Rh1BG150000

Belongs to the sterol desaturase family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1B
Physical Location & Seq
Forward (+)
24473415 .. 24479675
6261 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1BG150000.1

Sequence Viewer

Length: 1650 bp
ATGTGGAGAGAGATTAAGATGATTCTTTTGGGTTTAAATTTTGATTATTTCAGGGATGACCAGATAATATTCAACGGAATATTGTTCTACCTAGGCAGCAGGCACCTGCCTGAGGCTCAAAACCTACCATTGTGGAGGGGAGATGGGTTCGTTATGACGTTTCTGATTCATGCCGGTCCGGTGGAGTTTCTCTACTACTGGCTTCACAGAGCTCTTCACCACCATTTCCTCTACTCTCGCTACCATTCCCACCACCATTCCTCCATTGTCACCGAGCCTATTACTTCTGTGATTCACCCTTTTGCGGAACACATAGCATATTTCATCCTCTTCGCAATACCAATGGTGACAATGGCGGTTACGGGGACAGGTTCAGTCGGATCATATTTGATTTATATTACTTATATTGACTTAATGAACAACATGGGGCACTGCAATTTCGAGCTCATTCCCAACTGGATATTTTCTATTTTTCCTCCTCTTAAGTACCTCATGTACACTCCCTCGTTTCACTCTCTTCACCACACACAATTCCGAACCAATTACTCCCTCTTCATGCCCATCTACGACTACATATACGGCACTATGGACAAGTCTACCGATTCTCTGTATGAATCTTCGCTCAAAAGAGAGGAGGAATCGCCCGATGTGTTGCATCTAACCCATCTAACAACCCCTGAATCCATATATCAACTACCTGTAGGGTTTGCTTCCTTGGCCTCTAAGCCACACACTTCAACGTGGTACTTATGGTTGATGTGGCCAGTCACACTGTGGTCTATGCTGCTCACTTGGATTTACGGCCGAACTTTTGTGGTTGAGAGGCAGCGCTTTGAGAAACTTAAATTGCAAACTTGGGCTATACCGAAATACAGTTTGCAGTACTTCTTGGAATGGCAAAACGAAGCTATCAACGGCTTGATTGAGGAAGCTATACTTGAAGCTGAGGAAAAGGGTGTCAAAGTTTTAAGTTTAGGTCTCTTGAATCAGAGTGAGGAGCTGAATAGATACGGTGGCCTCTATGTTCACAGGAATCCACAGCTGAAAATCAAGGTTGTGGATGGAAGTAGCTTAGCTGTGGCTGTCATCCTCAACAGCATTCCGAAAGGGACAACCCAAGTTCTTCTTAGAGGCAACCTCACTAAGGTTGCTTATGCCCTTGCATTTTCGTTGTGCCAGAGGGGAATCCAGGTAGCTACACTACACCAGTCTGATTATTTGAAGCTCACCAAATCATTCAATGCTACTGAGAGTAAGTTGGTTCTTGCAAAGAGCTGTGCTGCAAAGATCTGGTTAGTGGGAGATGGACTGAGTAAAGAAGAACAGTTGAATGCACCAAAAGGAACTATATTTGTTCCCTTCTCCCAAATTCCACCGAAAAAATTGCGCGCAGACTGCAACTACCACTGCACTCCAGCCATGAAGACTCCTACGTCACTTGAGAACATTTACTCTTGTGAGAACTGGTTACCAAGAAGGGTGATGAGTGCGTGGCGCATTGCCGCAATAGTGCATGCCTTGGAAGGTTGGAATGAGCACGAGTGCGGTTACACCATGTCTGACATTAACAAAGTTTGGCAAGCAACTCTTCGACATGGCTTCCAACCTCTGACCACCACGGCCACTACTCAGACCAGATTAAATCAGTAA

Protein Analysis

549

Amino Acids

63.32

Weight (kDa)

8.05

Isoelectric Point (pI)

35.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FA_hydroxylase PF04116 58 - 195 1.5e-21 Fatty acid hydroxylase
CER1-like_C PF12076 374 - 536 4.3e-72 CER1-like, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000300)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G02190 AT1G02190 AT1G02205 AT1G02205 AT1G02205 AT1G02205 AT1G02205 AT2G37700 AT2G37700 AT2G37700 AT2G37700
