pycom02g19610

Belongs to the sterol desaturase family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
Physical Location & Seq
Reverse (-)
17552088 .. 17558990
6903 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom02g19610.1

Sequence Viewer

Length: 1998 bp
ATGCATTTAAGTCACTGTTGCAATAACAAAAACAGTTACGTACTCATCAACCAACTACTATATATATATATATATATATATTCATACATACCCAAAATATGGCTACTACTCCCGGAATTCTCACTGAATGGCCATGGACTCCTCTTGGAAGCTTTAAGCATGTGGTCGTGGCTCCTTGGATCATTCACGGTACATACTCGTATTTTGCTAACGATGAGGAAGATAAAGATCTATCTTATTTCCTCATATTTCCACTTATTCTGTGGAGGTTTGTCCACAACCAGTTATGGATCTCTCTTTCTCGATATCGAACGGCCAAGGGCAACGGCCGGATTGTTGACAAGGGCCTCGAATTCGAACAAGTCGACAGAGAAAGAAACTGGGATCGATCAAATATTGTTCAACTCAATTCTATTCTACCTAGGGAGCAGGCACTTGCCAGGGGCTTCAAACCTGCCAATGTGGAGGACAGATGGAGTTATTCTAACAATTCTGCTTCATGCTGGTCCAGTGGAGTTTCTCTACTACTGGTTCCACAGAGCACTTCACCACCATTTCCTATACTCTCGCTACCACTCTCATCACCATTCCTCCATTGTCACTGAGCCAATCACTTCTGTGATCCACCCATTTGCGGAGCACATCGCATATTTCATACTCTTTGCTATACCAATGTTGACAACTATATTCACCGGAACAACTTCTGTCGCAGTCTATGCTGGTTATTTAACTTATATTGACTTCATGAACAACATGGGACATTGCAATTTTGAGCTCATTCCAAATTGGCTCTTCACCATTTTCCCCCCTCTCAAGTATTTCATGTACACTCCATCGTACCATTCCTTGCACCATACACAATTCAGGACCAATTACTCTCTCTTCATGCCAATCTACGACTGCATGTATGGCACCATGGACAAATCAAGTGATTCCCTCTATCAAACTTCGCTCACGAGAGGGGAGGAATCGCCAGATGTCCTCCATCTAACCCATCTAACAACGCCCGAGTCCATATATTATCTACCGCAAGGATTTGTTTCCTTGGCGTCTAGGCCCCACACAAGGACGTGGTACTTATGGTTGATGTGGCCTCTCACATTGTGGTCCATGGTGATAACTTGGATCTATGGCCGTACATTTGTCGTCGAAAGGCACCGCTTTGACGAGCTCAAATTACAGACTTGGGCTATTCCAAAGTACAGTTTGCAATACTTTATGAAATGGCAAAGTGAAGCTATCAATGGCTTGATTGAGGAAGCCATACTTGATGCAGAGGAAAAAGGTGTCAAAGTTTTAAGCCTCGGCCTCTTAAATCAGGGTGAAGAGTTGAATAGATATGGCGGTCTCTATGTTCAAAGGCATCCACATCTCAAAGTCAAGGTGGTGGATGGAAGTAGCTTAGCTGTGGCTGTAATCCTAAACAGCATTCCAAAAGGGACAACTCAAGTCGTCCTTAGAGGCAATCTCACAAAGGTTGCTTATGCCATTGCCTATGCTTTGAGCCAGAAGGGTATCCAGGTAGCTACATTATACCAGGCTGAGCATTTGAAACTCACCAAATCACTAAATGGCACTAAAAGTAACCTAATTGTTGCAAAAAGCTATGCACAAAAGATATGGTTGGTGGGTGATGGATTGACCCAAAAAGAACAGATGCGTGCACCAAAAGGAACACTATTTGTTCCCTTCTCACAATTCCCACCCAAAAAATTGCGCAAGGATTGCTTCTATCATTACACTCCAGCAATGAAGACTCCCGCATCTCTTGAGAATGTTCACTCTTGCGAGAACTGGTTGCCAAGAAGGGTGATGAGTGCATGGCGAGTTGCGGGCATAGTGCATGCCTTGGAAGGATGGAAGGAGCATGAGTGTGGTTACACCATGTCCAACAGCGACAAAGTTTGGCAAGCAAGTCTTGTGCATGGGTTTCAGCCTCTGACGATCATCCTACCGCTCACACAAAAAATTAGAGATCTACAGCTTCCTATTAAATAA

