Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1C

Orthogroup ID

OG0000300

Physical Location & Seq

Genomic Coordinates Reverse (-)

37407969 .. 37419008

Gene Structure 11040 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1CG170500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1836 bp

ATGGCTTCCACACCTGGAATTCTTACTAACTGGCCATGGACACCTCTTGGGAGCTTTAAGTACTTGGTGTTAGCTCCTTGGGTGATTCACAGCACCTACTTGTTTATGTTTGGAGAAGAAGGCACAGATCTATTTTACATCCTCGTATTTCCATTTCTGTTGTGGAGGATGCTCCACAATCAGATATGGATCTCACTTTCTCGCTATCAAACTGCCAAAGGCACAGGAACAATCATTGACAAGGGCCTCGAATTCGAACAAGTTGACAGAGAAAGAGATTGGGATGATCAAATCATATTCAATGGAATGTTGTTTTACATAGGCAGGTTTCTGGCCAGGTGCGTCCTGCCTAGGGCTCAAACTGACCTACCAATTTGGAGGGGAGATGGGTTGGTCATGACGATGCTGCTTCATGCTGGTCCGGTCGAGTACCTCTACTACTGGTTGCACAGAGCACTTCACCACCATTTTCTCTACTCTCGCTACCATTCTCATCACCATTCTTCCATTGTCACTGAGCCAATTACTTTTGTGGCTCACCCATTTGCAGAGCACATAACATATTTCATGCTCTTCGCAATACCAATGGTGGCAACTCTGTTGATCGGAACAGCTTCCATCACATCCTATTTTGTTTATATTACTTATATCGACCTCATGAACAACTTGGGACACTGCAACTTCGAGTTCATTCCGAACTGGATCTTCTGTCTTTTTCCTCCTCTTAAGTATCTCATTTATACTCCCTCGTACCACTCTTTGCATCACACTCAATTTCGTACCAATTACTCCCTCTTCATGCCAATCTATGACTACACATATGGTACCATGGACACGTCTAGTGATACTCTACATGAATCTTCACTCAGGAAAGAGGAATCACCTGATGTGGTTCATCTAACCCATTTAACAACAACTAAGTCCATCTACCGACTCCCACTGGCATTTGCTTCCTCGGCCTCTAATCCACACACTTCAACATGGTACTTATGGTTGTTGTGGCCTGTAACATTAGGGTCTATGATGCTAACTCGGATATTTGACCGTTCGTTTGTTATTGAGAGACAGTGTTTTGATAAACAAAGACTACAAACTTGGGTTATTCCAAAATACAGTTTGCAGTACTTGGTCTCATGGCAAAATGAAGCTATAAACAGAGCGATTGAGGATGCCATACTTGAAGCTGAGAAAAGGGGTGTCAAAGTTATAAGTTTAGGTCTCTTTAATCAGGGTGAGGGGCTCAATAGTTATGGTGGTATATATGTCCAGAGGAATCGGCCACGGCTGAAAATCAAGGTGGTGGATGGGAGTAGCTTAGCTGTGGCTGTCATCCTTAACAGCATTCCAAAAGGCGCTACCCAGGTTCTCCTGACAGGAAACCTCACAAAGGTTGCTTATGCCCTTGCCTTTTCTTTGTGCCAGAGAGATATCCAGGTAGTTACATTACAGCTGGCTGAGTATTTGAAGCTCACCAAATCAGTAAATGCTACAGAGGGTAAGGTGGTTCATGACAGAAGCTATGCTCAAAAGTTGAGTGCACCCAACGGAACAATATTTGTTCCGTTCTCTCAATTCCCGCCAAAAAAGTTGCGAAAAGACTGTTACTATCACTGTACTCCAGCCATGAAGATCCCCAAGTCTCTTGAGAATGTTTACTCTTGTGAGAACTGGTTGCCAAGGAGGGTGATGAGTGCGTGGCGTATAGCTGGGATAGTGCATGCATTGGAAGGTTTGAATGATCATGAGTGTGGTTATACCATGTCCGATATTGACAAAGTTTGGCAAGCTACTCTTCGACATGGCTTTCAGCCTCTCATCCCCACCACTACTACTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0006629 GO:0008150 GO:0008152 GO:0012505 GO:0016020 GO:0016491 GO:0031984 GO:0042175 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044238 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0055114 GO:0071704 GO:0098827

