Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0000300

Physical Location & Seq

Genomic Coordinates Forward (+)

32286633 .. 32290887

Gene Structure 4255 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00310350.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1902 bp

ATGGCTTCCACGCCTGGAATTCTTACTGACTGGCCATGGACACCTCTTGGGAGCTTTAAGCATGGTATTTCCTTTGTGGACTACTTTGGTGAGACTGATGTATATGAGGTTTTGTTGTTGCAGTACGTGGTGTTAGCTCCTTGGGTGATTCACAGCACATACTCATATATGTTTGGAGAAGAAGGCACAGATCTATTTTACATCCTCGTATTTCCATTTCTGTTGTGGAGGATGCTCCACAACCAGATATGGATCTCACTTTCTCGCTATCAAACTGCCAAAGGCAAAGGAACAATCGTGGACAAGGGCCTCGAATTTGAACAAGTCGACAGAGAAAGAGATTGGGATGATCAAATCATATTCAATGGAATGCTGTTTTACATAGGCAGGTTTCTGGCCAGGTGCGTCCTGCCTAGGGCTCAAATTGACCTACCAATTTGGAGGGGAGATGGGTTGGTCATGACGATGCTGCTTCATGCTGGTCCGGTCGAGTATCTCTACTACTGGTTACACAGAGCACTTCACCACCATTTCCTCTACTCTCGCTACCATTCTCATCACCATTCCTCCATTGTCACTGAGCCAATTACTTCTGTGACTCACCCATTTGCGGAGCACATAACATATTTCATGCTATTCGCAATACCAATGGTGGCAACTCTGTTGATCGGAACAGCTTCCGTCTCATCCTATTTTGTTTATATTACTTATATCGACTTCATGAACAACTTGGGACACTGCAATTTCGAGTTCATTCCGAACTGGATCTTCACATTTTTTCCTCCTCTTAAGTACCACTCTTTGCATCACACACAATTTCGAACCAATTACTCCCTCTTCATGCCAGTCTATGACCATATATATGGTACCATGGACAAGTCTAGTGATACCCTACATGAATCTTCACTCAGGAAAGAGGAATCACCTGATGTGGTTCATCTAACCCATTTAACAACAACTAAATCCATCTACCGACTCCCACTGGCATTTGCTTCCTTGGCCTCTAATCCACACACTTCAACATGGTACTTATGGTTGTTGTGGCCGGTGACATTATGGTCCTTGATGCTAACTTGGATATTTGGCCGTTCATTTGTTATTGAGAGGCAGCGTTTTGATAAACACAGACTACAAACTTGGGTTATTCCAAAATATAGTTTGCAGTACTTGCTCTCATGGCAAAATGAAGCTATAACCAGAGCGATTGAGGATGCCATACTTGAAGCTGAGCAAATGGGTGTCAAAGTTATAAGTTTAGGTCTCTTTAATCAGGGTGAGAGGCTCAATAATAATGGTGGTATATATGTCCAGAGGAATCCACGGCTGAAAATCAAGGTGGTGGATGGGAGTAGCTTAGCTGTGGCTGTCATCCTTAACAGCATTCCGAAAGGAACAACCCAGGTTCTCCTTGCAGGCAACCTCACAAAGGTAGCTTATGCCCTTGCCTTTTCTTTGTGCCAGAGAGATATCCAGGTAGTTACATTACAGCAGGCTGAGTATTTGAAGCTCACCAAATCATTAAATGCTACAGAGGGTAAGGTGGTTCATGACAGAAGCTATGCTCAAAAGATTTGGTTGGTGGGAGATGGATTGAGTAAAAAAGAACAGTTGAGTGCACCAAAAGGAACAATTTTTGTTCCCTTCTCTCAATTTCCACCAAAACAGTTGCGCAGAGACTGCTTCTACCACTACACACCAGCAATGAAGATCCCCAAGTCTCTTGAGAATGTTTACTCTTGTGAGAACTGGTTGCCAAGGAGGGTGATGAGTGCGTGGCGTATAGCAGGAATAGTGCATGCATTGGAAGGTTGGAATGAGCACGAGTGTGGTCACACCATGTCCAGCATTGACAAAGTTTGGCAAGCAACTCTTCGACATGGCTTTCAGCCTCTTATCTCCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0006629 GO:0008150 GO:0008152 GO:0012505 GO:0016020 GO:0016491 GO:0031984 GO:0042175 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044238 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0055114 GO:0071704 GO:0098827

