RLG00000028969

Belongs to the sterol desaturase family

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
Physical Location & Seq
Reverse (-)
30822112 .. 30827031
4920 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000028969

Sequence Viewer

Length: 1929 bp
ATGAACACCTATAAAAGATCAGACCTGGAAGTTAATCAAGGCACAGTTGGGAAAAAAATGGCTTCCAATCCTGGCATTCTGACTGAATGGCCATGGACACCTCTTGGAAACTTTAAGTACGTGGTAGTGGCTCCCTGGGCGATACACAGCATATACTCGTTCATTGTTAATGATGGAGAAGACAGAGATCTATCTTACTTCCTCATATTTCCATTCATGTTGTTTAGGATGCTGCACAACCAGTTATGGATCTCTCTTTCTCGATATAAAACCTCCAAAGGCAGCGGCCGGATCGTCGACAAGGGCCTAGAGTTCGAACAAGTTGACAGAGAAAGAAACTGGGATGACCAAATTATATTCAATGGACTATTGTTCTTCCTAGGCAGCAGGCACGTGACCGGAGGTCGAAACCTACCGATGTGGAGAGGAGATGGATTCGTTATAACATTTTTGCTTCATGCTGGTCCGGTCGAGTTTCTCTACTACTGGTTGCATAGAGCTCTGCACCACCATTACCTTTACTCTCGCTACCATTCTCACCACCATTCCTCCATCGTCACTGAGCCGATTACTTCTGTAATTCACCCATTTGGGGAGCACATAGCATATTTCCTGCTTTTCGCAATACCCTTGTACACAATGGCGTTGACGGGAACAGGTTCAATCATAAGCTATGCAGTCTATGTTACTTATATTGACTTACTGAACAACATGGGACACTGCAACTTCGAGCTCATTCCAAATTGGATCTTCTCTCTTTTTCCTCCACTTAAGTATTTCATATATACCCCATCGTACCACTCTTTGCATCACACCCTATTTCGAACCAATTATTGCCTCTTCATGCCACTTTATGATTACATTTATGGCACCATGGAAAAGACTAGTGATGAACTGTATGAATCTTCACTCAAAAGAAAAGATGAAGCTCCAGATGTGTTGCATCTAACCCATCTTACAACACCCGACTCCATCTATCAACTTCCCTTGGGATTTGCTTCCTTGGCCTCTGAGCCGCACACTTCAACATGGTACATGTGGTTGATGTGGCCTGTTACATTTTGGTCAATGATTCTCACATGGATCCATGGTCGCACATTTGTGGTTGAGAGGCAGCGGTTTGATAAACTCAAATTACAAACTTGGGCGATCCCAAAATACAATTTGCAATACTTCCTGCCATGGCAAAATGAAGCTATCAACAGTTTGATTGAGGAAGCTATACTTAAAGCAGAGGAAAAGGGTGTCAAAGTTGTGAGTTTGGGGCTCTTAAACCAGGGTGAGGAGCTGAATAGATATGGTGGTCTATATATTCGGAGATCTCCTCAGCTGAAAGTAAAGGTAGTGGATGGAAGTAGCTTAGCTGTGGCTGTAATCCTTAACAGCATATCAAAAGAGACAACCCAAGTTGTTTTTACAGGCAAACTTACAAAGGTCGCTTATGCAATTGCATTTGCTTTGAGCCAGAGGGGCATTGAGGTAGCTACATTATACAAGGATGAGTATTTGAAGCTCACCAAATCATTAAGTGCTACTAAGAGTGAGGTGGTTCTTGCAAAAGGCTCTGCTTCAAAGATTTGGTTAGTGGGAGATGGATTGAGTAAAGAAGACCAACTAAATGCACCAAAAGGAACAACGTTTGTTCCCTTCTCCCAATTCCCCCAAAAAAAGTTTCGTAGGGACTGCTTCTACCACTACACTCCAGCAATGATGATACCCAAGTCTCTTGAGAATGTTTACTCGTGTGAGAACTGGTTGCCGAGAAGGGTGATGAGCGCATGGCGCATAGCTGGAATAGTGCATGCCTTGGAAGGTTGGAATCAACATGAGTGTGGTTATGCTATGTCCGACATTGACAAGGTTTGGGAAGCTACGCTTCGACATGGCTTTCAGCCTCTGATCCTCAATGCTTCTCCGAACAAATATTAA