fragaria_vesca FvH4_1g22160 FvH4_7g08560 FvH4_7g08560 FvH4_7g08560 FvH4_7g08570 FvH4_7g08570 FvH4_7g08590 FvH4_7g08590
malus_domestica MD02G1226900.v1.1 MD07G1083700.v1.1 MD07G1083800.v1.1 MD07G1086200.v1.1 MD07G1086300.v1.1 MD07G1086700.v1.1 MD13G1075600.v1.1
prunus_persica Prupe.2G112600_v2.0.a1 Prupe.2G112800_v2.0.a1 Prupe.2G113000_v2.0.a1 Prupe.2G113500_v2.0.a1 Prupe.2G113600_v2.0.a1
pyrus_communis pycom02g19600 pycom02g19610 pycom07g06920 pycom07g06930
rosa_chinensis RchiOBHm_Chr1g0343261 RchiOBHm_Chr1g0343301 RchiOBHm_Chr1g0343371 RchiOBHm_Chr1g0343431 RchiOBHm_Chr1g0343441 RchiOBHm_Chr1g0343521 RchiOBHm_Chr1g0343691 RchiOBHm_Chr1g0343791
rosa_laevigata RLG00000028951 RLG00000028953 RLG00000028965 RLG00000028968 RLG00000028969 RLG00000028971 RLG00000028972 RLG00000028974 RLG00000029891
rosa_multiflora Rmu_sc0000021.1_g000002 Rmu_sc0000335.1_g000046 Rmu_sc0000335.1_g000047 Rmu_sc0000335.1_g000058 Rmu_sc0000335.1_g000061 Rmu_sc0000335.1_g000106 Rmu_sc0000335.1_g000125 Rmu_sc0000544.1_g000010 Rmu_sc0003430.1_g000012 Rmu_sc0005796.1_g000004 Rmu_sc0028268.1_g000001 Rmu_ssc0000259.1_g000038
rosa_roxburghii Rroxscaffold_2G00110090 Rroxscaffold_4G00310350 Rroxscaffold_4G00310610 Rroxscaffold_4G00310710 Rroxscaffold_4G00310740 Rroxscaffold_4G00310760 Rroxscaffold_4G00321110
rosa_rugosa Rorug01G0080100 Rorug01G0080200 Rorug01G0166400 Rorug01G0166500 Rorug01G0166500 Rorug01G0166600 Rorug01G0166700 Rorug01G0166800 Rorug01G0168400 Rorug01G0168500 Rorug01G0168800 Rorug03G0241300 Rorug03G0241400 Rorug04G0001200 Rorug06G0031500 Rorug06G0073200 Rorug06G0264000
rosa_samantha Rh1AG098100 Rh1AG181800 Rh1AG182100 Rh1AG182400 Rh1AG183000 Rh1AG183600 Rh1AG184300 Rh1AG185400 Rh1BG104000 Rh1BG150000 Rh1BG150400 Rh1BG152100 Rh1BG152300 Rh1CG168600 Rh1CG168900 Rh1CG169000 Rh1CG169700 Rh1CG170500 Rh1CG171200 Rh1DG182000 Rh1DG182300 Rh1DG184000 Rh1DG184200
rosa_wichuraiana Rw0G012940 Rw1G007640 Rw1G007670 Rw1G011320 Rw1G015090 Rw1G015110 Rw1G015130 Rw1G015150 Rw1G015290

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 114
AasI GACNNNNNNGTC 1 cut(s) 1432
Acc36I ACCTGC 1 cut(s) 114
AccB1I GGYRCC 1 cut(s) 102
AccI GTMKAC 1 cut(s) 596
AccII CGCG 1 cut(s) 1389
