Rw1G015290

Belongs to the sterol desaturase family

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
Physical Location & Seq
Reverse (-)
34061922 .. 34065780
3859 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G015290.1

Sequence Viewer

Length: 1854 bp
ATGGCTTCCACACCTGGAATGCCATGGACACCTCTTGGGAGCTTTAAGTACGTGGTGTTAGCTCCTTGGGTGATTCACAGCACATACTCATATATGTTTGGAGAAGAAGGCACAGATCTATTTTACATCCTCGTATTTCCATTTCTGTTGTGGAGGATGCTCCACAACCAGATATGGATCTCACTTTCTCGCTATCAAACTGCCAAAGGCAAAGGAACAATCGTGGACAAGGGCCTCGAATTTGAACAAGTCGACAGAGAAAGAGATTGGGATGATCAAATCATATTCAATGGAATCCTATTTTACATAGTCAGGTGCGTCCTGCCTATGGCTCAAACTGACCTACCAATTTGGAGGGGAAATGGGTTGGTCATGACGATGCTGCTTCATGCTGGTCCGGTAGAGTACCTCTACTACTGGTTACACAGAGCACTTCACCACCATTTCCTCTACTCTCGCTACCATTCTCATCACCATTCCTCTATTGTCACTGAGCCAATTACTTCTGTCATTCACCCATTTGCGGAGCACATAACATATTTCATGCTCTTCGCAATACCAATGGTGGCAACTCTGTTGATCGGAACAGCATCCATCTCATCCTATTTTGTTTATATTACTTATATCGACTTCATGAACAACTTGGGGCACTGCAATTTCGAGTTCATTCCGAACTGGATCTTCTCTCTTTTTCCTCCTATTAAGTATCTAATATATACTCCCTCGTACCACTCCTTGCATCACACACAATTTCGAACCAATTACTCCCTCTTCATGCCAATCTATGACTATATATATGGTACCATGGACAAGTCTAGTGATACTCTACACGAATCTTCACTCAGGAAAGAGGAATCACCTGATGTGGTTCATCTAACCCATTTAACAACAACTGAATCCATCTACCGACTCCCACTGGCATTTGCTTCCTTGGCCTCTAATCCACACACTTCAACATGGTACTTATGGCTGTTGTGGCCTGTGACGTTATGGTCCTTGATGCTAACTTGGATATTTGGCCGTTCATTTGTTATTGAGAGGCAGCGTTTTGATAAACACAGACTACAAACTTGGGTTATTCCAAAATACAGTCTGCAGTACTTGCTCTCATGGCAAAATGAAGCTATAAACAGAGCGATTGAGGATGCCATACTTGAAGCTGAGCAAATGGGTGTCAAAGTTATAAGTTTAGGTCTCTTTAATCAGGGTGAGAGGCTCAATAATAATGGTGGTATATATGTCCAGAGGAATCCACGGCTGAAAATCAAGGTCGTGGATGGGAGTAGCTTAGCTGTGGCTGTCATCCTTAACAGCATTCCGAAAGGAACAACCCAGGTTCTCCTTGCAGGCAACCTCACAAAGGTAGCTTATGCCCTTGCCTTTTCTTTGTGCCGGAGAGATATCCAGGTAGTTACATTACAGCAGGCTGAGTATTTGAAGCTCACCAAATCATTAAATGCTACAGAGGGTAAGGTGGTTCATGACAGAAGCTATGCTCAAAAGATTTGGTTGGTGGGAGATGGGTTGAGTAAAAAAGAACAGTTGAGTGCACCAAAAGGAACAATTTTTGTTCCCTTCTCTCAATTTCCACCAAAACAGTTGCGCAGAGACTGCTTCTACCACTACACACCAGCAATGAAGATCCCCAAGTCTCTTGAGAATGTTTACTCTTGTGAGAACTGGTTGCCAAGGAGGGTGATGAGTGCGTGGCGTATAGCAGGAATAGTGCATGCATTGGAAGGTTGGAATGAGCACGAGTGTGGTCACACCATGTCCAGCATTGACAAAGTTTGGCAAGCAACTCTTCGACGTGGCTTTCAGCCTCTTATCTCCAAAGAGGCAAAGATTGATTAG

