Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1A

Orthogroup ID

OG0000300

Physical Location & Seq

Genomic Coordinates Reverse (-)

34908897 .. 34919936

Gene Structure 11040 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1AG183600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1836 bp

ATGGCTTCCACACCTGGAATTCTTACTAACTGGCCATGGACACCTCTTGGGAGCTTTAAGTACTTGGTGTTAGCTCCTTGGGTGATTCACAGCACCTACTTGTTTATGTTTGGAGAAGAAGGCACAGATCTATTTTACATCCTCGTATTTCCATTTCTGTTGTGGAGGATGCTCCACAATCAGATATGGATCTCACTTTCTCGCTATCAAACTGCCAAAGGCACAGGAACAATCATTGACAAGGGCCTCGAATTCGAACAAGTTGACAGAGAAAGAGATTGGGATGATCAAATCATATTCAATGGAATGTTGTTTTACATAGGCAGGTTTCTGGCCAGGTGCGTCCTGCCTAGGGCTCAAACTGACCTACCAATTTGGAGGGGAGATGGGTTGGTCATGACGATGCTGCTTCATGCTGGTCCGGTCGAGTACCTCTACTACTGGTTGCACAGAGCACTTCACCACCATTTTCTCTACTCTCGCTACCATTCTCATCACCATTCTTCCATTGTCACTGAGCCAATTACTTTTGTGGCTCACCCATTTGCAGAGCACATAACATATTTCATGCTCTTCGCAATACCAATGGTGGCAACTCTGTTGATCGGAACAGCTTCCATCACATCCTATTTTGTTTATATTACTTATATCGACCTCATGAACAACTTGGGACACTGCAACTTCGAGTTCATTCCGAACTGGATCTTCTGTCTTTTTCCTCCTCTTAAGTATCTCATTTATACTCCCTCGTACCACTCTTTGCATCACACTCAATTTCGTACCAATTACTCCCTCTTCATGCCAATCTATGACTACACATATGGTACCATGGACACGTCTAGTGATACTCTACATGAATCTTCACTCAGGAAAGAGGAATCACCTGATGTGGTTCATCTAACCCATTTAACAACAACTAAGTCCATCTACCGACTCCCACTGGCATTTGCTTCCTCGGCCTCTAATCCACACACTTCAACATGGTACTTATGGTTGTTGTGGCCTGTAACATTAGGGTCTATGATGCTAACTCGGATATTTGACCGTTCGTTTGTTATTGAGAGACAGTGTTTTGATAAACAAAGACTACAAACTTGGGTTATTCCAAAATACAGTTTGCAGTACTTGGTCTCATGGCAAAATGAAGCTATAAACAGAGCGATTGAGGATGCCATACTTGAAGCTGAGAAAAGGGGTGTCAAAGTTATAAGTTTAGGTCTCTTTAATCAGGGTGAGGGGCTCAATAGTTATGGTGGTATATATGTCCAGAGGAATCGGCCACGGCTGAAAATCAAGGTGGTGGATGGGAGTAGCTTAGCTGTGGCTGTCATCCTTAACAGCATTCCAAAAGGCGCTACCCAGGTTCTCCTGACAGGAAACCTCACAAAGGTTGCTTATGCCCTTGCCTTTTCTTTGTGCCAGAGAGATATCCAGGTAGTTACATTACAGCTGGCTGAGTATTTGAAGCTCACCAAATCAGTAAATGCTACAGAGGGTAAGGTGGTTCATGACAGAAGCTATGCTCAAAAGTTGAGTGCACCCAACGGAACAATATTTGTTCCGTTCTCTCAATTCCCGCCAAAAAAGTTGCGAAAAGACTGTTACTATCACTGTACTCCAGCCATGAAGATCCCCAAGTCTCTTGAGAATGTTTACTCTTGTGAGAACTGGTTGCCAAGGAGGGTGATGAGTGCGTGGCGTATAGCTGGGATAGTGCATGCATTGGAAGGTTTGAATGATCATGAGTGTGGTTATACCATGTCCGATATTGACAAAGTTTGGCAAGCTACTCTTCGACATGGCTTTCAGCCTCTCATCCCCACCACTACTACTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0006629 GO:0008150 GO:0008152 GO:0012505 GO:0016020 GO:0016491 GO:0031984 GO:0042175 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044238 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0055114 GO:0071704 GO:0098827

