Rw1G015130

Belongs to the sterol desaturase family

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
Physical Location & Seq
Forward (+)
33700797 .. 33704917
4121 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G015130.1

Sequence Viewer

Length: 1944 bp
ATGTGCATGAAGTATACATGGACACCTATAAAAGATAAAACCAGAATGTTAATCAAGGCACAGTTTCAAAGAAAAATGGCTTCCAATCCTGGTATTCTGACTGAATGGCCATGGACACCTCTTGGAAACTTTAAGTACGTGGTGGTTGCTCCCTGGGCGATACACAGCATATACTCGTTCATTGTTAATGAGGGAGAAGACAGAGATCTATCTTACTTCCTCATATTTCCATTCATGTTGTTTAGGATGCTGCACAACCAGTTATGGATCTCTCTTTCTCGATATAAAACATCCAAAGGCAGCGGCCGGATCATCGACAAGGGTCTAGAGTTCGAACAAGTTGACAGAGAAAGAAACTGGGATGACCAAATTATATTCAATGGACTATTGTTCTTCCTAGGCAGCAGGCACTTGACCGGAGGTCGAAACCTACCGATGTGGAGAGGACATGGATTCGTTATAACATTTCTGCTTCATGCTGGTCCAGTGGAGTTTCTTTACTACTGGTTGCATAGAGCTCTGCACCACCATTACCTATACTCTCGCTACCATTCTCACCACCATTCCTCCATTGTCACTGAGCCAATTACTTCTGTAATTCACCCATTTGGGGAGCACATAGCATATTCCCTCCTTTTCGCAATACCCTTGTACGCAATGGCATTGACGGGAACAGGTTCAATCATAAGCTATACAGTTTATGTTACTTACATTGACTTAATGAACAATATGGGACACTGCAACTTCGAGCTCATTCCAAATTGGACCTTCTCTCTTTTTCCTCCACTCAAGTATTTCATATATACCCCATCGTACCACTCTTTGCATCACACCCTATTTCGAACCAATTATTGCCTCTTCATGCCACTTTATGATTACATTTATGGCACCATGGAAAAGACTAGTGATGAACTGTATGAATCTTCACTCAAAAGAAAAGATGAAGCTCCAGATGTGTTGCATCTAACCCATCTTACAACACCCGACTCCATCTATCAACTTCCTTTGGGATTTGCTTCCTTGGCCTCTGAGCCGTACACTTCAACATGGTACATGTGGATGATGTGGCCTGTTACATTTTGGTCGATGATGCTCACATGGATTTATGGTCGCACATTTGTGGTTGAGAGGCAGCGGTTTGATAAACTCAAATTACAAACTTGGGCGATCCCAAAATACAATTTGCAATACTTCTTGCCATGGCAAGATGAAGCTATCAACAGTTTAATTGAGGAAGCTATACTTAAAGCAGAGGAAAAGGGTGTCAAAGTTGTAAGTTTGGGGCTCTTAAACCAGGGTGAGGAGCTGAATAGATATGGTGGTCTATATACTTGGAGATATCCTCAGCTGAAAGTAAAGGTAGTGGATGGAAGTAGCTTAGCTGTGGCTGTAATCCTCAACAGCATACCAAAAGAGACAACCCAAGTTGTTCTTACAGGCAACCTTACAAAGGTTGCTTATGAAATTGCATTTGCTTTGAGCCAGAGGGGCATTGAGGTAGCTACATTATACAAGGATGAGTATTTGAAGCTCACCAAATCATTAAGTGCTACTAAGAGTGCGGTGGTTCTTGCAAAAGGCTCTGGTTCAAAGATTTGGTTAGTGGGAGATGGATTGAGTAAAGATCAACTAAATGCACCAAAAGGAACAATGTTTGTTCCCTTCTCCCAATTCCCCCTAAAAATGTTGCGCAGGGACTGCTTCTACCACTGCACTCCAGCAATGAAGATCCCCCGGTCTCTTGAGAATGTTTACTCGTGTGAGAACTGGTTGCCAAGAAGGGTGATGAGCGCATGGCGCATAGCTGGAATAGTGCATGCCTTGGAAGGTTGGAATGAACATGAGTGTGGTTACGCCACGTCCGACATCGACAAGGTTTGGGAAGCTACGCTTCGACATGGCTTTCAACCTCTGATCCCCAATGCTACTCCGAACAAATATTAA