Protein Analysis

617

Amino Acids

71.56

Weight (kDa)

8.81

Isoelectric Point (pI)

34.26

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FA_hydroxylase PF04116 132 - 268 8e-22 Fatty acid hydroxylase
CER1-like_C PF12076 446 - 608 2.2e-73 CER1-like, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000300)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G02190 AT1G02190 AT1G02205 AT1G02205 AT1G02205 AT1G02205 AT1G02205 AT2G37700 AT2G37700 AT2G37700 AT2G37700
fragaria_vesca FvH4_1g22160 FvH4_7g08560 FvH4_7g08560 FvH4_7g08560 FvH4_7g08570 FvH4_7g08570 FvH4_7g08590 FvH4_7g08590
malus_domestica MD02G1226900.v1.1 MD07G1083700.v1.1 MD07G1083800.v1.1 MD07G1086200.v1.1 MD07G1086300.v1.1 MD07G1086700.v1.1 MD13G1075600.v1.1
prunus_persica Prupe.2G112600_v2.0.a1 Prupe.2G112800_v2.0.a1 Prupe.2G113000_v2.0.a1 Prupe.2G113500_v2.0.a1 Prupe.2G113600_v2.0.a1
pyrus_communis pycom02g19600 pycom02g19610 pycom07g06920 pycom07g06930
rosa_chinensis RchiOBHm_Chr1g0343261 RchiOBHm_Chr1g0343301 RchiOBHm_Chr1g0343371 RchiOBHm_Chr1g0343431 RchiOBHm_Chr1g0343441 RchiOBHm_Chr1g0343521 RchiOBHm_Chr1g0343691 RchiOBHm_Chr1g0343791
rosa_laevigata RLG00000028951 RLG00000028953 RLG00000028965 RLG00000028968 RLG00000028969 RLG00000028971 RLG00000028972 RLG00000028974 RLG00000029891
rosa_multiflora Rmu_sc0000021.1_g000002 Rmu_sc0000335.1_g000046 Rmu_sc0000335.1_g000047 Rmu_sc0000335.1_g000058 Rmu_sc0000335.1_g000061 Rmu_sc0000335.1_g000106 Rmu_sc0000335.1_g000125 Rmu_sc0000544.1_g000010 Rmu_sc0003430.1_g000012 Rmu_sc0005796.1_g000004 Rmu_sc0028268.1_g000001 Rmu_ssc0000259.1_g000038
rosa_roxburghii Rroxscaffold_2G00110090 Rroxscaffold_4G00310350 Rroxscaffold_4G00310610 Rroxscaffold_4G00310710 Rroxscaffold_4G00310740 Rroxscaffold_4G00310760 Rroxscaffold_4G00321110
rosa_rugosa Rorug01G0080100 Rorug01G0080200 Rorug01G0166400 Rorug01G0166500 Rorug01G0166500 Rorug01G0166600 Rorug01G0166700 Rorug01G0166800 Rorug01G0168400 Rorug01G0168500 Rorug01G0168800 Rorug03G0241300 Rorug03G0241400 Rorug04G0001200 Rorug06G0031500 Rorug06G0073200 Rorug06G0264000
rosa_samantha Rh1AG098100 Rh1AG181800 Rh1AG182100 Rh1AG182400 Rh1AG183000 Rh1AG183600 Rh1AG184300 Rh1AG185400 Rh1BG104000 Rh1BG150000 Rh1BG150400 Rh1BG152100 Rh1BG152300 Rh1CG168600 Rh1CG168900 Rh1CG169000 Rh1CG169700 Rh1CG170500 Rh1CG171200 Rh1DG182000 Rh1DG182300 Rh1DG184000 Rh1DG184200
rosa_wichuraiana Rw0G012940 Rw1G007640 Rw1G007670 Rw1G011320 Rw1G015090 Rw1G015110 Rw1G015130 Rw1G015150 Rw1G015290

