Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0000300

Physical Location & Seq

Genomic Coordinates Forward (+)

17138061 .. 17139410

Gene Structure 1350 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G113000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 657 bp

ATGCAGGGTGAGGAGCTGAACAGATACGGGGGTCTATATGTTCACAGGTATCCTGAGCTGAAAATGAAGGTGGTGGATGGAAGTAGCTTAGCTGTGGCTGTAATCTTAAACAGCATTCCAAAAGGGACAACCGAAGTTCTTCTGAGAGGCAACCTCACCAAGGTTGCTTATGCCACTGCCTTTGCTTTGTGTCAGAAGGGTATCCAGGTAGCTACTTTGAACCAGACCGAGTATTTGAAGCTAACAAAATCATTAAATGTCACTGACAGTCGTTTGGTCCTTGCAAGAAGTTATGCCCAAAAGATTTGGTTAGTGGGAGATGGATTGAGTGAAGAAGAACAACTGAGAGCACCGAAAGGAACATTATTTGTTCCTTTCTCCCAATTCCCACAAAAAAAACTGCGTAAAGACTGCTTCTACCACTACACTCCAGCAATGAAGACACCCCCATCTCTTGAGAATGTTCATGCTTGTGAGAATTGGTTGCCAAGAAGGGTGATGAGTGCATGGCGCATAGCAGGCATAGTGCATGCCTTGGAAGGCTGGAAGGAGCATGAGTGTGGGTACAACATGTCCAATATTGACAAAGTTTGGCAAGCAACTCTCCAACATGGCTTTCAGCCTCTCATGATCTCTACCACCCACACCAAAAATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0006629 GO:0008150 GO:0008152 GO:0012505 GO:0016020 GO:0016491 GO:0031984 GO:0042175 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044238 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0055114 GO:0071704 GO:0098827

KEGG Pathways

Metabolic & Signaling

ko00073 ko01110 map00073 map01110

Pfam Domains

Protein Families

FA_hydroxylase Wax2_C

Protein Analysis

219

Amino Acids

24.67

Weight (kDa)

9.32

Isoelectric Point (pI)

