FvH4_7g08570

Belongs to the sterol desaturase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0000300
Physical Location & Seq
Forward (+)
8423684 .. 8428454
4771 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g08570.t1

Sequence Viewer

Length: 1845 bp
ATGGCTTCTACACCCGGAATTCTTACTGACTGGCCATGGACACCTCTTGGGAGCTTTAAGTACGTGGTGTTAGCTCCTTGGGTGATTCACAGCACATACTCGTATATGTTTGGAGAAGAAGGTACGGATCTATTTTACATCCTCATACTTCCATTTCAGTTGTGGAGGATGCTTCACAACCAGATATGGATCTCACTTTCTCGCTATCAAACTGCAAGAGGCAAATCCATCATTGACAAGGGCCTCGAGTTCGAACAAGTCGACAGAGAAAGAGATTGGGATGATCAGATCATATTCAATGGAATGCTGTTCTACGTAGGCAGATGCATCCTGCTTCAGACTGACCTACAAATTTGGAGGGGAGATGGGTTGGTCATGACGATACTGCTTCATGCTGGTCCGGTCGAGTATCTCTACTACTGGTTACACAGAGCACTTCACCACCATTTCCTCTACTCTCGCTACCATTCTCATCACCATTCCTCCATTGTCACTGAGCCAATCACTTCTGTGACTCACCCATTTGCGGAGCACATATCATATTTCTTGCTCTTCGCAATACCAATGATCGGAACTCTGTTGATCGGAACGGCTTCCATCACATCCTATTTTGTTTATATCACTTATATCGACTTCATGAAAAATCTGGGACACTGCAATTTCGAGTTCATTCCCAACTGGATCTTCTCTCTTTTTCCTCCTCTTAAGTATCTCATGTATACTCCCTCGTACCACTCGTTGCATCACACACAATTTCGAACCAATTACTCCCTCTTCATGCCAATCTATGACTACATGTATGGTACCATGGACAAGTCTAGTGATTCACTACACGAATCTTCACTTATGAAAGAGGAGTCACCTGATGTCGTTCATCTTACACATTTAACATCAGCTAAATCCATCTACCGACTCCCACTGGCATTTGCTTCCTTGGCCTCTAATCCACGCACTTCTACATGGTACTTATGGCTGTTGTGGCCAGTGACATTATGCTCATTAATACTAACTCGGTTACTTGGCCGTTCATTTGTTATTGAGAGGCAGCGTTTTGATAAACACAGTCTACAAACTTGGGTTATTCCAAAATTCATTTTGCAGTACTCGCTCTCTTGGCAAAATGAAGCTATAAACAGATTCATTGAGGATGCCATACTTGAAGCTGAGCAAAAGGGTGTCAAAGTTATTAGTTTAGGTCTTCTTAATCAGGGTGAGGGGCTCAATAGTTATGGTGGTATATATGTCCAAAGGAATCTACGACTGAAGATCAAGGTGGTGGATGGAAGTAGCTTAGCTGTTGCTGTCATCCTTAACAGCATTCCGAAAGGAACAACCCAGGTTCTCCTTATAGGCAACCTCACAAAGGTTGCTTATGCCCTTGCCTTTTCTTTGTGCCAGAGGGATATTCAGGTAGTTACATCACACCAGGCTGAGTACTTGAAGCTCACCAAATCATTAAATGCCACAGAGGGTAAGGTGGTTCATGACAGAAGCTATGCTCAAAAGATTTGGTTGGTGGGAGATGGATTGAGTAAGAAAGAACAGTTGAGTGCACCAAAAGGAACAATATTTGTTCCCTTCTCTCAATTTCCACCAAAAAAGTTGCGCAGAGACTGCTTCTACCACTACACACCAGCAATGAAGATCCCCAAGTCTCTGGAGAATGTCTACTCTTGCGAGAACTGGTTGCCGAGGAGAGTGATGAGTGCGTGGCGTATAGCAGGAATAGTGCATGCAATGGAAGGTTGGAATGAGCACGAGTGTGGCTATACCATGTCCAACATTGACAAAGTTTGGCAAGCCACTCTTCGACATGGCTTTCAGCCTCTAATCTCCAAAGATTGA