Protein Analysis

643

Amino Acids

74.26

Weight (kDa)

8.7

Isoelectric Point (pI)

34.09

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FA_hydroxylase PF04116 152 - 291 5.1e-20 Fatty acid hydroxylase
CER1-like_C PF12076 470 - 632 4.4e-72 CER1-like, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000300)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G02190 AT1G02190 AT1G02205 AT1G02205 AT1G02205 AT1G02205 AT1G02205 AT2G37700 AT2G37700 AT2G37700 AT2G37700
fragaria_vesca FvH4_1g22160 FvH4_7g08560 FvH4_7g08560 FvH4_7g08560 FvH4_7g08570 FvH4_7g08570 FvH4_7g08590 FvH4_7g08590
malus_domestica MD02G1226900.v1.1 MD07G1083700.v1.1 MD07G1083800.v1.1 MD07G1086200.v1.1 MD07G1086300.v1.1 MD07G1086700.v1.1 MD13G1075600.v1.1
prunus_persica Prupe.2G112600_v2.0.a1 Prupe.2G112800_v2.0.a1 Prupe.2G113000_v2.0.a1 Prupe.2G113500_v2.0.a1 Prupe.2G113600_v2.0.a1
pyrus_communis pycom02g19600 pycom02g19610 pycom07g06920 pycom07g06930
rosa_chinensis RchiOBHm_Chr1g0343261 RchiOBHm_Chr1g0343301 RchiOBHm_Chr1g0343371 RchiOBHm_Chr1g0343431 RchiOBHm_Chr1g0343441 RchiOBHm_Chr1g0343521 RchiOBHm_Chr1g0343691 RchiOBHm_Chr1g0343791
rosa_laevigata RLG00000028951 RLG00000028953 RLG00000028965 RLG00000028968 RLG00000028969 RLG00000028971 RLG00000028972 RLG00000028974 RLG00000029891
rosa_multiflora Rmu_sc0000021.1_g000002 Rmu_sc0000335.1_g000046 Rmu_sc0000335.1_g000047 Rmu_sc0000335.1_g000058 Rmu_sc0000335.1_g000061 Rmu_sc0000335.1_g000106 Rmu_sc0000335.1_g000125 Rmu_sc0000544.1_g000010 Rmu_sc0003430.1_g000012 Rmu_sc0005796.1_g000004 Rmu_sc0028268.1_g000001 Rmu_ssc0000259.1_g000038
rosa_roxburghii Rroxscaffold_2G00110090 Rroxscaffold_4G00310350 Rroxscaffold_4G00310610 Rroxscaffold_4G00310710 Rroxscaffold_4G00310740 Rroxscaffold_4G00310760 Rroxscaffold_4G00321110
rosa_rugosa Rorug01G0080100 Rorug01G0080200 Rorug01G0166400 Rorug01G0166500 Rorug01G0166500 Rorug01G0166600 Rorug01G0166700 Rorug01G0166800 Rorug01G0168400 Rorug01G0168500 Rorug01G0168800 Rorug03G0241300 Rorug03G0241400 Rorug04G0001200 Rorug06G0031500 Rorug06G0073200 Rorug06G0264000