Protein Analysis

666

Amino Acids

76.58

Weight (kDa)

9.16

Isoelectric Point (pI)

33.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FA_hydroxylase PF04116 167 - 305 1.8e-20 Fatty acid hydroxylase
CER1-like_C PF12076 484 - 646 4.8e-73 CER1-like, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000300)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G02190 AT1G02190 AT1G02205 AT1G02205 AT1G02205 AT1G02205 AT1G02205 AT2G37700 AT2G37700 AT2G37700 AT2G37700
fragaria_vesca FvH4_1g22160 FvH4_7g08560 FvH4_7g08560 FvH4_7g08560 FvH4_7g08570 FvH4_7g08570 FvH4_7g08590 FvH4_7g08590
malus_domestica MD02G1226900.v1.1 MD07G1083700.v1.1 MD07G1083800.v1.1 MD07G1086200.v1.1 MD07G1086300.v1.1 MD07G1086700.v1.1 MD13G1075600.v1.1
prunus_persica Prupe.2G112600_v2.0.a1 Prupe.2G112800_v2.0.a1 Prupe.2G113000_v2.0.a1 Prupe.2G113500_v2.0.a1 Prupe.2G113600_v2.0.a1
pyrus_communis pycom02g19600 pycom02g19610 pycom07g06920 pycom07g06930
rosa_chinensis RchiOBHm_Chr1g0343261 RchiOBHm_Chr1g0343301 RchiOBHm_Chr1g0343371 RchiOBHm_Chr1g0343431 RchiOBHm_Chr1g0343441 RchiOBHm_Chr1g0343521 RchiOBHm_Chr1g0343691 RchiOBHm_Chr1g0343791
rosa_laevigata RLG00000028951 RLG00000028953 RLG00000028965 RLG00000028968 RLG00000028969 RLG00000028971 RLG00000028972 RLG00000028974 RLG00000029891
rosa_multiflora Rmu_sc0000021.1_g000002 Rmu_sc0000335.1_g000046 Rmu_sc0000335.1_g000047 Rmu_sc0000335.1_g000058 Rmu_sc0000335.1_g000061 Rmu_sc0000335.1_g000106 Rmu_sc0000335.1_g000125 Rmu_sc0000544.1_g000010 Rmu_sc0003430.1_g000012 Rmu_sc0005796.1_g000004 Rmu_sc0028268.1_g000001 Rmu_ssc0000259.1_g000038
rosa_roxburghii Rroxscaffold_2G00110090 Rroxscaffold_4G00310350 Rroxscaffold_4G00310610 Rroxscaffold_4G00310710 Rroxscaffold_4G00310740 Rroxscaffold_4G00310760 Rroxscaffold_4G00321110
rosa_rugosa Rorug01G0080100 Rorug01G0080200 Rorug01G0166400 Rorug01G0166500 Rorug01G0166500 Rorug01G0166600 Rorug01G0166700 Rorug01G0166800 Rorug01G0168400 Rorug01G0168500 Rorug01G0168800 Rorug03G0241300 Rorug03G0241400 Rorug04G0001200 Rorug06G0031500 Rorug06G0073200 Rorug06G0264000
rosa_samantha Rh1AG098100 Rh1AG181800 Rh1AG182100 Rh1AG182400 Rh1AG183000 Rh1AG183600 Rh1AG184300 Rh1AG185400 Rh1BG104000 Rh1BG150000 Rh1BG150400 Rh1BG152100 Rh1BG152300 Rh1CG168600 Rh1CG168900 Rh1CG169000 Rh1CG169700 Rh1CG170500 Rh1CG171200 Rh1DG182000 Rh1DG182300 Rh1DG184000 Rh1DG184200