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1184
AasI GACNNNNNNGTC 1 cut(s) 991
Acc16I TGCGCA 1 cut(s) 1604
Acc65I GGTACC 1 cut(s) 800
AccB1I GGYRCC 1 cut(s) 800
AccI GTMKAC 1 cut(s) 252
AciI CCGC 1 cut(s) 524
AclWI GGATC 3 cut(s) 185, 686, 1636
AcoI YGGCCR 1 cut(s) 1018
AcsI RAATTY 1 cut(s) 239
AfaI GTAC 6 cut(s) 50, 407, 728, 802, 962, 1100
AfiI CCNNNNNNNGG 3 cut(s) 328, 523, 1360
AgsI TTSAA 5 cut(s) 245, 289, 954, 1157, 1438
AjiI CACGTC 1 cut(s) 1811
AjnI CCWGG 3 cut(s) 13, 1332, 1404
AleI CACNNNNGTG 1 cut(s) 1758
AluBI AGCT 9 cut(s) 42, 62, 1124, 1160, 1287, 1292, 1367, 1441, 1491
AluI AGCT 9 cut(s) 42, 62, 1124, 1160, 1287, 1292, 1367, 1441, 1491
Alw21I GWGCWC 4 cut(s) 433, 531, 1552, 1755
Alw26I GTCTC 3 cut(s) 1199, 1602, 1656
Alw44I GTGCAC 1 cut(s) 1548
AlwI GGATC 3 cut(s) 185, 686, 1636
AlwNI CAGNNNCTG 1 cut(s) 1611
AoxI GGCC 4 cut(s) 232, 933, 977, 1018
ApaLI GTGCAC 1 cut(s) 1548
ApeKI GCWGC 2 cut(s) 382, 1042
ApoI RAATTY 1 cut(s) 239
Asp718I GGTACC 1 cut(s) 800
AspLEI GCGC 1 cut(s) 1605
AspS9I GGNCC 3 cut(s) 232, 395, 993
AsuHPI GGTGA 8 cut(s) 82, 428, 464, 506, 849, 1220, 1435, 1708
AsuII TTCGAA 1 cut(s) 754
AvaII GGWCC 2 cut(s) 395, 993
BaeGI GKGCMC 2 cut(s) 651, 1552
BanI GGYRCC 1 cut(s) 800
BauI CACGAG 1 cut(s) 1754
Bbv12I GWGCWC 4 cut(s) 433, 531, 1552, 1755
BbvI GCAGC 2 cut(s) 369, 1054
BccI CCATC 4 cut(s) 602, 908, 1271, 1514
BceAI ACGGC 2 cut(s) 1005, 1271
BciT130I CCWGG 3 cut(s) 15, 1334, 1406
BclI TGATCA 1 cut(s) 274
BcoDI GTCTC 3 cut(s) 1199, 1602, 1656
BfaI CTAG 1 cut(s) 816
BfmI CTRYAG 2 cut(s) 1094, 1461
BglII AGATCT 1 cut(s) 115
BisI GCNGC 2 cut(s) 383, 1043
BlpI GCTNAGC 2 cut(s) 1161, 1288
BlsI GCNGC 2 cut(s) 384, 1044
BmcAI AGTACT 1 cut(s) 1100
Bme1390I CCNGG 3 cut(s) 15, 1334, 1406
Bme18I GGWCC 2 cut(s) 395, 993
BmgBI CACGTC 1 cut(s) 1811
BmgT120I GGNCC 3 cut(s) 232, 395, 993
BmiI GGNNCC 1 cut(s) 802
BmrFI CCNGG 3 cut(s) 15, 1334, 1406
BmsI GCATC 6 cut(s) 147, 369, 599, 748, 990, 1135
Bpu1102I GCTNAGC 2 cut(s) 1161, 1288
Bpu14I TTCGAA 1 cut(s) 754
BpuEI CTTGAG 1 cut(s) 1676
BsaAI YACGTR 1 cut(s) 52
BsaBI GATNNNNATC 1 cut(s) 176
BsaI GGTCTC 1 cut(s) 1199
BsaJI CCNNGG 7 cut(s) 23, 65, 804, 930, 1253, 1332, 1688