Protein Analysis

615

Amino Acids

71.12

Weight (kDa)

8.77

Isoelectric Point (pI)

34.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FA_hydroxylase PF04116 134 - 269 1.2e-20 Fatty acid hydroxylase
CER1-like_C PF12076 447 - 609 1.2e-73 CER1-like, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000300)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G02190 AT1G02190 AT1G02205 AT1G02205 AT1G02205 AT1G02205 AT1G02205 AT2G37700 AT2G37700 AT2G37700 AT2G37700
fragaria_vesca FvH4_1g22160 FvH4_7g08560 FvH4_7g08560 FvH4_7g08560 FvH4_7g08570 FvH4_7g08570 FvH4_7g08590 FvH4_7g08590
malus_domestica MD02G1226900.v1.1 MD07G1083700.v1.1 MD07G1083800.v1.1 MD07G1086200.v1.1 MD07G1086300.v1.1 MD07G1086700.v1.1 MD13G1075600.v1.1
prunus_persica Prupe.2G112600_v2.0.a1 Prupe.2G112800_v2.0.a1 Prupe.2G113000_v2.0.a1 Prupe.2G113500_v2.0.a1 Prupe.2G113600_v2.0.a1
pyrus_communis pycom02g19600 pycom02g19610 pycom07g06920 pycom07g06930
rosa_chinensis RchiOBHm_Chr1g0343261 RchiOBHm_Chr1g0343301 RchiOBHm_Chr1g0343371 RchiOBHm_Chr1g0343431 RchiOBHm_Chr1g0343441 RchiOBHm_Chr1g0343521 RchiOBHm_Chr1g0343691 RchiOBHm_Chr1g0343791
rosa_laevigata RLG00000028951 RLG00000028953 RLG00000028965 RLG00000028968 RLG00000028969 RLG00000028971 RLG00000028972 RLG00000028974 RLG00000029891
rosa_multiflora Rmu_sc0000021.1_g000002 Rmu_sc0000335.1_g000046 Rmu_sc0000335.1_g000047 Rmu_sc0000335.1_g000058 Rmu_sc0000335.1_g000061 Rmu_sc0000335.1_g000106 Rmu_sc0000335.1_g000125 Rmu_sc0000544.1_g000010 Rmu_sc0003430.1_g000012 Rmu_sc0005796.1_g000004 Rmu_sc0028268.1_g000001 Rmu_ssc0000259.1_g000038
rosa_roxburghii Rroxscaffold_2G00110090 Rroxscaffold_4G00310350 Rroxscaffold_4G00310610 Rroxscaffold_4G00310710 Rroxscaffold_4G00310740 Rroxscaffold_4G00310760 Rroxscaffold_4G00321110
rosa_rugosa Rorug01G0080100 Rorug01G0080200 Rorug01G0166400 Rorug01G0166500 Rorug01G0166500 Rorug01G0166600 Rorug01G0166700 Rorug01G0166800 Rorug01G0168400 Rorug01G0168500 Rorug01G0168800 Rorug03G0241300 Rorug03G0241400 Rorug04G0001200 Rorug06G0031500 Rorug06G0073200 Rorug06G0264000