rosa_wichuraiana Rw0G012940 Rw1G007640 Rw1G007670 Rw1G011320 Rw1G015090 Rw1G015110 Rw1G015130 Rw1G015150 Rw1G015290

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1718
Acc36I ACCTGC 1 cut(s) 462
AccB1I GGYRCC 2 cut(s) 911, 1155
AccB7I CCANNNNNTGG 1 cut(s) 99
AccBSI CCGCTC 1 cut(s) 1957
AccI GTMKAC 1 cut(s) 365
AciI CCGC 7 cut(s) 635, 1028, 1159, 1344, 1761, 1832, 1955
AclWI GGATC 5 cut(s) 187, 298, 392, 616, 1133
AcoI YGGCCR 4 cut(s) 130, 314, 327, 1132
AcsI RAATTY 2 cut(s) 116, 352
AcyI GRCGYC 1 cut(s) 1049
AdeI CACNNNGTG 1 cut(s) 1104
AfaI GTAC 7 cut(s) 42, 192, 827, 839, 1076, 1138, 1202
AfiI CCNNNNNNNGG 3 cut(s) 99, 634, 1065
AgsI TTSAA 5 cut(s) 403, 450, 1333, 1358, 1552
AjiI CACGTC 1 cut(s) 1071
AjnI CCWGG 3 cut(s) 439, 1518, 1536
AleI CACNNNNGTG 1 cut(s) 617
AluBI AGCT 9 cut(s) 152, 775, 1171, 1238, 1401, 1406, 1526, 1605, 1984
AluI AGCT 9 cut(s) 152, 775, 1171, 1238, 1401, 1406, 1526, 1605, 1984
Alw21I GWGCWC 5 cut(s) 544, 642, 777, 1173, 1666
Alw26I GTCTC 1 cut(s) 1352
Alw44I GTGCAC 1 cut(s) 1662
AlwI GGATC 5 cut(s) 187, 298, 392, 616, 1133
AlwNI CAGNNNCTG 1 cut(s) 1939
Ama87I CYCGRG 1 cut(s) 1007
AoxI GGCC 8 cut(s) 130, 314, 327, 345, 1055, 1091, 1132, 1306
ApaLI GTGCAC 1 cut(s) 1662
ApoI RAATTY 2 cut(s) 116, 352
Asp700I GAANNNNTTC 1 cut(s) 700
AspA2I CCTAGG 1 cut(s) 421
AspLEI GCGC 1 cut(s) 1719
AspS9I GGNCC 5 cut(s) 345, 506, 867, 1056, 1107
AsuC2I CCSGG 1 cut(s) 113
AsuHPI GGTGA 9 cut(s) 539, 575, 682, 787, 1126, 1334, 1549, 1643, 1822
AsuII TTCGAA 1 cut(s) 356
AvaI CYCGRG 1 cut(s) 1007
AvaII GGWCC 3 cut(s) 506, 867, 1107
AvrII CCTAGG 1 cut(s) 421
BaeGI GKGCMC 1 cut(s) 1666
BalI TGGCCA 1 cut(s) 132
BanI GGYRCC 2 cut(s) 911, 1155
BanII GRGCYC 2 cut(s) 777, 1173
BauI CACGAG 1 cut(s) 955
BbsI GAAGAC 1 cut(s) 1760
Bbv12I GWGCWC 5 cut(s) 544, 642, 777, 1173, 1666
BccI CCATC 7 cut(s) 467, 841, 993, 1002, 1385, 1628, 1851
BceAI ACGGC 3 cut(s) 329, 342, 1119
BciT130I CCWGG 3 cut(s) 441, 1520, 1538
BciVI GTATCC 1 cut(s) 1526
BcnI CCSGG 1 cut(s) 113
BcoDI GTCTC 1 cut(s) 1352
BfaI CTAG 2 cut(s) 422, 1053
BfmI CTRYAG 1 cut(s) 1979
BfuAI ACCTGC 1 cut(s) 462