KEGG Pathways

Metabolic & Signaling

ko00073 ko01110 map00073 map01110

Pfam Domains

Protein Families

FA_hydroxylase Wax2_C

Protein Analysis

611

Amino Acids

70.53

Weight (kDa)

8.63

Isoelectric Point (pI)

28.32

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FA_hydroxylase	PF04116	140 - 276	5.1e-20	Fatty acid hydroxylase
CER1-like_C	PF12076	455 - 604	7.6e-58	CER1-like, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000300)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G02190 AT1G02190 AT1G02205 AT1G02205 AT1G02205 AT1G02205 AT1G02205 AT2G37700 AT2G37700 AT2G37700 AT2G37700
fragaria_vesca	FvH4_1g22160 FvH4_7g08560 FvH4_7g08560 FvH4_7g08560 FvH4_7g08570 FvH4_7g08570 FvH4_7g08590 FvH4_7g08590
malus_domestica	MD02G1226900.v1.1 MD07G1083700.v1.1 MD07G1083800.v1.1 MD07G1086200.v1.1 MD07G1086300.v1.1 MD07G1086700.v1.1 MD13G1075600.v1.1
prunus_persica	Prupe.2G112600_v2.0.a1 Prupe.2G112800_v2.0.a1 Prupe.2G113000_v2.0.a1 Prupe.2G113500_v2.0.a1 Prupe.2G113600_v2.0.a1
pyrus_communis	pycom02g19600 pycom02g19610 pycom07g06920 pycom07g06930
rosa_chinensis	RchiOBHm_Chr1g0343261 RchiOBHm_Chr1g0343301 RchiOBHm_Chr1g0343371 RchiOBHm_Chr1g0343431 RchiOBHm_Chr1g0343441 RchiOBHm_Chr1g0343521 RchiOBHm_Chr1g0343691 RchiOBHm_Chr1g0343791
rosa_laevigata	RLG00000028951 RLG00000028953 RLG00000028965 RLG00000028968 RLG00000028969 RLG00000028971 RLG00000028972 RLG00000028974 RLG00000029891
rosa_multiflora	Rmu_sc0000021.1_g000002 Rmu_sc0000335.1_g000046 Rmu_sc0000335.1_g000047 Rmu_sc0000335.1_g000058 Rmu_sc0000335.1_g000061 Rmu_sc0000335.1_g000106 Rmu_sc0000335.1_g000125 Rmu_sc0000544.1_g000010 Rmu_sc0003430.1_g000012 Rmu_sc0005796.1_g000004 Rmu_sc0028268.1_g000001 Rmu_ssc0000259.1_g000038
rosa_roxburghii	Rroxscaffold_2G00110090 Rroxscaffold_4G00310350 Rroxscaffold_4G00310610 Rroxscaffold_4G00310710 Rroxscaffold_4G00310740 Rroxscaffold_4G00310760 Rroxscaffold_4G00321110
rosa_rugosa	Rorug01G0080100 Rorug01G0080200 Rorug01G0166400 Rorug01G0166500 Rorug01G0166500 Rorug01G0166600 Rorug01G0166700 Rorug01G0166800 Rorug01G0168400 Rorug01G0168500 Rorug01G0168800 Rorug03G0241300 Rorug03G0241400 Rorug04G0001200 Rorug06G0031500 Rorug06G0073200 Rorug06G0264000
rosa_samantha	Rh1AG098100 Rh1AG181800 Rh1AG182100 Rh1AG182400 Rh1AG183000 Rh1AG183600 Rh1AG184300 Rh1AG185400 Rh1BG104000 Rh1BG150000 Rh1BG150400 Rh1BG152100 Rh1BG152300 Rh1CG168600 Rh1CG168900 Rh1CG169000 Rh1CG169700 Rh1CG170500 Rh1CG171200 Rh1DG182000 Rh1DG182300 Rh1DG184000 Rh1DG184200
rosa_wichuraiana	Rw0G012940 Rw1G007640 Rw1G007670 Rw1G011320 Rw1G015090 Rw1G015110 Rw1G015130 Rw1G015150 Rw1G015290

