RchiOBHm_Chr1g0343431

Belongs to the sterol desaturase family

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
Physical Location & Seq
Forward (+)
35538279 .. 35544378
6100 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ56996

Sequence Viewer

Length: 1872 bp
ATGGCTTCCAATCCTGGAATTCTGACTGAATTTCCATGGAAACCTCTTGGAAACTTTAAGTACGTGGTGGTGGCTCCCTGGGTGATACACAGCACATACTTGTTCATTTTTAATGACGGAGACAACAGAGATCTATCTTACTTCCTCATATTTCCATTCATGTTGTTTAGGATGCTCCACAACCAGTTATGGATCTCCCTTTCTCGATATAAAACCTCCAAAGGCAGCGGTCGGATCATCGACAAGGGCCTAGAGTTCGAACAAGTTGACAGAGAAAGAAACTGGGATGATCAAATTATAGTCAATGGACTATTGTTCTTCCTAGGCAGCAGGCACTTGCCCGGAGGTGATAACCTGCCGATGTGGAGAGGAGAAGGATTCGTTTTAACATTTCTGCTTCATGTTGGTCCGGTGGAGTTTCTCTACTATTGGTTGCATAGAGCTCTGCACCACCATTACCTTTACTCTCGCTACCATTCTCACCACCATTCCTCCATTGTCACTGAGCCAATTTCTTCTGTTACTCACCCATTTTTGGAGCACATGGCATATTTTCTCCTTTTCTTAATACCCATTTCCACAATGGTATTGACGGGAACAGGTTCAATCATAACCTATGCAGTTTATATTACTTACCTTGACTTTATGAACAACATGGGACACTGTAACTTCGAGCTCATTCCAAAATGGATTTTCTCTCTTTTTCCTCCACTCAAGTATATCATGTATACCCCATCGTACCACTCTTTGCATCACACCCTATTTCGAACCAATTATTGCCTCTTCATGCCACTTTATGATTACATTTATGGCACCATGGAAAAGACTAGTGATGAACTGTATGAATCTTCACTCAGAAGAGACGATGAAGCTCCAGATGTGTTGCATCTAACCCATCTTACAACACCCGACTCCATCTATCAACTTCCATTGGGATTTGCTTCCTTGGCCTCTAAGCCGCACACTTCAACATGGTACATGTGGTTGATGTGGCCTGTCACATTTTGGTCGATGATCCTCACTTGGATTTATGGTCGCACATTTGTGGTTGAGAGGCAGCGGTTTGATAAACTCAAATTACAAACTTGGGCGATCCCAAAATACAATTTGCAATACTCCTTGCCATGGCAAAATGAAGCTATTAACAGTTTGATTGAGGAAGCTATACTTAAAGCAGAGGAAAAGGGTGTCAAAGTTGTAAGTTTGGGGCTCTTGAACCAGGGTGAGGAGCTGAATAGATATGGTGGTCTATATAGTCGGAGATATCCTCAGCTGAAAGTAAAGGTAGTAGATGGAAGTAGCTTAGCTGTGGCTGTAATCCTCAACAGCATACCAAAAGAGACAACCCAAGTTGTTCTTACAGGCAACCTTACAAAGGTCGCTTATGCAATTGCATTTGCTTTGGGCCAGAGGGGCATTGAGGTAGCTACGTTATACAAGGATGAGTATTTGAAGCTCACCAAATCATTAAGTGCTACTAAGAGTGAGGTGGTTCTTGAAAAAGGCTCTGCTTCAAAGATTTGGTTGGTGGGAGACGGATTGAGTAAAGAAGACCAACTAAATGCGCCAAAAGGAACAATGTTTGTTCCCTTCTCCCAATTCCCCCTAAAAAAGTTGCGCAGGGACTGCTTCTACCACTTCACTCCAGCAATGAAGATCCCCAAGTCTCTTGAGAATGTTTACTCGTGTGAGAACTGGTTGCCGAGAAGGGTGATGAGCGCATGTCGCATAGCCGGAATAGTGCATGCCTTGGAAGGTTGGAATGAACATGAGTGTGGTTACGCCATGTCCGACATTGACAAGGTTTGGGAAGCTACGCTTCGACATGGCTTTCAGCCTCTGATCCCCAATGCTACTTCGAACAAATATTAA

Protein Analysis

623

Amino Acids

72.16

Weight (kDa)

8.27

Isoelectric Point (pI)