AciI CCGC 4 cut(s) 305, 356, 1503, 1545
AclWI GGATC 1 cut(s) 388
AcoI YGGCCR 3 cut(s) 761, 802, 1620
AcsI RAATTY 2 cut(s) 37, 1368
AdeI CACNNNGTG 1 cut(s) 774
AfaI GTAC 4 cut(s) 488, 497, 746, 884
AfeI AGCGCT 1 cut(s) 830
AfiI CCNNNNNNNGG 3 cut(s) 112, 304, 1144
AflII CTTAAG 1 cut(s) 482
AgsI TTSAA 7 cut(s) 73, 738, 941, 985, 1222, 1240, 1330
AjnI CCWGG 1 cut(s) 1188
Alw21I GWGCWC 3 cut(s) 214, 447, 1539
Alw26I GTCTC 1 cut(s) 983
AlwI GGATC 1 cut(s) 388
Aor51HI AGCGCT 1 cut(s) 830
AoxI GGCC 5 cut(s) 717, 761, 802, 1015, 1620
ApeKI GCWGC 4 cut(s) 96, 784, 826, 1280
ApoI RAATTY 2 cut(s) 37, 1368
AspA2I CCTAGG 1 cut(s) 91
AspLEI GCGC 4 cut(s) 831, 1389, 1391, 1497
AspS9I GGNCC 1 cut(s) 176
AsuHPI GGTGA 7 cut(s) 209, 262, 287, 358, 512, 1219, 1492
AvaII GGWCC 1 cut(s) 176
AvrII CCTAGG 1 cut(s) 91
AxyI CCTNAGG 1 cut(s) 111
BaeGI GKGCMC 1 cut(s) 432
BalI TGGCCA 1 cut(s) 763
BanI GGYRCC 1 cut(s) 102
BanII GRGCYC 2 cut(s) 214, 447
BauI CACGAG 1 cut(s) 1538
BbsI GAAGAC 1 cut(s) 1430
Bbv12I GWGCWC 3 cut(s) 214, 447, 1539
BbvCI CCTCAGC 1 cut(s) 945
BbvI GCAGC 4 cut(s) 108, 771, 838, 1267
BccI CCATC 5 cut(s) 137, 569, 672, 1055, 1298
BceAI ACGGC 4 cut(s) 595, 817, 931, 1635
BcgI CGANNNNNNTGC 2 cut(s) 1366, 1400
BciT130I CCWGG 1 cut(s) 1190
BcoDI GTCTC 1 cut(s) 983
BfaI CTAG 1 cut(s) 92
BfmI CTRYAG 1 cut(s) 699
BfoI RGCGCY 1 cut(s) 832
BfrI CTTAAG 1 cut(s) 482
BfuAI ACCTGC 1 cut(s) 114
BglII AGATCT 1 cut(s) 1287
BisI GCNGC 5 cut(s) 97, 785, 827, 1281, 1503
BlnI CCTAGG 1 cut(s) 91
BlpI GCTNAGC 1 cut(s) 1072
BlsI GCNGC 5 cut(s) 98, 786, 828, 1282, 1504
BmcAI AGTACT 1 cut(s) 884
Bme1390I CCNGG 1 cut(s) 1190
Bme18I GGWCC 1 cut(s) 176
BmgT120I GGNCC 1 cut(s) 176
BmiI GGNNCC 1 cut(s) 104
BmrFI CCNGG 1 cut(s) 1190
BmsI GCATC 1 cut(s) 664
BpiI GAAGAC 1 cut(s) 1430
BplI GAGNNNNNCTC 2 cut(s) 1122, 1154
BpmI CTGGAG 1 cut(s) 1398
Bpu10I CCTNAGC 1 cut(s) 945
Bpu1102I GCTNAGC 1 cut(s) 1072
BpuEI CTTGAG 1 cut(s) 1460
BsaI GGTCTC 1 cut(s) 983
BsaJI CCNNGG 4 cut(s) 91, 714, 1518, 1617
BsaWI WCCGGW 1 cut(s) 178
BsaXI ACNNNNNCTCC 2 cut(s) 245, 275
Bsc4I CCNNNNNNNGG 3 cut(s) 112, 304, 1144
Bse118I RCCGGY 1 cut(s) 173
Bse1I ACTGG 5 cut(s) 203, 461, 764, 1207, 1469
Bse21I CCTNAGG 1 cut(s) 111
Bse3DI GCAATG 1 cut(s) 1497
BseBI CCWGG 1 cut(s) 1190
BseDI CCNNGG 4 cut(s) 91, 714, 1518, 1617