rosa_samantha Rh1AG098100 Rh1AG181800 Rh1AG182100 Rh1AG182400 Rh1AG183000 Rh1AG183600 Rh1AG184300 Rh1AG185400 Rh1BG104000 Rh1BG150000 Rh1BG150400 Rh1BG152100 Rh1BG152300 Rh1CG168600 Rh1CG168900 Rh1CG169000 Rh1CG169700 Rh1CG170500 Rh1CG171200 Rh1DG182000 Rh1DG182300 Rh1DG184000 Rh1DG184200
rosa_wichuraiana Rw0G012940 Rw1G007640 Rw1G007670 Rw1G011320 Rw1G015090 Rw1G015110 Rw1G015130 Rw1G015150 Rw1G015290

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1607
Acc65I GGTACC 1 cut(s) 803
AccB1I GGYRCC 1 cut(s) 803
AccI GTMKAC 4 cut(s) 261, 719, 1066, 1668
AciI CCGC 1 cut(s) 527
AclWI GGATC 4 cut(s) 135, 197, 689, 1639
AcoI YGGCCR 3 cut(s) 32, 980, 1021
AcsI RAATTY 3 cut(s) 18, 351, 1088
AcuI CTGAAG 2 cut(s) 320, 1283
AfaI GTAC 7 cut(s) 62, 124, 731, 805, 965, 1103, 1436
AfiI CCNNNNNNNGG 3 cut(s) 526, 569, 1363
AflII CTTAAG 1 cut(s) 704
AflIII ACRYGT 1 cut(s) 795
AgsI TTSAA 3 cut(s) 298, 1160, 1441
AjnI CCWGG 2 cut(s) 1335, 1425
AjuI GAANNNNNNNTTGG 2 cut(s) 668, 700
AleI CACNNNNGTG 2 cut(s) 509, 1761
AluBI AGCT 9 cut(s) 54, 74, 896, 1127, 1163, 1290, 1295, 1444, 1494
AluI AGCT 9 cut(s) 54, 74, 896, 1127, 1163, 1290, 1295, 1444, 1494
Alw21I GWGCWC 4 cut(s) 436, 534, 1555, 1758
Alw26I GTCTC 2 cut(s) 1605, 1659
Alw44I GTGCAC 1 cut(s) 1551
AlwI GGATC 4 cut(s) 135, 197, 689, 1639
AlwNI CAGNNNCTG 1 cut(s) 1614
Ama87I CYCGRG 1 cut(s) 245
AoxI GGCC 5 cut(s) 32, 241, 936, 980, 1021
ApaLI GTGCAC 1 cut(s) 1551
ApeKI GCWGC 1 cut(s) 1045
ApoI RAATTY 3 cut(s) 18, 351, 1088
AseI ATTAAT 1 cut(s) 1001
Asp700I GAANNNNTTC 1 cut(s) 592
Asp718I GGTACC 1 cut(s) 803
AspLEI GCGC 1 cut(s) 1608
AspS9I GGNCC 2 cut(s) 241, 398
AsuC2I CCSGG 1 cut(s) 15
AsuHPI GGTGA 7 cut(s) 94, 431, 467, 509, 852, 1223, 1438
AsuII TTCGAA 2 cut(s) 252, 757
AvaI CYCGRG 1 cut(s) 245
AvaII GGWCC 1 cut(s) 398
BaeGI GKGCMC 1 cut(s) 1555
BalI TGGCCA 2 cut(s) 34, 982
BanI GGYRCC 1 cut(s) 803
BanII GRGCYC 1 cut(s) 1221
BauI CACGAG 1 cut(s) 1757
BbsI GAAGAC 1 cut(s) 1190
Bbv12I GWGCWC 4 cut(s) 436, 534, 1555, 1758
BbvI GCAGC 1 cut(s) 1057
BccI CCATC 6 cut(s) 236, 359, 605, 911, 1274, 1517
BceAI ACGGC 2 cut(s) 606, 1008
BciT130I CCWGG 2 cut(s) 1337, 1427
BclI TGATCA 1 cut(s) 283
BcnI CCSGG 1 cut(s) 15
