Rh1AG181800

Belongs to the sterol desaturase family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1A
Physical Location & Seq
Forward (+)
34443089 .. 34447669
4581 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1AG181800.1

Sequence Viewer

Length: 1872 bp
ATGGCTTCCAATCCTGGCATTCTGACTGAATGGCCATGGACACCTCTTGGAAACTTTAAGTACGTGGTGGTTGCTCCCTGGGCGATACACAGCATATACTCGTTCATTGTTATTGAGGGAGAAGACAGAGATCTATCTTACTTCCTCATATTTCCATTCATGTTGTTTAGGATGCTGCACAACCAGTTATGGATCTCTCTTTCTCGATATAAAACATCCAAAGGCAGCGGCCGGATCATCGACAAGGGTCTAGAGTTCGAACAAGTGGACAGAGAGAGAAACTGGGATGACCAAATTATATTCAATGGATTATTGTTCTTCCTAGGCAGCAGGCACGTGACCGGAGGTCGAAACCTACCGATGTGGAGAGGAGATGGATTCGTTATAACATTTCTGCTTCATGCTGGTCCAGTGGAGTTTCTTTACTACTGGTTGCATAGAGCTCTGCACCACCATTACCTATACTCTCGCTACCATTCTCACCACCATTCCTCCATTGTCACTGAGCCAATTACTTCTGTAATTCACCCATTTGGGGAGCACATAGCATATTTCCTCCTTTTTGCAATACCCTTGTACACAATGGCGTTGACGGGAACAGGTTCAATCATAAGCTATGCAGTTTATGTTACTTACATTGACTTAATGAACAACATGGGACACTGCAACTTCGAGCTCATTCCAAATTGGACCTTCTCTCTTTTTCCTCCACTCAAGTATTTCATATATACCCCATCGTACCACTCTTTGCATCACACCCTATTTCGAACCAATTATTGCCTCTTCATGCCACTTTATGATTACATTTATGGCACCATGGAAAAGACTAGTGATGAACTGTATGAATCTTCACTCAAAAGAAAAGATGAAGCTCCAGATGTGTTGCATCTAACCCATCTTACAACACCCGACTCCATCTATCAACTTCCTTTGGGATTTGCTTCCTTGGCCTCTGAGCCGCACACTTCAACATGGTACATGTGGTTGATGTGGCCTGTTACATTTTGGTCGATGATGCTCACATGGATTTATGGTCGCACATTTGTGGTTGAGAGGCAGCGGTTTGATAAACTCAAATTACAAACTTGGGCGATCCCAAAATACAATTTGCAATACTTCTTGCCATGGCAAAATGAAGCTATCAACAATTTGATTGAGGAAGCTATACTTAAAGCAGAGGAAAAGGGTGTCAAAGTTGTAAGTTTGGGGCTCTTAAACCAGGGTGAGGAGCTGAATAGATATGGTGGTCTATATACTTGGAGATATCCTCAGCTGAAAGTAAAGGTAGTGGATGGAAGTAGCTTAGCTGTGGCTGTAATCCTCAACAACATACCAAAAGAGACAACCCAAGTTGTTCTTACAGGCAACCTTACAAAGGTTGCTTATGCAATTGCATTTGCTTTGAGCCATAGGGGTATTGAGTTAGCTACATTATACAAGGATGAGTATTTGAAGCTCACCAAATCATTAAGTGCTACTAAAAGTGAGGTGGTTCTTGCAAAAGGCTCTGGTTCAAAGATTTGGTTAGTGGGAGAAGGATTGAGTAAAGAAGACCAACTAAATGCACCAAAAGGAACAATGTTTGTTCCCTTCTCCCAATTCCCCCTAAAAAAGTTGCGCAGGGACTGCTTCTACCACTGCACTCCAGCAATGAAGATCCCCCGGTCTCTTGAGAATGTTTACTCGTGTGAGAACTGGTTGCCAAGAAGGGTGATGAGCGCATGGCGCATAGCTGGAATAGTGCATGCCTTGGAAGGTTGGAATGAACATGAGTGTGGTTACGCCATGTCCGACATCGACAAGGTTTGGGAAGCTACGCTTCGACATGGCTTTCAGCCTCTGATTCTCAATGCTACTCCGAACAAATATTAA