BfuI GTATCC 1 cut(s) 1526
BglII AGATCT 2 cut(s) 228, 1975
BlnI CCTAGG 1 cut(s) 421
BlpI GCTNAGC 2 cut(s) 1402, 1542
Bme1390I CCNGG 4 cut(s) 113, 441, 1520, 1538
Bme18I GGWCC 3 cut(s) 506, 867, 1107
BmeT110I CYCGRG 1 cut(s) 1007
BmgBI CACGTC 1 cut(s) 1071
BmgT120I GGNCC 5 cut(s) 345, 506, 867, 1056, 1107
BmiI GGNNCC 5 cut(s) 173, 533, 913, 1058, 1157
BmrFI CCNGG 4 cut(s) 113, 441, 1520, 1538
BmrI ACTGGG 1 cut(s) 390
BmsI GCATC 4 cut(s) 1261, 1372, 1647, 1772
BmuI ACTGGG 1 cut(s) 390
BpiI GAAGAC 1 cut(s) 1760
BplI GAGNNNNNCTC 2 cut(s) 1452, 1484
BpmI CTGGAG 1 cut(s) 1728
Bpu1102I GCTNAGC 2 cut(s) 1402, 1542
Bpu14I TTCGAA 1 cut(s) 356
BpuEI CTTGAG 3 cut(s) 797, 1431, 1790
BpuMI CCSGG 1 cut(s) 113
Bsa29I ATCGAT 1 cut(s) 387
BsaAI YACGTR 1 cut(s) 40
BsaBI GATNNNNATC 1 cut(s) 227
BsaHI GRCGYC 1 cut(s) 1049
BsaI GGTCTC 1 cut(s) 1352
BsaWI WCCGGW 1 cut(s) 692
BsaXI ACNNNNNCTCC 4 cut(s) 575, 605, 1856, 1886
Bsc4I CCNNNNNNNGG 3 cut(s) 99, 634, 1065
Bse1I ACTGG 5 cut(s) 282, 385, 509, 533, 1799
Bse3DI GCAATG 3 cut(s) 760, 1488, 1755
Bse8I GATNNNNATC 1 cut(s) 227
BseBI CCWGG 3 cut(s) 441, 1520, 1538
BseCI ATCGAT 1 cut(s) 387
BseGI GGATG 4 cut(s) 1363, 1396, 1862, 1947
BseJI GATNNNNATC 1 cut(s) 227
BseLI CCNNNNNNNGG 3 cut(s) 99, 634, 1065
BseMI GCAATG 3 cut(s) 760, 1488, 1755
BseMII CTCAG 2 cut(s) 594, 1533
BseNI ACTGG 5 cut(s) 282, 385, 509, 533, 1799
BseRI GAGGAG 1 cut(s) 131
BseSI GKGCMC 1 cut(s) 1666
BseX3I CGGCCG 1 cut(s) 327
Bsh1285I CGRYCG 1 cut(s) 330
BshFI GGCC 8 cut(s) 132, 316, 329, 347, 1057, 1093, 1134, 1308
BshNI GGYRCC 2 cut(s) 911, 1155
BshVI ATCGAT 1 cut(s) 387
BsiEI CGRYCG 1 cut(s) 330
BsiHKAI GWGCWC 5 cut(s) 544, 642, 777, 1173, 1666
BsiHKCI CYCGRG 1 cut(s) 1007
BsiSI CCGG 3 cut(s) 113, 330, 693
BslFI GGGAC 2 cut(s) 771, 1453
BslI CCNNNNNNNGG 3 cut(s) 99, 634, 1065
BsmAI GTCTC 1 cut(s) 1352
BsmFI GGGAC 2 cut(s) 771, 1453
BsmI GAATGC 1 cut(s) 1428
BsnI GGCC 8 cut(s) 132, 316, 329, 347, 1057, 1093, 1134, 1308
Bso31I GGTCTC 1 cut(s) 1352
BsoBI CYCGRG 1 cut(s) 1007
Bsp119I TTCGAA 1 cut(s) 356
Bsp1286I GDGCHC 5 cut(s) 544, 642, 777, 1173, 1666
Bsp1407I TGTACA 1 cut(s) 825
Bsp143I GATC 9 cut(s) 179, 228, 290, 384, 388, 621, 1125, 1944, 1975
Bsp1720I GCTNAGC 2 cut(s) 1402, 1542
Bsp19I CCATGG 3 cut(s) 133, 915, 1110