BcoDI GTCTC 2 cut(s) 1605, 1659
BfaI CTAG 1 cut(s) 819
BfrI CTTAAG 1 cut(s) 704
BisI GCNGC 1 cut(s) 1046
BlpI GCTNAGC 2 cut(s) 1164, 1291
BlsI GCNGC 1 cut(s) 1047
BmcAI AGTACT 2 cut(s) 1103, 1436
Bme1390I CCNGG 3 cut(s) 15, 1337, 1427
Bme18I GGWCC 1 cut(s) 398
BmeT110I CYCGRG 1 cut(s) 245
BmgT120I GGNCC 2 cut(s) 241, 398
BmiI GGNNCC 1 cut(s) 805
BmrFI CCNGG 3 cut(s) 15, 1337, 1427
BmsI GCATC 5 cut(s) 159, 314, 336, 751, 1138
BpiI GAAGAC 1 cut(s) 1190
BpmI CTGGAG 1 cut(s) 1679
Bpu1102I GCTNAGC 2 cut(s) 1164, 1291
Bpu14I TTCGAA 2 cut(s) 252, 757
BpuMI CCSGG 1 cut(s) 15
BsaAI YACGTR 2 cut(s) 64, 316
BsaBI GATNNNNATC 1 cut(s) 188
BsaJI CCNNGG 6 cut(s) 35, 77, 807, 933, 1335, 1691
BsaWI WCCGGW 1 cut(s) 400
BsaXI ACNNNNNCTCC 2 cut(s) 467, 497
Bsc4I CCNNNNNNNGG 3 cut(s) 526, 569, 1363
Bse1I ACTGG 6 cut(s) 35, 425, 683, 924, 983, 1688
Bse3DI GCAATG 2 cut(s) 1644, 1743
Bse8I GATNNNNATC 1 cut(s) 188
BseBI CCWGG 2 cut(s) 1337, 1427
BseDI CCNNGG 6 cut(s) 35, 77, 807, 933, 1335, 1691
BseGI GGATG 8 cut(s) 138, 174, 286, 327, 602, 1153, 1285, 1305
BseJI GATNNNNATC 1 cut(s) 188
BseLI CCNNNNNNNGG 3 cut(s) 526, 569, 1363
BseMI GCAATG 2 cut(s) 1644, 1743
BseMII CTCAG 3 cut(s) 486, 1155, 1422
BseNI ACTGG 6 cut(s) 35, 425, 683, 924, 983, 1688
BseRI GAGGAG 3 cut(s) 690, 869, 1708
BseSI GKGCMC 1 cut(s) 1555
BseXI GCAGC 1 cut(s) 1057
Bsh1285I CGRYCG 1 cut(s) 405
BshFI GGCC 5 cut(s) 34, 243, 938, 982, 1023
BshNI GGYRCC 1 cut(s) 803
BsiEI CGRYCG 1 cut(s) 405
BsiHKAI GWGCWC 4 cut(s) 436, 534, 1555, 1758
BsiHKCI CYCGRG 1 cut(s) 245
BsiSI CCGG 2 cut(s) 15, 401
BslFI GGGAC 1 cut(s) 663
BslI CCNNNNNNNGG 3 cut(s) 526, 569, 1363
BsmAI GTCTC 2 cut(s) 1605, 1659
BsmFI GGGAC 1 cut(s) 663
BsmI GAATGC 2 cut(s) 309, 1317
BsnI GGCC 5 cut(s) 34, 243, 938, 982, 1023
BsoBI CYCGRG 1 cut(s) 245
Bsp119I TTCGAA 2 cut(s) 252, 757
Bsp1286I GDGCHC 5 cut(s) 436, 534, 1221, 1555, 1758
Bsp143I GATC 9 cut(s) 127, 189, 283, 288, 567, 582, 681, 1266, 1644
Bsp1720I GCTNAGC 2 cut(s) 1164, 1291
Bsp19I CCATGG 2 cut(s) 35, 807
BspACI CCGC 1 cut(s) 527
BspANI GGCC 5 cut(s) 34, 243, 938, 982, 1023
BspCNI CTCAG 3 cut(s) 487, 1156, 1423