Protein Analysis

623

Amino Acids

72.29

Weight (kDa)

8.04

Isoelectric Point (pI)

31.26

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FA_hydroxylase PF04116 133 - 272 3.9e-20 Fatty acid hydroxylase
CER1-like_C PF12076 451 - 613 3e-71 CER1-like, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000300)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G02190 AT1G02190 AT1G02205 AT1G02205 AT1G02205 AT1G02205 AT1G02205 AT2G37700 AT2G37700 AT2G37700 AT2G37700
fragaria_vesca FvH4_1g22160 FvH4_7g08560 FvH4_7g08560 FvH4_7g08560 FvH4_7g08570 FvH4_7g08570 FvH4_7g08590 FvH4_7g08590
malus_domestica MD02G1226900.v1.1 MD07G1083700.v1.1 MD07G1083800.v1.1 MD07G1086200.v1.1 MD07G1086300.v1.1 MD07G1086700.v1.1 MD13G1075600.v1.1
prunus_persica Prupe.2G112600_v2.0.a1 Prupe.2G112800_v2.0.a1 Prupe.2G113000_v2.0.a1 Prupe.2G113500_v2.0.a1 Prupe.2G113600_v2.0.a1
pyrus_communis pycom02g19600 pycom02g19610 pycom07g06920 pycom07g06930
rosa_chinensis RchiOBHm_Chr1g0343261 RchiOBHm_Chr1g0343301 RchiOBHm_Chr1g0343371 RchiOBHm_Chr1g0343431 RchiOBHm_Chr1g0343441 RchiOBHm_Chr1g0343521 RchiOBHm_Chr1g0343691 RchiOBHm_Chr1g0343791
rosa_laevigata RLG00000028951 RLG00000028953 RLG00000028965 RLG00000028968 RLG00000028969 RLG00000028971 RLG00000028972 RLG00000028974 RLG00000029891
rosa_multiflora Rmu_sc0000021.1_g000002 Rmu_sc0000335.1_g000046 Rmu_sc0000335.1_g000047 Rmu_sc0000335.1_g000058 Rmu_sc0000335.1_g000061 Rmu_sc0000335.1_g000106 Rmu_sc0000335.1_g000125 Rmu_sc0000544.1_g000010 Rmu_sc0003430.1_g000012 Rmu_sc0005796.1_g000004 Rmu_sc0028268.1_g000001 Rmu_ssc0000259.1_g000038
rosa_roxburghii Rroxscaffold_2G00110090 Rroxscaffold_4G00310350 Rroxscaffold_4G00310610 Rroxscaffold_4G00310710 Rroxscaffold_4G00310740 Rroxscaffold_4G00310760 Rroxscaffold_4G00321110
rosa_rugosa Rorug01G0080100 Rorug01G0080200 Rorug01G0166400 Rorug01G0166500 Rorug01G0166500 Rorug01G0166600 Rorug01G0166700 Rorug01G0166800 Rorug01G0168400 Rorug01G0168500 Rorug01G0168800 Rorug03G0241300 Rorug03G0241400 Rorug04G0001200 Rorug06G0031500 Rorug06G0073200 Rorug06G0264000
rosa_samantha Rh1AG098100 Rh1AG181800 Rh1AG182100 Rh1AG182400 Rh1AG183000 Rh1AG183600 Rh1AG184300 Rh1AG185400 Rh1BG104000 Rh1BG150000 Rh1BG150400 Rh1BG152100 Rh1BG152300 Rh1CG168600 Rh1CG168900 Rh1CG169000 Rh1CG169700 Rh1CG170500 Rh1CG171200 Rh1DG182000 Rh1DG182300 Rh1DG184000 Rh1DG184200
rosa_wichuraiana Rw0G012940 Rw1G007640 Rw1G007670 Rw1G011320 Rw1G015090 Rw1G015110 Rw1G015130 Rw1G015150 Rw1G015290