BspACI CCGC 7 cut(s) 635, 1028, 1159, 1344, 1761, 1832, 1955
BspANI GGCC 8 cut(s) 132, 316, 329, 347, 1057, 1093, 1134, 1308
BspCNI CTCAG 2 cut(s) 595, 1534
BspDI ATCGAT 1 cut(s) 387
BspHI TCATGA 1 cut(s) 744
BspLI GGNNCC 5 cut(s) 173, 533, 913, 1058, 1157
BspMI ACCTGC 1 cut(s) 462
BspPI GGATC 5 cut(s) 187, 298, 392, 616, 1133
BspQI GCTCTTC 1 cut(s) 797
BspT104I TTCGAA 1 cut(s) 356
BspT107I GGYRCC 2 cut(s) 911, 1155
BspTNI GGTCTC 1 cut(s) 1352
BsrBI CCGCTC 1 cut(s) 1957
BsrDI GCAATG 3 cut(s) 760, 1488, 1755
BsrGI TGTACA 1 cut(s) 825
BsrI ACTGG 5 cut(s) 282, 385, 509, 533, 1799
BssMI GATC 9 cut(s) 179, 228, 290, 384, 388, 621, 1125, 1944, 1975
BssNI GRCGYC 1 cut(s) 1049
BssSI CACGAG 1 cut(s) 955
BssT1I CCWWGG 8 cut(s) 133, 175, 317, 421, 915, 1044, 1110, 1848
Bst2BI CACGAG 1 cut(s) 955
Bst2UI CCWGG 3 cut(s) 441, 1520, 1538
Bst4CI ACNGT 4 cut(s) 17, 35, 190, 1205
Bst6I CTCTTC 3 cut(s) 797, 887, 1320
BstACI GRCGYC 1 cut(s) 1049
BstAPI GCANNNNNTGC 2 cut(s) 716, 1725
BstAUI TGTACA 1 cut(s) 825
BstBAI YACGTR 1 cut(s) 40
BstBI TTCGAA 1 cut(s) 356
BstC8I GCNNGC 5 cut(s) 431, 1662, 1834, 1845, 1911
BstDEI CTNAG 4 cut(s) 603, 1402, 1457, 1542
BstDSI CCRYGG 3 cut(s) 133, 915, 1110
BstF5I GGATG 4 cut(s) 1363, 1396, 1862, 1947
BstHHI GCGC 1 cut(s) 1719
BstKTI GATC 9 cut(s) 182, 231, 293, 387, 391, 624, 1128, 1947, 1978
BstMAI GTCTC 1 cut(s) 1352
BstMBI GATC 9 cut(s) 179, 228, 290, 384, 388, 621, 1125, 1944, 1975
BstMCI CGRYCG 1 cut(s) 330
BstMWI GCNNNNNNNGC 3 cut(s) 716, 909, 1725
BstNI CCWGG 3 cut(s) 441, 1520, 1538
BstNSI RCATGY 3 cut(s) 163, 907, 1847
BstSCI CCNGG 4 cut(s) 111, 439, 1518, 1536
BstSFI CTRYAG 1 cut(s) 1979
BstSLI GKGCMC 1 cut(s) 1666
BstSNI TACGTA 1 cut(s) 40
BstV2I GAAGAC 1 cut(s) 1760
BstX2I RGATCY 4 cut(s) 228, 290, 1125, 1975
BstYI RGATCY 4 cut(s) 228, 290, 1125, 1975
BstZI CGGCCG 1 cut(s) 327
Bsu15I ATCGAT 1 cut(s) 387
BsuI GTATCC 1 cut(s) 1526
BsuRI GGCC 8 cut(s) 132, 316, 329, 347, 1057, 1093, 1134, 1308
BsuTUI ATCGAT 1 cut(s) 387
BtgI CCRYGG 3 cut(s) 133, 915, 1110
BtgZI GCGATG 1 cut(s) 628
BtrI CACGTC 1 cut(s) 1071
BtsCI GGATG 4 cut(s) 1363, 1396, 1862, 1947
BtsIMutI CAGTG 4 cut(s) 13, 122, 516, 600
BveI ACCTGC 1 cut(s) 462
Cac8I GCNNGC 5 cut(s) 431, 1662, 1834, 1845, 1911