KEGG Pathways

Metabolic & Signaling

ko00073 ko01110 map00073 map01110

Pfam Domains

Protein Families

FA_hydroxylase Wax2_C

Protein Analysis

633

Amino Acids

73.38

Weight (kDa)

8.31

Isoelectric Point (pI)

31.21

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FA_hydroxylase	PF04116	161 - 290	1.6e-17	Fatty acid hydroxylase
CER1-like_C	PF12076	468 - 630	3.1e-74	CER1-like, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000300)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G02190 AT1G02190 AT1G02205 AT1G02205 AT1G02205 AT1G02205 AT1G02205 AT2G37700 AT2G37700 AT2G37700 AT2G37700
fragaria_vesca	FvH4_1g22160 FvH4_7g08560 FvH4_7g08560 FvH4_7g08560 FvH4_7g08570 FvH4_7g08570 FvH4_7g08590 FvH4_7g08590
malus_domestica	MD02G1226900.v1.1 MD07G1083700.v1.1 MD07G1083800.v1.1 MD07G1086200.v1.1 MD07G1086300.v1.1 MD07G1086700.v1.1 MD13G1075600.v1.1
prunus_persica	Prupe.2G112600_v2.0.a1 Prupe.2G112800_v2.0.a1 Prupe.2G113000_v2.0.a1 Prupe.2G113500_v2.0.a1 Prupe.2G113600_v2.0.a1
pyrus_communis	pycom02g19600 pycom02g19610 pycom07g06920 pycom07g06930
rosa_chinensis	RchiOBHm_Chr1g0343261 RchiOBHm_Chr1g0343301 RchiOBHm_Chr1g0343371 RchiOBHm_Chr1g0343431 RchiOBHm_Chr1g0343441 RchiOBHm_Chr1g0343521 RchiOBHm_Chr1g0343691 RchiOBHm_Chr1g0343791
rosa_laevigata	RLG00000028951 RLG00000028953 RLG00000028965 RLG00000028968 RLG00000028969 RLG00000028971 RLG00000028972 RLG00000028974 RLG00000029891
rosa_multiflora	Rmu_sc0000021.1_g000002 Rmu_sc0000335.1_g000046 Rmu_sc0000335.1_g000047 Rmu_sc0000335.1_g000058 Rmu_sc0000335.1_g000061 Rmu_sc0000335.1_g000106 Rmu_sc0000335.1_g000125 Rmu_sc0000544.1_g000010 Rmu_sc0003430.1_g000012 Rmu_sc0005796.1_g000004 Rmu_sc0028268.1_g000001 Rmu_ssc0000259.1_g000038
rosa_roxburghii	Rroxscaffold_2G00110090 Rroxscaffold_4G00310350 Rroxscaffold_4G00310610 Rroxscaffold_4G00310710 Rroxscaffold_4G00310740 Rroxscaffold_4G00310760 Rroxscaffold_4G00321110