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 386
Acc16I TGCGCA 1 cut(s) 1619
AccB1I GGYRCC 1 cut(s) 812
AciI CCGC 3 cut(s) 228, 959, 1060
AclWI GGATC 4 cut(s) 200, 242, 1087, 1651
AcoI YGGCCR 2 cut(s) 32, 229
AcvI CACGTG 1 cut(s) 337
AfaI GTAC 4 cut(s) 62, 578, 740, 977
AfiI CCNNNNNNNGG 3 cut(s) 535, 1225, 1375
AflIII ACRYGT 1 cut(s) 978
AgsI TTSAA 5 cut(s) 304, 606, 969, 1453, 1515
AhdI GACNNNNNGTC 1 cut(s) 345
AhlI ACTAGT 1 cut(s) 827
AjnI CCWGG 3 cut(s) 13, 77, 1218
AleI CACNNNNGTG 1 cut(s) 1043
Alw21I GWGCWC 3 cut(s) 445, 543, 678
Alw26I GTCTC 2 cut(s) 1334, 1671
AlwI GGATC 4 cut(s) 200, 242, 1087, 1651
AlwNI CAGNNNCTG 2 cut(s) 1626, 1840
AoxI GGCC 4 cut(s) 32, 229, 948, 992
ApeKI GCWGC 4 cut(s) 175, 225, 327, 1057
Asp700I GAANNNNTTC 1 cut(s) 601
AspA2I CCTAGG 1 cut(s) 322
AspLEI GCGC 3 cut(s) 1620, 1721, 1728
AspS9I GGNCC 2 cut(s) 407, 690
AsuC2I CCSGG 1 cut(s) 1663
AsuHPI GGTGA 5 cut(s) 473, 518, 1235, 1450, 1723
AsuII TTCGAA 2 cut(s) 258, 766
AvaII GGWCC 2 cut(s) 407, 690
AvrII CCTAGG 1 cut(s) 322
BalI TGGCCA 1 cut(s) 34
BanI GGYRCC 1 cut(s) 812
BanII GRGCYC 3 cut(s) 445, 678, 1212
BauI CACGAG 1 cut(s) 1684
BbrPI CACGTG 1 cut(s) 337
BbsI GAAGAC 2 cut(s) 129, 1557
Bbv12I GWGCWC 3 cut(s) 445, 543, 678
BbvCI CCTCAGC 1 cut(s) 1269
BbvI GCAGC 4 cut(s) 162, 237, 339, 1069
BccI CCATC 5 cut(s) 368, 742, 903, 923, 1286
BciT130I CCWGG 3 cut(s) 15, 79, 1220
BcnI CCSGG 1 cut(s) 1663
BcoDI GTCTC 2 cut(s) 1334, 1671
BcuI ACTAGT 1 cut(s) 827
BfaI CTAG 3 cut(s) 251, 323, 828
BglII AGATCT 1 cut(s) 130
BisI GCNGC 6 cut(s) 176, 226, 229, 328, 959, 1058
BlnI CCTAGG 1 cut(s) 322
BlpI GCTNAGC 1 cut(s) 1303
BlsI GCNGC 6 cut(s) 177, 227, 230, 329, 960, 1059
Bme1390I CCNGG 4 cut(s) 15, 79, 1220, 1663
Bme18I GGWCC 2 cut(s) 407, 690
BmeRI GACNNNNNGTC 1 cut(s) 345
BmgT120I GGNCC 2 cut(s) 407, 690
BmiI GGNNCC 1 cut(s) 814
BmrFI CCNGG 4 cut(s) 15, 79, 1220, 1663
BmrI ACTGGG 1 cut(s) 292
BmsI GCATC 4 cut(s) 162, 760, 895, 1005
BmuI ACTGGG 1 cut(s) 292
BoxI GACNNNNGTC 1 cut(s) 246
BpiI GAAGAC 2 cut(s) 129, 1557
BplI GAGNNNNNCTC 2 cut(s) 1252, 1284
BpmI CTGGAG 2 cut(s) 858, 1629
Bpu10I CCTNAGC 1 cut(s) 1269
Bpu1102I GCTNAGC 1 cut(s) 1303
Bpu14I TTCGAA 2 cut(s) 258, 766
BpuEI CTTGAG 2 cut(s) 698, 1691
BpuMI CCSGG 1 cut(s) 1663