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1208
Acc36I	ACCTGC	1 cut(s)	315
Acc65I	GGTACC	1 cut(s)	824
AccB1I	GGYRCC	1 cut(s)	824
AciI	CCGC	1 cut(s)	1577
AclWI	GGATC	3 cut(s)	197, 710, 1624
AcoI	YGGCCR	3 cut(s)	32, 333, 1277
AcsI	RAATTY	2 cut(s)	18, 251
AfaI	GTAC	8 cut(s)	62, 431, 752, 781, 826, 986, 1124, 1615
AfiI	CCNNNNNNNGG	2 cut(s)	352, 1387
AflII	CTTAAG	1 cut(s)	725
AflIII	ACRYGT	1 cut(s)	834
AgsI	TTSAA	5 cut(s)	301, 978, 1181, 1465, 1735
AjiI	CACGTC	1 cut(s)	837
AjnI	CCWGG	4 cut(s)	13, 335, 1359, 1431
Alw21I	GWGCWC	3 cut(s)	457, 555, 1540
Alw26I	GTCTC	4 cut(s)	1057, 1135, 1223, 1644
Alw44I	GTGCAC	1 cut(s)	1536
AlwI	GGATC	3 cut(s)	197, 710, 1624
AoxI	GGCC	6 cut(s)	32, 244, 333, 957, 1001, 1277
ApaLI	GTGCAC	1 cut(s)	1536
ApeKI	GCWGC	1 cut(s)	406
ApoI	RAATTY	2 cut(s)	18, 251
ArsI	GACNNNNNNTTYG	2 cut(s)	1034, 1066
Asp700I	GAANNNNTTC	1 cut(s)	613
Asp718I	GGTACC	1 cut(s)	824
AspA2I	CCTAGG	1 cut(s)	350
AspLEI	GCGC	1 cut(s)	1355
AspS9I	GGNCC	2 cut(s)	244, 419
AsuHPI	GGTGA	8 cut(s)	94, 452, 488, 530, 873, 1244, 1462, 1696
AsuII	TTCGAA	1 cut(s)	255
AvaII	GGWCC	1 cut(s)	419
AvrII	CCTAGG	1 cut(s)	350
BaeGI	GKGCMC	1 cut(s)	1540
BalI	TGGCCA	2 cut(s)	34, 335
BanI	GGYRCC	1 cut(s)	824
BanII	GRGCYC	2 cut(s)	358, 1242
Bbv12I	GWGCWC	3 cut(s)	457, 555, 1540
BbvI	GCAGC	1 cut(s)	393
BccI	CCATC	4 cut(s)	380, 626, 932, 1298
BceAI	ACGGC	1 cut(s)	1298
BciT130I	CCWGG	4 cut(s)	15, 337, 1361, 1433
BclI	TGATCA	2 cut(s)	286, 1738
BcoDI	GTCTC	4 cut(s)	1057, 1135, 1223, 1644
BfaI	CTAG	2 cut(s)	351, 840
BfmI	CTRYAG	1 cut(s)	1488
BfoI	RGCGCY	1 cut(s)	1356
BfrI	CTTAAG	1 cut(s)	725
BfuAI	ACCTGC	1 cut(s)	315
BglII	AGATCT	1 cut(s)	127
BisI	GCNGC	1 cut(s)	407
BlnI	CCTAGG	1 cut(s)	350
BlpI	GCTNAGC	1 cut(s)	1315
BlsI	GCNGC	1 cut(s)	408
BmcAI	AGTACT	2 cut(s)	62, 1124
Bme1390I	CCNGG	4 cut(s)	15, 337, 1361, 1433
Bme18I	GGWCC	1 cut(s)	419
BmgBI	CACGTC	1 cut(s)	837
BmgT120I	GGNCC	2 cut(s)	244, 419
BmiI	GGNNCC	1 cut(s)	826