Protein Analysis

647

Amino Acids

75.17

Weight (kDa)

8.8

Isoelectric Point (pI)

28.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FA_hydroxylase PF04116 158 - 297 1.8e-20 Fatty acid hydroxylase
CER1-like_C PF12076 476 - 637 8.6e-69 CER1-like, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000300)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G02190 AT1G02190 AT1G02205 AT1G02205 AT1G02205 AT1G02205 AT1G02205 AT2G37700 AT2G37700 AT2G37700 AT2G37700
fragaria_vesca FvH4_1g22160 FvH4_7g08560 FvH4_7g08560 FvH4_7g08560 FvH4_7g08570 FvH4_7g08570 FvH4_7g08590 FvH4_7g08590
malus_domestica MD02G1226900.v1.1 MD07G1083700.v1.1 MD07G1083800.v1.1 MD07G1086200.v1.1 MD07G1086300.v1.1 MD07G1086700.v1.1 MD13G1075600.v1.1
prunus_persica Prupe.2G112600_v2.0.a1 Prupe.2G112800_v2.0.a1 Prupe.2G113000_v2.0.a1 Prupe.2G113500_v2.0.a1 Prupe.2G113600_v2.0.a1
pyrus_communis pycom02g19600 pycom02g19610 pycom07g06920 pycom07g06930
rosa_chinensis RchiOBHm_Chr1g0343261 RchiOBHm_Chr1g0343301 RchiOBHm_Chr1g0343371 RchiOBHm_Chr1g0343431 RchiOBHm_Chr1g0343441 RchiOBHm_Chr1g0343521 RchiOBHm_Chr1g0343691 RchiOBHm_Chr1g0343791
rosa_laevigata RLG00000028951 RLG00000028953 RLG00000028965 RLG00000028968 RLG00000028969 RLG00000028971 RLG00000028972 RLG00000028974 RLG00000029891
rosa_multiflora Rmu_sc0000021.1_g000002 Rmu_sc0000335.1_g000046 Rmu_sc0000335.1_g000047 Rmu_sc0000335.1_g000058 Rmu_sc0000335.1_g000061 Rmu_sc0000335.1_g000106 Rmu_sc0000335.1_g000125 Rmu_sc0000544.1_g000010 Rmu_sc0003430.1_g000012 Rmu_sc0005796.1_g000004 Rmu_sc0028268.1_g000001 Rmu_ssc0000259.1_g000038
rosa_roxburghii Rroxscaffold_2G00110090 Rroxscaffold_4G00310350 Rroxscaffold_4G00310610 Rroxscaffold_4G00310710 Rroxscaffold_4G00310740 Rroxscaffold_4G00310760 Rroxscaffold_4G00321110
rosa_rugosa Rorug01G0080100 Rorug01G0080200 Rorug01G0166400 Rorug01G0166500 Rorug01G0166500 Rorug01G0166600 Rorug01G0166700 Rorug01G0166800 Rorug01G0168400 Rorug01G0168500 Rorug01G0168800 Rorug03G0241300 Rorug03G0241400 Rorug04G0001200 Rorug06G0031500 Rorug06G0073200 Rorug06G0264000
rosa_samantha Rh1AG098100 Rh1AG181800 Rh1AG182100 Rh1AG182400 Rh1AG183000 Rh1AG183600 Rh1AG184300 Rh1AG185400 Rh1BG104000 Rh1BG150000 Rh1BG150400 Rh1BG152100 Rh1BG152300 Rh1CG168600 Rh1CG168900 Rh1CG169000 Rh1CG169700 Rh1CG170500 Rh1CG171200 Rh1DG182000 Rh1DG182300 Rh1DG184000 Rh1DG184200
rosa_wichuraiana Rw0G012940 Rw1G007640 Rw1G007670 Rw1G011320 Rw1G015090 Rw1G015110 Rw1G015130 Rw1G015150 Rw1G015290