CaiI CAGNNNCTG 1 cut(s) 1939
CciI TCATGA 1 cut(s) 744
CfoI GCGC 1 cut(s) 1719
Cfr13I GGNCC 5 cut(s) 345, 506, 867, 1056, 1107
ClaI ATCGAT 1 cut(s) 387
CseI GACGC 1 cut(s) 1038
Csp6I GTAC 7 cut(s) 41, 191, 826, 838, 1075, 1137, 1201
CviQI GTAC 7 cut(s) 41, 191, 826, 838, 1075, 1137, 1201
DdeI CTNAG 4 cut(s) 603, 1402, 1457, 1542
DpnI GATC 9 cut(s) 181, 230, 292, 386, 390, 623, 1127, 1946, 1977
DpnII GATC 9 cut(s) 179, 228, 290, 384, 388, 621, 1125, 1944, 1975
DraIII CACNNNGTG 1 cut(s) 1104
EaeI YGGCCR 4 cut(s) 130, 314, 327, 1132
EagI CGGCCG 1 cut(s) 327
Eam1104I CTCTTC 3 cut(s) 797, 887, 1320
EarI CTCTTC 3 cut(s) 797, 887, 1320
Ecl136II GAGCTC 2 cut(s) 775, 1171
EclXI CGGCCG 1 cut(s) 327
Eco105I TACGTA 1 cut(s) 40
Eco130I CCWWGG 8 cut(s) 133, 175, 317, 421, 915, 1044, 1110, 1848
Eco24I GRGCYC 2 cut(s) 777, 1173
Eco31I GGTCTC 1 cut(s) 1352
Eco32I GATATC 1 cut(s) 307
Eco47I GGWCC 3 cut(s) 506, 867, 1107
Eco52I CGGCCG 1 cut(s) 327
Eco53kI GAGCTC 2 cut(s) 775, 1171
Eco88I CYCGRG 1 cut(s) 1007
EcoICRI GAGCTC 2 cut(s) 775, 1171
EcoO109I RGGNCCY 2 cut(s) 345, 1056
EcoRI GAATTC 2 cut(s) 116, 352
EcoRII CCWGG 3 cut(s) 439, 1518, 1536
EcoRV GATATC 1 cut(s) 307
EcoT14I CCWWGG 8 cut(s) 133, 175, 317, 421, 915, 1044, 1110, 1848
EcoT22I ATGCAT 1 cut(s) 6
EcoT38I GRGCYC 2 cut(s) 777, 1173
ErhI CCWWGG 8 cut(s) 133, 175, 317, 421, 915, 1044, 1110, 1848
FalI AAGNNNNNCTT 8 cut(s) 1251, 1283, 1440, 1472, 1712, 1744, 1902, 1934
FaqI GGGAC 2 cut(s) 771, 1453
FauI CCCGC 2 cut(s) 1768, 1825
FblI GTMKAC 1 cut(s) 365
FokI GGATG 4 cut(s) 1350, 1403, 1869, 1934
FriOI GRGCYC 2 cut(s) 777, 1173
FspBI CTAG 2 cut(s) 422, 1053
FspI TGCGCA 1 cut(s) 1718
GlaI GCGC 1 cut(s) 1718
GsuI CTGGAG 1 cut(s) 1728
HaeIII GGCC 8 cut(s) 132, 316, 329, 347, 1057, 1093, 1134, 1308
HapII CCGG 3 cut(s) 113, 330, 693
HgaI GACGC 1 cut(s) 1038
HhaI GCGC 1 cut(s) 1719
Hin1I GRCGYC 1 cut(s) 1049
Hin6I GCGC 1 cut(s) 1717
HinP1I GCGC 1 cut(s) 1717
HincII GTYRAC 3 cut(s) 339, 366, 678
HindII GTYRAC 3 cut(s) 339, 366, 678
HindIII AAGCTT 1 cut(s) 150
HinfI GANTC 5 cut(s) 138, 932, 968, 1010, 1756
HpaII CCGG 3 cut(s) 113, 330, 693
HphI GGTGA 9 cut(s) 539, 575, 682, 787, 1126, 1334, 1549, 1643, 1822
Hpy166II GTNNAC 7 cut(s) 276, 339, 366, 678, 828, 1664, 1780