BmrFI	CCNGG	4 cut(s)	15, 337, 1361, 1433
BmsI	GCATC	5 cut(s)	159, 393, 772, 1014, 1159
BpmI	CTGGAG	1 cut(s)	1602
Bpu1102I	GCTNAGC	1 cut(s)	1315
Bpu14I	TTCGAA	1 cut(s)	255
BpuEI	CTTGAG	1 cut(s)	1664
BsaBI	GATNNNNATC	1 cut(s)	188
BsaI	GGTCTC	2 cut(s)	1135, 1223
BsaJI	CCNNGG	8 cut(s)	35, 77, 350, 828, 954, 1280, 1359, 1676
BsaWI	WCCGGW	1 cut(s)	421
Bsc4I	CCNNNNNNNGG	2 cut(s)	352, 1387
Bse1I	ACTGG	5 cut(s)	35, 446, 704, 945, 1673
Bse8I	GATNNNNATC	1 cut(s)	188
BseBI	CCWGG	4 cut(s)	15, 337, 1361, 1433
BseDI	CCNNGG	8 cut(s)	35, 77, 350, 828, 954, 1280, 1359, 1676
BseGI	GGATG	8 cut(s)	138, 174, 289, 623, 1174, 1309, 1329, 1815
BseJI	GATNNNNATC	1 cut(s)	188
BseLI	CCNNNNNNNGG	2 cut(s)	352, 1387
BseMII	CTCAG	4 cut(s)	507, 880, 1176, 1446
BseNI	ACTGG	5 cut(s)	35, 446, 704, 945, 1673
BseRI	GAGGAG	1 cut(s)	711
BseSI	GKGCMC	1 cut(s)	1540
BseXI	GCAGC	1 cut(s)	393
BseYI	CCCAGC	1 cut(s)	1706
Bsh1285I	CGRYCG	1 cut(s)	426
BshFI	GGCC	6 cut(s)	34, 246, 335, 959, 1003, 1279
BshNI	GGYRCC	1 cut(s)	824
BsiEI	CGRYCG	1 cut(s)	426
BsiHKAI	GWGCWC	3 cut(s)	457, 555, 1540
BsiSI	CCGG	1 cut(s)	422
BslFI	GGGAC	1 cut(s)	684
BslI	CCNNNNNNNGG	2 cut(s)	352, 1387
BsmAI	GTCTC	4 cut(s)	1057, 1135, 1223, 1644
BsmFI	GGGAC	1 cut(s)	684
BsmI	GAATGC	1 cut(s)	1341
BsnI	GGCC	6 cut(s)	34, 246, 335, 959, 1003, 1279
Bso31I	GGTCTC	2 cut(s)	1135, 1223
Bsp119I	TTCGAA	1 cut(s)	255
Bsp1286I	GDGCHC	5 cut(s)	358, 457, 555, 1242, 1540
Bsp143I	GATC	7 cut(s)	127, 189, 286, 603, 702, 1629, 1738
Bsp1720I	GCTNAGC	1 cut(s)	1315
Bsp19I	CCATGG	2 cut(s)	35, 828
BspACI	CCGC	1 cut(s)	1577
BspANI	GGCC	6 cut(s)	34, 246, 335, 959, 1003, 1279
BspCNI	CTCAG	4 cut(s)	508, 879, 1177, 1447
BspHI	TCATGA	4 cut(s)	396, 657, 1507, 1741
BspLI	GGNNCC	1 cut(s)	826
BspMI	ACCTGC	1 cut(s)	315
BspPI	GGATC	3 cut(s)	197, 710, 1624
BspQI	GCTCTTC	1 cut(s)	578
BspT104I	TTCGAA	1 cut(s)	255
BspT107I	GGYRCC	1 cut(s)	824
BspTI	CTTAAG	1 cut(s)	725
BspTNI	GGTCTC	2 cut(s)	1135, 1223