rosa_samantha Rh1AG098100 Rh1AG181800 Rh1AG182100 Rh1AG182400 Rh1AG183000 Rh1AG183600 Rh1AG184300 Rh1AG185400 Rh1BG104000 Rh1BG150000 Rh1BG150400 Rh1BG152100 Rh1BG152300 Rh1CG168600 Rh1CG168900 Rh1CG169000 Rh1CG169700 Rh1CG170500 Rh1CG171200 Rh1DG182000 Rh1DG182300 Rh1DG184000 Rh1DG184200
rosa_wichuraiana Rw0G012940 Rw1G007640 Rw1G007670 Rw1G011320 Rw1G015090 Rw1G015110 Rw1G015130 Rw1G015150 Rw1G015290

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 443
AccB1I GGYRCC 1 cut(s) 869
AccI GTMKAC 1 cut(s) 297
AciI CCGC 3 cut(s) 285, 1016, 1117
AclI AACGTT 1 cut(s) 1637
AclWI GGATC 7 cut(s) 257, 299, 755, 1078, 1091, 1144, 1894
AcoI YGGCCR 2 cut(s) 89, 286
AcvI CACGTG 1 cut(s) 394
AfaI GTAC 4 cut(s) 119, 635, 797, 1034
AfiI CCNNNNNNNGG 2 cut(s) 592, 1282
AflII CTTAAG 1 cut(s) 770
AflIII ACRYGT 1 cut(s) 1035
AgsI TTSAA 5 cut(s) 361, 663, 1026, 1510, 1572
AhdI GACNNNNNGTC 1 cut(s) 402
AhlI ACTAGT 1 cut(s) 884
AjnI CCWGG 4 cut(s) 24, 70, 134, 1275
AjuI GAANNNNNNNTTGG 2 cut(s) 1656, 1688
AleI CACNNNNGTG 1 cut(s) 1100
Alw21I GWGCWC 3 cut(s) 502, 600, 735
Alw26I GTCTC 2 cut(s) 1391, 1728
AlwI GGATC 7 cut(s) 257, 299, 755, 1078, 1091, 1144, 1894
AlwNI CAGNNNCTG 1 cut(s) 1897
AoxI GGCC 5 cut(s) 89, 286, 304, 1005, 1049
ApeKI GCWGC 4 cut(s) 232, 282, 384, 1114
Asp700I GAANNNNTTC 1 cut(s) 658
AspA2I CCTAGG 1 cut(s) 379
AspLEI GCGC 2 cut(s) 1778, 1785
AspS9I GGNCC 2 cut(s) 304, 464
AsuHPI GGTGA 5 cut(s) 530, 575, 1292, 1507, 1780
AsuII TTCGAA 2 cut(s) 315, 823
AvaII GGWCC 1 cut(s) 464
AvrII CCTAGG 1 cut(s) 379
BaeI ACNNNNGTAYC 2 cut(s) 1706, 1739
BalI TGGCCA 1 cut(s) 91
BamHI GGATCC 1 cut(s) 1083
BanI GGYRCC 1 cut(s) 869
BanII GRGCYC 3 cut(s) 502, 735, 1269
BauI CACGAG 1 cut(s) 1741
BbrPI CACGTG 1 cut(s) 394
BbsI GAAGAC 2 cut(s) 186, 1614
Bbv12I GWGCWC 3 cut(s) 502, 600, 735
BbvCI CCTCAGC 1 cut(s) 1326
BbvI GCAGC 4 cut(s) 219, 294, 396, 1126
BccI CCATC 8 cut(s) 167, 425, 560, 799, 960, 980, 1343, 1586
BciT130I CCWGG 4 cut(s) 26, 72, 136, 1277