KEGG Pathways

Metabolic & Signaling

ko00073 ko01110 map00073 map01110

Pfam Domains

Protein Families

FA_hydroxylase Wax2_C

Protein Analysis

611

Amino Acids

70.53

Weight (kDa)

8.63

Isoelectric Point (pI)

28.32

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FA_hydroxylase	PF04116	140 - 276	5.1e-20	Fatty acid hydroxylase
CER1-like_C	PF12076	455 - 604	7.6e-58	CER1-like, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000300)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G02190 AT1G02190 AT1G02205 AT1G02205 AT1G02205 AT1G02205 AT1G02205 AT2G37700 AT2G37700 AT2G37700 AT2G37700
fragaria_vesca	FvH4_1g22160 FvH4_7g08560 FvH4_7g08560 FvH4_7g08560 FvH4_7g08570 FvH4_7g08570 FvH4_7g08590 FvH4_7g08590
malus_domestica	MD02G1226900.v1.1 MD07G1083700.v1.1 MD07G1083800.v1.1 MD07G1086200.v1.1 MD07G1086300.v1.1 MD07G1086700.v1.1 MD13G1075600.v1.1
prunus_persica	Prupe.2G112600_v2.0.a1 Prupe.2G112800_v2.0.a1 Prupe.2G113000_v2.0.a1 Prupe.2G113500_v2.0.a1 Prupe.2G113600_v2.0.a1
pyrus_communis	pycom02g19600 pycom02g19610 pycom07g06920 pycom07g06930
rosa_chinensis	RchiOBHm_Chr1g0343261 RchiOBHm_Chr1g0343301 RchiOBHm_Chr1g0343371 RchiOBHm_Chr1g0343431 RchiOBHm_Chr1g0343441 RchiOBHm_Chr1g0343521 RchiOBHm_Chr1g0343691 RchiOBHm_Chr1g0343791
rosa_laevigata	RLG00000028951 RLG00000028953 RLG00000028965 RLG00000028968 RLG00000028969 RLG00000028971 RLG00000028972 RLG00000028974 RLG00000029891
rosa_multiflora	Rmu_sc0000021.1_g000002 Rmu_sc0000335.1_g000046 Rmu_sc0000335.1_g000047 Rmu_sc0000335.1_g000058 Rmu_sc0000335.1_g000061 Rmu_sc0000335.1_g000106 Rmu_sc0000335.1_g000125 Rmu_sc0000544.1_g000010 Rmu_sc0003430.1_g000012 Rmu_sc0005796.1_g000004 Rmu_sc0028268.1_g000001 Rmu_ssc0000259.1_g000038
rosa_roxburghii	Rroxscaffold_2G00110090 Rroxscaffold_4G00310350 Rroxscaffold_4G00310610 Rroxscaffold_4G00310710 Rroxscaffold_4G00310740 Rroxscaffold_4G00310760 Rroxscaffold_4G00321110