BspHI TCATGA 3 cut(s) 375, 636, 1483
BspLI GGNNCC 1 cut(s) 805
BspPI GGATC 4 cut(s) 135, 197, 689, 1639
BspQI GCTCTTC 1 cut(s) 557
BspT104I TTCGAA 2 cut(s) 252, 757
BspT107I GGYRCC 1 cut(s) 803
BspTI CTTAAG 1 cut(s) 704
BsrDI GCAATG 2 cut(s) 1644, 1743
BsrI ACTGG 6 cut(s) 35, 425, 683, 924, 983, 1688
BssECI CCNNGG 6 cut(s) 35, 77, 807, 933, 1335, 1691
BssMI GATC 9 cut(s) 127, 189, 283, 288, 567, 582, 681, 1266, 1644
BssNAI GTATAC 1 cut(s) 720
BssSI CACGAG 1 cut(s) 1757
BssT1I CCWWGG 4 cut(s) 35, 77, 807, 933
Bst1107I GTATAC 1 cut(s) 720
Bst2BI CACGAG 1 cut(s) 1757
Bst2UI CCWGG 2 cut(s) 1337, 1427
Bst4CI ACNGT 2 cut(s) 1064, 1545
Bst6I CTCTTC 3 cut(s) 557, 779, 1812
BstAFI CTTAAG 1 cut(s) 704
BstAPI GCANNNNNTGC 1 cut(s) 1614
BstBAI YACGTR 2 cut(s) 64, 316
BstBI TTCGAA 2 cut(s) 252, 757
BstC8I GCNNGC 2 cut(s) 1734, 1800
BstDEI CTNAG 4 cut(s) 495, 1164, 1291, 1431
BstDSI CCRYGG 2 cut(s) 35, 807
BstENI CCTNNNNNAGG 1 cut(s) 1361
BstF5I GGATG 8 cut(s) 138, 174, 286, 327, 602, 1153, 1285, 1305
BstHHI GCGC 1 cut(s) 1608
BstKTI GATC 9 cut(s) 130, 192, 286, 291, 570, 585, 684, 1269, 1647
BstMAI GTCTC 2 cut(s) 1605, 1659
BstMBI GATC 9 cut(s) 127, 189, 283, 288, 567, 582, 681, 1266, 1644
BstMCI CGRYCG 1 cut(s) 405
BstMWI GCNNNNNNNGC 5 cut(s) 935, 979, 1105, 1114, 1614
BstNI CCWGG 2 cut(s) 1337, 1427
BstNSI RCATGY 2 cut(s) 799, 1736
BstSCI CCNGG 3 cut(s) 13, 1335, 1425
BstSLI GKGCMC 1 cut(s) 1555
BstSNI TACGTA 1 cut(s) 316
BstV1I GCAGC 1 cut(s) 1057
BstV2I GAAGAC 1 cut(s) 1190
BstX2I RGATCY 4 cut(s) 127, 189, 681, 1644
BstXI CCANNNNNNTGG 1 cut(s) 1657
BstYI RGATCY 4 cut(s) 127, 189, 681, 1644
BstZ17I GTATAC 1 cut(s) 720
BsuRI GGCC 5 cut(s) 34, 243, 938, 982, 1023
BtgI CCRYGG 2 cut(s) 35, 807
BtsCI GGATG 8 cut(s) 138, 174, 286, 327, 602, 1153, 1285, 1305
BtsI GCAGTG 1 cut(s) 652
BtsIMutI CAGTG 4 cut(s) 492, 652, 917, 990
Cac8I GCNNGC 2 cut(s) 1734, 1800
CaiI CAGNNNCTG 1 cut(s) 1614
CciI TCATGA 3 cut(s) 375, 636, 1483
CfoI GCGC 1 cut(s) 1608
Cfr13I GGNCC 2 cut(s) 241, 398
Csp6I GTAC 7 cut(s) 61, 123, 730, 804, 964, 1102, 1435
CviQI GTAC 7 cut(s) 61, 123, 730, 804, 964, 1102, 1435
DdeI CTNAG 4 cut(s) 495, 1164, 1291, 1431