BsaAI YACGTR 2 cut(s) 64, 337
BsaI GGTCTC 1 cut(s) 1671
BsaWI WCCGGW 1 cut(s) 341
BsaXI ACNNNNNCTCC 2 cut(s) 476, 506
Bsc4I CCNNNNNNNGG 3 cut(s) 535, 1225, 1375
Bse1I ACTGG 5 cut(s) 184, 287, 410, 434, 1700
Bse3DI GCAATG 1 cut(s) 1656
BseBI CCWGG 3 cut(s) 15, 79, 1220
BseGI GGATG 5 cut(s) 177, 215, 292, 1297, 1447
BseLI CCNNNNNNNGG 3 cut(s) 535, 1225, 1375
BseMI GCAATG 1 cut(s) 1656
BseMII CTCAG 3 cut(s) 495, 945, 1283
BseNI ACTGG 5 cut(s) 184, 287, 410, 434, 1700
BseRI GAGGAG 2 cut(s) 384, 1241
BseX3I CGGCCG 1 cut(s) 229
BseXI GCAGC 4 cut(s) 162, 237, 339, 1069
BsgI GTGCAG 3 cut(s) 161, 431, 1624
Bsh1285I CGRYCG 1 cut(s) 232
BshFI GGCC 4 cut(s) 34, 231, 950, 994
BshNI GGYRCC 1 cut(s) 812
BsiEI CGRYCG 1 cut(s) 232
BsiHKAI GWGCWC 3 cut(s) 445, 543, 678
BsiSI CCGG 3 cut(s) 232, 342, 1663
BslFI GGGAC 2 cut(s) 672, 1637
BslI CCNNNNNNNGG 3 cut(s) 535, 1225, 1375
BsmAI GTCTC 2 cut(s) 1334, 1671
BsmFI GGGAC 2 cut(s) 672, 1637
BsmI GAATGC 1 cut(s) 18
BsnI GGCC 4 cut(s) 34, 231, 950, 994
Bso31I GGTCTC 1 cut(s) 1671
Bsp119I TTCGAA 2 cut(s) 258, 766
Bsp1286I GDGCHC 4 cut(s) 445, 543, 678, 1212
Bsp1407I TGTACA 1 cut(s) 576
Bsp143I GATC 5 cut(s) 130, 192, 234, 1092, 1656
Bsp1720I GCTNAGC 1 cut(s) 1303
Bsp19I CCATGG 3 cut(s) 35, 816, 1124
BspACI CCGC 3 cut(s) 228, 959, 1060
BspANI GGCC 4 cut(s) 34, 231, 950, 994
BspCNI CTCAG 3 cut(s) 496, 946, 1282
BspLI GGNNCC 1 cut(s) 814
BspPI GGATC 4 cut(s) 200, 242, 1087, 1651
BspT104I TTCGAA 2 cut(s) 258, 766
BspT107I GGYRCC 1 cut(s) 812
BspTNI GGTCTC 1 cut(s) 1671
BsrDI GCAATG 1 cut(s) 1656
BsrGI TGTACA 1 cut(s) 576
BsrI ACTGG 5 cut(s) 184, 287, 410, 434, 1700
BssMI GATC 5 cut(s) 130, 192, 234, 1092, 1656
BssSI CACGAG 1 cut(s) 1684
BssT1I CCWWGG 6 cut(s) 35, 322, 816, 945, 1124, 1749
Bst2BI CACGAG 1 cut(s) 1684
Bst2UI CCWGG 3 cut(s) 15, 79, 1220
Bst4CI ACNGT 1 cut(s) 840
Bst6I CTCTTC 1 cut(s) 788
BstAPI GCANNNNNTGC 1 cut(s) 1626
BstAUI TGTACA 1 cut(s) 576
BstBAI YACGTR 2 cut(s) 64, 337
BstBI TTCGAA 2 cut(s) 258, 766
BstC8I GCNNGC 2 cut(s) 332, 1746
BstDEI CTNAG 4 cut(s) 504, 954, 1269, 1303
BstDSI CCRYGG 3 cut(s) 35, 816, 1124
BstENI CCTNNNNNAGG 1 cut(s) 1373
BstF5I GGATG 5 cut(s) 177, 215, 292, 1297, 1447
BstHHI GCGC 3 cut(s) 1620, 1721, 1728
BstKTI GATC 5 cut(s) 133, 195, 237, 1095, 1659