BseGI GGATG 4 cut(s) 61, 324, 1066, 1086
BseLI CCNNNNNNNGG 3 cut(s) 112, 304, 1144
BseMI GCAATG 1 cut(s) 1497
BseMII CTCAG 5 cut(s) 102, 936, 1239, 1301, 1643
BseNI ACTGG 5 cut(s) 203, 461, 764, 1207, 1469
BsePI GCGCGC 1 cut(s) 1387
BseRI GAGGAG 3 cut(s) 468, 647, 1010
BseSI GKGCMC 1 cut(s) 432
BseX3I CGGCCG 1 cut(s) 802
BseXI GCAGC 4 cut(s) 108, 771, 838, 1267
BsgI GTGCAG 1 cut(s) 1393
Bsh1236I CGCG 1 cut(s) 1389
Bsh1285I CGRYCG 1 cut(s) 805
BshFI GGCC 5 cut(s) 719, 763, 804, 1017, 1622
BshNI GGYRCC 1 cut(s) 102
BsiEI CGRYCG 1 cut(s) 805
BsiHKAI GWGCWC 3 cut(s) 214, 447, 1539
BsiSI CCGG 2 cut(s) 174, 179
BslFI GGGAC 2 cut(s) 379, 1123
BslI CCNNNNNNNGG 3 cut(s) 112, 304, 1144
BsmAI GTCTC 1 cut(s) 983
BsmFI GGGAC 2 cut(s) 379, 1123
BsmI GAATGC 2 cut(s) 1098, 1336
BsnI GGCC 5 cut(s) 719, 763, 804, 1017, 1622
Bso31I GGTCTC 1 cut(s) 983
Bsp1286I GDGCHC 4 cut(s) 214, 432, 447, 1539
Bsp1407I TGTACA 1 cut(s) 495
Bsp143I GATC 2 cut(s) 380, 1287
Bsp1720I GCTNAGC 1 cut(s) 1072
BspACI CCGC 4 cut(s) 305, 356, 1503, 1545
BspANI GGCC 5 cut(s) 719, 763, 804, 1017, 1622
BspCNI CTCAG 5 cut(s) 103, 937, 1240, 1302, 1642
BspFNI CGCG 1 cut(s) 1389
BspLI GGNNCC 1 cut(s) 104
BspMI ACCTGC 1 cut(s) 114
BspPI GGATC 1 cut(s) 388
BspQI GCTCTTC 1 cut(s) 219
BspT107I GGYRCC 1 cut(s) 102
BspTI CTTAAG 1 cut(s) 482
BspTNI GGTCTC 1 cut(s) 983
BsrDI GCAATG 1 cut(s) 1497
BsrFI RCCGGY 1 cut(s) 173
BsrGI TGTACA 1 cut(s) 495
BsrI ACTGG 5 cut(s) 203, 461, 764, 1207, 1469
BssAI RCCGGY 1 cut(s) 173
BssECI CCNNGG 4 cut(s) 91, 714, 1518, 1617
BssHII GCGCGC 1 cut(s) 1387
BssMI GATC 2 cut(s) 380, 1287
BssSI CACGAG 1 cut(s) 1538
BssT1I CCWWGG 3 cut(s) 91, 714, 1518
Bst2BI CACGAG 1 cut(s) 1538
Bst2UI CCWGG 1 cut(s) 1190
Bst4CI ACNGT 4 cut(s) 774, 875, 1013, 1326
Bst6I CTCTTC 5 cut(s) 219, 335, 522, 557, 1593
BstAFI CTTAAG 1 cut(s) 482
BstAUI TGTACA 1 cut(s) 495
BstC8I GCNNGC 4 cut(s) 101, 1389, 1515, 1581
BstDEI CTNAG 9 cut(s) 111, 723, 945, 1072, 1127, 1143, 1248, 1310, 1629
BstDSI CCRYGG 1 cut(s) 1617
BstEII GGTNACC 1 cut(s) 1467
BstENI CCTNNNNNAGG 2 cut(s) 110, 1142
BstF5I GGATG 4 cut(s) 61, 324, 1066, 1086
BstFNI CGCG 1 cut(s) 1389
BstH2I RGCGCY 1 cut(s) 832
BstHHI GCGC 4 cut(s) 831, 1389, 1391, 1497
BstKTI GATC 2 cut(s) 383, 1290
BstMAI GTCTC 1 cut(s) 983
BstMBI GATC 2 cut(s) 380, 1287