rosa_rugosa	Rorug01G0080100 Rorug01G0080200 Rorug01G0166400 Rorug01G0166500 Rorug01G0166500 Rorug01G0166600 Rorug01G0166700 Rorug01G0166800 Rorug01G0168400 Rorug01G0168500 Rorug01G0168800 Rorug03G0241300 Rorug03G0241400 Rorug04G0001200 Rorug06G0031500 Rorug06G0073200 Rorug06G0264000
rosa_samantha	Rh1AG098100 Rh1AG181800 Rh1AG182100 Rh1AG182400 Rh1AG183000 Rh1AG183600 Rh1AG184300 Rh1AG185400 Rh1BG104000 Rh1BG150000 Rh1BG150400 Rh1BG152100 Rh1BG152300 Rh1CG168600 Rh1CG168900 Rh1CG169000 Rh1CG169700 Rh1CG170500 Rh1CG171200 Rh1DG182000 Rh1DG182300 Rh1DG184000 Rh1DG184200
rosa_wichuraiana	Rw0G012940 Rw1G007640 Rw1G007670 Rw1G011320 Rw1G015090 Rw1G015110 Rw1G015130 Rw1G015150 Rw1G015290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1208
Acc36I	ACCTGC	1 cut(s)	315
Acc65I	GGTACC	1 cut(s)	824
AccB1I	GGYRCC	1 cut(s)	824
AciI	CCGC	1 cut(s)	1577
AclWI	GGATC	3 cut(s)	197, 710, 1624
AcoI	YGGCCR	3 cut(s)	32, 333, 1277
AcsI	RAATTY	2 cut(s)	18, 251
AfaI	GTAC	8 cut(s)	62, 431, 752, 781, 826, 986, 1124, 1615
AfiI	CCNNNNNNNGG	2 cut(s)	352, 1387
AflII	CTTAAG	1 cut(s)	725
AflIII	ACRYGT	1 cut(s)	834
AgsI	TTSAA	5 cut(s)	301, 978, 1181, 1465, 1735
AjiI	CACGTC	1 cut(s)	837
AjnI	CCWGG	4 cut(s)	13, 335, 1359, 1431
Alw21I	GWGCWC	3 cut(s)	457, 555, 1540
Alw26I	GTCTC	4 cut(s)	1057, 1135, 1223, 1644
Alw44I	GTGCAC	1 cut(s)	1536
AlwI	GGATC	3 cut(s)	197, 710, 1624
AoxI	GGCC	6 cut(s)	32, 244, 333, 957, 1001, 1277
ApaLI	GTGCAC	1 cut(s)	1536
ApeKI	GCWGC	1 cut(s)	406
ApoI	RAATTY	2 cut(s)	18, 251
ArsI	GACNNNNNNTTYG	2 cut(s)	1034, 1066
Asp700I	GAANNNNTTC	1 cut(s)	613
Asp718I	GGTACC	1 cut(s)	824
AspA2I	CCTAGG	1 cut(s)	350
AspLEI	GCGC	1 cut(s)	1355
AspS9I	GGNCC	2 cut(s)	244, 419
AsuHPI	GGTGA	8 cut(s)	94, 452, 488, 530, 873, 1244, 1462, 1696
AsuII	TTCGAA	1 cut(s)	255
AvaII	GGWCC	1 cut(s)	419
AvrII	CCTAGG	1 cut(s)	350
BaeGI	GKGCMC	1 cut(s)	1540
BalI	TGGCCA	2 cut(s)	34, 335
BanI	GGYRCC	1 cut(s)	824
BanII	GRGCYC	2 cut(s)	358, 1242
Bbv12I	GWGCWC	3 cut(s)	457, 555, 1540
BbvI	GCAGC	1 cut(s)	393
BccI	CCATC	4 cut(s)	380, 626, 932, 1298
BceAI	ACGGC	1 cut(s)	1298
BciT130I	CCWGG	4 cut(s)	15, 337, 1361, 1433
BclI	TGATCA	2 cut(s)	286, 1738