BcoDI GTCTC 2 cut(s) 1391, 1728
BcuI ACTAGT 1 cut(s) 884
BfaI CTAG 3 cut(s) 308, 380, 885
BfrI CTTAAG 1 cut(s) 770
BglI GCCNNNNNGGC 1 cut(s) 1470
BglII AGATCT 2 cut(s) 187, 1319
BisI GCNGC 6 cut(s) 233, 283, 286, 385, 1016, 1115
BlnI CCTAGG 1 cut(s) 379
BlpI GCTNAGC 1 cut(s) 1360
BlsI GCNGC 6 cut(s) 234, 284, 287, 386, 1017, 1116
Bme1390I CCNGG 4 cut(s) 26, 72, 136, 1277
Bme18I GGWCC 1 cut(s) 464
BmeRI GACNNNNNGTC 1 cut(s) 402
BmgT120I GGNCC 2 cut(s) 304, 464
BmiI GGNNCC 3 cut(s) 132, 871, 1085
BmrFI CCNGG 4 cut(s) 26, 72, 136, 1277
BmrI ACTGGG 1 cut(s) 349
BmsI GCATC 3 cut(s) 219, 817, 952
BmuI ACTGGG 1 cut(s) 349
BpiI GAAGAC 2 cut(s) 186, 1614
BplI GAGNNNNNCTC 2 cut(s) 1309, 1341
BpmI CTGGAG 2 cut(s) 915, 1686
Bpu10I CCTNAGC 1 cut(s) 1326
Bpu1102I GCTNAGC 1 cut(s) 1360
Bpu14I TTCGAA 2 cut(s) 315, 823
BpuEI CTTGAG 1 cut(s) 1748
BsaAI YACGTR 2 cut(s) 121, 394
BsaWI WCCGGW 2 cut(s) 398, 466
BsaXI ACNNNNNCTCC 2 cut(s) 533, 563
Bsc4I CCNNNNNNNGG 2 cut(s) 592, 1282
Bse1I ACTGG 4 cut(s) 241, 344, 491, 1757
Bse3DI GCAATG 1 cut(s) 1713
BseBI CCWGG 4 cut(s) 26, 72, 136, 1277
BseGI GGATG 4 cut(s) 234, 349, 1354, 1504
BseLI CCNNNNNNNGG 2 cut(s) 592, 1282
BseMI GCAATG 1 cut(s) 1713
BseMII CTCAG 3 cut(s) 552, 1002, 1340
BseNI ACTGG 4 cut(s) 241, 344, 491, 1757
BseRI GAGGAG 3 cut(s) 441, 1298, 1314
BseX3I CGGCCG 1 cut(s) 286
BseXI GCAGC 4 cut(s) 219, 294, 396, 1126
BsgI GTGCAG 2 cut(s) 218, 488
Bsh1285I CGRYCG 2 cut(s) 289, 471
BshFI GGCC 5 cut(s) 91, 288, 306, 1007, 1051
BshNI GGYRCC 1 cut(s) 869
BsiEI CGRYCG 2 cut(s) 289, 471
BsiHKAI GWGCWC 3 cut(s) 502, 600, 735
BsiSI CCGG 3 cut(s) 289, 399, 467
BslFI GGGAC 2 cut(s) 729, 1694
BslI CCNNNNNNNGG 2 cut(s) 592, 1282
BsmAI GTCTC 2 cut(s) 1391, 1728
BsmFI GGGAC 2 cut(s) 729, 1694
BsmI GAATGC 1 cut(s) 75
BsnI GGCC 5 cut(s) 91, 288, 306, 1007, 1051
Bsp119I TTCGAA 2 cut(s) 315, 823
Bsp1286I GDGCHC 4 cut(s) 502, 600, 735, 1269
Bsp1407I TGTACA 1 cut(s) 633
Bsp143I GATC 9 cut(s) 17, 187, 249, 291, 747, 1083, 1149, 1319, 1899
Bsp1720I GCTNAGC 1 cut(s) 1360
Bsp19I CCATGG 4 cut(s) 92, 873, 1087, 1181
BspACI CCGC 3 cut(s) 285, 1016, 1117