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 461
Acc16I TGCGCA 1 cut(s) 1691
AccB1I GGYRCC 1 cut(s) 887
AccI GTMKAC 1 cut(s) 14
AciI CCGC 3 cut(s) 303, 1135, 1562
AclWI GGATC 5 cut(s) 275, 317, 1162, 1723, 1909
AcoI YGGCCR 2 cut(s) 107, 304
AfaI GTAC 5 cut(s) 137, 653, 815, 1037, 1052
AfiI CCNNNNNNNGG 3 cut(s) 610, 1300, 1450
AflIII ACRYGT 1 cut(s) 1053
AgsI TTSAA 7 cut(s) 68, 379, 681, 1044, 1528, 1590, 1907
AhdI GACNNNNNGTC 1 cut(s) 420
AhlI ACTAGT 1 cut(s) 902
AjiI CACGTC 1 cut(s) 1860
AjnI CCWGG 3 cut(s) 88, 152, 1293
AleI CACNNNNGTG 1 cut(s) 1118
Alw21I GWGCWC 3 cut(s) 520, 618, 753
Alw26I GTCTC 2 cut(s) 1409, 1743
AlwI GGATC 5 cut(s) 275, 317, 1162, 1723, 1909
AlwNI CAGNNNCTG 1 cut(s) 1698
AoxI GGCC 4 cut(s) 107, 304, 1023, 1067
ApeKI GCWGC 4 cut(s) 250, 300, 402, 1132
Asp700I GAANNNNTTC 1 cut(s) 676
AspA2I CCTAGG 1 cut(s) 397
AspLEI GCGC 3 cut(s) 1692, 1793, 1800
AspS9I GGNCC 2 cut(s) 482, 765
AsuC2I CCSGG 1 cut(s) 1735
AsuHPI GGTGA 5 cut(s) 548, 593, 1310, 1525, 1795
AsuII TTCGAA 2 cut(s) 333, 841
AvaII GGWCC 2 cut(s) 482, 765
AvrII CCTAGG 1 cut(s) 397
BalI TGGCCA 1 cut(s) 109
BanI GGYRCC 1 cut(s) 887
BanII GRGCYC 3 cut(s) 520, 753, 1287
BauI CACGAG 1 cut(s) 1756
BbsI GAAGAC 1 cut(s) 204
Bbv12I GWGCWC 3 cut(s) 520, 618, 753
BbvCI CCTCAGC 1 cut(s) 1344
BbvI GCAGC 4 cut(s) 237, 312, 414, 1144
BccI CCATC 5 cut(s) 817, 978, 998, 1361, 1604
BceAI ACGGC 1 cut(s) 1018
BciT130I CCWGG 3 cut(s) 90, 154, 1295
BcnI CCSGG 1 cut(s) 1735
BcoDI GTCTC 2 cut(s) 1409, 1743
BcuI ACTAGT 1 cut(s) 902
BfaI CTAG 3 cut(s) 326, 398, 903
BglI GCCNNNNNGGC 1 cut(s) 1488
BglII AGATCT 1 cut(s) 205
BisI GCNGC 5 cut(s) 251, 301, 304, 403, 1133
BlnI CCTAGG 1 cut(s) 397
BlpI GCTNAGC 1 cut(s) 1378
BlsI GCNGC 5 cut(s) 252, 302, 305, 404, 1134
Bme1390I CCNGG 4 cut(s) 90, 154, 1295, 1735
Bme18I GGWCC 2 cut(s) 482, 765
BmeRI GACNNNNNGTC 1 cut(s) 420
BmgBI CACGTC 1 cut(s) 1860
BmgT120I GGNCC 2 cut(s) 482, 765
BmiI GGNNCC 1 cut(s) 889
BmrFI CCNGG 4 cut(s) 90, 154, 1295, 1735
BmrI ACTGGG 1 cut(s) 367
BmsI GCATC 4 cut(s) 237, 835, 970, 1080
BmuI ACTGGG 1 cut(s) 367
BoxI GACNNNNGTC 1 cut(s) 321
BpiI GAAGAC 1 cut(s) 204
BplI GAGNNNNNCTC 2 cut(s) 1327, 1359
BpmI CTGGAG 2 cut(s) 933, 1701
Bpu10I CCTNAGC 1 cut(s) 1344
Bpu1102I GCTNAGC 1 cut(s) 1378
Bpu14I TTCGAA 2 cut(s) 333, 841
BpuEI CTTGAG 2 cut(s) 773, 1763