BcoDI	GTCTC	4 cut(s)	1057, 1135, 1223, 1644
BfaI	CTAG	2 cut(s)	351, 840
BfmI	CTRYAG	1 cut(s)	1488
BfoI	RGCGCY	1 cut(s)	1356
BfrI	CTTAAG	1 cut(s)	725
BfuAI	ACCTGC	1 cut(s)	315
BglII	AGATCT	1 cut(s)	127
BisI	GCNGC	1 cut(s)	407
BlnI	CCTAGG	1 cut(s)	350
BlpI	GCTNAGC	1 cut(s)	1315
BlsI	GCNGC	1 cut(s)	408
BmcAI	AGTACT	2 cut(s)	62, 1124
Bme1390I	CCNGG	4 cut(s)	15, 337, 1361, 1433
Bme18I	GGWCC	1 cut(s)	419
BmgBI	CACGTC	1 cut(s)	837
BmgT120I	GGNCC	2 cut(s)	244, 419
BmiI	GGNNCC	1 cut(s)	826
BmrFI	CCNGG	4 cut(s)	15, 337, 1361, 1433
BmsI	GCATC	5 cut(s)	159, 393, 772, 1014, 1159
BpmI	CTGGAG	1 cut(s)	1602
Bpu1102I	GCTNAGC	1 cut(s)	1315
Bpu14I	TTCGAA	1 cut(s)	255
BpuEI	CTTGAG	1 cut(s)	1664
BsaBI	GATNNNNATC	1 cut(s)	188
BsaI	GGTCTC	2 cut(s)	1135, 1223
BsaJI	CCNNGG	8 cut(s)	35, 77, 350, 828, 954, 1280, 1359, 1676
BsaWI	WCCGGW	1 cut(s)	421
Bsc4I	CCNNNNNNNGG	2 cut(s)	352, 1387
Bse1I	ACTGG	5 cut(s)	35, 446, 704, 945, 1673
Bse8I	GATNNNNATC	1 cut(s)	188
BseBI	CCWGG	4 cut(s)	15, 337, 1361, 1433
BseDI	CCNNGG	8 cut(s)	35, 77, 350, 828, 954, 1280, 1359, 1676
BseGI	GGATG	8 cut(s)	138, 174, 289, 623, 1174, 1309, 1329, 1815
BseJI	GATNNNNATC	1 cut(s)	188
BseLI	CCNNNNNNNGG	2 cut(s)	352, 1387
BseMII	CTCAG	4 cut(s)	507, 880, 1176, 1446
BseNI	ACTGG	5 cut(s)	35, 446, 704, 945, 1673
BseRI	GAGGAG	1 cut(s)	711
BseSI	GKGCMC	1 cut(s)	1540
BseXI	GCAGC	1 cut(s)	393
BseYI	CCCAGC	1 cut(s)	1706
Bsh1285I	CGRYCG	1 cut(s)	426
BshFI	GGCC	6 cut(s)	34, 246, 335, 959, 1003, 1279
BshNI	GGYRCC	1 cut(s)	824
BsiEI	CGRYCG	1 cut(s)	426
BsiHKAI	GWGCWC	3 cut(s)	457, 555, 1540
BsiSI	CCGG	1 cut(s)	422
BslFI	GGGAC	1 cut(s)	684
BslI	CCNNNNNNNGG	2 cut(s)	352, 1387
BsmAI	GTCTC	4 cut(s)	1057, 1135, 1223, 1644
BsmFI	GGGAC	1 cut(s)	684
BsmI	GAATGC	1 cut(s)	1341
BsnI	GGCC	6 cut(s)	34, 246, 335, 959, 1003, 1279
Bso31I	GGTCTC	2 cut(s)	1135, 1223
Bsp119I	TTCGAA	1 cut(s)	255
Bsp1286I	GDGCHC	5 cut(s)	358, 457, 555, 1242, 1540
Bsp143I	GATC	7 cut(s)	127, 189, 286, 603, 702, 1629, 1738
Bsp1720I	GCTNAGC	1 cut(s)	1315
Bsp19I	CCATGG	2 cut(s)	35, 828
BspACI	CCGC	1 cut(s)	1577