BspANI GGCC 5 cut(s) 91, 288, 306, 1007, 1051
BspCNI CTCAG 3 cut(s) 553, 1003, 1339
BspLI GGNNCC 3 cut(s) 132, 871, 1085
BspPI GGATC 7 cut(s) 257, 299, 755, 1078, 1091, 1144, 1894
BspT104I TTCGAA 2 cut(s) 315, 823
BspT107I GGYRCC 1 cut(s) 869
BspTI CTTAAG 1 cut(s) 770
BsrDI GCAATG 1 cut(s) 1713
BsrGI TGTACA 1 cut(s) 633
BsrI ACTGG 4 cut(s) 241, 344, 491, 1757
BssMI GATC 9 cut(s) 17, 187, 249, 291, 747, 1083, 1149, 1319, 1899
BssSI CACGAG 1 cut(s) 1741
BssT1I CCWWGG 8 cut(s) 92, 379, 873, 987, 1002, 1087, 1181, 1806
Bst2BI CACGAG 1 cut(s) 1741
Bst2UI CCWGG 4 cut(s) 26, 72, 136, 1277
Bst4CI ACNGT 3 cut(s) 46, 897, 1205
Bst6I CTCTTC 1 cut(s) 845
BstAFI CTTAAG 1 cut(s) 770
BstAUI TGTACA 1 cut(s) 633
BstBAI YACGTR 2 cut(s) 121, 394
BstBI TTCGAA 2 cut(s) 315, 823
BstC8I GCNNGC 2 cut(s) 389, 1803
BstDEI CTNAG 5 cut(s) 561, 1011, 1326, 1360, 1536
BstDSI CCRYGG 4 cut(s) 92, 873, 1087, 1181
BstF5I GGATG 4 cut(s) 234, 349, 1354, 1504
BstHHI GCGC 2 cut(s) 1778, 1785
BstKTI GATC 9 cut(s) 20, 190, 252, 294, 750, 1086, 1152, 1322, 1902
BstMAI GTCTC 2 cut(s) 1391, 1728
BstMBI GATC 9 cut(s) 17, 187, 249, 291, 747, 1083, 1149, 1319, 1899
BstMCI CGRYCG 2 cut(s) 289, 471
BstMWI GCNNNNNNNGC 4 cut(s) 137, 1004, 1470, 1782
BstNI CCWGG 4 cut(s) 26, 72, 136, 1277
BstNSI RCATGY 2 cut(s) 1039, 1805
BstSCI CCNGG 4 cut(s) 24, 70, 134, 1275
BstV1I GCAGC 4 cut(s) 219, 294, 396, 1126
BstV2I GAAGAC 2 cut(s) 186, 1614
BstX2I RGATCY 5 cut(s) 187, 249, 747, 1083, 1319
BstYI RGATCY 5 cut(s) 187, 249, 747, 1083, 1319
BstZI CGGCCG 1 cut(s) 286
BsuRI GGCC 5 cut(s) 91, 288, 306, 1007, 1051
BtgI CCRYGG 4 cut(s) 92, 873, 1087, 1181
BtsCI GGATG 4 cut(s) 234, 349, 1354, 1504
BtsI GCAGTG 1 cut(s) 718
BtsIMutI CAGTG 2 cut(s) 558, 718
Cac8I GCNNGC 2 cut(s) 389, 1803
CaiI CAGNNNCTG 1 cut(s) 1897
CfoI GCGC 2 cut(s) 1778, 1785
Cfr13I GGNCC 2 cut(s) 304, 464
Csp6I GTAC 4 cut(s) 118, 634, 796, 1033
CviQI GTAC 4 cut(s) 118, 634, 796, 1033
DdeI CTNAG 5 cut(s) 561, 1011, 1326, 1360, 1536
DpnI GATC 9 cut(s) 19, 189, 251, 293, 749, 1085, 1151, 1321, 1901