BpuMI CCSGG 1 cut(s) 1735
BsaAI YACGTR 1 cut(s) 139
BsaI GGTCTC 1 cut(s) 1743
BsaWI WCCGGW 1 cut(s) 416
BsaXI ACNNNNNCTCC 2 cut(s) 551, 581
Bsc4I CCNNNNNNNGG 3 cut(s) 610, 1300, 1450
Bse1I ACTGG 5 cut(s) 259, 362, 485, 509, 1772
Bse3DI GCAATG 2 cut(s) 663, 1728
BseBI CCWGG 3 cut(s) 90, 154, 1295
BseGI GGATG 6 cut(s) 252, 290, 367, 1065, 1372, 1522
BseLI CCNNNNNNNGG 3 cut(s) 610, 1300, 1450
BseMI GCAATG 2 cut(s) 663, 1728
BseMII CTCAG 3 cut(s) 570, 1020, 1358
BseNI ACTGG 5 cut(s) 259, 362, 485, 509, 1772
BseRI GAGGAG 1 cut(s) 1316
BseX3I CGGCCG 1 cut(s) 304
BseXI GCAGC 4 cut(s) 237, 312, 414, 1144
BsgI GTGCAG 3 cut(s) 236, 506, 1696
Bsh1285I CGRYCG 1 cut(s) 307
BshFI GGCC 4 cut(s) 109, 306, 1025, 1069
BshNI GGYRCC 1 cut(s) 887
BsiEI CGRYCG 1 cut(s) 307
BsiHKAI GWGCWC 3 cut(s) 520, 618, 753
BsiSI CCGG 3 cut(s) 307, 417, 1735
BslFI GGGAC 2 cut(s) 747, 1709
BslI CCNNNNNNNGG 3 cut(s) 610, 1300, 1450
BsmAI GTCTC 2 cut(s) 1409, 1743
BsmFI GGGAC 2 cut(s) 747, 1709
BsnI GGCC 4 cut(s) 109, 306, 1025, 1069
Bso31I GGTCTC 1 cut(s) 1743
Bsp119I TTCGAA 2 cut(s) 333, 841
Bsp1286I GDGCHC 4 cut(s) 520, 618, 753, 1287
Bsp143I GATC 7 cut(s) 205, 267, 309, 1167, 1624, 1728, 1914
Bsp1720I GCTNAGC 1 cut(s) 1378
Bsp19I CCATGG 3 cut(s) 110, 891, 1199
BspACI CCGC 3 cut(s) 303, 1135, 1562
BspANI GGCC 4 cut(s) 109, 306, 1025, 1069
BspCNI CTCAG 3 cut(s) 571, 1021, 1357
BspLI GGNNCC 1 cut(s) 889
BspPI GGATC 5 cut(s) 275, 317, 1162, 1723, 1909
BspT104I TTCGAA 2 cut(s) 333, 841
BspT107I GGYRCC 1 cut(s) 887
BspTNI GGTCTC 1 cut(s) 1743
BsrDI GCAATG 2 cut(s) 663, 1728
BsrI ACTGG 5 cut(s) 259, 362, 485, 509, 1772
BssMI GATC 7 cut(s) 205, 267, 309, 1167, 1624, 1728, 1914
BssNAI GTATAC 1 cut(s) 15
BssSI CACGAG 1 cut(s) 1756
BssT1I CCWWGG 6 cut(s) 110, 397, 891, 1020, 1199, 1821
Bst1107I GTATAC 1 cut(s) 15
Bst2BI CACGAG 1 cut(s) 1756
Bst2UI CCWGG 3 cut(s) 90, 154, 1295
Bst4CI ACNGT 4 cut(s) 63, 697, 915, 1223
Bst6I CTCTTC 1 cut(s) 863
BstAPI GCANNNNNTGC 1 cut(s) 1698
BstBAI YACGTR 1 cut(s) 139
BstBI TTCGAA 2 cut(s) 333, 841
BstC8I GCNNGC 2 cut(s) 407, 1818
BstDEI CTNAG 5 cut(s) 579, 1029, 1344, 1378, 1554
BstDSI CCRYGG 3 cut(s) 110, 891, 1199
BstENI CCTNNNNNAGG 1 cut(s) 1448
BstF5I GGATG 6 cut(s) 252, 290, 367, 1065, 1372, 1522
BstHHI GCGC 3 cut(s) 1692, 1793, 1800