BsaWI WCCGGW 1 cut(s) 397
Bsc4I CCNNNNNNNGG 3 cut(s) 328, 523, 1360
Bse1I ACTGG 4 cut(s) 422, 680, 921, 1685
Bse3DI GCAATG 1 cut(s) 1641
Bse8I GATNNNNATC 1 cut(s) 176
BseBI CCWGG 3 cut(s) 15, 1334, 1406
BseDI CCNNGG 7 cut(s) 23, 65, 804, 930, 1253, 1332, 1688
BseGI GGATG 8 cut(s) 126, 162, 277, 590, 599, 1150, 1282, 1302
BseJI GATNNNNATC 1 cut(s) 176
BseLI CCNNNNNNNGG 3 cut(s) 328, 523, 1360
BseMI GCAATG 1 cut(s) 1641
BseMII CTCAG 4 cut(s) 483, 856, 1152, 1419
BseNI ACTGG 4 cut(s) 422, 680, 921, 1685
BseSI GKGCMC 2 cut(s) 651, 1552
BseXI GCAGC 2 cut(s) 369, 1054
BshFI GGCC 4 cut(s) 234, 935, 979, 1020
BshNI GGYRCC 1 cut(s) 800
BsiHKAI GWGCWC 4 cut(s) 433, 531, 1552, 1755
BsiSI CCGG 2 cut(s) 398, 1393
BslI CCNNNNNNNGG 3 cut(s) 328, 523, 1360
BsmAI GTCTC 3 cut(s) 1199, 1602, 1656
BsmI GAATGC 2 cut(s) 24, 1314
BsnI GGCC 4 cut(s) 234, 935, 979, 1020
Bso31I GGTCTC 1 cut(s) 1199
Bsp119I TTCGAA 1 cut(s) 754
Bsp1286I GDGCHC 5 cut(s) 433, 531, 651, 1552, 1755
Bsp143I GATC 6 cut(s) 115, 177, 274, 579, 678, 1641
Bsp1720I GCTNAGC 2 cut(s) 1161, 1288
Bsp19I CCATGG 2 cut(s) 23, 804
BspACI CCGC 1 cut(s) 524
BspANI GGCC 4 cut(s) 234, 935, 979, 1020
BspCNI CTCAG 4 cut(s) 484, 855, 1153, 1420
BspHI TCATGA 3 cut(s) 372, 633, 1480
BspLI GGNNCC 1 cut(s) 802
BspMAI CTGCAG 1 cut(s) 1098
BspPI GGATC 3 cut(s) 185, 686, 1636
BspQI GCTCTTC 1 cut(s) 554
BspT104I TTCGAA 1 cut(s) 754
BspT107I GGYRCC 1 cut(s) 800
BspTNI GGTCTC 1 cut(s) 1199
BsrDI GCAATG 1 cut(s) 1641
BsrI ACTGG 4 cut(s) 422, 680, 921, 1685
BssECI CCNNGG 7 cut(s) 23, 65, 804, 930, 1253, 1332, 1688
BssMI GATC 6 cut(s) 115, 177, 274, 579, 678, 1641
BssSI CACGAG 1 cut(s) 1754
BssT1I CCWWGG 5 cut(s) 23, 65, 804, 930, 1688
Bst2BI CACGAG 1 cut(s) 1754
Bst2UI CCWGG 3 cut(s) 15, 1334, 1406
Bst4CI ACNGT 3 cut(s) 1091, 1542, 1599
Bst6I CTCTTC 3 cut(s) 554, 776, 1809
BstAPI GCANNNNNTGC 2 cut(s) 1102, 1611
BstBAI YACGTR 1 cut(s) 52
BstBI TTCGAA 1 cut(s) 754
BstC8I GCNNGC 4 cut(s) 1348, 1425, 1731, 1797
BstDEI CTNAG 5 cut(s) 492, 842, 1161, 1288, 1428
BstDSI CCRYGG 3 cut(s) 23, 804, 1253
BstENI CCTNNNNNAGG 1 cut(s) 1358
BstF5I GGATG 8 cut(s) 126, 162, 277, 590, 599, 1150, 1282, 1302
BstHHI GCGC 1 cut(s) 1605
