 Rh1CG168900 Rh1CG169000 Rh1CG169700 Rh1CG170500 Rh1CG171200 Rh1DG182000 Rh1DG182300 Rh1DG184000 Rh1DG184200
rosa_wichuraiana Rw0G012940 Rw1G007640 Rw1G007670 Rw1G011320 Rw1G015090 Rw1G015110 Rw1G015130 Rw1G015150 Rw1G015290

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 345
AccB1I GGYRCC 1 cut(s) 812
AccI GTMKAC 1 cut(s) 827
AclWI GGATC 4 cut(s) 604, 1399, 1651, 1837
AcoI YGGCCR 2 cut(s) 32, 1033
AcsI RAATTY 1 cut(s) 254
AcvI CACGTG 1 cut(s) 556
AdeI CACNNNGTG 1 cut(s) 1005
AfaI GTAC 7 cut(s) 62, 150, 977, 1039, 1448, 1642, 1743
AfiI CCNNNNNNNGG 2 cut(s) 343, 1309
AflIII ACRYGT 1 cut(s) 528
AgsI TTSAA 4 cut(s) 254, 606, 911, 1172
AjnI CCWGG 6 cut(s) 13, 77, 340, 1022, 1302, 1437
AluBI AGCT 9 cut(s) 74, 333, 602, 676, 1163, 1231, 1456, 1733, 1814
AluI AGCT 9 cut(s) 74, 333, 602, 676, 1163, 1231, 1456, 1733, 1814
Alw21I GWGCWC 5 cut(s) 543, 561, 678, 1458, 1567
Alw26I GTCTC 3 cut(s) 1214, 1334, 1671
Alw44I GTGCAC 1 cut(s) 1563
AlwI GGATC 4 cut(s) 604, 1399, 1651, 1837
AlwNI CAGNNNCTG 1 cut(s) 1840
AoxI GGCC 5 cut(s) 32, 229, 948, 992, 1033
ApaLI GTGCAC 1 cut(s) 1563
ApeKI GCWGC 3 cut(s) 305, 330, 1057
ApoI RAATTY 1 cut(s) 254
AspS9I GGNCC 2 cut(s) 407, 1492
AsuHPI GGTGA 5 cut(s) 440, 473, 864, 1012, 1723
AsuII TTCGAA 1 cut(s) 258
AsuNHI GCTAGC 1 cut(s) 70
AvaII GGWCC 2 cut(s) 407, 1492
BaeGI GKGCMC 2 cut(s) 663, 1567
BaeI ACNNNNGTAYC 1 cut(s) 34
BalI TGGCCA 1 cut(s) 34
BanI GGYRCC 1 cut(s) 812
BanII GRGCYC 3 cut(s) 349, 678, 1458
BbrPI CACGTG 1 cut(s) 556
Bbv12I GWGCWC 5 cut(s) 543, 561, 678, 1458, 1567
BbvI GCAGC 3 cut(s) 292, 342, 1069
BccI CCATC 6 cut(s) 368, 459, 586, 903, 1279, 1286
BceAI ACGGC 3 cut(s) 1020, 1048, 1286
BciT130I CCWGG 6 cut(s) 15, 79, 342, 1024, 1304, 1439
BciVI GTATCC 2 cut(s) 29, 622
BcoDI GTCTC 3 cut(s) 1214, 1334, 1671
BfaI CTAG 3 cut(s) 71, 323, 932
BfuAI ACCTGC 1 cut(s) 345
BfuI GTATCC 2 cut(s) 29, 622
BglII AGATCT 1 cut(s) 130
BisI GCNGC 3 cut(s) 306, 331, 1058
BlsI GCNGC 3 cut(s) 307, 332, 1059
BmcAI AGTACT 2 cut(s) 62, 1448
Bme1390I CCNGG 6 cut(s) 15, 79, 342, 1024, 1304, 1439
Bme18I GGWCC 2 cut(s) 407, 1492
BmgT120I GGNCC 2 cut(s) 407, 1492
BmiI GGNNCC 1 cut(s) 814
BmrFI CCNGG 6 cut(s) 15, 79, 342, 1024, 1304, 1439
BmrI ACTGGG 1 cut(s) 1459
BmsI GCATC 5 cut(s) 162, 895, 1005, 1110, 1273
BmtI GCTAGC 1 cut(s) 74
BmuI ACTGGG 1 cut(s) 1459