DpnII GATC 9 cut(s) 17, 187, 249, 291, 747, 1083, 1149, 1319, 1899
DriI GACNNNNNGTC 1 cut(s) 402
EaeI YGGCCR 2 cut(s) 89, 286
EagI CGGCCG 1 cut(s) 286
Eam1104I CTCTTC 1 cut(s) 845
Eam1105I GACNNNNNGTC 1 cut(s) 402
EarI CTCTTC 1 cut(s) 845
Ecl136II GAGCTC 2 cut(s) 500, 733
EclXI CGGCCG 1 cut(s) 286
Eco130I CCWWGG 8 cut(s) 92, 379, 873, 987, 1002, 1087, 1181, 1806
Eco24I GRGCYC 3 cut(s) 502, 735, 1269
Eco47I GGWCC 1 cut(s) 464
Eco52I CGGCCG 1 cut(s) 286
Eco53kI GAGCTC 2 cut(s) 500, 733
Eco72I CACGTG 1 cut(s) 394
EcoICRI GAGCTC 2 cut(s) 500, 733
EcoO109I RGGNCCY 1 cut(s) 304
EcoRII CCWGG 4 cut(s) 24, 70, 134, 1275
EcoT14I CCWWGG 8 cut(s) 92, 379, 873, 987, 1002, 1087, 1181, 1806
EcoT38I GRGCYC 3 cut(s) 502, 735, 1269
ErhI CCWWGG 8 cut(s) 92, 379, 873, 987, 1002, 1087, 1181, 1806
FalI AAGNNNNNCTT 4 cut(s) 1209, 1241, 1860, 1892
FaqI GGGAC 2 cut(s) 729, 1694
FblI GTMKAC 1 cut(s) 297
Fnu4HI GCNGC 6 cut(s) 233, 283, 286, 385, 1016, 1115
FokI GGATG 4 cut(s) 241, 356, 1361, 1511
FriOI GRGCYC 3 cut(s) 502, 735, 1269
Fsp4HI GCNGC 6 cut(s) 233, 283, 286, 385, 1016, 1115
FspBI CTAG 3 cut(s) 308, 380, 885
GlaI GCGC 2 cut(s) 1777, 1784
GluI GCNGC 6 cut(s) 233, 283, 286, 385, 1016, 1115
GsuI CTGGAG 2 cut(s) 915, 1686
HaeIII GGCC 5 cut(s) 91, 288, 306, 1007, 1051
HapII CCGG 3 cut(s) 289, 399, 467
HhaI GCGC 2 cut(s) 1778, 1785
Hin6I GCGC 2 cut(s) 1776, 1783
HinP1I GCGC 2 cut(s) 1776, 1783
HincII GTYRAC 3 cut(s) 298, 325, 648
HindII GTYRAC 3 cut(s) 298, 325, 648
HinfI GANTC 5 cut(s) 435, 902, 968, 1072, 1819
HpaII CCGG 3 cut(s) 289, 399, 467
HphI GGTGA 5 cut(s) 530, 575, 1292, 1507, 1780
Hpy166II GTNNAC 5 cut(s) 298, 325, 636, 648, 1738
Hpy188I TCNGA 7 cut(s) 22, 81, 1012, 1317, 1849, 1899, 1917
Hpy188III TCNNGA 3 cut(s) 261, 932, 1727
Hpy8I GTNNAC 5 cut(s) 298, 325, 636, 648, 1738
Hpy99I CGWCG 1 cut(s) 299
HpyAV CCTTC 3 cut(s) 1657, 1758, 1805
HpyCH4III ACNGT 3 cut(s) 46, 897, 1205
HpyCH4IV ACGT 3 cut(s) 120, 393, 1637
HpyF10VI GCNNNNNNNGC 4 cut(s) 137, 1004, 1470, 1782
HpyF3I CTNAG 5 cut(s) 561, 1011, 1326, 1360, 1536
HpySE526I ACGT 3 cut(s) 120, 393, 1637
HspAI GCGC 2 cut(s) 1776, 1783