rosa_rugosa	Rorug01G0080100 Rorug01G0080200 Rorug01G0166400 Rorug01G0166500 Rorug01G0166500 Rorug01G0166600 Rorug01G0166700 Rorug01G0166800 Rorug01G0168400 Rorug01G0168500 Rorug01G0168800 Rorug03G0241300 Rorug03G0241400 Rorug04G0001200 Rorug06G0031500 Rorug06G0073200 Rorug06G0264000
rosa_samantha	Rh1AG098100 Rh1AG181800 Rh1AG182100 Rh1AG182400 Rh1AG183000 Rh1AG183600 Rh1AG184300 Rh1AG185400 Rh1BG104000 Rh1BG150000 Rh1BG150400 Rh1BG152100 Rh1BG152300 Rh1CG168600 Rh1CG168900 Rh1CG169000 Rh1CG169700 Rh1CG170500 Rh1CG171200 Rh1DG182000 Rh1DG182300 Rh1DG184000 Rh1DG184200
rosa_wichuraiana	Rw0G012940 Rw1G007640 Rw1G007670 Rw1G011320 Rw1G015090 Rw1G015110 Rw1G015130 Rw1G015150 Rw1G015290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1250
AasI	GACNNNNNNGTC	1 cut(s)	1057
Acc16I	TGCGCA	1 cut(s)	1670
Acc36I	ACCTGC	1 cut(s)	378
Acc65I	GGTACC	1 cut(s)	866
AccB1I	GGYRCC	1 cut(s)	866
AccI	GTMKAC	1 cut(s)	327
AciI	CCGC	1 cut(s)	611
AclWI	GGATC	3 cut(s)	260, 773, 1702
AcoI	YGGCCR	4 cut(s)	32, 396, 1043, 1084
AcsI	RAATTY	2 cut(s)	18, 314
AfaI	GTAC	5 cut(s)	125, 794, 868, 1028, 1166
AfiI	CCNNNNNNNGG	3 cut(s)	415, 610, 1426
AflII	CTTAAG	1 cut(s)	788
AgsI	TTSAA	5 cut(s)	320, 364, 1020, 1223, 1504
AjnI	CCWGG	4 cut(s)	13, 398, 1398, 1470
AleI	CACNNNNGTG	1 cut(s)	1824
Alw21I	GWGCWC	4 cut(s)	520, 618, 1618, 1821
Alw26I	GTCTC	5 cut(s)	86, 688, 1265, 1668, 1722
Alw44I	GTGCAC	1 cut(s)	1614
AlwI	GGATC	3 cut(s)	260, 773, 1702
AlwNI	CAGNNNCTG	1 cut(s)	1677
AoxI	GGCC	6 cut(s)	32, 307, 396, 999, 1043, 1084
ApaLI	GTGCAC	1 cut(s)	1614
ApeKI	GCWGC	2 cut(s)	469, 1108
ApoI	RAATTY	2 cut(s)	18, 314
Asp700I	GAANNNNTTC	1 cut(s)	676
Asp718I	GGTACC	1 cut(s)	866
AspA2I	CCTAGG	1 cut(s)	413
AspLEI	GCGC	1 cut(s)	1671
AspS9I	GGNCC	3 cut(s)	307, 482, 1059
AsuII	TTCGAA	1 cut(s)	820
AvaII	GGWCC	2 cut(s)	482, 1059
AvrII	CCTAGG	1 cut(s)	413
BaeGI	GKGCMC	1 cut(s)	1618
BalI	TGGCCA	2 cut(s)	34, 398
BanI	GGYRCC	1 cut(s)	866
BanII	GRGCYC	1 cut(s)	421
BauI	CACGAG	1 cut(s)	1820
Bbv12I	GWGCWC	4 cut(s)	520, 618, 1618, 1821
BbvI	GCAGC	2 cut(s)	456, 1120
BccI	CCATC	4 cut(s)	443, 974, 1337, 1580
BceAI	ACGGC	2 cut(s)	1071, 1337
BciT130I	CCWGG	4 cut(s)	15, 400, 1400, 1472
BclI	TGATCA	1 cut(s)	349