BspANI	GGCC	6 cut(s)	34, 246, 335, 959, 1003, 1279
BspCNI	CTCAG	4 cut(s)	508, 879, 1177, 1447
BspHI	TCATGA	4 cut(s)	396, 657, 1507, 1741
BspLI	GGNNCC	1 cut(s)	826
BspMI	ACCTGC	1 cut(s)	315
BspPI	GGATC	3 cut(s)	197, 710, 1624
BspQI	GCTCTTC	1 cut(s)	578
BspT104I	TTCGAA	1 cut(s)	255
BspT107I	GGYRCC	1 cut(s)	824
BspTI	CTTAAG	1 cut(s)	725
BspTNI	GGTCTC	2 cut(s)	1135, 1223
BsrI	ACTGG	5 cut(s)	35, 446, 704, 945, 1673
BssECI	CCNNGG	8 cut(s)	35, 77, 350, 828, 954, 1280, 1359, 1676
BssMI	GATC	7 cut(s)	127, 189, 286, 603, 702, 1629, 1738
BssT1I	CCWWGG	5 cut(s)	35, 77, 350, 828, 1676
Bst2UI	CCWGG	4 cut(s)	15, 337, 1361, 1433
Bst4CI	ACNGT	5 cut(s)	1046, 1068, 1115, 1601, 1613
Bst6I	CTCTTC	3 cut(s)	578, 800, 1797
BstAFI	CTTAAG	1 cut(s)	725
BstBI	TTCGAA	1 cut(s)	255
BstC8I	GCNNGC	3 cut(s)	1452, 1719, 1785
BstDEI	CTNAG	6 cut(s)	516, 866, 918, 1185, 1315, 1455
BstDSI	CCRYGG	3 cut(s)	35, 828, 1280
BstENI	CCTNNNNNAGG	1 cut(s)	1385
BstF5I	GGATG	8 cut(s)	138, 174, 289, 623, 1174, 1309, 1329, 1815
BstH2I	RGCGCY	1 cut(s)	1356
BstHHI	GCGC	1 cut(s)	1355
BstKTI	GATC	7 cut(s)	130, 192, 289, 606, 705, 1632, 1741
BstMAI	GTCTC	4 cut(s)	1057, 1135, 1223, 1644
BstMBI	GATC	7 cut(s)	127, 189, 286, 603, 702, 1629, 1738
BstMCI	CGRYCG	1 cut(s)	426
BstMWI	GCNNNNNNNGC	1 cut(s)	956
BstNI	CCWGG	4 cut(s)	15, 337, 1361, 1433
BstNSI	RCATGY	1 cut(s)	1721
BstSCI	CCNGG	4 cut(s)	13, 335, 1359, 1431
BstSFI	CTRYAG	1 cut(s)	1488
BstSLI	GKGCMC	1 cut(s)	1540
BstV1I	GCAGC	1 cut(s)	393
BstX2I	RGATCY	4 cut(s)	127, 189, 702, 1629
BstYI	RGATCY	4 cut(s)	127, 189, 702, 1629
BsuRI	GGCC	6 cut(s)	34, 246, 335, 959, 1003, 1279
BtgI	CCRYGG	3 cut(s)	35, 828, 1280
BtrI	CACGTC	1 cut(s)	837
BtsCI	GGATG	8 cut(s)	138, 174, 289, 623, 1174, 1309, 1329, 1815
BtsI	GCAGTG	1 cut(s)	673
BtsIMutI	CAGTG	5 cut(s)	513, 673, 938, 1073, 1609
BveI	ACCTGC	1 cut(s)	315
Cac8I	GCNNGC	3 cut(s)	1452, 1719, 1785
CciI	TCATGA	4 cut(s)	396, 657, 1507, 1741
CfoI	GCGC	1 cut(s)	1355
Cfr13I	GGNCC	2 cut(s)	244, 419
CseI	GACGC	1 cut(s)	331
Csp6I	GTAC	8 cut(s)	61, 430, 751, 780, 825, 985, 1123, 1614