BplI GAGNNNNNCTC 2 cut(s) 1353, 1385
BpmI CTGGAG 2 cut(s) 187, 1629
Bpu14I TTCGAA 1 cut(s) 258
BpuEI CTTGAG 3 cut(s) 524, 698, 1691
BsaAI YACGTR 1 cut(s) 556
BsaI GGTCTC 1 cut(s) 1214
BsaXI ACNNNNNCTCC 2 cut(s) 369, 399
Bsc4I CCNNNNNNNGG 2 cut(s) 343, 1309
Bse118I RCCGGY 1 cut(s) 1485
Bse1I ACTGG 5 cut(s) 35, 410, 434, 1454, 1700
Bse3DI GCAATG 2 cut(s) 1130, 1389
BseBI CCWGG 6 cut(s) 15, 79, 342, 1024, 1304, 1439
BseGI GGATG 5 cut(s) 177, 292, 1264, 1290, 1447
BseLI CCNNNNNNNGG 2 cut(s) 343, 1309
BseMI GCAATG 2 cut(s) 1130, 1389
BseNI ACTGG 5 cut(s) 35, 410, 434, 1454, 1700
BseRI GAGGAG 2 cut(s) 878, 1241
BseSI GKGCMC 2 cut(s) 663, 1567
BseX3I CGGCCG 1 cut(s) 1033
BseXI GCAGC 3 cut(s) 292, 342, 1069
BseYI CCCAGC 1 cut(s) 1733
Bsh1285I CGRYCG 1 cut(s) 1036
BshFI GGCC 5 cut(s) 34, 231, 950, 994, 1035
BshNI GGYRCC 1 cut(s) 812
BsiEI CGRYCG 1 cut(s) 1036
BsiHKAI GWGCWC 5 cut(s) 543, 561, 678, 1458, 1567
BsiSI CCGG 1 cut(s) 1486
BslI CCNNNNNNNGG 2 cut(s) 343, 1309
BsmAI GTCTC 3 cut(s) 1214, 1334, 1671
BsnI GGCC 5 cut(s) 34, 231, 950, 994, 1035
Bso31I GGTCTC 1 cut(s) 1214
Bsp119I TTCGAA 1 cut(s) 258
Bsp1286I GDGCHC 7 cut(s) 349, 543, 561, 663, 678, 1458, 1567
Bsp143I GATC 6 cut(s) 130, 596, 792, 1404, 1656, 1842
Bsp19I CCATGG 1 cut(s) 35
BspANI GGCC 5 cut(s) 34, 231, 950, 994, 1035
BspHI TCATGA 2 cut(s) 645, 1212
BspLI GGNNCC 1 cut(s) 814
BspMI ACCTGC 1 cut(s) 345
BspOI GCTAGC 1 cut(s) 74
BspPI GGATC 4 cut(s) 604, 1399, 1651, 1837
BspQI GCTCTTC 1 cut(s) 566
BspT104I TTCGAA 1 cut(s) 258
BspT107I GGYRCC 1 cut(s) 812
BspTNI GGTCTC 1 cut(s) 1214
BsrDI GCAATG 2 cut(s) 1130, 1389
BsrFI RCCGGY 1 cut(s) 1485
BsrI ACTGG 5 cut(s) 35, 410, 434, 1454, 1700
BssAI RCCGGY 1 cut(s) 1485
BssMI GATC 6 cut(s) 130, 596, 792, 1404, 1656, 1842
BssT1I CCWWGG 3 cut(s) 35, 945, 1703
Bst2UI CCWGG 6 cut(s) 15, 79, 342, 1024, 1304, 1439
Bst4CI ACNGT 8 cut(s) 245, 817, 907, 1005, 1328, 1557, 1628, 1640
Bst6I CTCTTC 3 cut(s) 167, 566, 1824
BstBAI YACGTR 1 cut(s) 556
BstBI TTCGAA 1 cut(s) 258
BstC8I GCNNGC 3 cut(s) 72, 1262, 1812
BstDEI CTNAG 2 cut(s) 890, 1358
BstDSI CCRYGG 3 cut(s) 35, 816, 1268
BstF5I GGATG 5 cut(s) 177, 292, 1264, 1290, 1447
BstKTI GATC 6 cut(s) 133, 599, 795, 1407, 1659, 1845
BstMAI GTCTC 3 cut(s) 1214, 1334, 1671
BstMBI GATC 6 cut(s) 130, 596, 792, 1404, 1656, 1842