BcoDI	GTCTC	5 cut(s)	86, 688, 1265, 1668, 1722
BfaI	CTAG	2 cut(s)	414, 882
BfmI	CTRYAG	1 cut(s)	1527
BfrI	CTTAAG	1 cut(s)	788
BfuAI	ACCTGC	1 cut(s)	378
BglII	AGATCT	1 cut(s)	190
BisI	GCNGC	2 cut(s)	470, 1109
BlnI	CCTAGG	1 cut(s)	413
BlpI	GCTNAGC	2 cut(s)	1227, 1354
BlsI	GCNGC	2 cut(s)	471, 1110
BmcAI	AGTACT	1 cut(s)	1166
Bme1390I	CCNGG	4 cut(s)	15, 400, 1400, 1472
Bme18I	GGWCC	2 cut(s)	482, 1059
BmgT120I	GGNCC	3 cut(s)	307, 482, 1059
BmiI	GGNNCC	1 cut(s)	868
BmrFI	CCNGG	4 cut(s)	15, 400, 1400, 1472
BmsI	GCATC	5 cut(s)	222, 456, 814, 1056, 1201
Bpu1102I	GCTNAGC	2 cut(s)	1227, 1354
Bpu14I	TTCGAA	1 cut(s)	820
BpuEI	CTTGAG	1 cut(s)	1742
BsaAI	YACGTR	1 cut(s)	127
BsaBI	GATNNNNATC	1 cut(s)	251
BsaI	GGTCTC	1 cut(s)	1265
BsaJI	CCNNGG	8 cut(s)	35, 140, 413, 870, 996, 1319, 1398, 1754
BsaWI	WCCGGW	1 cut(s)	484
BsaXI	ACNNNNNCTCC	2 cut(s)	551, 581
Bsc4I	CCNNNNNNNGG	3 cut(s)	415, 610, 1426
Bse118I	RCCGGY	1 cut(s)	1045
Bse1I	ACTGG	6 cut(s)	35, 509, 767, 845, 987, 1751
Bse3DI	GCAATG	1 cut(s)	1707
Bse8I	GATNNNNATC	1 cut(s)	251
BseBI	CCWGG	4 cut(s)	15, 400, 1400, 1472
BseDI	CCNNGG	8 cut(s)	35, 140, 413, 870, 996, 1319, 1398, 1754
BseGI	GGATG	7 cut(s)	201, 237, 352, 686, 1216, 1348, 1368
BseJI	GATNNNNATC	1 cut(s)	251
BseLI	CCNNNNNNNGG	3 cut(s)	415, 610, 1426
BseMI	GCAATG	1 cut(s)	1707
BseMII	CTCAG	4 cut(s)	570, 922, 1218, 1485
BseNI	ACTGG	6 cut(s)	35, 509, 767, 845, 987, 1751
BseRI	GAGGAG	1 cut(s)	774
BseSI	GKGCMC	1 cut(s)	1618
BseXI	GCAGC	2 cut(s)	456, 1120
Bsh1285I	CGRYCG	1 cut(s)	489
BshFI	GGCC	6 cut(s)	34, 309, 398, 1001, 1045, 1086
BshNI	GGYRCC	1 cut(s)	866
BsiEI	CGRYCG	1 cut(s)	489
BsiHKAI	GWGCWC	4 cut(s)	520, 618, 1618, 1821
BsiSI	CCGG	2 cut(s)	485, 1046
BslFI	GGGAC	1 cut(s)	747
BslI	CCNNNNNNNGG	3 cut(s)	415, 610, 1426
BsmAI	GTCTC	5 cut(s)	86, 688, 1265, 1668, 1722
BsmBI	CGTCTC	1 cut(s)	688
BsmFI	GGGAC	1 cut(s)	747
BsmI	GAATGC	2 cut(s)	375, 1380
BsnI	GGCC	6 cut(s)	34, 309, 398, 1001, 1045, 1086
Bso31I	GGTCTC	1 cut(s)	1265
Bsp119I	TTCGAA	1 cut(s)	820
Bsp1286I	GDGCHC	5 cut(s)	421, 520, 618, 1618, 1821