Hpy188I TCNGA 1 cut(s) 1941
Hpy188III TCNNGA 5 cut(s) 302, 745, 865, 955, 1769
Hpy8I GTNNAC 7 cut(s) 276, 339, 366, 678, 828, 1664, 1780
Hpy99I CGWCG 1 cut(s) 1151
HpyAV CCTTC 5 cut(s) 1504, 1699, 1800, 1847, 1855
HpyCH4III ACNGT 4 cut(s) 17, 35, 190, 1205
HpyCH4IV ACGT 2 cut(s) 39, 1070
HpyF10VI GCNNNNNNNGC 3 cut(s) 716, 909, 1725
HpyF3I CTNAG 4 cut(s) 603, 1402, 1457, 1542
HpySE526I ACGT 2 cut(s) 39, 1070
Hsp92I GRCGYC 1 cut(s) 1049
HspAI GCGC 1 cut(s) 1717
Kzo9I GATC 9 cut(s) 179, 228, 290, 384, 388, 621, 1125, 1944, 1975
LguI GCTCTTC 1 cut(s) 797
LmnI GCTCC 4 cut(s) 177, 426, 637, 1864
LweI GCATC 4 cut(s) 1261, 1372, 1647, 1772
MaeI CTAG 2 cut(s) 422, 1053
MaeII ACGT 2 cut(s) 39, 1070
MaeIII GTNAC 5 cut(s) 11, 35, 598, 1583, 1877
MalI GATC 9 cut(s) 181, 230, 292, 386, 390, 623, 1127, 1946, 1977
MbiI CCGCTC 1 cut(s) 1957
MboI GATC 9 cut(s) 179, 228, 290, 384, 388, 621, 1125, 1944, 1975
MboII GAAGA 5 cut(s) 232, 784, 874, 1337, 1765
MflI RGATCY 4 cut(s) 228, 290, 1125, 1975
MhlI GDGCHC 5 cut(s) 544, 642, 777, 1173, 1666
MlsI TGGCCA 1 cut(s) 132
MluNI TGGCCA 1 cut(s) 132
MlyI GAGTC 3 cut(s) 132, 1019, 1750
MmeI TCCRAC 1 cut(s) 1914
Mox20I TGGCCA 1 cut(s) 132
Mph1103I ATGCAT 1 cut(s) 6
MroXI GAANNNNTTC 1 cut(s) 700
MscI TGGCCA 1 cut(s) 132
MseI TTAA 6 cut(s) 8, 155, 728, 1298, 1313, 1992
MslI CAYNNNNRTG 2 cut(s) 617, 1872
Msp20I TGGCCA 1 cut(s) 132
MspI CCGG 3 cut(s) 113, 330, 693
MspR9I CCNGG 4 cut(s) 113, 441, 1520, 1538
Mva1269I GAATGC 1 cut(s) 1428
MvaI CCWGG 3 cut(s) 441, 1520, 1538
MwoI GCNNNNNNNGC 3 cut(s) 716, 909, 1725
NciI CCSGG 1 cut(s) 113
NcoI CCATGG 3 cut(s) 133, 915, 1110
NdeII GATC 9 cut(s) 179, 228, 290, 384, 388, 621, 1125, 1944, 1975
NlaIV GGNNCC 5 cut(s) 173, 533, 913, 1058, 1157
NmeAIII GCCGAG 1 cut(s) 1284
NmuCI GTSAC 2 cut(s) 11, 598
NsbI TGCGCA 1 cut(s) 1718
NsiI ATGCAT 1 cut(s) 6
NspI RCATGY 3 cut(s) 163, 907, 1847
NspV TTCGAA 1 cut(s) 356
OliI CACNNNNGTG 1 cut(s) 617
PaeI GCATGC 1 cut(s) 1847
PagI TCATGA 1 cut(s) 744
PciSI GCTCTTC 1 cut(s) 797
PcsI WCGNNNNNNNCGW 1 cut(s) 362
PctI GAATGC 1 cut(s) 1428
PdmI GAANNNNTTC 1 cut(s) 700
PfeI GAWTC 2 cut(s) 932, 968
PflMI CCANNNNNTGG 1 cut(s) 99
PfoI TCCNGGA 1 cut(s) 111
PleI GAGTC 3 cut(s) 132, 1018, 1750
PpsI GAGTC 3 cut(s) 132, 1018, 1750