BstMCI CGRYCG 1 cut(s) 1036
BstMWI GCNNNNNNNGC 4 cut(s) 80, 787, 947, 1270
BstNI CCWGG 6 cut(s) 15, 79, 342, 1024, 1304, 1439
BstNSI RCATGY 1 cut(s) 1748
BstSCI CCNGG 6 cut(s) 13, 77, 340, 1022, 1302, 1437
BstSLI GKGCMC 2 cut(s) 663, 1567
BstV1I GCAGC 3 cut(s) 292, 342, 1069
BstX2I RGATCY 2 cut(s) 130, 1656
BstXI CCANNNNNNTGG 2 cut(s) 809, 1775
BstYI RGATCY 2 cut(s) 130, 1656
BstZI CGGCCG 1 cut(s) 1033
BsuI GTATCC 2 cut(s) 29, 622
BsuRI GGCC 5 cut(s) 34, 231, 950, 994, 1035
BtgI CCRYGG 3 cut(s) 35, 816, 1268
BtsCI GGATG 5 cut(s) 177, 292, 1264, 1290, 1447
BtsI GCAGTG 1 cut(s) 661
BtsIMutI CAGTG 5 cut(s) 250, 572, 661, 1001, 1636
BveI ACCTGC 1 cut(s) 345
Cac8I GCNNGC 3 cut(s) 72, 1262, 1812
CaiI CAGNNNCTG 1 cut(s) 1840
CciI TCATGA 2 cut(s) 645, 1212
Cfr10I RCCGGY 1 cut(s) 1485
Cfr13I GGNCC 2 cut(s) 407, 1492
CseI GACGC 1 cut(s) 1145
Csp6I GTAC 7 cut(s) 61, 149, 976, 1038, 1447, 1641, 1742
CspCI CAANNNNNGTGG 2 cut(s) 226, 261
CviQI GTAC 7 cut(s) 61, 149, 976, 1038, 1447, 1641, 1742
DdeI CTNAG 2 cut(s) 890, 1358
DpnI GATC 6 cut(s) 132, 598, 794, 1406, 1658, 1844
DpnII GATC 6 cut(s) 130, 596, 792, 1404, 1656, 1842
DraIII CACNNNGTG 1 cut(s) 1005
EaeI YGGCCR 2 cut(s) 32, 1033
EagI CGGCCG 1 cut(s) 1033
Eam1104I CTCTTC 3 cut(s) 167, 566, 1824
EarI CTCTTC 3 cut(s) 167, 566, 1824
Ecl136II GAGCTC 2 cut(s) 676, 1456
EclXI CGGCCG 1 cut(s) 1033
Eco130I CCWWGG 3 cut(s) 35, 945, 1703
Eco24I GRGCYC 3 cut(s) 349, 678, 1458
Eco31I GGTCTC 1 cut(s) 1214
Eco47I GGWCC 2 cut(s) 407, 1492
Eco52I CGGCCG 1 cut(s) 1033
Eco53kI GAGCTC 2 cut(s) 676, 1456
Eco72I CACGTG 1 cut(s) 556
EcoICRI GAGCTC 2 cut(s) 676, 1456
EcoRI GAATTC 1 cut(s) 254
EcoRII CCWGG 6 cut(s) 13, 77, 340, 1022, 1302, 1437
EcoT14I CCWWGG 3 cut(s) 35, 945, 1703
EcoT22I ATGCAT 1 cut(s) 1750
EcoT38I GRGCYC 3 cut(s) 349, 678, 1458
ErhI CCWWGG 3 cut(s) 35, 945, 1703
FalI AAGNNNNNCTT 6 cut(s) 1152, 1184, 1341, 1373, 1803, 1835
FblI GTMKAC 1 cut(s) 827
Fnu4HI GCNGC 3 cut(s) 306, 331, 1058
FokI GGATG 5 cut(s) 184, 299, 1251, 1297, 1454
FriOI GRGCYC 3 cut(s) 349, 678, 1458
Fsp4HI GCNGC 3 cut(s) 306, 331, 1058
FspBI CTAG 3 cut(s) 71, 323, 932
GluI GCNGC 3 cut(s) 306, 331, 1058
GsaI CCCAGC 1 cut(s) 1737
GsuI CTGGAG 2 cut(s) 187, 1629
HaeIII GGCC 5 cut(s) 34, 231, 950, 994, 1035
HapII CCGG 1 cut(s) 1486
HgaI GACGC 1 cut(s) 1145
HincII GTYRAC 1 cut(s) 268