BstKTI GATC 6 cut(s) 118, 180, 277, 582, 681, 1644
BstMAI GTCTC 3 cut(s) 1199, 1602, 1656
BstMBI GATC 6 cut(s) 115, 177, 274, 579, 678, 1641
BstMWI GCNNNNNNNGC 5 cut(s) 932, 976, 1102, 1111, 1611
BstNI CCWGG 3 cut(s) 15, 1334, 1406
BstNSI RCATGY 1 cut(s) 1733
BstSCI CCNGG 3 cut(s) 13, 1332, 1404
BstSFI CTRYAG 2 cut(s) 1094, 1461
BstSLI GKGCMC 2 cut(s) 651, 1552
BstV1I GCAGC 2 cut(s) 369, 1054
BstX2I RGATCY 4 cut(s) 115, 177, 678, 1641
BstYI RGATCY 4 cut(s) 115, 177, 678, 1641
BsuRI GGCC 4 cut(s) 234, 935, 979, 1020
BtgI CCRYGG 3 cut(s) 23, 804, 1253
BtrI CACGTC 1 cut(s) 1811
BtsCI GGATG 8 cut(s) 126, 162, 277, 590, 599, 1150, 1282, 1302
BtsI GCAGTG 1 cut(s) 649
BtsIMutI CAGTG 3 cut(s) 489, 649, 914
Cac8I GCNNGC 4 cut(s) 1348, 1425, 1731, 1797
CaiI CAGNNNCTG 1 cut(s) 1611
CciI TCATGA 3 cut(s) 372, 633, 1480
CfoI GCGC 1 cut(s) 1605
Cfr13I GGNCC 3 cut(s) 232, 395, 993
CseI GACGC 1 cut(s) 307
Csp6I GTAC 6 cut(s) 49, 406, 727, 801, 961, 1099
CviQI GTAC 6 cut(s) 49, 406, 727, 801, 961, 1099
DdeI CTNAG 5 cut(s) 492, 842, 1161, 1288, 1428
DpnI GATC 6 cut(s) 117, 179, 276, 581, 680, 1643
DpnII GATC 6 cut(s) 115, 177, 274, 579, 678, 1641
DrdI GACNNNNNNGTC 1 cut(s) 991
DseDI GACNNNNNNGTC 1 cut(s) 991
EaeI YGGCCR 1 cut(s) 1018
Eam1104I CTCTTC 3 cut(s) 554, 776, 1809
EarI CTCTTC 3 cut(s) 554, 776, 1809
Eco130I CCWWGG 5 cut(s) 23, 65, 804, 930, 1688
Eco31I GGTCTC 1 cut(s) 1199
Eco32I GATATC 1 cut(s) 1402
Eco47I GGWCC 2 cut(s) 395, 993
EcoNI CCTNNNNNAGG 1 cut(s) 1358
EcoO109I RGGNCCY 1 cut(s) 232
EcoRII CCWGG 3 cut(s) 13, 1332, 1404
EcoRV GATATC 1 cut(s) 1402
EcoT14I CCWWGG 5 cut(s) 23, 65, 804, 930, 1688
EcoT22I ATGCAT 1 cut(s) 1735
ErhI CCWWGG 5 cut(s) 23, 65, 804, 930, 1688
FalI AAGNNNNNCTT 2 cut(s) 1788, 1820
FbaI TGATCA 1 cut(s) 274
FblI GTMKAC 1 cut(s) 252
Fnu4HI GCNGC 2 cut(s) 383, 1043
FokI GGATG 8 cut(s) 113, 169, 284, 577, 586, 1157, 1289, 1289
Fsp4HI GCNGC 2 cut(s) 383, 1043
FspBI CTAG 1 cut(s) 816
FspI TGCGCA 1 cut(s) 1604
GlaI GCGC 1 cut(s) 1604
GluI GCNGC 2 cut(s) 383, 1043
HaeIII GGCC 4 cut(s) 234, 935, 979, 1020
HapII CCGG 2 cut(s) 398, 1393
HgaI GACGC 1 cut(s) 307
HhaI GCGC 1 cut(s) 1605
Hin6I GCGC 1 cut(s) 1603
HinP1I GCGC 1 cut(s) 1603