BstMCI CGRYCG 1 cut(s) 805
BstMWI GCNNNNNNNGC 2 cut(s) 716, 1395
BstNI CCWGG 1 cut(s) 1190
BstNSI RCATGY 1 cut(s) 1517
BstPI GGTNACC 1 cut(s) 1467
BstSCI CCNGG 1 cut(s) 1188
BstSFI CTRYAG 1 cut(s) 699
BstSLI GKGCMC 1 cut(s) 432
BstUI CGCG 1 cut(s) 1389
BstV1I GCAGC 4 cut(s) 108, 771, 838, 1267
BstV2I GAAGAC 1 cut(s) 1430
BstX2I RGATCY 1 cut(s) 1287
BstYI RGATCY 1 cut(s) 1287
BstZI CGGCCG 1 cut(s) 802
Bsu36I CCTNAGG 1 cut(s) 111
BsuRI GGCC 5 cut(s) 719, 763, 804, 1017, 1622
BtgI CCRYGG 1 cut(s) 1617
BtsCI GGATG 4 cut(s) 61, 324, 1066, 1086
BtsI GCAGTG 2 cut(s) 430, 1405
BtsIMutI CAGTG 3 cut(s) 430, 770, 1405
BveI ACCTGC 1 cut(s) 114
Cac8I GCNNGC 4 cut(s) 101, 1389, 1515, 1581
CfoI GCGC 4 cut(s) 831, 1389, 1391, 1497
Cfr10I RCCGGY 1 cut(s) 173
Cfr13I GGNCC 1 cut(s) 176
CpoI CGGWCCG 1 cut(s) 176
Csp6I GTAC 4 cut(s) 487, 496, 745, 883
CspI CGGWCCG 1 cut(s) 176
CviAII CATG 8 cut(s) 170, 424, 493, 556, 1420, 1514, 1555, 1595
CviQI GTAC 4 cut(s) 487, 496, 745, 883
DdeI CTNAG 9 cut(s) 111, 723, 945, 1072, 1127, 1143, 1248, 1310, 1629
DpnI GATC 2 cut(s) 382, 1289
DpnII GATC 2 cut(s) 380, 1287
DraI TTTAAA 1 cut(s) 36
DraIII CACNNNGTG 1 cut(s) 774
DrdI GACNNNNNNGTC 1 cut(s) 1432
DseDI GACNNNNNNGTC 1 cut(s) 1432
EaeI YGGCCR 3 cut(s) 761, 802, 1620
EagI CGGCCG 1 cut(s) 802
Eam1104I CTCTTC 5 cut(s) 219, 335, 522, 557, 1593
EarI CTCTTC 5 cut(s) 219, 335, 522, 557, 1593
Ecl136II GAGCTC 2 cut(s) 212, 445
EclXI CGGCCG 1 cut(s) 802
Eco130I CCWWGG 3 cut(s) 91, 714, 1518
Eco24I GRGCYC 2 cut(s) 214, 447
Eco31I GGTCTC 1 cut(s) 983
Eco47I GGWCC 1 cut(s) 176
Eco47III AGCGCT 1 cut(s) 830
Eco52I CGGCCG 1 cut(s) 802
Eco53kI GAGCTC 2 cut(s) 212, 445
Eco81I CCTNAGG 1 cut(s) 111
Eco91I GGTNACC 1 cut(s) 1467
EcoICRI GAGCTC 2 cut(s) 212, 445
EcoNI CCTNNNNNAGG 2 cut(s) 110, 1142
EcoO65I GGTNACC 1 cut(s) 1467
EcoRII CCWGG 1 cut(s) 1188
EcoT14I CCWWGG 3 cut(s) 91, 714, 1518
EcoT38I GRGCYC 2 cut(s) 214, 447
ErhI CCWWGG 3 cut(s) 91, 714, 1518
FaeI CATG 8 cut(s) 173, 427, 496, 559, 1423, 1517, 1558, 1598
FalI AAGNNNNNCTT 6 cut(s) 921, 953, 1110, 1142, 1572, 1604
FaqI GGGAC 2 cut(s) 379, 1123
FatI CATG 8 cut(s) 169, 423, 492, 555, 1419, 1513, 1554, 1594
FblI GTMKAC 1 cut(s) 596
Fnu4HI GCNGC 5 cut(s) 97, 785, 827, 1281, 1503
FokI GGATG 4 cut(s) 68, 311, 1073, 1073
FriOI GRGCYC 2 cut(s) 214, 447