Kzo9I GATC 9 cut(s) 17, 187, 249, 291, 747, 1083, 1149, 1319, 1899
LmnI GCTCC 4 cut(s) 136, 595, 934, 1285
Lsp1109I GCAGC 4 cut(s) 219, 294, 396, 1126
LweI GCATC 3 cut(s) 219, 817, 952
MaeI CTAG 3 cut(s) 308, 380, 885
MaeII ACGT 3 cut(s) 120, 393, 1637
MaeIII GTNAC 4 cut(s) 394, 556, 685, 1054
MalI GATC 9 cut(s) 19, 189, 251, 293, 749, 1085, 1151, 1321, 1901
MboI GATC 9 cut(s) 17, 187, 249, 291, 747, 1083, 1149, 1319, 1899
MboII GAAGA 6 cut(s) 191, 367, 742, 832, 897, 1619
MfeI CAATTG 1 cut(s) 1446
MflI RGATCY 5 cut(s) 187, 249, 747, 1083, 1319
MhlI GDGCHC 4 cut(s) 502, 600, 735, 1269
MlsI TGGCCA 1 cut(s) 91
MluCI AATT 8 cut(s) 351, 579, 742, 829, 1133, 1162, 1446, 1655
MluNI TGGCCA 1 cut(s) 91
MlyI GAGTC 1 cut(s) 962
MmeI TCCRAC 2 cut(s) 1796, 1872
Mox20I TGGCCA 1 cut(s) 91
MroXI GAANNNNTTC 1 cut(s) 658
MscI TGGCCA 1 cut(s) 91
MseI TTAA 9 cut(s) 33, 114, 168, 771, 1227, 1271, 1380, 1526, 1927
MslI CAYNNNNRTG 2 cut(s) 1100, 1830
Msp20I TGGCCA 1 cut(s) 91
MspA1I CMGCKG 3 cut(s) 285, 1117, 1330
MspCI CTTAAG 1 cut(s) 770
MspI CCGG 3 cut(s) 289, 399, 467
MspR9I CCNGG 4 cut(s) 26, 72, 136, 1277
MunI CAATTG 1 cut(s) 1446
Mva1269I GAATGC 1 cut(s) 75
MvaI CCWGG 4 cut(s) 26, 72, 136, 1277
MwoI GCNNNNNNNGC 4 cut(s) 137, 1004, 1470, 1782
NcoI CCATGG 4 cut(s) 92, 873, 1087, 1181
NdeII GATC 9 cut(s) 17, 187, 249, 291, 747, 1083, 1149, 1319, 1899
NlaIV GGNNCC 3 cut(s) 132, 871, 1085
NmeAIII GCCGAG 1 cut(s) 1785
NmuCI GTSAC 2 cut(s) 394, 556
NspI RCATGY 2 cut(s) 1039, 1805
NspV TTCGAA 2 cut(s) 315, 823
OliI CACNNNNGTG 1 cut(s) 1100
PaeI GCATGC 1 cut(s) 1805
PasI CCCWGGG 1 cut(s) 135
PciI ACATGT 1 cut(s) 1035
PctI GAATGC 1 cut(s) 75
PdmI GAANNNNTTC 1 cut(s) 658
PfeI GAWTC 4 cut(s) 435, 902, 1072, 1819
PkrI GCNGC 6 cut(s) 234, 284, 287, 386, 1017, 1116
PleI GAGTC 1 cut(s) 962
PmaCI CACGTG 1 cut(s) 394
PmlI CACGTG 1 cut(s) 394
PpsI GAGTC 1 cut(s) 962
Ppu21I YACGTR 2 cut(s) 121, 394
PscI ACATGT 1 cut(s) 1035
PsiI TTATAA 1 cut(s) 443
Psp124BI GAGCTC 2 cut(s) 502, 735
Psp1406I AACGTT 1 cut(s) 1637
Psp6I CCWGG 4 cut(s) 24, 70, 134, 1275
PspCI CACGTG 1 cut(s) 394