Bsp143I	GATC	6 cut(s)	190, 252, 349, 666, 765, 1707
Bsp1720I	GCTNAGC	2 cut(s)	1227, 1354
Bsp19I	CCATGG	2 cut(s)	35, 870
BspACI	CCGC	1 cut(s)	611
BspANI	GGCC	6 cut(s)	34, 309, 398, 1001, 1045, 1086
BspCNI	CTCAG	4 cut(s)	571, 921, 1219, 1486
BspHI	TCATGA	3 cut(s)	459, 720, 1546
BspLI	GGNNCC	1 cut(s)	868
BspMI	ACCTGC	1 cut(s)	378
BspPI	GGATC	3 cut(s)	260, 773, 1702
BspT104I	TTCGAA	1 cut(s)	820
BspT107I	GGYRCC	1 cut(s)	866
BspTI	CTTAAG	1 cut(s)	788
BspTNI	GGTCTC	1 cut(s)	1265
BsrDI	GCAATG	1 cut(s)	1707
BsrFI	RCCGGY	1 cut(s)	1045
BsrI	ACTGG	6 cut(s)	35, 509, 767, 845, 987, 1751
BssAI	RCCGGY	1 cut(s)	1045
BssECI	CCNNGG	8 cut(s)	35, 140, 413, 870, 996, 1319, 1398, 1754
BssMI	GATC	6 cut(s)	190, 252, 349, 666, 765, 1707
BssSI	CACGAG	1 cut(s)	1820
BssT1I	CCWWGG	6 cut(s)	35, 140, 413, 870, 996, 1754
Bst2BI	CACGAG	1 cut(s)	1820
Bst2UI	CCWGG	4 cut(s)	15, 400, 1400, 1472
Bst4CI	ACNGT	2 cut(s)	1608, 1665
Bst6I	CTCTTC	2 cut(s)	842, 1875
BstAFI	CTTAAG	1 cut(s)	788
BstAPI	GCANNNNNTGC	2 cut(s)	1168, 1677
BstBAI	YACGTR	1 cut(s)	127
BstBI	TTCGAA	1 cut(s)	820
BstC8I	GCNNGC	4 cut(s)	1414, 1491, 1797, 1863
BstDEI	CTNAG	5 cut(s)	579, 908, 1227, 1354, 1494
BstDSI	CCRYGG	3 cut(s)	35, 870, 1319
BstENI	CCTNNNNNAGG	1 cut(s)	1424
BstF5I	GGATG	7 cut(s)	201, 237, 352, 686, 1216, 1348, 1368
BstHHI	GCGC	1 cut(s)	1671
BstKTI	GATC	6 cut(s)	193, 255, 352, 669, 768, 1710
BstMAI	GTCTC	5 cut(s)	86, 688, 1265, 1668, 1722
BstMBI	GATC	6 cut(s)	190, 252, 349, 666, 765, 1707
BstMCI	CGRYCG	1 cut(s)	489
BstMWI	GCNNNNNNNGC	4 cut(s)	998, 1168, 1177, 1677
BstNI	CCWGG	4 cut(s)	15, 400, 1400, 1472
BstNSI	RCATGY	1 cut(s)	1799
BstSCI	CCNGG	4 cut(s)	13, 398, 1398, 1470
BstSFI	CTRYAG	1 cut(s)	1527
BstSLI	GKGCMC	1 cut(s)	1618
BstV1I	GCAGC	2 cut(s)	456, 1120
BstX2I	RGATCY	4 cut(s)	190, 252, 765, 1707
BstXI	CCANNNNNNTGG	1 cut(s)	863
BstYI	RGATCY	4 cut(s)	190, 252, 765, 1707
BsuRI	GGCC	6 cut(s)	34, 309, 398, 1001, 1045, 1086
BtgI	CCRYGG	3 cut(s)	35, 870, 1319
BtsCI	GGATG	7 cut(s)	201, 237, 352, 686, 1216, 1348, 1368
BtsI	GCAGTG	1 cut(s)	736
BtsIMutI	CAGTG	3 cut(s)	576, 736, 980