BstMAI GTCTC 2 cut(s) 1334, 1671
BstMBI GATC 5 cut(s) 130, 192, 234, 1092, 1656
BstMCI CGRYCG 1 cut(s) 232
BstMWI GCNNNNNNNGC 4 cut(s) 80, 947, 1626, 1725
BstNI CCWGG 3 cut(s) 15, 79, 1220
BstNSI RCATGY 2 cut(s) 982, 1748
BstPAI GACNNNNGTC 1 cut(s) 246
BstSCI CCNGG 4 cut(s) 13, 77, 1218, 1661
BstV1I GCAGC 4 cut(s) 162, 237, 339, 1069
BstV2I GAAGAC 2 cut(s) 129, 1557
BstX2I RGATCY 3 cut(s) 130, 192, 1656
BstYI RGATCY 3 cut(s) 130, 192, 1656
BstZI CGGCCG 1 cut(s) 229
BsuRI GGCC 4 cut(s) 34, 231, 950, 994
BtgI CCRYGG 3 cut(s) 35, 816, 1124
BtsCI GGATG 5 cut(s) 177, 215, 292, 1297, 1447
BtsI GCAGTG 2 cut(s) 661, 1636
BtsIMutI CAGTG 4 cut(s) 417, 501, 661, 1636
Cac8I GCNNGC 2 cut(s) 332, 1746
CaiI CAGNNNCTG 2 cut(s) 1626, 1840
CfoI GCGC 3 cut(s) 1620, 1721, 1728
Cfr13I GGNCC 2 cut(s) 407, 690
Csp6I GTAC 4 cut(s) 61, 577, 739, 976
CviQI GTAC 4 cut(s) 61, 577, 739, 976
DdeI CTNAG 4 cut(s) 504, 954, 1269, 1303
DpnI GATC 5 cut(s) 132, 194, 236, 1094, 1658
DpnII GATC 5 cut(s) 130, 192, 234, 1092, 1656
DriI GACNNNNNGTC 1 cut(s) 345
EaeI YGGCCR 2 cut(s) 32, 229
EagI CGGCCG 1 cut(s) 229
Eam1104I CTCTTC 1 cut(s) 788
Eam1105I GACNNNNNGTC 1 cut(s) 345
EarI CTCTTC 1 cut(s) 788
Ecl136II GAGCTC 2 cut(s) 443, 676
EclXI CGGCCG 1 cut(s) 229
Eco130I CCWWGG 6 cut(s) 35, 322, 816, 945, 1124, 1749
Eco24I GRGCYC 3 cut(s) 445, 678, 1212
Eco31I GGTCTC 1 cut(s) 1671
Eco32I GATATC 1 cut(s) 1265
Eco47I GGWCC 2 cut(s) 407, 690
Eco52I CGGCCG 1 cut(s) 229
Eco53kI GAGCTC 2 cut(s) 443, 676
Eco72I CACGTG 1 cut(s) 337
EcoICRI GAGCTC 2 cut(s) 443, 676
EcoNI CCTNNNNNAGG 1 cut(s) 1373
EcoRII CCWGG 3 cut(s) 13, 77, 1218
EcoRV GATATC 1 cut(s) 1265
EcoT14I CCWWGG 6 cut(s) 35, 322, 816, 945, 1124, 1749
EcoT38I GRGCYC 3 cut(s) 445, 678, 1212
ErhI CCWWGG 6 cut(s) 35, 322, 816, 945, 1124, 1749
FalI AAGNNNNNCTT 6 cut(s) 1152, 1184, 1341, 1373, 1803, 1835
FaqI GGGAC 2 cut(s) 672, 1637
Fnu4HI GCNGC 6 cut(s) 176, 226, 229, 328, 959, 1058
FokI GGATG 5 cut(s) 184, 202, 299, 1304, 1454
FriOI GRGCYC 3 cut(s) 445, 678, 1212
Fsp4HI GCNGC 6 cut(s) 176, 226, 229, 328, 959, 1058
FspBI CTAG 3 cut(s) 251, 323, 828
FspI TGCGCA 1 cut(s) 1619
GlaI GCGC 3 cut(s) 1619, 1720, 1727
GluI GCNGC 6 cut(s) 176, 226, 229, 328, 959, 1058
GsuI CTGGAG 2 cut(s) 858, 1629
HaeIII GGCC 4 cut(s) 34, 231, 950, 994