CviQI	GTAC	8 cut(s)	61, 430, 751, 780, 825, 985, 1123, 1614
DdeI	CTNAG	6 cut(s)	516, 866, 918, 1185, 1315, 1455
DpnI	GATC	7 cut(s)	129, 191, 288, 605, 704, 1631, 1740
DpnII	GATC	7 cut(s)	127, 189, 286, 603, 702, 1629, 1738
EaeI	YGGCCR	3 cut(s)	32, 333, 1277
Eam1104I	CTCTTC	3 cut(s)	578, 800, 1797
EarI	CTCTTC	3 cut(s)	578, 800, 1797
Eco130I	CCWWGG	5 cut(s)	35, 77, 350, 828, 1676
Eco24I	GRGCYC	2 cut(s)	358, 1242
Eco31I	GGTCTC	2 cut(s)	1135, 1223
Eco32I	GATATC	1 cut(s)	1429
Eco47I	GGWCC	1 cut(s)	419
EcoNI	CCTNNNNNAGG	1 cut(s)	1385
EcoO109I	RGGNCCY	1 cut(s)	244
EcoRI	GAATTC	2 cut(s)	18, 251
EcoRII	CCWGG	4 cut(s)	13, 335, 1359, 1431
EcoRV	GATATC	1 cut(s)	1429
EcoT14I	CCWWGG	5 cut(s)	35, 77, 350, 828, 1676
EcoT22I	ATGCAT	1 cut(s)	1723
EcoT38I	GRGCYC	2 cut(s)	358, 1242
ErhI	CCWWGG	5 cut(s)	35, 77, 350, 828, 1676
FalI	AAGNNNNNCTT	2 cut(s)	1776, 1808
FaqI	GGGAC	1 cut(s)	684
FauI	CCCGC	1 cut(s)	1584
FauNDI	CATATG	1 cut(s)	820
FbaI	TGATCA	2 cut(s)	286, 1738
Fnu4HI	GCNGC	1 cut(s)	407
FokI	GGATG	8 cut(s)	125, 181, 296, 610, 1181, 1316, 1316, 1802
FriOI	GRGCYC	2 cut(s)	358, 1242
Fsp4HI	GCNGC	1 cut(s)	407
FspBI	CTAG	2 cut(s)	351, 840
GlaI	GCGC	1 cut(s)	1354
GluI	GCNGC	1 cut(s)	407
GsaI	CCCAGC	1 cut(s)	1710
GsuI	CTGGAG	1 cut(s)	1602
HaeII	RGCGCY	1 cut(s)	1356
HaeIII	GGCC	6 cut(s)	34, 246, 335, 959, 1003, 1279
HapII	CCGG	1 cut(s)	422
HgaI	GACGC	1 cut(s)	331
HhaI	GCGC	1 cut(s)	1355
Hin6I	GCGC	1 cut(s)	1353
HinP1I	GCGC	1 cut(s)	1353
HincII	GTYRAC	1 cut(s)	265
HindII	GTYRAC	1 cut(s)	265
HinfI	GANTC	5 cut(s)	85, 857, 878, 933, 1273
HpaII	CCGG	1 cut(s)	422
HphI	GGTGA	8 cut(s)	94, 452, 488, 530, 873, 1244, 1462, 1696
Hpy166II	GTNNAC	3 cut(s)	265, 1538, 1654
Hpy188I	TCNGA	5 cut(s)	183, 608, 696, 1035, 1765
Hpy188III	TCNNGA	8 cut(s)	397, 658, 868, 1267, 1369, 1508, 1643, 1742
Hpy8I	GTNNAC	3 cut(s)	265, 1538, 1654
HpyAV	CCTTC	2 cut(s)	113, 1721
HpyCH4III	ACNGT	5 cut(s)	1046, 1068, 1115, 1601, 1613
HpyCH4IV	ACGT	1 cut(s)	836
HpyCH4V	TGCA	8 cut(s)	448, 548, 678, 763, 1120, 1538, 1717, 1721