46.54

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000300)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G02190 AT1G02190 AT1G02205 AT1G02205 AT1G02205 AT1G02205 AT1G02205 AT2G37700 AT2G37700 AT2G37700 AT2G37700
fragaria_vesca	FvH4_1g22160 FvH4_7g08560 FvH4_7g08560 FvH4_7g08560 FvH4_7g08570 FvH4_7g08570 FvH4_7g08590 FvH4_7g08590
malus_domestica	MD02G1226900.v1.1 MD07G1083700.v1.1 MD07G1083800.v1.1 MD07G1086200.v1.1 MD07G1086300.v1.1 MD07G1086700.v1.1 MD13G1075600.v1.1
prunus_persica	Prupe.2G112600_v2.0.a1 Prupe.2G112800_v2.0.a1 Prupe.2G113000_v2.0.a1 Prupe.2G113500_v2.0.a1 Prupe.2G113600_v2.0.a1
pyrus_communis	pycom02g19600 pycom02g19610 pycom07g06920 pycom07g06930
rosa_chinensis	RchiOBHm_Chr1g0343261 RchiOBHm_Chr1g0343301 RchiOBHm_Chr1g0343371 RchiOBHm_Chr1g0343431 RchiOBHm_Chr1g0343441 RchiOBHm_Chr1g0343521 RchiOBHm_Chr1g0343691 RchiOBHm_Chr1g0343791
rosa_laevigata	RLG00000028951 RLG00000028953 RLG00000028965 RLG00000028968 RLG00000028969 RLG00000028971 RLG00000028972 RLG00000028974 RLG00000029891
rosa_multiflora	Rmu_sc0000021.1_g000002 Rmu_sc0000335.1_g000046 Rmu_sc0000335.1_g000047 Rmu_sc0000335.1_g000058 Rmu_sc0000335.1_g000061 Rmu_sc0000335.1_g000106 Rmu_sc0000335.1_g000125 Rmu_sc0000544.1_g000010 Rmu_sc0003430.1_g000012 Rmu_sc0005796.1_g000004 Rmu_sc0028268.1_g000001 Rmu_ssc0000259.1_g000038
rosa_roxburghii	Rroxscaffold_2G00110090 Rroxscaffold_4G00310350 Rroxscaffold_4G00310610 Rroxscaffold_4G00310710 Rroxscaffold_4G00310740 Rroxscaffold_4G00310760 Rroxscaffold_4G00321110
rosa_rugosa	Rorug01G0080100 Rorug01G0080200 Rorug01G0166400 Rorug01G0166500 Rorug01G0166500 Rorug01G0166600 Rorug01G0166700 Rorug01G0166800 Rorug01G0168400 Rorug01G0168500 Rorug01G0168800 Rorug03G0241300 Rorug03G0241400 Rorug04G0001200 Rorug06G0031500 Rorug06G0073200 Rorug06G0264000
rosa_samantha	Rh1AG098100 Rh1AG181800 Rh1AG182100 Rh1AG182400 Rh1AG183000 Rh1AG183600 Rh1AG184300 Rh1AG185400 Rh1BG104000 Rh1BG150000 Rh1BG150400 Rh1BG152100 Rh1BG152300 Rh1CG168600 Rh1CG168900 Rh1CG169000 Rh1CG169700 Rh1CG170500 Rh1CG171200 Rh1DG182000 Rh1DG182300 Rh1DG184000 Rh1DG184200
rosa_wichuraiana	Rw0G012940 Rw1G007640 Rw1G007670 Rw1G011320 Rw1G015090 Rw1G015110 Rw1G015130 Rw1G015150 Rw1G015290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AfaI	GTAC	1 cut(s)	566
AfiI	CCNNNNNNNGG	1 cut(s)	160
AflIII	ACRYGT	1 cut(s)	570
AgsI	TTSAA	2 cut(s)	220, 238
AjnI	CCWGG	1 cut(s)	204
AjuI	GAANNNNNNNTTGG	2 cut(s)	600, 632
AluBI	AGCT	6 cut(s)	16, 58, 87, 92, 212, 241
AluI	AGCT	6 cut(s)	16, 58, 87, 92, 212, 241