BveI	ACCTGC	1 cut(s)	378
Cac8I	GCNNGC	4 cut(s)	1414, 1491, 1797, 1863
CaiI	CAGNNNCTG	1 cut(s)	1677
CciI	TCATGA	3 cut(s)	459, 720, 1546
CfoI	GCGC	1 cut(s)	1671
Cfr10I	RCCGGY	1 cut(s)	1045
Cfr13I	GGNCC	3 cut(s)	307, 482, 1059
CseI	GACGC	1 cut(s)	394
Csp6I	GTAC	5 cut(s)	124, 793, 867, 1027, 1165
CviQI	GTAC	5 cut(s)	124, 793, 867, 1027, 1165
DdeI	CTNAG	5 cut(s)	579, 908, 1227, 1354, 1494
DpnI	GATC	6 cut(s)	192, 254, 351, 668, 767, 1709
DpnII	GATC	6 cut(s)	190, 252, 349, 666, 765, 1707
DrdI	GACNNNNNNGTC	1 cut(s)	1057
DseDI	GACNNNNNNGTC	1 cut(s)	1057
EaeI	YGGCCR	4 cut(s)	32, 396, 1043, 1084
Eam1104I	CTCTTC	2 cut(s)	842, 1875
EarI	CTCTTC	2 cut(s)	842, 1875
Eco130I	CCWWGG	6 cut(s)	35, 140, 413, 870, 996, 1754
Eco24I	GRGCYC	1 cut(s)	421
Eco31I	GGTCTC	1 cut(s)	1265
Eco32I	GATATC	1 cut(s)	1468
Eco47I	GGWCC	2 cut(s)	482, 1059
EcoNI	CCTNNNNNAGG	1 cut(s)	1424
EcoO109I	RGGNCCY	1 cut(s)	307
EcoRI	GAATTC	1 cut(s)	18
EcoRII	CCWGG	4 cut(s)	13, 398, 1398, 1470
EcoRV	GATATC	1 cut(s)	1468
EcoT14I	CCWWGG	6 cut(s)	35, 140, 413, 870, 996, 1754
EcoT22I	ATGCAT	1 cut(s)	1801
EcoT38I	GRGCYC	1 cut(s)	421
ErhI	CCWWGG	6 cut(s)	35, 140, 413, 870, 996, 1754
Esp3I	CGTCTC	1 cut(s)	688
FalI	AAGNNNNNCTT	2 cut(s)	1854, 1886
FaqI	GGGAC	1 cut(s)	747
FbaI	TGATCA	1 cut(s)	349
FblI	GTMKAC	1 cut(s)	327
Fnu4HI	GCNGC	2 cut(s)	470, 1109
FokI	GGATG	7 cut(s)	188, 244, 359, 673, 1223, 1355, 1355
FriOI	GRGCYC	1 cut(s)	421
Fsp4HI	GCNGC	2 cut(s)	470, 1109
FspBI	CTAG	2 cut(s)	414, 882
FspI	TGCGCA	1 cut(s)	1670
GlaI	GCGC	1 cut(s)	1670
GluI	GCNGC	2 cut(s)	470, 1109
HaeIII	GGCC	6 cut(s)	34, 309, 398, 1001, 1045, 1086
HapII	CCGG	2 cut(s)	485, 1046
HgaI	GACGC	1 cut(s)	394
HhaI	GCGC	1 cut(s)	1671
Hin6I	GCGC	1 cut(s)	1669
HinP1I	GCGC	1 cut(s)	1669
HincII	GTYRAC	1 cut(s)	328
HindII	GTYRAC	1 cut(s)	328
HinfI	GANTC	6 cut(s)	148, 598, 899, 920, 975, 1315
HpaII	CCGG	2 cut(s)	485, 1046
Hpy166II	GTNNAC	5 cut(s)	79, 301, 328, 1616, 1732
Hpy188I	TCNGA	3 cut(s)	671, 759, 1386
Hpy188III	TCNNGA	6 cut(s)	460, 721, 910, 1309, 1547, 1721