BsrI	ACTGG	5 cut(s)	35, 446, 704, 945, 1673
BssECI	CCNNGG	8 cut(s)	35, 77, 350, 828, 954, 1280, 1359, 1676
BssMI	GATC	7 cut(s)	127, 189, 286, 603, 702, 1629, 1738
BssT1I	CCWWGG	5 cut(s)	35, 77, 350, 828, 1676
Bst2UI	CCWGG	4 cut(s)	15, 337, 1361, 1433
Bst4CI	ACNGT	5 cut(s)	1046, 1068, 1115, 1601, 1613
Bst6I	CTCTTC	3 cut(s)	578, 800, 1797
BstAFI	CTTAAG	1 cut(s)	725
BstBI	TTCGAA	1 cut(s)	255
BstC8I	GCNNGC	3 cut(s)	1452, 1719, 1785
BstDEI	CTNAG	6 cut(s)	516, 866, 918, 1185, 1315, 1455
BstDSI	CCRYGG	3 cut(s)	35, 828, 1280
BstENI	CCTNNNNNAGG	1 cut(s)	1385
BstF5I	GGATG	8 cut(s)	138, 174, 289, 623, 1174, 1309, 1329, 1815
BstH2I	RGCGCY	1 cut(s)	1356
BstHHI	GCGC	1 cut(s)	1355
BstKTI	GATC	7 cut(s)	130, 192, 289, 606, 705, 1632, 1741
BstMAI	GTCTC	4 cut(s)	1057, 1135, 1223, 1644
BstMBI	GATC	7 cut(s)	127, 189, 286, 603, 702, 1629, 1738
BstMCI	CGRYCG	1 cut(s)	426
BstMWI	GCNNNNNNNGC	1 cut(s)	956
BstNI	CCWGG	4 cut(s)	15, 337, 1361, 1433
BstNSI	RCATGY	1 cut(s)	1721
BstSCI	CCNGG	4 cut(s)	13, 335, 1359, 1431
BstSFI	CTRYAG	1 cut(s)	1488
BstSLI	GKGCMC	1 cut(s)	1540
BstV1I	GCAGC	1 cut(s)	393
BstX2I	RGATCY	4 cut(s)	127, 189, 702, 1629
BstYI	RGATCY	4 cut(s)	127, 189, 702, 1629
BsuRI	GGCC	6 cut(s)	34, 246, 335, 959, 1003, 1279
BtgI	CCRYGG	3 cut(s)	35, 828, 1280
BtrI	CACGTC	1 cut(s)	837
BtsCI	GGATG	8 cut(s)	138, 174, 289, 623, 1174, 1309, 1329, 1815
BtsI	GCAGTG	1 cut(s)	673
BtsIMutI	CAGTG	5 cut(s)	513, 673, 938, 1073, 1609
BveI	ACCTGC	1 cut(s)	315
Cac8I	GCNNGC	3 cut(s)	1452, 1719, 1785
CciI	TCATGA	4 cut(s)	396, 657, 1507, 1741
CfoI	GCGC	1 cut(s)	1355
Cfr13I	GGNCC	2 cut(s)	244, 419
CseI	GACGC	1 cut(s)	331
Csp6I	GTAC	8 cut(s)	61, 430, 751, 780, 825, 985, 1123, 1614
CviQI	GTAC	8 cut(s)	61, 430, 751, 780, 825, 985, 1123, 1614
DdeI	CTNAG	6 cut(s)	516, 866, 918, 1185, 1315, 1455
DpnI	GATC	7 cut(s)	129, 191, 288, 605, 704, 1631, 1740
DpnII	GATC	7 cut(s)	127, 189, 286, 603, 702, 1629, 1738
EaeI	YGGCCR	3 cut(s)	32, 333, 1277