HincII GTYRAC 1 cut(s) 253
HindII GTYRAC 1 cut(s) 253
HinfI GANTC 7 cut(s) 73, 294, 833, 854, 896, 909, 1249
HpaII CCGG 2 cut(s) 398, 1393
HphI GGTGA 8 cut(s) 82, 428, 464, 506, 849, 1220, 1435, 1708
Hpy166II GTNNAC 4 cut(s) 226, 253, 1550, 1666
Hpy188I TCNGA 3 cut(s) 584, 672, 1320
Hpy188III TCNNGA 6 cut(s) 373, 634, 844, 1243, 1481, 1655
Hpy8I GTNNAC 4 cut(s) 226, 253, 1550, 1666
Hpy99I CGWCG 1 cut(s) 1812
HpyAV CCTTC 3 cut(s) 101, 1585, 1733
HpyCH4III ACNGT 3 cut(s) 1091, 1542, 1599
HpyCH4IV ACGT 3 cut(s) 51, 986, 1810
HpyCH4V TGCA 7 cut(s) 654, 739, 1096, 1346, 1550, 1729, 1733
HpyF10VI GCNNNNNNNGC 5 cut(s) 932, 976, 1102, 1111, 1611
HpyF3I CTNAG 5 cut(s) 492, 842, 1161, 1288, 1428
HpySE526I ACGT 3 cut(s) 51, 986, 1810
HspAI GCGC 1 cut(s) 1603
KpnI GGTACC 1 cut(s) 804
Ksp22I TGATCA 1 cut(s) 274
Kzo9I GATC 6 cut(s) 115, 177, 274, 579, 678, 1641
LguI GCTCTTC 1 cut(s) 554
LmnI GCTCC 4 cut(s) 39, 67, 165, 526
Lsp1109I GCAGC 2 cut(s) 369, 1054
LweI GCATC 6 cut(s) 147, 369, 599, 748, 990, 1135
MaeI CTAG 1 cut(s) 816
MaeII ACGT 3 cut(s) 51, 986, 1810
MaeIII GTNAC 5 cut(s) 420, 487, 982, 1411, 1763
MalI GATC 6 cut(s) 117, 179, 276, 581, 680, 1643
MboI GATC 6 cut(s) 115, 177, 274, 579, 678, 1641
MboII GAAGA 7 cut(s) 116, 541, 673, 763, 828, 1651, 1796
MflI RGATCY 4 cut(s) 115, 177, 678, 1641
MhlI GDGCHC 5 cut(s) 433, 531, 651, 1552, 1755
MluCI AATT 8 cut(s) 239, 348, 498, 655, 749, 760, 1563, 1583
MlyI GAGTC 1 cut(s) 903
MmeI TCCRAC 1 cut(s) 1724
Mph1103I ATGCAT 1 cut(s) 1735
MseI TTAA 6 cut(s) 45, 702, 884, 1200, 1308, 1454
MslI CAYNNNNRTG 2 cut(s) 377, 1758
MspI CCGG 2 cut(s) 398, 1393
MspR9I CCNGG 3 cut(s) 15, 1334, 1406
Mva1269I GAATGC 2 cut(s) 24, 1314
MvaI CCWGG 3 cut(s) 15, 1334, 1406
MwoI GCNNNNNNNGC 5 cut(s) 932, 976, 1102, 1111, 1611
NcoI CCATGG 2 cut(s) 23, 804
NdeII GATC 6 cut(s) 115, 177, 274, 579, 678, 1641
NlaIV GGNNCC 1 cut(s) 802
NmuCI GTSAC 3 cut(s) 487, 982, 1763
NsbI TGCGCA 1 cut(s) 1604
NsiI ATGCAT 1 cut(s) 1735
NspI RCATGY 1 cut(s) 1733
NspV TTCGAA 1 cut(s) 754
OliI CACNNNNGTG 1 cut(s) 1758
PaeI GCATGC 1 cut(s) 1733
PagI TCATGA 3 cut(s) 372, 633, 1480
PciSI GCTCTTC 1 cut(s) 554
PctI GAATGC 2 cut(s) 24, 1314