HpyF10VI	GCNNNNNNNGC	1 cut(s)	956
HpyF3I	CTNAG	6 cut(s)	516, 866, 918, 1185, 1315, 1455
HpySE526I	ACGT	1 cut(s)	836
HspAI	GCGC	1 cut(s)	1353
KpnI	GGTACC	1 cut(s)	828
Ksp22I	TGATCA	2 cut(s)	286, 1738
Kzo9I	GATC	7 cut(s)	127, 189, 286, 603, 702, 1629, 1738
LguI	GCTCTTC	1 cut(s)	578
LmnI	GCTCC	3 cut(s)	51, 79, 177
Lsp1109I	GCAGC	1 cut(s)	393
LweI	GCATC	5 cut(s)	159, 393, 772, 1014, 1159
MaeI	CTAG	2 cut(s)	351, 840
MaeII	ACGT	1 cut(s)	836
MaeIII	GTNAC	4 cut(s)	511, 1006, 1438, 1601
MalI	GATC	7 cut(s)	129, 191, 288, 605, 704, 1631, 1740
MboI	GATC	7 cut(s)	127, 189, 286, 603, 702, 1629, 1738
MboII	GAAGA	8 cut(s)	128, 495, 565, 697, 787, 852, 1639, 1784
MflI	RGATCY	4 cut(s)	127, 189, 702, 1629
MhlI	GDGCHC	5 cut(s)	358, 457, 555, 1242, 1540
MlsI	TGGCCA	2 cut(s)	34, 335
MluCI	AATT	7 cut(s)	18, 251, 372, 522, 773, 784, 1571
MluNI	TGGCCA	2 cut(s)	34, 335
MlyI	GAGTC	1 cut(s)	927
Mox20I	TGGCCA	2 cut(s)	34, 335
Mph1103I	ATGCAT	1 cut(s)	1723
MroXI	GAANNNNTTC	1 cut(s)	613
MscI	TGGCCA	2 cut(s)	34, 335
MseI	TTAA	6 cut(s)	57, 726, 908, 1224, 1335, 1834
MslI	CAYNNNNRTG	2 cut(s)	401, 1746
Msp20I	TGGCCA	2 cut(s)	34, 335
MspA1I	CMGCKG	1 cut(s)	1450
MspCI	CTTAAG	1 cut(s)	725
MspI	CCGG	1 cut(s)	422
MspR9I	CCNGG	4 cut(s)	15, 337, 1361, 1433
Mva1269I	GAATGC	1 cut(s)	1341
MvaI	CCWGG	4 cut(s)	15, 337, 1361, 1433
MwoI	GCNNNNNNNGC	1 cut(s)	956
NcoI	CCATGG	2 cut(s)	35, 828
NdeI	CATATG	1 cut(s)	820
NdeII	GATC	7 cut(s)	127, 189, 286, 603, 702, 1629, 1738
NlaIV	GGNNCC	1 cut(s)	826
NmeAIII	GCCGAG	1 cut(s)	935
NmuCI	GTSAC	1 cut(s)	511
NsiI	ATGCAT	1 cut(s)	1723
NspI	RCATGY	1 cut(s)	1721
NspV	TTCGAA	1 cut(s)	255
PaeI	GCATGC	1 cut(s)	1721
PagI	TCATGA	4 cut(s)	396, 657, 1507, 1741
PciSI	GCTCTTC	1 cut(s)	578
PctI	GAATGC	1 cut(s)	1341
PdmI	GAANNNNTTC	1 cut(s)	613
PfeI	GAWTC	4 cut(s)	85, 857, 878, 1273
PkrI	GCNGC	1 cut(s)	408
PleI	GAGTC	1 cut(s)	927
PpsI	GAGTC	1 cut(s)	927
PsiI	TTATAA	1 cut(s)	1208
Psp6I	CCWGG	4 cut(s)	13, 335, 1359, 1431
PspFI	CCCAGC	1 cut(s)	1706
PspGI	CCWGG	4 cut(s)	13, 335, 1359, 1431