Alw21I	GWGCWC	1 cut(s)	352
ArsI	GACNNNNNNTTYG	2 cut(s)	217, 249
Asp700I	GAANNNNTTC	1 cut(s)	138
AspLEI	GCGC	1 cut(s)	513
AspS9I	GGNCC	1 cut(s)	277
AsuHPI	GGTGA	3 cut(s)	20, 148, 508
AvaII	GGWCC	1 cut(s)	277
BaeI	ACNNNNGTAYC	2 cut(s)	16, 49
BbsI	GAAGAC	1 cut(s)	446
Bbv12I	GWGCWC	1 cut(s)	352
BccI	CCATC	3 cut(s)	71, 314, 457
BciT130I	CCWGG	1 cut(s)	206
BciVI	GTATCC	2 cut(s)	60, 212
BfuI	GTATCC	2 cut(s)	60, 212
BlpI	GCTNAGC	1 cut(s)	88
Bme1390I	CCNGG	1 cut(s)	206
Bme18I	GGWCC	1 cut(s)	277
BmgT120I	GGNCC	1 cut(s)	277
BmrFI	CCNGG	1 cut(s)	206
BpiI	GAAGAC	1 cut(s)	446
BplI	GAGNNNNNCTC	2 cut(s)	138, 170
BpmI	CTGGAG	1 cut(s)	414
Bpu10I	CCTNAGC	1 cut(s)	54
Bpu1102I	GCTNAGC	1 cut(s)	88
BpuEI	CTTGAG	1 cut(s)	476
BsaJI	CCNNGG	2 cut(s)	159, 534
BsaXI	ACNNNNNCTCC	2 cut(s)	542, 572
Bsc4I	CCNNNNNNNGG	1 cut(s)	160
Bse3DI	GCAATG	1 cut(s)	441
BseBI	CCWGG	1 cut(s)	206
BseDI	CCNNGG	2 cut(s)	159, 534
BseGI	GGATG	1 cut(s)	82
BseLI	CCNNNNNNNGG	1 cut(s)	160
BseMI	GCAATG	1 cut(s)	441
BseMII	CTCAG	3 cut(s)	45, 134, 335
BseRI	GAGGAG	1 cut(s)	26
BsiHKAI	GWGCWC	1 cut(s)	352
BslFI	GGGAC	1 cut(s)	139
BslI	CCNNNNNNNGG	1 cut(s)	160
BsmFI	GGGAC	1 cut(s)	139
BsmI	GAATGC	1 cut(s)	114
Bsp1286I	GDGCHC	1 cut(s)	352
Bsp143I	GATC	1 cut(s)	630
Bsp1720I	GCTNAGC	1 cut(s)	88
BspCNI	CTCAG	3 cut(s)	46, 135, 336
BspHI	TCATGA	1 cut(s)	627
BsrDI	GCAATG	1 cut(s)	441
BssECI	CCNNGG	2 cut(s)	159, 534
BssMI	GATC	1 cut(s)	630
BssT1I	CCWWGG	2 cut(s)	159, 534
Bst2UI	CCWGG	1 cut(s)	206
Bst4CI	ACNGT	1 cut(s)	269
BstC8I	GCNNGC	3 cut(s)	520, 531, 597
BstDEI	CTNAG	4 cut(s)	54, 88, 143, 344
BstENI	CCTNNNNNAGG	1 cut(s)	158
BstF5I	GGATG	1 cut(s)	82
BstHHI	GCGC	1 cut(s)	513
BstKTI	GATC	1 cut(s)	633
BstMBI	GATC	1 cut(s)	630
BstMWI	GCNNNNNNNGC	1 cut(s)	519
BstNI	CCWGG	1 cut(s)	206
BstNSI	RCATGY	2 cut(s)	533, 574
BstSCI	CCNGG	1 cut(s)	204
BstV2I	GAAGAC	1 cut(s)	446
BsuI	GTATCC	2 cut(s)	60, 212
BtsCI	GGATG	1 cut(s)	82
BtsI	GCAGTG	1 cut(s)	174
BtsIMutI	CAGTG	2 cut(s)	174, 261
Cac8I	GCNNGC	3 cut(s)	520, 531, 597
CciI	TCATGA	1 cut(s)	627
CfoI	GCGC	1 cut(s)	513
Cfr13I	GGNCC	1 cut(s)	277
Csp6I	GTAC	1 cut(s)	565
CspCI	CAANNNNNGTGG	2 cut(s)	163, 198
CviAII	CATG	7 cut(s)	467, 507, 530, 554, 571, 611, 628
CviQI	GTAC	1 cut(s)	565
DdeI	CTNAG	4 cut(s)	54, 88, 143, 344
DpnI	GATC	1 cut(s)	632
DpnII	GATC	1 cut(s)	630
Eco130I	CCWWGG	2 cut(s)	159, 534
Eco47I	GGWCC	1 cut(s)	277
EcoNI	CCTNNNNNAGG	1 cut(s)	158
EcoRII	CCWGG	1 cut(s)	204
EcoT14I	CCWWGG	2 cut(s)	159, 534
ErhI	CCWWGG	2 cut(s)	159, 534
FaeI	CATG	7 cut(s)	470, 510, 533, 557, 574, 614, 631