BstKTI GATC 7 cut(s) 208, 270, 312, 1170, 1627, 1731, 1917
BstMAI GTCTC 2 cut(s) 1409, 1743
BstMBI GATC 7 cut(s) 205, 267, 309, 1167, 1624, 1728, 1914
BstMCI CGRYCG 1 cut(s) 307
BstMWI GCNNNNNNNGC 5 cut(s) 155, 1022, 1488, 1698, 1797
BstNI CCWGG 3 cut(s) 90, 154, 1295
BstNSI RCATGY 2 cut(s) 1057, 1820
BstPAI GACNNNNGTC 1 cut(s) 321
BstSCI CCNGG 4 cut(s) 88, 152, 1293, 1733
BstV1I GCAGC 4 cut(s) 237, 312, 414, 1144
BstV2I GAAGAC 1 cut(s) 204
BstX2I RGATCY 3 cut(s) 205, 267, 1728
BstYI RGATCY 3 cut(s) 205, 267, 1728
BstZ17I GTATAC 1 cut(s) 15
BstZI CGGCCG 1 cut(s) 304
BsuRI GGCC 4 cut(s) 109, 306, 1025, 1069
BtgI CCRYGG 3 cut(s) 110, 891, 1199
BtrI CACGTC 1 cut(s) 1860
BtsCI GGATG 6 cut(s) 252, 290, 367, 1065, 1372, 1522
BtsI GCAGTG 2 cut(s) 736, 1708
BtsIMutI CAGTG 4 cut(s) 492, 576, 736, 1708
Cac8I GCNNGC 2 cut(s) 407, 1818
CaiI CAGNNNCTG 1 cut(s) 1698
CfoI GCGC 3 cut(s) 1692, 1793, 1800
Cfr13I GGNCC 2 cut(s) 482, 765
Csp6I GTAC 5 cut(s) 136, 652, 814, 1036, 1051
CviQI GTAC 5 cut(s) 136, 652, 814, 1036, 1051
DdeI CTNAG 5 cut(s) 579, 1029, 1344, 1378, 1554
DpnI GATC 7 cut(s) 207, 269, 311, 1169, 1626, 1730, 1916
DpnII GATC 7 cut(s) 205, 267, 309, 1167, 1624, 1728, 1914
DriI GACNNNNNGTC 1 cut(s) 420
EaeI YGGCCR 2 cut(s) 107, 304
EagI CGGCCG 1 cut(s) 304
Eam1104I CTCTTC 1 cut(s) 863
Eam1105I GACNNNNNGTC 1 cut(s) 420
EarI CTCTTC 1 cut(s) 863
Ecl136II GAGCTC 2 cut(s) 518, 751
EclXI CGGCCG 1 cut(s) 304
Eco130I CCWWGG 6 cut(s) 110, 397, 891, 1020, 1199, 1821
Eco24I GRGCYC 3 cut(s) 520, 753, 1287
Eco31I GGTCTC 1 cut(s) 1743
Eco32I GATATC 1 cut(s) 1340
Eco47I GGWCC 2 cut(s) 482, 765
Eco52I CGGCCG 1 cut(s) 304
Eco53kI GAGCTC 2 cut(s) 518, 751
EcoICRI GAGCTC 2 cut(s) 518, 751
EcoNI CCTNNNNNAGG 1 cut(s) 1448
EcoRII CCWGG 3 cut(s) 88, 152, 1293
EcoRV GATATC 1 cut(s) 1340
EcoT14I CCWWGG 6 cut(s) 110, 397, 891, 1020, 1199, 1821
EcoT38I GRGCYC 3 cut(s) 520, 753, 1287
ErhI CCWWGG 6 cut(s) 110, 397, 891, 1020, 1199, 1821
FalI AAGNNNNNCTT 6 cut(s) 1227, 1259, 1416, 1448, 1875, 1907
FaqI GGGAC 2 cut(s) 747, 1709
FblI GTMKAC 1 cut(s) 14
Fnu4HI GCNGC 5 cut(s) 251, 301, 304, 403, 1133
FokI GGATG 6 cut(s) 259, 277, 374, 1072, 1379, 1529
FriOI GRGCYC 3 cut(s) 520, 753, 1287
Fsp4HI GCNGC 5 cut(s) 251, 301, 304, 403, 1133
FspBI CTAG 3 cut(s) 326, 398, 903
FspI TGCGCA 1 cut(s) 1691
GlaI GCGC 3 cut(s) 1691, 1792, 1799