Ppu21I YACGTR 1 cut(s) 40
Psp124BI GAGCTC 2 cut(s) 777, 1173
Psp6I CCWGG 3 cut(s) 439, 1518, 1536
PspGI CCWGG 3 cut(s) 439, 1518, 1536
PspN4I GGNNCC 5 cut(s) 173, 533, 913, 1058, 1157
PspPI GGNCC 5 cut(s) 345, 506, 867, 1056, 1107
PstNI CAGNNNCTG 1 cut(s) 1939
PsuI RGATCY 4 cut(s) 228, 290, 1125, 1975
RsaI GTAC 7 cut(s) 42, 192, 827, 839, 1076, 1138, 1202
RsaNI GTAC 7 cut(s) 41, 191, 826, 838, 1075, 1137, 1201
RseI CAYNNNNRTG 2 cut(s) 617, 1872
SacI GAGCTC 2 cut(s) 777, 1173
SalI GTCGAC 1 cut(s) 364
SapI GCTCTTC 1 cut(s) 797
SaqAI TTAA 6 cut(s) 8, 155, 728, 1298, 1313, 1992
Sau3AI GATC 9 cut(s) 179, 228, 290, 384, 388, 621, 1125, 1944, 1975
Sau96I GGNCC 5 cut(s) 345, 506, 867, 1056, 1107
SchI GAGTC 3 cut(s) 132, 1019, 1750
ScrFI CCNGG 4 cut(s) 113, 441, 1520, 1538
SduI GDGCHC 5 cut(s) 544, 642, 777, 1173, 1666
SfaNI GCATC 4 cut(s) 1261, 1372, 1647, 1772
SfcI CTRYAG 1 cut(s) 1979
SfuI TTCGAA 1 cut(s) 356
SinI GGWCC 3 cut(s) 506, 867, 1107
SmiMI CAYNNNNRTG 2 cut(s) 617, 1872
SmlI CTYRAG 3 cut(s) 812, 1446, 1769
SmoI CTYRAG 3 cut(s) 812, 1446, 1769
SnaBI TACGTA 1 cut(s) 40
SphI GCATGC 1 cut(s) 1847
SsiI CCGC 7 cut(s) 635, 1028, 1159, 1344, 1761, 1832, 1955
SspI AATATT 1 cut(s) 396
SspMI CTAG 2 cut(s) 422, 1053
SstI GAGCTC 2 cut(s) 777, 1173
StyD4I CCNGG 4 cut(s) 111, 439, 1518, 1536
StyI CCWWGG 8 cut(s) 133, 175, 317, 421, 915, 1044, 1110, 1848
TaaI ACNGT 4 cut(s) 17, 35, 190, 1205
TaiI ACGT 2 cut(s) 42, 1073
TaqI TCGA 7 cut(s) 303, 309, 350, 356, 365, 387, 1149
TatI WGTACW 2 cut(s) 825, 1200
TfiI GAWTC 2 cut(s) 932, 968
Tru1I TTAA 6 cut(s) 8, 155, 728, 1298, 1313, 1992
Tru9I TTAA 6 cut(s) 8, 155, 728, 1298, 1313, 1992
TscAI CASTG 4 cut(s) 20, 129, 516, 607
TseFI GTSAC 2 cut(s) 11, 598
Tsp45I GTSAC 2 cut(s) 11, 598
TspDTI ATGAA 9 cut(s) 72, 488, 643, 733, 761, 811, 874, 1235, 1766
TspRI CASTG 4 cut(s) 20, 129, 516, 607
Van91I CCANNNNNTGG 1 cut(s) 99
VneI GTGCAC 1 cut(s) 1662
VpaK11BI GGWCC 3 cut(s) 506, 867, 1107
XapI RAATTY 2 cut(s) 116, 352
XceI RCATGY 3 cut(s) 163, 907, 1847
XcmI CCANNNNNNNNNTGG 1 cut(s) 260
XmaJI CCTAGG 1 cut(s) 421
XmiI GTMKAC 1 cut(s) 365
XmnI GAANNNNTTC 1 cut(s) 700
XspI CTAG 2 cut(s) 422, 1053
Zsp2I ATGCAT 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.