DpnI GATC 9 cut(s) 129, 191, 285, 290, 569, 584, 683, 1268, 1646
DpnII GATC 9 cut(s) 127, 189, 283, 288, 567, 582, 681, 1266, 1644
EaeI YGGCCR 3 cut(s) 32, 980, 1021
Eam1104I CTCTTC 3 cut(s) 557, 779, 1812
EarI CTCTTC 3 cut(s) 557, 779, 1812
Eco105I TACGTA 1 cut(s) 316
Eco130I CCWWGG 4 cut(s) 35, 77, 807, 933
Eco24I GRGCYC 1 cut(s) 1221
Eco47I GGWCC 1 cut(s) 398
Eco57I CTGAAG 2 cut(s) 320, 1283
Eco88I CYCGRG 1 cut(s) 245
EcoNI CCTNNNNNAGG 1 cut(s) 1361
EcoO109I RGGNCCY 1 cut(s) 241
EcoRI GAATTC 1 cut(s) 18
EcoRII CCWGG 2 cut(s) 1335, 1425
EcoT14I CCWWGG 4 cut(s) 35, 77, 807, 933
EcoT22I ATGCAT 1 cut(s) 329
EcoT38I GRGCYC 1 cut(s) 1221
ErhI CCWWGG 4 cut(s) 35, 77, 807, 933
FalI AAGNNNNNCTT 2 cut(s) 1791, 1823
FaqI GGGAC 1 cut(s) 663
FbaI TGATCA 1 cut(s) 283
FblI GTMKAC 4 cut(s) 261, 719, 1066, 1668
Fnu4HI GCNGC 1 cut(s) 1046
FokI GGATG 8 cut(s) 125, 181, 293, 314, 589, 1160, 1292, 1292
FriOI GRGCYC 1 cut(s) 1221
Fsp4HI GCNGC 1 cut(s) 1046
FspBI CTAG 1 cut(s) 819
FspI TGCGCA 1 cut(s) 1607
GlaI GCGC 1 cut(s) 1607
GluI GCNGC 1 cut(s) 1046
GsuI CTGGAG 1 cut(s) 1679
HaeIII GGCC 5 cut(s) 34, 243, 938, 982, 1023
HapII CCGG 2 cut(s) 15, 401
HhaI GCGC 1 cut(s) 1608
Hin6I GCGC 1 cut(s) 1606
HinP1I GCGC 1 cut(s) 1606
HincII GTYRAC 1 cut(s) 262
HindII GTYRAC 1 cut(s) 262
HinfI GANTC 8 cut(s) 85, 514, 824, 836, 857, 912, 1137, 1252
HpaII CCGG 2 cut(s) 15, 401
HphI GGTGA 7 cut(s) 94, 431, 467, 509, 852, 1223, 1438
Hpy166II GTNNAC 5 cut(s) 262, 720, 1067, 1553, 1669
Hpy188I TCNGA 5 cut(s) 288, 339, 572, 587, 1323
Hpy188III TCNNGA 4 cut(s) 376, 637, 1484, 1658
Hpy8I GTNNAC 5 cut(s) 262, 720, 1067, 1553, 1669
HpyAV CCTTC 3 cut(s) 113, 1588, 1736
HpyCH4III ACNGT 2 cut(s) 1064, 1545
HpyCH4IV ACGT 2 cut(s) 63, 315
HpyCH4V TGCA 8 cut(s) 215, 327, 657, 742, 1099, 1553, 1732, 1736
HpyF10VI GCNNNNNNNGC 5 cut(s) 935, 979, 1105, 1114, 1614
HpyF3I CTNAG 4 cut(s) 495, 1164, 1291, 1431
HpySE526I ACGT 2 cut(s) 63, 315
HspAI GCGC 1 cut(s) 1606
KpnI GGTACC 1 cut(s) 807
Ksp22I TGATCA 1 cut(s) 283
Kzo9I GATC 9 cut(s) 127, 189, 283, 288, 567, 582, 681, 1266, 1644
LguI GCTCTTC 1 cut(s) 557