GluI GCNGC 5 cut(s) 251, 301, 304, 403, 1133
GsuI CTGGAG 2 cut(s) 933, 1701
HaeIII GGCC 4 cut(s) 109, 306, 1025, 1069
HapII CCGG 3 cut(s) 307, 417, 1735
HhaI GCGC 3 cut(s) 1692, 1793, 1800
Hin6I GCGC 3 cut(s) 1690, 1791, 1798
HinP1I GCGC 3 cut(s) 1690, 1791, 1798
HincII GTYRAC 1 cut(s) 343
HindII GTYRAC 1 cut(s) 343
HinfI GANTC 3 cut(s) 453, 920, 986
HpaII CCGG 3 cut(s) 307, 417, 1735
HphI GGTGA 5 cut(s) 548, 593, 1310, 1525, 1795
Hpy166II GTNNAC 4 cut(s) 15, 343, 1038, 1753
Hpy188I TCNGA 5 cut(s) 99, 1030, 1864, 1914, 1932
Hpy188III TCNNGA 4 cut(s) 279, 326, 950, 1742
Hpy8I GTNNAC 4 cut(s) 15, 343, 1038, 1753
HpyAV CCTTC 4 cut(s) 778, 1672, 1773, 1820
HpyCH4III ACNGT 4 cut(s) 63, 697, 915, 1223
HpyCH4IV ACGT 2 cut(s) 138, 1859
HpyF10VI GCNNNNNNNGC 5 cut(s) 155, 1022, 1488, 1698, 1797
HpyF3I CTNAG 5 cut(s) 579, 1029, 1344, 1378, 1554
HpySE526I ACGT 2 cut(s) 138, 1859
HspAI GCGC 3 cut(s) 1690, 1791, 1798
Kzo9I GATC 7 cut(s) 205, 267, 309, 1167, 1624, 1728, 1914
LmnI GCTCC 4 cut(s) 154, 613, 952, 1303
Lsp1109I GCAGC 4 cut(s) 237, 312, 414, 1144
LweI GCATC 4 cut(s) 237, 835, 970, 1080
MaeI CTAG 3 cut(s) 326, 398, 903
MaeII ACGT 2 cut(s) 138, 1859
MaeIII GTNAC 4 cut(s) 574, 703, 1072, 1850
MalI GATC 7 cut(s) 207, 269, 311, 1169, 1626, 1730, 1916
MboI GATC 7 cut(s) 205, 267, 309, 1167, 1624, 1728, 1914
MboII GAAGA 5 cut(s) 209, 385, 850, 915, 1738
MflI RGATCY 3 cut(s) 205, 267, 1728
MhlI GDGCHC 4 cut(s) 520, 618, 753, 1287
MlsI TGGCCA 1 cut(s) 109
MluNI TGGCCA 1 cut(s) 109
MlyI GAGTC 1 cut(s) 980
MmeI TCCRAC 2 cut(s) 1811, 1887
Mox20I TGGCCA 1 cut(s) 109
MroXI GAANNNNTTC 1 cut(s) 676
MscI TGGCCA 1 cut(s) 109
MseI TTAA 9 cut(s) 50, 132, 186, 719, 1226, 1245, 1289, 1544, 1942
MslI CAYNNNNRTG 3 cut(s) 1058, 1118, 1845
Msp20I TGGCCA 1 cut(s) 109
MspA1I CMGCKG 3 cut(s) 303, 1135, 1348
MspI CCGG 3 cut(s) 307, 417, 1735
MspR9I CCNGG 4 cut(s) 90, 154, 1295, 1735
MvaI CCWGG 3 cut(s) 90, 154, 1295
MwoI GCNNNNNNNGC 5 cut(s) 155, 1022, 1488, 1698, 1797
NciI CCSGG 1 cut(s) 1735
NcoI CCATGG 3 cut(s) 110, 891, 1199
NdeII GATC 7 cut(s) 205, 267, 309, 1167, 1624, 1728, 1914
NlaIV GGNNCC 1 cut(s) 889
NmuCI GTSAC 1 cut(s) 574
NsbI TGCGCA 1 cut(s) 1691
NspI RCATGY 2 cut(s) 1057, 1820
NspV TTCGAA 2 cut(s) 333, 841
OliI CACNNNNGTG 1 cut(s) 1118
PaeI GCATGC 1 cut(s) 1820
PasI CCCWGGG 1 cut(s) 153