Eam1104I	CTCTTC	3 cut(s)	578, 800, 1797
EarI	CTCTTC	3 cut(s)	578, 800, 1797
Eco130I	CCWWGG	5 cut(s)	35, 77, 350, 828, 1676
Eco24I	GRGCYC	2 cut(s)	358, 1242
Eco31I	GGTCTC	2 cut(s)	1135, 1223
Eco32I	GATATC	1 cut(s)	1429
Eco47I	GGWCC	1 cut(s)	419
EcoNI	CCTNNNNNAGG	1 cut(s)	1385
EcoO109I	RGGNCCY	1 cut(s)	244
EcoRI	GAATTC	2 cut(s)	18, 251
EcoRII	CCWGG	4 cut(s)	13, 335, 1359, 1431
EcoRV	GATATC	1 cut(s)	1429
EcoT14I	CCWWGG	5 cut(s)	35, 77, 350, 828, 1676
EcoT22I	ATGCAT	1 cut(s)	1723
EcoT38I	GRGCYC	2 cut(s)	358, 1242
ErhI	CCWWGG	5 cut(s)	35, 77, 350, 828, 1676
FalI	AAGNNNNNCTT	2 cut(s)	1776, 1808
FaqI	GGGAC	1 cut(s)	684
FauI	CCCGC	1 cut(s)	1584
FauNDI	CATATG	1 cut(s)	820
FbaI	TGATCA	2 cut(s)	286, 1738
Fnu4HI	GCNGC	1 cut(s)	407
FokI	GGATG	8 cut(s)	125, 181, 296, 610, 1181, 1316, 1316, 1802
FriOI	GRGCYC	2 cut(s)	358, 1242
Fsp4HI	GCNGC	1 cut(s)	407
FspBI	CTAG	2 cut(s)	351, 840
GlaI	GCGC	1 cut(s)	1354
GluI	GCNGC	1 cut(s)	407
GsaI	CCCAGC	1 cut(s)	1710
GsuI	CTGGAG	1 cut(s)	1602
HaeII	RGCGCY	1 cut(s)	1356
HaeIII	GGCC	6 cut(s)	34, 246, 335, 959, 1003, 1279
HapII	CCGG	1 cut(s)	422
HgaI	GACGC	1 cut(s)	331
HhaI	GCGC	1 cut(s)	1355
Hin6I	GCGC	1 cut(s)	1353
HinP1I	GCGC	1 cut(s)	1353
HincII	GTYRAC	1 cut(s)	265
HindII	GTYRAC	1 cut(s)	265
HinfI	GANTC	5 cut(s)	85, 857, 878, 933, 1273
HpaII	CCGG	1 cut(s)	422
HphI	GGTGA	8 cut(s)	94, 452, 488, 530, 873, 1244, 1462, 1696
Hpy166II	GTNNAC	3 cut(s)	265, 1538, 1654
Hpy188I	TCNGA	5 cut(s)	183, 608, 696, 1035, 1765
Hpy188III	TCNNGA	8 cut(s)	397, 658, 868, 1267, 1369, 1508, 1643, 1742
Hpy8I	GTNNAC	3 cut(s)	265, 1538, 1654
HpyAV	CCTTC	2 cut(s)	113, 1721
HpyCH4III	ACNGT	5 cut(s)	1046, 1068, 1115, 1601, 1613
HpyCH4IV	ACGT	1 cut(s)	836
HpyCH4V	TGCA	8 cut(s)	448, 548, 678, 763, 1120, 1538, 1717, 1721
HpyF10VI	GCNNNNNNNGC	1 cut(s)	956
HpyF3I	CTNAG	6 cut(s)	516, 866, 918, 1185, 1315, 1455
HpySE526I	ACGT	1 cut(s)	836
HspAI	GCGC	1 cut(s)	1353
KpnI	GGTACC	1 cut(s)	828