HapII CCGG 3 cut(s) 232, 342, 1663
HhaI GCGC 3 cut(s) 1620, 1721, 1728
Hin6I GCGC 3 cut(s) 1618, 1719, 1726
HinP1I GCGC 3 cut(s) 1618, 1719, 1726
HincII GTYRAC 1 cut(s) 591
HindII GTYRAC 1 cut(s) 591
HinfI GANTC 4 cut(s) 378, 845, 911, 1843
HpaII CCGG 3 cut(s) 232, 342, 1663
HphI GGTGA 5 cut(s) 473, 518, 1235, 1450, 1723
Hpy166II GTNNAC 4 cut(s) 268, 579, 591, 1681
Hpy188I TCNGA 5 cut(s) 24, 955, 1792, 1842, 1860
Hpy188III TCNNGA 4 cut(s) 204, 251, 875, 1670
Hpy8I GTNNAC 4 cut(s) 268, 579, 591, 1681
HpyAV CCTTC 5 cut(s) 703, 1529, 1600, 1701, 1748
HpyCH4III ACNGT 1 cut(s) 840
HpyCH4IV ACGT 2 cut(s) 63, 336
HpyF10VI GCNNNNNNNGC 4 cut(s) 80, 947, 1626, 1725
HpyF3I CTNAG 4 cut(s) 504, 954, 1269, 1303
HpySE526I ACGT 2 cut(s) 63, 336
HspAI GCGC 3 cut(s) 1618, 1719, 1726
Kzo9I GATC 5 cut(s) 130, 192, 234, 1092, 1656
LmnI GCTCC 4 cut(s) 79, 538, 877, 1228
Lsp1109I GCAGC 4 cut(s) 162, 237, 339, 1069
LweI GCATC 4 cut(s) 162, 760, 895, 1005
MaeI CTAG 3 cut(s) 251, 323, 828
MaeII ACGT 2 cut(s) 63, 336
MaeIII GTNAC 5 cut(s) 337, 499, 628, 997, 1778
MalI GATC 5 cut(s) 132, 194, 236, 1094, 1658
MboI GATC 5 cut(s) 130, 192, 234, 1092, 1656
MboII GAAGA 6 cut(s) 134, 310, 775, 840, 1562, 1666
MfeI CAATTG 1 cut(s) 1389
MflI RGATCY 3 cut(s) 130, 192, 1656
MhlI GDGCHC 4 cut(s) 445, 543, 678, 1212
MlsI TGGCCA 1 cut(s) 34
MluNI TGGCCA 1 cut(s) 34
MlyI GAGTC 1 cut(s) 905
MmeI TCCRAC 2 cut(s) 1739, 1815
Mox20I TGGCCA 1 cut(s) 34
MroXI GAANNNNTTC 1 cut(s) 601
MscI TGGCCA 1 cut(s) 34
MseI TTAA 6 cut(s) 57, 644, 1170, 1214, 1469, 1870
MslI CAYNNNNRTG 2 cut(s) 1043, 1773
Msp20I TGGCCA 1 cut(s) 34
MspA1I CMGCKG 3 cut(s) 228, 1060, 1273
MspI CCGG 3 cut(s) 232, 342, 1663
MspR9I CCNGG 4 cut(s) 15, 79, 1220, 1663
MunI CAATTG 1 cut(s) 1389
Mva1269I GAATGC 1 cut(s) 18
MvaI CCWGG 3 cut(s) 15, 79, 1220
MwoI GCNNNNNNNGC 4 cut(s) 80, 947, 1626, 1725
NciI CCSGG 1 cut(s) 1663
NcoI CCATGG 3 cut(s) 35, 816, 1124
NdeII GATC 5 cut(s) 130, 192, 234, 1092, 1656
NlaIV GGNNCC 1 cut(s) 814
NmuCI GTSAC 2 cut(s) 337, 499
NsbI TGCGCA 1 cut(s) 1619
NspI RCATGY 2 cut(s) 982, 1748
NspV TTCGAA 2 cut(s) 258, 766
OliI CACNNNNGTG 1 cut(s) 1043
PaeI GCATGC 1 cut(s) 1748
PasI CCCWGGG 1 cut(s) 78
PciI ACATGT 1 cut(s) 978
PcsI WCGNNNNNNNCGW 1 cut(s) 1788
PctI GAATGC 1 cut(s) 18