Hpy8I	GTNNAC	5 cut(s)	79, 301, 328, 1616, 1732
HpyAV	CCTTC	3 cut(s)	176, 1651, 1799
HpyCH4III	ACNGT	2 cut(s)	1608, 1665
HpyCH4IV	ACGT	1 cut(s)	126
HpyCH4V	TGCA	8 cut(s)	121, 741, 805, 1162, 1412, 1616, 1795, 1799
HpyF10VI	GCNNNNNNNGC	4 cut(s)	998, 1168, 1177, 1677
HpyF3I	CTNAG	5 cut(s)	579, 908, 1227, 1354, 1494
HpySE526I	ACGT	1 cut(s)	126
HspAI	GCGC	1 cut(s)	1669
KpnI	GGTACC	1 cut(s)	870
Ksp22I	TGATCA	1 cut(s)	349
Kzo9I	GATC	6 cut(s)	190, 252, 349, 666, 765, 1707
LmnI	GCTCC	4 cut(s)	51, 142, 240, 613
Lsp1109I	GCAGC	2 cut(s)	456, 1120
LweI	GCATC	5 cut(s)	222, 456, 814, 1056, 1201
MaeI	CTAG	2 cut(s)	414, 882
MaeII	ACGT	1 cut(s)	126
MaeIII	GTNAC	6 cut(s)	507, 574, 595, 1048, 1477, 1829
MalI	GATC	6 cut(s)	192, 254, 351, 668, 767, 1709
MboI	GATC	6 cut(s)	190, 252, 349, 666, 765, 1707
MboII	GAAGA	6 cut(s)	191, 760, 829, 894, 1717, 1862
MflI	RGATCY	4 cut(s)	190, 252, 765, 1707
MhlI	GDGCHC	5 cut(s)	421, 520, 618, 1618, 1821
MlsI	TGGCCA	2 cut(s)	34, 398
MluNI	TGGCCA	2 cut(s)	34, 398
MlyI	GAGTC	2 cut(s)	592, 969
MmeI	TCCRAC	1 cut(s)	1790
Mox20I	TGGCCA	2 cut(s)	34, 398
Mph1103I	ATGCAT	1 cut(s)	1801
MroXI	GAANNNNTTC	1 cut(s)	676
MscI	TGGCCA	2 cut(s)	34, 398
MseI	TTAA	6 cut(s)	57, 789, 950, 1266, 1374, 1520
MslI	CAYNNNNRTG	3 cut(s)	464, 861, 1824
Msp20I	TGGCCA	2 cut(s)	34, 398
MspCI	CTTAAG	1 cut(s)	788
MspI	CCGG	2 cut(s)	485, 1046
MspR9I	CCNGG	4 cut(s)	15, 400, 1400, 1472
Mva1269I	GAATGC	2 cut(s)	375, 1380
MvaI	CCWGG	4 cut(s)	15, 400, 1400, 1472
MwoI	GCNNNNNNNGC	4 cut(s)	998, 1168, 1177, 1677
NcoI	CCATGG	2 cut(s)	35, 870
NdeII	GATC	6 cut(s)	190, 252, 349, 666, 765, 1707
NlaIV	GGNNCC	1 cut(s)	868
NmuCI	GTSAC	4 cut(s)	574, 595, 1048, 1829
NsbI	TGCGCA	1 cut(s)	1670
NsiI	ATGCAT	1 cut(s)	1801
NspI	RCATGY	1 cut(s)	1799
NspV	TTCGAA	1 cut(s)	820
OliI	CACNNNNGTG	1 cut(s)	1824
PaeI	GCATGC	1 cut(s)	1799
PagI	TCATGA	3 cut(s)	459, 720, 1546
PctI	GAATGC	2 cut(s)	375, 1380
PdmI	GAANNNNTTC	1 cut(s)	676
PfeI	GAWTC	4 cut(s)	148, 899, 920, 1315
PkrI	GCNGC	2 cut(s)	471, 1110
PleI	GAGTC	2 cut(s)	592, 969
PpsI	GAGTC	2 cut(s)	592, 969
Ppu21I	YACGTR	1 cut(s)	127