HindII GTYRAC 1 cut(s) 268
HinfI GANTC 8 cut(s) 234, 397, 523, 833, 869, 911, 1216, 1475
HpaII CCGG 1 cut(s) 1486
HphI GGTGA 5 cut(s) 440, 473, 864, 1012, 1723
Hpy166II GTNNAC 6 cut(s) 248, 268, 820, 828, 1565, 1681
Hpy188I TCNGA 7 cut(s) 735, 767, 1221, 1480, 1499, 1792, 1842
Hpy188III TCNNGA 6 cut(s) 166, 646, 683, 1213, 1408, 1670
Hpy8I GTNNAC 6 cut(s) 248, 268, 820, 828, 1565, 1681
Hpy99I CGWCG 1 cut(s) 739
HpyAV CCTTC 2 cut(s) 1600, 1748
HpyCH4III ACNGT 8 cut(s) 245, 817, 907, 1005, 1328, 1557, 1628, 1640
HpyCH4IV ACGT 3 cut(s) 530, 555, 737
HpyCH4V TGCA 8 cut(s) 308, 587, 666, 886, 1111, 1123, 1565, 1748
HpyF10VI GCNNNNNNNGC 4 cut(s) 80, 787, 947, 1270
HpyF3I CTNAG 2 cut(s) 890, 1358
HpySE526I ACGT 3 cut(s) 530, 555, 737
Kzo9I GATC 6 cut(s) 130, 596, 792, 1404, 1656, 1842
LguI GCTCTTC 1 cut(s) 566
LmnI GCTCC 4 cut(s) 79, 180, 1228, 1453
Lsp1109I GCAGC 3 cut(s) 292, 342, 1069
LweI GCATC 5 cut(s) 162, 895, 1005, 1110, 1273
MaeI CTAG 3 cut(s) 71, 323, 932
MaeII ACGT 3 cut(s) 530, 555, 737
MaeIII GTNAC 6 cut(s) 385, 520, 628, 997, 1511, 1628
MalI GATC 6 cut(s) 132, 598, 794, 1406, 1658, 1844
MboI GATC 6 cut(s) 130, 596, 792, 1404, 1656, 1842
MboII GAAGA 5 cut(s) 154, 553, 1346, 1666, 1811
MflI RGATCY 2 cut(s) 130, 1656
MhlI GDGCHC 7 cut(s) 349, 543, 561, 663, 678, 1458, 1567
MlsI TGGCCA 1 cut(s) 34
MluNI TGGCCA 1 cut(s) 34
MlyI GAGTC 1 cut(s) 517
MmeI TCCRAC 3 cut(s) 33, 758, 1739
Mox20I TGGCCA 1 cut(s) 34
Mph1103I ATGCAT 1 cut(s) 1750
MscI TGGCCA 1 cut(s) 34
MseI TTAA 7 cut(s) 57, 111, 1199, 1322, 1469, 1541, 1861
MslI CAYNNNNRTG 4 cut(s) 807, 970, 1440, 1773
Msp20I TGGCCA 1 cut(s) 34
MspI CCGG 1 cut(s) 1486
MspR9I CCNGG 6 cut(s) 15, 79, 342, 1024, 1304, 1439
MvaI CCWGG 6 cut(s) 15, 79, 342, 1024, 1304, 1439
MwoI GCNNNNNNNGC 4 cut(s) 80, 787, 947, 1270
NcoI CCATGG 1 cut(s) 35
NdeII GATC 6 cut(s) 130, 596, 792, 1404, 1656, 1842
NheI GCTAGC 1 cut(s) 70
NlaIV GGNNCC 1 cut(s) 814
NmeAIII GCCGAG 1 cut(s) 562
NmuCI GTSAC 5 cut(s) 385, 520, 628, 997, 1511
NsiI ATGCAT 1 cut(s) 1750
NspI RCATGY 1 cut(s) 1748
NspV TTCGAA 1 cut(s) 258
PagI TCATGA 2 cut(s) 645, 1212
PasI CCCWGGG 1 cut(s) 78
PciSI GCTCTTC 1 cut(s) 566
PfeI GAWTC 7 cut(s) 234, 397, 833, 869, 911, 1216, 1475
PkrI GCNGC 3 cut(s) 307, 332, 1059
PleI GAGTC 1 cut(s) 517
PmaCI CACGTG 1 cut(s) 556
PmlI CACGTG 1 cut(s) 556