FaqI	GGGAC	1 cut(s)	139
FatI	CATG	7 cut(s)	466, 506, 529, 553, 570, 610, 627
FokI	GGATG	1 cut(s)	89
GlaI	GCGC	1 cut(s)	512
GsuI	CTGGAG	1 cut(s)	414
HhaI	GCGC	1 cut(s)	513
Hin1II	CATG	7 cut(s)	470, 510, 533, 557, 574, 614, 631
Hin6I	GCGC	1 cut(s)	511
HinP1I	GCGC	1 cut(s)	511
HphI	GGTGA	3 cut(s)	20, 148, 508
Hpy166II	GTNNAC	1 cut(s)	43
Hpy188I	TCNGA	2 cut(s)	144, 195
Hpy188III	TCNNGA	3 cut(s)	53, 455, 628
Hpy8I	GTNNAC	1 cut(s)	43
HpyAV	CCTTC	5 cut(s)	61, 190, 486, 533, 541
HpyCH4III	ACNGT	1 cut(s)	269
HpyCH4V	TGCA	4 cut(s)	4, 284, 506, 529
HpyF10VI	GCNNNNNNNGC	1 cut(s)	519
HpyF3I	CTNAG	4 cut(s)	54, 88, 143, 344
Hsp92II	CATG	7 cut(s)	470, 510, 533, 557, 574, 614, 631
HspAI	GCGC	1 cut(s)	511
Kzo9I	GATC	1 cut(s)	630
LmnI	GCTCC	2 cut(s)	13, 550
LpnPI	CCDG	8 cut(s)	31, 66, 191, 218, 236, 444, 504, 529
MaeIII	GTNAC	1 cut(s)	259
MalI	GATC	1 cut(s)	632
MboI	GATC	1 cut(s)	630
MboII	GAAGA	4 cut(s)	131, 344, 347, 451
MhlI	GDGCHC	1 cut(s)	352
MluCI	AATT	3 cut(s)	383, 478, 652
MmeI	TCCRAC	1 cut(s)	631
MnlI	CCTC	4 cut(s)	4, 140, 164, 633
MroXI	GAANNNNTTC	1 cut(s)	138
MseI	TTAA	2 cut(s)	107, 254
MslI	CAYNNNNRTG	2 cut(s)	471, 558
MspR9I	CCNGG	1 cut(s)	206
Mva1269I	GAATGC	1 cut(s)	114
MvaI	CCWGG	1 cut(s)	206
MwoI	GCNNNNNNNGC	1 cut(s)	519
NdeII	GATC	1 cut(s)	630
NlaIII	CATG	7 cut(s)	470, 510, 533, 557, 574, 614, 631
NmuCI	GTSAC	1 cut(s)	259
NspI	RCATGY	2 cut(s)	533, 574
PaeI	GCATGC	1 cut(s)	533
PagI	TCATGA	1 cut(s)	627
PciI	ACATGT	1 cut(s)	570
PctI	GAATGC	1 cut(s)	114
PdmI	GAANNNNTTC	1 cut(s)	138
PscI	ACATGT	1 cut(s)	570
Psp6I	CCWGG	1 cut(s)	204
PspGI	CCWGG	1 cut(s)	204
PspPI	GGNCC	1 cut(s)	277
RsaI	GTAC	1 cut(s)	566
RsaNI	GTAC	1 cut(s)	565
RseI	CAYNNNNRTG	2 cut(s)	471, 558
SaqAI	TTAA	2 cut(s)	107, 254
Sau3AI	GATC	1 cut(s)	630
Sau96I	GGNCC	1 cut(s)	277
ScrFI	CCNGG	1 cut(s)	206
SduI	GDGCHC	1 cut(s)	352
SinI	GGWCC	1 cut(s)	277
SmiMI	CAYNNNNRTG	2 cut(s)	471, 558
SmlI	CTYRAG	1 cut(s)	455
SmoI	CTYRAG	1 cut(s)	455
SphI	GCATGC	1 cut(s)	533
Sse9I	AATT	3 cut(s)	383, 478, 652
SspI	AATATT	1 cut(s)	580
StyD4I	CCNGG	1 cut(s)	204
StyI	CCWWGG	2 cut(s)	159, 534
TaaI	ACNGT	1 cut(s)	269
TaqII	GACCGA	1 cut(s)	242
TasI	AATT	3 cut(s)	383, 478, 652
Tru1I	TTAA	2 cut(s)	107, 254
Tru9I	TTAA	2 cut(s)	107, 254
TscAI	CASTG	2 cut(s)	181, 268
TseFI	GTSAC	1 cut(s)	259
Tsp45I	GTSAC	1 cut(s)	259
TspDTI	ATGAA	3 cut(s)	80, 452, 455
TspRI	CASTG	2 cut(s)	181, 268
VpaK11BI	GGWCC	1 cut(s)	277
XagI	CCTNNNNNAGG	1 cut(s)	158
XceI	RCATGY	2 cut(s)	533, 574
XmnI	GAANNNNTTC	1 cut(s)	138

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.