LmnI GCTCC 3 cut(s) 51, 79, 529
Lsp1109I GCAGC 1 cut(s) 1057
LweI GCATC 5 cut(s) 159, 314, 336, 751, 1138
MaeI CTAG 1 cut(s) 819
MaeII ACGT 2 cut(s) 63, 315
MaeIII GTNAC 7 cut(s) 423, 490, 511, 858, 985, 1014, 1414
MalI GATC 9 cut(s) 129, 191, 285, 290, 569, 584, 683, 1268, 1646
MboI GATC 9 cut(s) 127, 189, 283, 288, 567, 582, 681, 1266, 1644
MboII GAAGA 9 cut(s) 128, 544, 676, 766, 831, 1190, 1276, 1654, 1799
MflI RGATCY 4 cut(s) 127, 189, 681, 1644
MhlI GDGCHC 5 cut(s) 436, 534, 1221, 1555, 1758
MlsI TGGCCA 2 cut(s) 34, 982
MluCI AATT 7 cut(s) 18, 351, 658, 752, 763, 1088, 1586
MluNI TGGCCA 2 cut(s) 34, 982
MlyI GAGTC 3 cut(s) 508, 866, 906
MmeI TCCRAC 2 cut(s) 1727, 1803
Mox20I TGGCCA 2 cut(s) 34, 982
Mph1103I ATGCAT 1 cut(s) 329
MroXI GAANNNNTTC 1 cut(s) 592
MscI TGGCCA 2 cut(s) 34, 982
MseI TTAA 7 cut(s) 57, 705, 887, 1001, 1203, 1311, 1457
MslI CAYNNNNRTG 2 cut(s) 509, 1761
Msp20I TGGCCA 2 cut(s) 34, 982
MspCI CTTAAG 1 cut(s) 704
MspI CCGG 2 cut(s) 15, 401
MspR9I CCNGG 3 cut(s) 15, 1337, 1427
Mva1269I GAATGC 2 cut(s) 309, 1317
MvaI CCWGG 2 cut(s) 1337, 1427
MwoI GCNNNNNNNGC 5 cut(s) 935, 979, 1105, 1114, 1614
NciI CCSGG 1 cut(s) 15
NcoI CCATGG 2 cut(s) 35, 807
NdeII GATC 9 cut(s) 127, 189, 283, 288, 567, 582, 681, 1266, 1644
NlaIV GGNNCC 1 cut(s) 805
NmeAIII GCCGAG 1 cut(s) 1716
NmuCI GTSAC 4 cut(s) 490, 511, 858, 985
NsbI TGCGCA 1 cut(s) 1607
NsiI ATGCAT 1 cut(s) 329
NspI RCATGY 2 cut(s) 799, 1736
NspV TTCGAA 2 cut(s) 252, 757
OliI CACNNNNGTG 2 cut(s) 509, 1761
PaeI GCATGC 1 cut(s) 1736
PaeR7I CTCGAG 1 cut(s) 245
PagI TCATGA 3 cut(s) 375, 636, 1483
PciI ACATGT 1 cut(s) 795
PciSI GCTCTTC 1 cut(s) 557
PcsI WCGNNNNNNNCGW 2 cut(s) 258, 734
PctI GAATGC 2 cut(s) 309, 1317
PdmI GAANNNNTTC 1 cut(s) 592
PfeI GAWTC 5 cut(s) 85, 824, 836, 1137, 1252
PkrI GCNGC 1 cut(s) 1047
PleI GAGTC 3 cut(s) 508, 865, 906
PpsI GAGTC 3 cut(s) 508, 865, 906
Ppu21I YACGTR 2 cut(s) 64, 316
PscI ACATGT 1 cut(s) 795
PshBI ATTAAT 1 cut(s) 1001
Psp6I CCWGG 2 cut(s) 1335, 1425
PspGI CCWGG 2 cut(s) 1335, 1425
PspN4I GGNNCC 1 cut(s) 805
PspPI GGNCC 2 cut(s) 241, 398
PspXI VCTCGAGB 1 cut(s) 245
PstNI CAGNNNCTG 1 cut(s) 1614