PspN4I	GGNNCC	1 cut(s)	826
PspPI	GGNCC	2 cut(s)	244, 419
PsuI	RGATCY	4 cut(s)	127, 189, 702, 1629
PvuII	CAGCTG	1 cut(s)	1450
RsaI	GTAC	8 cut(s)	62, 431, 752, 781, 826, 986, 1124, 1615
RsaNI	GTAC	8 cut(s)	61, 430, 751, 780, 825, 985, 1123, 1614
RseI	CAYNNNNRTG	2 cut(s)	401, 1746
SapI	GCTCTTC	1 cut(s)	578
SaqAI	TTAA	6 cut(s)	57, 726, 908, 1224, 1335, 1834
SatI	GCNGC	1 cut(s)	407
Sau3AI	GATC	7 cut(s)	127, 189, 286, 603, 702, 1629, 1738
Sau96I	GGNCC	2 cut(s)	244, 419
ScaI	AGTACT	2 cut(s)	62, 1124
SchI	GAGTC	1 cut(s)	927
ScrFI	CCNGG	4 cut(s)	15, 337, 1361, 1433
SduI	GDGCHC	5 cut(s)	358, 457, 555, 1242, 1540
SfaNI	GCATC	5 cut(s)	159, 393, 772, 1014, 1159
SfcI	CTRYAG	1 cut(s)	1488
SfuI	TTCGAA	1 cut(s)	255
SinI	GGWCC	1 cut(s)	419
SmiMI	CAYNNNNRTG	2 cut(s)	401, 1746
SmlI	CTYRAG	2 cut(s)	725, 1643
SmoI	CTYRAG	2 cut(s)	725, 1643
SphI	GCATGC	1 cut(s)	1721
Sse9I	AATT	7 cut(s)	18, 251, 372, 522, 773, 784, 1571
SsiI	CCGC	1 cut(s)	1577
SspI	AATATT	1 cut(s)	1554
SspMI	CTAG	2 cut(s)	351, 840
StyD4I	CCNGG	4 cut(s)	13, 335, 1359, 1431
StyI	CCWWGG	5 cut(s)	35, 77, 350, 828, 1676
TaaI	ACNGT	5 cut(s)	1046, 1068, 1115, 1601, 1613
TaiI	ACGT	1 cut(s)	839
TaqI	TCGA	6 cut(s)	249, 255, 426, 651, 684, 1795
TasI	AATT	7 cut(s)	18, 251, 372, 522, 773, 784, 1571
TatI	WGTACW	3 cut(s)	60, 1122, 1613
TfiI	GAWTC	4 cut(s)	85, 857, 878, 1273
Tru1I	TTAA	6 cut(s)	57, 726, 908, 1224, 1335, 1834
Tru9I	TTAA	6 cut(s)	57, 726, 908, 1224, 1335, 1834
TscAI	CASTG	5 cut(s)	520, 680, 945, 1073, 1616
TseFI	GTSAC	1 cut(s)	511
TseI	GCWGC	1 cut(s)	406
Tsp45I	GTSAC	1 cut(s)	511
TspGWI	ACGGA	2 cut(s)	1551, 1560
TspRI	CASTG	5 cut(s)	520, 680, 945, 1073, 1616
Vha464I	CTTAAG	1 cut(s)	725
VneI	GTGCAC	1 cut(s)	1536
VpaK11BI	GGWCC	1 cut(s)	419
XagI	CCTNNNNNAGG	1 cut(s)	1385
XapI	RAATTY	2 cut(s)	18, 251
XceI	RCATGY	1 cut(s)	1721
XcmI	CCANNNNNNNNNTGG	1 cut(s)	159
XmaJI	CCTAGG	1 cut(s)	350
XmnI	GAANNNNTTC	1 cut(s)	613
XspI	CTAG	2 cut(s)	351, 840
ZrmI	AGTACT	2 cut(s)	62, 1124
Zsp2I	ATGCAT	1 cut(s)	1723

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.