PciI ACATGT 1 cut(s) 1053
PcsI WCGNNNNNNNCGW 1 cut(s) 1860
PdmI GAANNNNTTC 1 cut(s) 676
PfeI GAWTC 2 cut(s) 453, 920
PkrI GCNGC 5 cut(s) 252, 302, 305, 404, 1134
PleI GAGTC 1 cut(s) 980
PpsI GAGTC 1 cut(s) 980
Ppu21I YACGTR 1 cut(s) 139
PscI ACATGT 1 cut(s) 1053
PshAI GACNNNNGTC 1 cut(s) 321
PsiI TTATAA 1 cut(s) 461
Psp124BI GAGCTC 2 cut(s) 520, 753
Psp6I CCWGG 3 cut(s) 88, 152, 1293
PspGI CCWGG 3 cut(s) 88, 152, 1293
PspN4I GGNNCC 1 cut(s) 889
PspPI GGNCC 2 cut(s) 482, 765
PstNI CAGNNNCTG 1 cut(s) 1698
PsuI RGATCY 3 cut(s) 205, 267, 1728
PvuII CAGCTG 1 cut(s) 1348
RsaI GTAC 5 cut(s) 137, 653, 815, 1037, 1052
RsaNI GTAC 5 cut(s) 136, 652, 814, 1036, 1051
RseI CAYNNNNRTG 3 cut(s) 1058, 1118, 1845
SacI GAGCTC 2 cut(s) 520, 753
SaqAI TTAA 9 cut(s) 50, 132, 186, 719, 1226, 1245, 1289, 1544, 1942
SatI GCNGC 5 cut(s) 251, 301, 304, 403, 1133
Sau3AI GATC 7 cut(s) 205, 267, 309, 1167, 1624, 1728, 1914
Sau96I GGNCC 2 cut(s) 482, 765
SchI GAGTC 1 cut(s) 980
ScrFI CCNGG 4 cut(s) 90, 154, 1295, 1735
SduI GDGCHC 4 cut(s) 520, 618, 753, 1287
SfaNI GCATC 4 cut(s) 237, 835, 970, 1080
SfuI TTCGAA 2 cut(s) 333, 841
SinI GGWCC 2 cut(s) 482, 765
SmiMI CAYNNNNRTG 3 cut(s) 1058, 1118, 1845
SmlI CTYRAG 2 cut(s) 788, 1742
SmoI CTYRAG 2 cut(s) 788, 1742
SpeI ACTAGT 1 cut(s) 902
SphI GCATGC 1 cut(s) 1820
SsiI CCGC 3 cut(s) 303, 1135, 1562
SspI AATATT 1 cut(s) 1940
SspMI CTAG 3 cut(s) 326, 398, 903
SstI GAGCTC 2 cut(s) 520, 753
StyD4I CCNGG 4 cut(s) 88, 152, 1293, 1733
StyI CCWWGG 6 cut(s) 110, 397, 891, 1020, 1199, 1821
TaaI ACNGT 4 cut(s) 63, 697, 915, 1223
TaiI ACGT 2 cut(s) 141, 1862
TaqI TCGA 9 cut(s) 280, 315, 333, 424, 747, 841, 1085, 1869, 1894
TauI GCSGC 1 cut(s) 306
TfiI GAWTC 2 cut(s) 453, 920
Tru1I TTAA 9 cut(s) 50, 132, 186, 719, 1226, 1245, 1289, 1544, 1942
Tru9I TTAA 9 cut(s) 50, 132, 186, 719, 1226, 1245, 1289, 1544, 1942
TscAI CASTG 4 cut(s) 492, 583, 743, 1715
TseFI GTSAC 1 cut(s) 574
TseI GCWGC 4 cut(s) 250, 300, 402, 1132
Tsp45I GTSAC 1 cut(s) 574
TspRI CASTG 4 cut(s) 492, 583, 743, 1715
VpaK11BI GGWCC 2 cut(s) 482, 765
XagI CCTNNNNNAGG 1 cut(s) 1448
XbaI TCTAGA 1 cut(s) 325
XceI RCATGY 2 cut(s) 1057, 1820
XmaJI CCTAGG 1 cut(s) 397
XmiI GTMKAC 1 cut(s) 14
XmnI GAANNNNTTC 1 cut(s) 676
XspI CTAG 3 cut(s) 326, 398, 903
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.