PdmI GAANNNNTTC 1 cut(s) 601
PfeI GAWTC 3 cut(s) 378, 845, 1843
PkrI GCNGC 6 cut(s) 177, 227, 230, 329, 960, 1059
PleI GAGTC 1 cut(s) 905
PmaCI CACGTG 1 cut(s) 337
PmlI CACGTG 1 cut(s) 337
PpsI GAGTC 1 cut(s) 905
Ppu21I YACGTR 2 cut(s) 64, 337
PscI ACATGT 1 cut(s) 978
PshAI GACNNNNGTC 1 cut(s) 246
PsiI TTATAA 1 cut(s) 386
Psp124BI GAGCTC 2 cut(s) 445, 678
Psp6I CCWGG 3 cut(s) 13, 77, 1218
PspCI CACGTG 1 cut(s) 337
PspGI CCWGG 3 cut(s) 13, 77, 1218
PspN4I GGNNCC 1 cut(s) 814
PspPI GGNCC 2 cut(s) 407, 690
PstNI CAGNNNCTG 2 cut(s) 1626, 1840
PsuI RGATCY 3 cut(s) 130, 192, 1656
PvuII CAGCTG 1 cut(s) 1273
RsaI GTAC 4 cut(s) 62, 578, 740, 977
RsaNI GTAC 4 cut(s) 61, 577, 739, 976
RseI CAYNNNNRTG 2 cut(s) 1043, 1773
SacI GAGCTC 2 cut(s) 445, 678
SaqAI TTAA 6 cut(s) 57, 644, 1170, 1214, 1469, 1870
SatI GCNGC 6 cut(s) 176, 226, 229, 328, 959, 1058
Sau3AI GATC 5 cut(s) 130, 192, 234, 1092, 1656
Sau96I GGNCC 2 cut(s) 407, 690
SchI GAGTC 1 cut(s) 905
ScrFI CCNGG 4 cut(s) 15, 79, 1220, 1663
SduI GDGCHC 4 cut(s) 445, 543, 678, 1212
SfaNI GCATC 4 cut(s) 162, 760, 895, 1005
SfuI TTCGAA 2 cut(s) 258, 766
SinI GGWCC 2 cut(s) 407, 690
SmiMI CAYNNNNRTG 2 cut(s) 1043, 1773
SmlI CTYRAG 2 cut(s) 713, 1670
SmoI CTYRAG 2 cut(s) 713, 1670
SpeI ACTAGT 1 cut(s) 827
SphI GCATGC 1 cut(s) 1748
SsiI CCGC 3 cut(s) 228, 959, 1060
SspI AATATT 1 cut(s) 1868
SspMI CTAG 3 cut(s) 251, 323, 828
SstI GAGCTC 2 cut(s) 445, 678
StyD4I CCNGG 4 cut(s) 13, 77, 1218, 1661
StyI CCWWGG 6 cut(s) 35, 322, 816, 945, 1124, 1749
TaaI ACNGT 1 cut(s) 840
TaiI ACGT 2 cut(s) 66, 339
TaqI TCGA 9 cut(s) 205, 240, 258, 349, 672, 766, 1010, 1797, 1822
TatI WGTACW 1 cut(s) 576
TauI GCSGC 2 cut(s) 231, 961
TfiI GAWTC 3 cut(s) 378, 845, 1843
Tru1I TTAA 6 cut(s) 57, 644, 1170, 1214, 1469, 1870
Tru9I TTAA 6 cut(s) 57, 644, 1170, 1214, 1469, 1870
TscAI CASTG 4 cut(s) 417, 508, 668, 1643
TseFI GTSAC 2 cut(s) 337, 499
TseI GCWGC 4 cut(s) 175, 225, 327, 1057
Tsp45I GTSAC 2 cut(s) 337, 499
TspRI CASTG 4 cut(s) 417, 508, 668, 1643
VpaK11BI GGWCC 2 cut(s) 407, 690
XagI CCTNNNNNAGG 1 cut(s) 1373
XbaI TCTAGA 1 cut(s) 250
XceI RCATGY 2 cut(s) 982, 1748
XmaJI CCTAGG 1 cut(s) 322
XmnI GAANNNNTTC 1 cut(s) 601
XspI CTAG 3 cut(s) 251, 323, 828
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.