Ksp22I	TGATCA	2 cut(s)	286, 1738
Kzo9I	GATC	7 cut(s)	127, 189, 286, 603, 702, 1629, 1738
LguI	GCTCTTC	1 cut(s)	578
LmnI	GCTCC	3 cut(s)	51, 79, 177
Lsp1109I	GCAGC	1 cut(s)	393
LweI	GCATC	5 cut(s)	159, 393, 772, 1014, 1159
MaeI	CTAG	2 cut(s)	351, 840
MaeII	ACGT	1 cut(s)	836
MaeIII	GTNAC	4 cut(s)	511, 1006, 1438, 1601
MalI	GATC	7 cut(s)	129, 191, 288, 605, 704, 1631, 1740
MboI	GATC	7 cut(s)	127, 189, 286, 603, 702, 1629, 1738
MboII	GAAGA	8 cut(s)	128, 495, 565, 697, 787, 852, 1639, 1784
MflI	RGATCY	4 cut(s)	127, 189, 702, 1629
MhlI	GDGCHC	5 cut(s)	358, 457, 555, 1242, 1540
MlsI	TGGCCA	2 cut(s)	34, 335
MluCI	AATT	7 cut(s)	18, 251, 372, 522, 773, 784, 1571
MluNI	TGGCCA	2 cut(s)	34, 335
MlyI	GAGTC	1 cut(s)	927
Mox20I	TGGCCA	2 cut(s)	34, 335
Mph1103I	ATGCAT	1 cut(s)	1723
MroXI	GAANNNNTTC	1 cut(s)	613
MscI	TGGCCA	2 cut(s)	34, 335
MseI	TTAA	6 cut(s)	57, 726, 908, 1224, 1335, 1834
MslI	CAYNNNNRTG	2 cut(s)	401, 1746
Msp20I	TGGCCA	2 cut(s)	34, 335
MspA1I	CMGCKG	1 cut(s)	1450
MspCI	CTTAAG	1 cut(s)	725
MspI	CCGG	1 cut(s)	422
MspR9I	CCNGG	4 cut(s)	15, 337, 1361, 1433
Mva1269I	GAATGC	1 cut(s)	1341
MvaI	CCWGG	4 cut(s)	15, 337, 1361, 1433
MwoI	GCNNNNNNNGC	1 cut(s)	956
NcoI	CCATGG	2 cut(s)	35, 828
NdeI	CATATG	1 cut(s)	820
NdeII	GATC	7 cut(s)	127, 189, 286, 603, 702, 1629, 1738
NlaIV	GGNNCC	1 cut(s)	826
NmeAIII	GCCGAG	1 cut(s)	935
NmuCI	GTSAC	1 cut(s)	511
NsiI	ATGCAT	1 cut(s)	1723
NspI	RCATGY	1 cut(s)	1721
NspV	TTCGAA	1 cut(s)	255
PaeI	GCATGC	1 cut(s)	1721
PagI	TCATGA	4 cut(s)	396, 657, 1507, 1741
PciSI	GCTCTTC	1 cut(s)	578
PctI	GAATGC	1 cut(s)	1341
PdmI	GAANNNNTTC	1 cut(s)	613
PfeI	GAWTC	4 cut(s)	85, 857, 878, 1273
PkrI	GCNGC	1 cut(s)	408
PleI	GAGTC	1 cut(s)	927
PpsI	GAGTC	1 cut(s)	927
PsiI	TTATAA	1 cut(s)	1208
Psp6I	CCWGG	4 cut(s)	13, 335, 1359, 1431
PspFI	CCCAGC	1 cut(s)	1706
PspGI	CCWGG	4 cut(s)	13, 335, 1359, 1431
PspN4I	GGNNCC	1 cut(s)	826
PspPI	GGNCC	2 cut(s)	244, 419
PsuI	RGATCY	4 cut(s)	127, 189, 702, 1629