PsuI RGATCY 4 cut(s) 127, 189, 681, 1644
RsaI GTAC 7 cut(s) 62, 124, 731, 805, 965, 1103, 1436
RsaNI GTAC 7 cut(s) 61, 123, 730, 804, 964, 1102, 1435
RseI CAYNNNNRTG 2 cut(s) 509, 1761
SalI GTCGAC 1 cut(s) 260
SapI GCTCTTC 1 cut(s) 557
SaqAI TTAA 7 cut(s) 57, 705, 887, 1001, 1203, 1311, 1457
SatI GCNGC 1 cut(s) 1046
Sau3AI GATC 9 cut(s) 127, 189, 283, 288, 567, 582, 681, 1266, 1644
Sau96I GGNCC 2 cut(s) 241, 398
ScaI AGTACT 2 cut(s) 1103, 1436
SchI GAGTC 3 cut(s) 508, 866, 906
ScrFI CCNGG 3 cut(s) 15, 1337, 1427
SduI GDGCHC 5 cut(s) 436, 534, 1221, 1555, 1758
SfaNI GCATC 5 cut(s) 159, 314, 336, 751, 1138
Sfr274I CTCGAG 1 cut(s) 245
SfuI TTCGAA 2 cut(s) 252, 757
SinI GGWCC 1 cut(s) 398
SlaI CTCGAG 1 cut(s) 245
SmiMI CAYNNNNRTG 2 cut(s) 509, 1761
SmlI CTYRAG 2 cut(s) 245, 704
SmoI CTYRAG 2 cut(s) 245, 704
SnaBI TACGTA 1 cut(s) 316
SphI GCATGC 1 cut(s) 1736
Sse9I AATT 7 cut(s) 18, 351, 658, 752, 763, 1088, 1586
SsiI CCGC 1 cut(s) 527
SspI AATATT 1 cut(s) 1569
SspMI CTAG 1 cut(s) 819
StyD4I CCNGG 3 cut(s) 13, 1335, 1425
StyI CCWWGG 4 cut(s) 35, 77, 807, 933
TaaI ACNGT 2 cut(s) 1064, 1545
TaiI ACGT 2 cut(s) 66, 318
TaqI TCGA 8 cut(s) 246, 252, 261, 405, 630, 663, 757, 1810
TasI AATT 7 cut(s) 18, 351, 658, 752, 763, 1088, 1586
TatI WGTACW 2 cut(s) 1101, 1434
TfiI GAWTC 5 cut(s) 85, 824, 836, 1137, 1252
Tru1I TTAA 7 cut(s) 57, 705, 887, 1001, 1203, 1311, 1457
Tru9I TTAA 7 cut(s) 57, 705, 887, 1001, 1203, 1311, 1457
TscAI CASTG 4 cut(s) 499, 659, 924, 990
TseFI GTSAC 4 cut(s) 490, 511, 858, 985
TseI GCWGC 1 cut(s) 1045
Tsp45I GTSAC 4 cut(s) 490, 511, 858, 985
TspGWI ACGGA 1 cut(s) 140
TspRI CASTG 4 cut(s) 499, 659, 924, 990
Vha464I CTTAAG 1 cut(s) 704
VneI GTGCAC 1 cut(s) 1551
VpaK11BI GGWCC 1 cut(s) 398
VspI ATTAAT 1 cut(s) 1001
XagI CCTNNNNNAGG 1 cut(s) 1361
XapI RAATTY 3 cut(s) 18, 351, 1088
XceI RCATGY 2 cut(s) 799, 1736
XcmI CCANNNNNNNNNTGG 1 cut(s) 159
XhoI CTCGAG 1 cut(s) 245
XmiI GTMKAC 4 cut(s) 261, 719, 1066, 1668
XmnI GAANNNNTTC 1 cut(s) 592
XspI CTAG 1 cut(s) 819
ZrmI AGTACT 2 cut(s) 1103, 1436
Zsp2I ATGCAT 1 cut(s) 329
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.