PsiI	TTATAA	1 cut(s)	1250
Psp6I	CCWGG	4 cut(s)	13, 398, 1398, 1470
PspGI	CCWGG	4 cut(s)	13, 398, 1398, 1470
PspN4I	GGNNCC	1 cut(s)	868
PspPI	GGNCC	3 cut(s)	307, 482, 1059
PstNI	CAGNNNCTG	1 cut(s)	1677
PsuI	RGATCY	4 cut(s)	190, 252, 765, 1707
RsaI	GTAC	5 cut(s)	125, 794, 868, 1028, 1166
RsaNI	GTAC	5 cut(s)	124, 793, 867, 1027, 1165
RseI	CAYNNNNRTG	3 cut(s)	464, 861, 1824
SalI	GTCGAC	1 cut(s)	326
SaqAI	TTAA	6 cut(s)	57, 789, 950, 1266, 1374, 1520
SatI	GCNGC	2 cut(s)	470, 1109
Sau3AI	GATC	6 cut(s)	190, 252, 349, 666, 765, 1707
Sau96I	GGNCC	3 cut(s)	307, 482, 1059
ScaI	AGTACT	1 cut(s)	1166
SchI	GAGTC	2 cut(s)	592, 969
ScrFI	CCNGG	4 cut(s)	15, 400, 1400, 1472
SduI	GDGCHC	5 cut(s)	421, 520, 618, 1618, 1821
SfaNI	GCATC	5 cut(s)	222, 456, 814, 1056, 1201
SfcI	CTRYAG	1 cut(s)	1527
SfuI	TTCGAA	1 cut(s)	820
SinI	GGWCC	2 cut(s)	482, 1059
SmiMI	CAYNNNNRTG	3 cut(s)	464, 861, 1824
SmlI	CTYRAG	2 cut(s)	788, 1721
SmoI	CTYRAG	2 cut(s)	788, 1721
SphI	GCATGC	1 cut(s)	1799
SsiI	CCGC	1 cut(s)	611
SspMI	CTAG	2 cut(s)	414, 882
StyD4I	CCNGG	4 cut(s)	13, 398, 1398, 1470
StyI	CCWWGG	6 cut(s)	35, 140, 413, 870, 996, 1754
TaaI	ACNGT	2 cut(s)	1608, 1665
TaiI	ACGT	1 cut(s)	129
TaqI	TCGA	7 cut(s)	312, 327, 489, 714, 747, 820, 1873
TatI	WGTACW	1 cut(s)	1164
TfiI	GAWTC	4 cut(s)	148, 899, 920, 1315
Tru1I	TTAA	6 cut(s)	57, 789, 950, 1266, 1374, 1520
Tru9I	TTAA	6 cut(s)	57, 789, 950, 1266, 1374, 1520
TscAI	CASTG	3 cut(s)	583, 743, 987
TseFI	GTSAC	4 cut(s)	574, 595, 1048, 1829
TseI	GCWGC	2 cut(s)	469, 1108
Tsp45I	GTSAC	4 cut(s)	574, 595, 1048, 1829
TspGWI	ACGGA	1 cut(s)	670
TspRI	CASTG	3 cut(s)	583, 743, 987
Vha464I	CTTAAG	1 cut(s)	788
VneI	GTGCAC	1 cut(s)	1614
VpaK11BI	GGWCC	2 cut(s)	482, 1059
XagI	CCTNNNNNAGG	1 cut(s)	1424
XapI	RAATTY	2 cut(s)	18, 314
XceI	RCATGY	1 cut(s)	1799
XcmI	CCANNNNNNNNNTGG	1 cut(s)	222
XmaJI	CCTAGG	1 cut(s)	413
XmiI	GTMKAC	1 cut(s)	327
XmnI	GAANNNNTTC	1 cut(s)	676
XspI	CTAG	2 cut(s)	414, 882
ZrmI	AGTACT	1 cut(s)	1166
Zsp2I	ATGCAT	1 cut(s)	1801

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.