PvuII	CAGCTG	1 cut(s)	1450
RsaI	GTAC	8 cut(s)	62, 431, 752, 781, 826, 986, 1124, 1615
RsaNI	GTAC	8 cut(s)	61, 430, 751, 780, 825, 985, 1123, 1614
RseI	CAYNNNNRTG	2 cut(s)	401, 1746
SapI	GCTCTTC	1 cut(s)	578
SaqAI	TTAA	6 cut(s)	57, 726, 908, 1224, 1335, 1834
SatI	GCNGC	1 cut(s)	407
Sau3AI	GATC	7 cut(s)	127, 189, 286, 603, 702, 1629, 1738
Sau96I	GGNCC	2 cut(s)	244, 419
ScaI	AGTACT	2 cut(s)	62, 1124
SchI	GAGTC	1 cut(s)	927
ScrFI	CCNGG	4 cut(s)	15, 337, 1361, 1433
SduI	GDGCHC	5 cut(s)	358, 457, 555, 1242, 1540
SfaNI	GCATC	5 cut(s)	159, 393, 772, 1014, 1159
SfcI	CTRYAG	1 cut(s)	1488
SfuI	TTCGAA	1 cut(s)	255
SinI	GGWCC	1 cut(s)	419
SmiMI	CAYNNNNRTG	2 cut(s)	401, 1746
SmlI	CTYRAG	2 cut(s)	725, 1643
SmoI	CTYRAG	2 cut(s)	725, 1643
SphI	GCATGC	1 cut(s)	1721
Sse9I	AATT	7 cut(s)	18, 251, 372, 522, 773, 784, 1571
SsiI	CCGC	1 cut(s)	1577
SspI	AATATT	1 cut(s)	1554
SspMI	CTAG	2 cut(s)	351, 840
StyD4I	CCNGG	4 cut(s)	13, 335, 1359, 1431
StyI	CCWWGG	5 cut(s)	35, 77, 350, 828, 1676
TaaI	ACNGT	5 cut(s)	1046, 1068, 1115, 1601, 1613
TaiI	ACGT	1 cut(s)	839
TaqI	TCGA	6 cut(s)	249, 255, 426, 651, 684, 1795
TasI	AATT	7 cut(s)	18, 251, 372, 522, 773, 784, 1571
TatI	WGTACW	3 cut(s)	60, 1122, 1613
TfiI	GAWTC	4 cut(s)	85, 857, 878, 1273
Tru1I	TTAA	6 cut(s)	57, 726, 908, 1224, 1335, 1834
Tru9I	TTAA	6 cut(s)	57, 726, 908, 1224, 1335, 1834
TscAI	CASTG	5 cut(s)	520, 680, 945, 1073, 1616
TseFI	GTSAC	1 cut(s)	511
TseI	GCWGC	1 cut(s)	406
Tsp45I	GTSAC	1 cut(s)	511
TspGWI	ACGGA	2 cut(s)	1551, 1560
TspRI	CASTG	5 cut(s)	520, 680, 945, 1073, 1616
Vha464I	CTTAAG	1 cut(s)	725
VneI	GTGCAC	1 cut(s)	1536
VpaK11BI	GGWCC	1 cut(s)	419
XagI	CCTNNNNNAGG	1 cut(s)	1385
XapI	RAATTY	2 cut(s)	18, 251
XceI	RCATGY	1 cut(s)	1721
XcmI	CCANNNNNNNNNTGG	1 cut(s)	159
XmaJI	CCTAGG	1 cut(s)	350
XmnI	GAANNNNTTC	1 cut(s)	613
XspI	CTAG	2 cut(s)	351, 840
ZrmI	AGTACT	2 cut(s)	62, 1124
Zsp2I	ATGCAT	1 cut(s)	1723

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.