PfeI GAWTC 6 cut(s) 73, 294, 833, 854, 896, 1249
PkrI GCNGC 2 cut(s) 384, 1044
PleI GAGTC 1 cut(s) 903
PpsI GAGTC 1 cut(s) 903
Ppu21I YACGTR 1 cut(s) 52
PsiI TTATAA 1 cut(s) 1184
Psp6I CCWGG 3 cut(s) 13, 1332, 1404
PspGI CCWGG 3 cut(s) 13, 1332, 1404
PspN4I GGNNCC 1 cut(s) 802
PspPI GGNCC 3 cut(s) 232, 395, 993
PstI CTGCAG 1 cut(s) 1098
PstNI CAGNNNCTG 1 cut(s) 1611
PsuI RGATCY 4 cut(s) 115, 177, 678, 1641
RsaI GTAC 6 cut(s) 50, 407, 728, 802, 962, 1100
RsaNI GTAC 6 cut(s) 49, 406, 727, 801, 961, 1099
RseI CAYNNNNRTG 2 cut(s) 377, 1758
SalI GTCGAC 1 cut(s) 251
SapI GCTCTTC 1 cut(s) 554
SaqAI TTAA 6 cut(s) 45, 702, 884, 1200, 1308, 1454
SatI GCNGC 2 cut(s) 383, 1043
Sau3AI GATC 6 cut(s) 115, 177, 274, 579, 678, 1641
Sau96I GGNCC 3 cut(s) 232, 395, 993
ScaI AGTACT 1 cut(s) 1100
SchI GAGTC 1 cut(s) 903
ScrFI CCNGG 3 cut(s) 15, 1334, 1406
SduI GDGCHC 5 cut(s) 433, 531, 651, 1552, 1755
SfaNI GCATC 6 cut(s) 147, 369, 599, 748, 990, 1135
SfcI CTRYAG 2 cut(s) 1094, 1461
SfuI TTCGAA 1 cut(s) 754
SinI GGWCC 2 cut(s) 395, 993
SmiMI CAYNNNNRTG 2 cut(s) 377, 1758
SmlI CTYRAG 1 cut(s) 1655
SmoI CTYRAG 1 cut(s) 1655
SphI GCATGC 1 cut(s) 1733
Sse9I AATT 8 cut(s) 239, 348, 498, 655, 749, 760, 1563, 1583
SsiI CCGC 1 cut(s) 524
SspMI CTAG 1 cut(s) 816
StyD4I CCNGG 3 cut(s) 13, 1332, 1404
StyI CCWWGG 5 cut(s) 23, 65, 804, 930, 1688
TaaI ACNGT 3 cut(s) 1091, 1542, 1599
TaiI ACGT 3 cut(s) 54, 989, 1813
TaqI TCGA 6 cut(s) 237, 252, 627, 660, 754, 1807
TasI AATT 8 cut(s) 239, 348, 498, 655, 749, 760, 1563, 1583
TatI WGTACW 1 cut(s) 1098
TfiI GAWTC 6 cut(s) 73, 294, 833, 854, 896, 1249
Tru1I TTAA 6 cut(s) 45, 702, 884, 1200, 1308, 1454
Tru9I TTAA 6 cut(s) 45, 702, 884, 1200, 1308, 1454
TscAI CASTG 3 cut(s) 496, 656, 921
TseFI GTSAC 3 cut(s) 487, 982, 1763
TseI GCWGC 2 cut(s) 382, 1042
Tsp45I GTSAC 3 cut(s) 487, 982, 1763
TspRI CASTG 3 cut(s) 496, 656, 921
VneI GTGCAC 1 cut(s) 1548
VpaK11BI GGWCC 2 cut(s) 395, 993
XagI CCTNNNNNAGG 1 cut(s) 1358
XapI RAATTY 1 cut(s) 239
XceI RCATGY 1 cut(s) 1733
XcmI CCANNNNNNNNNTGG 1 cut(s) 147
XmiI GTMKAC 1 cut(s) 252
XspI CTAG 1 cut(s) 816
ZrmI AGTACT 1 cut(s) 1100
Zsp2I ATGCAT 1 cut(s) 1735
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.