Fsp4HI GCNGC 5 cut(s) 97, 785, 827, 1281, 1503
FspBI CTAG 1 cut(s) 92
GlaI GCGC 4 cut(s) 830, 1388, 1390, 1496
GluI GCNGC 5 cut(s) 97, 785, 827, 1281, 1503
GsuI CTGGAG 1 cut(s) 1398
HaeII RGCGCY 1 cut(s) 832
HaeIII GGCC 5 cut(s) 719, 763, 804, 1017, 1622
HapII CCGG 2 cut(s) 174, 179
HhaI GCGC 4 cut(s) 831, 1389, 1391, 1497
Hin1II CATG 8 cut(s) 173, 427, 496, 559, 1423, 1517, 1558, 1598
Hin6I GCGC 4 cut(s) 829, 1387, 1389, 1495
HinP1I GCGC 4 cut(s) 829, 1387, 1389, 1495
HpaII CCGG 2 cut(s) 174, 179
HphI GGTGA 7 cut(s) 209, 262, 287, 358, 512, 1219, 1492
Hpy166II GTNNAC 3 cut(s) 498, 597, 1027
Hpy188I TCNGA 9 cut(s) 165, 380, 536, 990, 1104, 1213, 1561, 1611, 1632
Hpy188III TCNNGA 1 cut(s) 982
Hpy8I GTNNAC 3 cut(s) 498, 597, 1027
HpyAV CCTTC 3 cut(s) 1369, 1470, 1517
HpyCH4III ACNGT 4 cut(s) 774, 875, 1013, 1326
HpyCH4IV ACGT 3 cut(s) 158, 740, 1433
HpyF10VI GCNNNNNNNGC 2 cut(s) 716, 1395
HpyF3I CTNAG 9 cut(s) 111, 723, 945, 1072, 1127, 1143, 1248, 1310, 1629
HpySE526I ACGT 3 cut(s) 158, 740, 1433
Hsp92II CATG 8 cut(s) 173, 427, 496, 559, 1423, 1517, 1558, 1598
HspAI GCGC 4 cut(s) 829, 1387, 1389, 1495
Kzo9I GATC 2 cut(s) 380, 1287
LguI GCTCTTC 1 cut(s) 219
LmnI GCTCC 1 cut(s) 997
Lsp1109I GCAGC 4 cut(s) 108, 771, 838, 1267
LweI GCATC 1 cut(s) 664
MaeI CTAG 1 cut(s) 92
MaeII ACGT 3 cut(s) 158, 740, 1433
MaeIII GTNAC 7 cut(s) 268, 346, 358, 766, 1434, 1467, 1547
MalI GATC 2 cut(s) 382, 1289
MboI GATC 2 cut(s) 380, 1287
MboII GAAGA 9 cut(s) 206, 322, 509, 544, 609, 1115, 1331, 1435, 1580
MflI RGATCY 1 cut(s) 1287
MhlI GDGCHC 4 cut(s) 214, 432, 447, 1539
MlsI TGGCCA 1 cut(s) 763
MluCI AATT 7 cut(s) 37, 436, 530, 541, 845, 1368, 1382
MluNI TGGCCA 1 cut(s) 763
MlyI GAGTC 1 cut(s) 1420
MmeI TCCRAC 3 cut(s) 358, 1508, 1627
Mox20I TGGCCA 1 cut(s) 763
MscI TGGCCA 1 cut(s) 763
MseI TTAA 8 cut(s) 15, 35, 413, 483, 843, 968, 1566, 1640
Msp20I TGGCCA 1 cut(s) 763
MspA1I CMGCKG 1 cut(s) 1042
MspCI CTTAAG 1 cut(s) 482
MspI CCGG 2 cut(s) 174, 179
MspR9I CCNGG 1 cut(s) 1190
Mva1269I GAATGC 2 cut(s) 1098, 1336
MvaI CCWGG 1 cut(s) 1190
MvnI CGCG 1 cut(s) 1389
MwoI GCNNNNNNNGC 2 cut(s) 716, 1395
NdeII GATC 2 cut(s) 380, 1287
NlaIII CATG 8 cut(s) 173, 427, 496, 559, 1423, 1517, 1558, 1598
NlaIV GGNNCC 1 cut(s) 104
NmuCI GTSAC 4 cut(s) 268, 346, 766, 1434
NspI RCATGY 1 cut(s) 1517