PpsI GAGTC 1 cut(s) 517
Ppu21I YACGTR 1 cut(s) 556
Psp124BI GAGCTC 2 cut(s) 678, 1458
Psp6I CCWGG 6 cut(s) 13, 77, 340, 1022, 1302, 1437
PspCI CACGTG 1 cut(s) 556
PspFI CCCAGC 1 cut(s) 1733
PspGI CCWGG 6 cut(s) 13, 77, 340, 1022, 1302, 1437
PspN4I GGNNCC 1 cut(s) 814
PspPI GGNCC 2 cut(s) 407, 1492
PstNI CAGNNNCTG 1 cut(s) 1840
PsuI RGATCY 2 cut(s) 130, 1656
RsaI GTAC 7 cut(s) 62, 150, 977, 1039, 1448, 1642, 1743
RsaNI GTAC 7 cut(s) 61, 149, 976, 1038, 1447, 1641, 1742
RseI CAYNNNNRTG 4 cut(s) 807, 970, 1440, 1773
SacI GAGCTC 2 cut(s) 678, 1458
SapI GCTCTTC 1 cut(s) 566
SaqAI TTAA 7 cut(s) 57, 111, 1199, 1322, 1469, 1541, 1861
SatI GCNGC 3 cut(s) 306, 331, 1058
Sau3AI GATC 6 cut(s) 130, 596, 792, 1404, 1656, 1842
Sau96I GGNCC 2 cut(s) 407, 1492
ScaI AGTACT 2 cut(s) 62, 1448
SchI GAGTC 1 cut(s) 517
ScrFI CCNGG 6 cut(s) 15, 79, 342, 1024, 1304, 1439
SduI GDGCHC 7 cut(s) 349, 543, 561, 663, 678, 1458, 1567
SfaNI GCATC 5 cut(s) 162, 895, 1005, 1110, 1273
SfuI TTCGAA 1 cut(s) 258
SinI GGWCC 2 cut(s) 407, 1492
SmiMI CAYNNNNRTG 4 cut(s) 807, 970, 1440, 1773
SmlI CTYRAG 3 cut(s) 503, 713, 1670
SmoI CTYRAG 3 cut(s) 503, 713, 1670
SspI AATATT 2 cut(s) 300, 1581
SspMI CTAG 3 cut(s) 71, 323, 932
SstI GAGCTC 2 cut(s) 678, 1458
StyD4I CCNGG 6 cut(s) 13, 77, 340, 1022, 1302, 1437
StyI CCWWGG 3 cut(s) 35, 945, 1703
TaaI ACNGT 8 cut(s) 245, 817, 907, 1005, 1328, 1557, 1628, 1640
TaiI ACGT 3 cut(s) 533, 558, 740
TaqI TCGA 3 cut(s) 258, 672, 1822
TaqII GACCGA 1 cut(s) 285
TatI WGTACW 4 cut(s) 60, 1446, 1640, 1741
TfiI GAWTC 7 cut(s) 234, 397, 833, 869, 911, 1216, 1475
Tru1I TTAA 7 cut(s) 57, 111, 1199, 1322, 1469, 1541, 1861
Tru9I TTAA 7 cut(s) 57, 111, 1199, 1322, 1469, 1541, 1861
TscAI CASTG 5 cut(s) 250, 579, 668, 1008, 1643
TseFI GTSAC 5 cut(s) 385, 520, 628, 997, 1511
TseI GCWGC 3 cut(s) 305, 330, 1057
Tsp45I GTSAC 5 cut(s) 385, 520, 628, 997, 1511
TspDTI ATGAA 7 cut(s) 389, 409, 634, 662, 775, 1229, 1667
TspGWI ACGGA 1 cut(s) 1551
TspRI CASTG 5 cut(s) 250, 579, 668, 1008, 1643
VneI GTGCAC 1 cut(s) 1563
VpaK11BI GGWCC 2 cut(s) 407, 1492
XapI RAATTY 1 cut(s) 254
XceI RCATGY 1 cut(s) 1748
XcmI CCANNNNNNNNNTGG 1 cut(s) 162
XmiI GTMKAC 1 cut(s) 827
XspI CTAG 3 cut(s) 71, 323, 932
ZrmI AGTACT 2 cut(s) 62, 1448
Zsp2I ATGCAT 1 cut(s) 1750
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.