PspGI CCWGG 4 cut(s) 24, 70, 134, 1275
PspN4I GGNNCC 3 cut(s) 132, 871, 1085
PspPI GGNCC 2 cut(s) 304, 464
PstNI CAGNNNCTG 1 cut(s) 1897
PsuI RGATCY 5 cut(s) 187, 249, 747, 1083, 1319
PvuII CAGCTG 1 cut(s) 1330
RsaI GTAC 4 cut(s) 119, 635, 797, 1034
RsaNI GTAC 4 cut(s) 118, 634, 796, 1033
RseI CAYNNNNRTG 2 cut(s) 1100, 1830
SacI GAGCTC 2 cut(s) 502, 735
SalI GTCGAC 1 cut(s) 296
SaqAI TTAA 9 cut(s) 33, 114, 168, 771, 1227, 1271, 1380, 1526, 1927
SatI GCNGC 6 cut(s) 233, 283, 286, 385, 1016, 1115
Sau3AI GATC 9 cut(s) 17, 187, 249, 291, 747, 1083, 1149, 1319, 1899
Sau96I GGNCC 2 cut(s) 304, 464
SchI GAGTC 1 cut(s) 962
ScrFI CCNGG 4 cut(s) 26, 72, 136, 1277
SduI GDGCHC 4 cut(s) 502, 600, 735, 1269
SfaNI GCATC 3 cut(s) 219, 817, 952
SfuI TTCGAA 2 cut(s) 315, 823
SinI GGWCC 1 cut(s) 464
SmiMI CAYNNNNRTG 2 cut(s) 1100, 1830
SmlI CTYRAG 2 cut(s) 770, 1727
SmoI CTYRAG 2 cut(s) 770, 1727
SpeI ACTAGT 1 cut(s) 884
SphI GCATGC 1 cut(s) 1805
Sse9I AATT 8 cut(s) 351, 579, 742, 829, 1133, 1162, 1446, 1655
SsiI CCGC 3 cut(s) 285, 1016, 1117
SspI AATATT 1 cut(s) 1925
SspMI CTAG 3 cut(s) 308, 380, 885
SstI GAGCTC 2 cut(s) 502, 735
StyD4I CCNGG 4 cut(s) 24, 70, 134, 1275
StyI CCWWGG 8 cut(s) 92, 379, 873, 987, 1002, 1087, 1181, 1806
TaaI ACNGT 3 cut(s) 46, 897, 1205
TaiI ACGT 3 cut(s) 123, 396, 1640
TaqI TCGA 8 cut(s) 262, 297, 315, 406, 471, 729, 823, 1879
TasI AATT 8 cut(s) 351, 579, 742, 829, 1133, 1162, 1446, 1655
TatI WGTACW 1 cut(s) 633
TauI GCSGC 2 cut(s) 288, 1018
TfiI GAWTC 4 cut(s) 435, 902, 1072, 1819
Tru1I TTAA 9 cut(s) 33, 114, 168, 771, 1227, 1271, 1380, 1526, 1927
Tru9I TTAA 9 cut(s) 33, 114, 168, 771, 1227, 1271, 1380, 1526, 1927
TscAI CASTG 2 cut(s) 565, 725
TseFI GTSAC 2 cut(s) 394, 556
TseI GCWGC 4 cut(s) 232, 282, 384, 1114
Tsp45I GTSAC 2 cut(s) 394, 556
TspRI CASTG 2 cut(s) 565, 725
Vha464I CTTAAG 1 cut(s) 770
VpaK11BI GGWCC 1 cut(s) 464
XceI RCATGY 2 cut(s) 1039, 1805
XmaJI CCTAGG 1 cut(s) 379
XmiI GTMKAC 1 cut(s) 297
XmnI GAANNNNTTC 1 cut(s) 658
XspI CTAG 3 cut(s) 308, 380, 885
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.