PaeI GCATGC 1 cut(s) 1517
PaqCI CACCTGC 1 cut(s) 114
PauI GCGCGC 1 cut(s) 1387
PciSI GCTCTTC 1 cut(s) 219
PctI GAATGC 2 cut(s) 1098, 1336
PkrI GCNGC 5 cut(s) 98, 786, 828, 1282, 1504
PleI GAGTC 1 cut(s) 1420
PpsI GAGTC 1 cut(s) 1420
Psp124BI GAGCTC 2 cut(s) 214, 447
Psp6I CCWGG 1 cut(s) 1188
PspEI GGTNACC 1 cut(s) 1467
PspGI CCWGG 1 cut(s) 1188
PspN4I GGNNCC 1 cut(s) 104
PspPI GGNCC 1 cut(s) 176
PsuI RGATCY 1 cut(s) 1287
PteI GCGCGC 1 cut(s) 1387
PvuII CAGCTG 1 cut(s) 1042
RsaI GTAC 4 cut(s) 488, 497, 746, 884
RsaNI GTAC 4 cut(s) 487, 496, 745, 883
Rsr2I CGGWCCG 1 cut(s) 176
RsrII CGGWCCG 1 cut(s) 176
SacI GAGCTC 2 cut(s) 214, 447
SapI GCTCTTC 1 cut(s) 219
SaqAI TTAA 8 cut(s) 15, 35, 413, 483, 843, 968, 1566, 1640
SatI GCNGC 5 cut(s) 97, 785, 827, 1281, 1503
Sau3AI GATC 2 cut(s) 380, 1287
Sau96I GGNCC 1 cut(s) 176
ScaI AGTACT 1 cut(s) 884
SchI GAGTC 1 cut(s) 1420
ScrFI CCNGG 1 cut(s) 1190
SduI GDGCHC 4 cut(s) 214, 432, 447, 1539
SfaNI GCATC 1 cut(s) 664
SfcI CTRYAG 1 cut(s) 699
SinI GGWCC 1 cut(s) 176
SmlI CTYRAG 2 cut(s) 482, 1439
SmoI CTYRAG 2 cut(s) 482, 1439
SphI GCATGC 1 cut(s) 1517
Sse9I AATT 7 cut(s) 37, 436, 530, 541, 845, 1368, 1382
SsiI CCGC 4 cut(s) 305, 356, 1503, 1545
SspI AATATT 2 cut(s) 69, 81
SspMI CTAG 1 cut(s) 92
SstI GAGCTC 2 cut(s) 214, 447
StyD4I CCNGG 1 cut(s) 1188
StyI CCWWGG 3 cut(s) 91, 714, 1518
TaaI ACNGT 4 cut(s) 774, 875, 1013, 1326
TaiI ACGT 3 cut(s) 161, 743, 1436
TaqI TCGA 2 cut(s) 441, 1591
TasI AATT 7 cut(s) 37, 436, 530, 541, 845, 1368, 1382
TatI WGTACW 2 cut(s) 495, 882
TauI GCSGC 1 cut(s) 1505
Tru1I TTAA 8 cut(s) 15, 35, 413, 483, 843, 968, 1566, 1640
Tru9I TTAA 8 cut(s) 15, 35, 413, 483, 843, 968, 1566, 1640
TscAI CASTG 3 cut(s) 437, 777, 1412
TseFI GTSAC 4 cut(s) 268, 346, 766, 1434
TseI GCWGC 4 cut(s) 96, 784, 826, 1280
Tsp45I GTSAC 4 cut(s) 268, 346, 766, 1434
TspDTI ATGAA 6 cut(s) 158, 313, 431, 544, 627, 1436
TspGWI ACGGA 1 cut(s) 90
TspRI CASTG 3 cut(s) 437, 777, 1412
Vha464I CTTAAG 1 cut(s) 482
VpaK11BI GGWCC 1 cut(s) 176
XagI CCTNNNNNAGG 2 cut(s) 110, 1142
XapI RAATTY 2 cut(s) 37, 1368
XceI RCATGY 1 cut(s) 1517
XcmI CCANNNNNNNNNTGG 1 cut(s) 771
XmaJI CCTAGG 1 cut(s) 91
XmiI GTMKAC 1 cut(s) 596
XspI CTAG 1 cut(s) 92
ZrmI AGTACT 1 cut(s) 884
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.