32.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FA_hydroxylase PF04116 132 - 272 1.4e-20 Fatty acid hydroxylase
CER1-like_C PF12076 451 - 613 5.8e-72 CER1-like, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000300)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G02190 AT1G02190 AT1G02205 AT1G02205 AT1G02205 AT1G02205 AT1G02205 AT2G37700 AT2G37700 AT2G37700 AT2G37700
fragaria_vesca FvH4_1g22160 FvH4_7g08560 FvH4_7g08560 FvH4_7g08560 FvH4_7g08570 FvH4_7g08570 FvH4_7g08590 FvH4_7g08590
malus_domestica MD02G1226900.v1.1 MD07G1083700.v1.1 MD07G1083800.v1.1 MD07G1086200.v1.1 MD07G1086300.v1.1 MD07G1086700.v1.1 MD13G1075600.v1.1
prunus_persica Prupe.2G112600_v2.0.a1 Prupe.2G112800_v2.0.a1 Prupe.2G113000_v2.0.a1 Prupe.2G113500_v2.0.a1 Prupe.2G113600_v2.0.a1
pyrus_communis pycom02g19600 pycom02g19610 pycom07g06920 pycom07g06930
rosa_chinensis RchiOBHm_Chr1g0343261 RchiOBHm_Chr1g0343301 RchiOBHm_Chr1g0343371 RchiOBHm_Chr1g0343431 RchiOBHm_Chr1g0343441 RchiOBHm_Chr1g0343521 RchiOBHm_Chr1g0343691 RchiOBHm_Chr1g0343791
rosa_laevigata RLG00000028951 RLG00000028953 RLG00000028965 RLG00000028968 RLG00000028969 RLG00000028971 RLG00000028972 RLG00000028974 RLG00000029891
rosa_multiflora Rmu_sc0000021.1_g000002 Rmu_sc0000335.1_g000046 Rmu_sc0000335.1_g000047 Rmu_sc0000335.1_g000058 Rmu_sc0000335.1_g000061 Rmu_sc0000335.1_g000106 Rmu_sc0000335.1_g000125 Rmu_sc0000544.1_g000010 Rmu_sc0003430.1_g000012 Rmu_sc0005796.1_g000004 Rmu_sc0028268.1_g000001 Rmu_ssc0000259.1_g000038
rosa_roxburghii Rroxscaffold_2G00110090 Rroxscaffold_4G00310350 Rroxscaffold_4G00310610 Rroxscaffold_4G00310710 Rroxscaffold_4G00310740 Rroxscaffold_4G00310760 Rroxscaffold_4G00321110
rosa_rugosa Rorug01G0080100 Rorug01G0080200 Rorug01G0166400 Rorug01G0166500 Rorug01G0166500 Rorug01G0166600 Rorug01G0166700 Rorug01G0166800 Rorug01G0168400 Rorug01G0168500 Rorug01G0168800 Rorug03G0241300 Rorug03G0241400 Rorug04G0001200 Rorug06G0031500 Rorug06G0073200 Rorug06G0264000
rosa_samantha Rh1AG098100 Rh1AG181800 Rh1AG182100 Rh1AG182400 Rh1AG183000 Rh1AG183600 Rh1AG184300 Rh1AG185400 Rh1BG104000 Rh1BG150000 Rh1BG150400 Rh1BG152100 Rh1BG152300 Rh1CG168600 Rh1CG168900 Rh1CG169000 Rh1CG169700 Rh1CG170500 Rh1CG171200 Rh1DG182000 Rh1DG182300 Rh1DG184000 Rh1DG184200
rosa_wichuraiana Rw0G012940 Rw1G007640 Rw1G007670 Rw1G011320 Rw1G015090 Rw1G015110 Rw1G015130 Rw1G015150 Rw1G015290

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1619
Acc36I ACCTGC 1 cut(s) 363
AccB1I GGYRCC 1 cut(s) 812
AccI GTMKAC 1 cut(s) 728
AciI CCGC 3 cut(s) 228, 959, 1060
AclWI GGATC 6 cut(s) 200, 242, 1009, 1087, 1651, 1837
AcsI RAATTY 2 cut(s) 18, 29
AfaI GTAC 3 cut(s) 62, 740, 977
AfiI CCNNNNNNNGG 4 cut(s) 535, 1125, 1225, 1375
AflIII ACRYGT 1 cut(s) 978
AgsI TTSAA 6 cut(s) 606, 969, 1216, 1453, 1499, 1515
AhlI ACTAGT 1 cut(s) 827
AjnI CCWGG 3 cut(s) 13, 77, 1218
AleI CACNNNNGTG 1 cut(s) 1043
Alw21I GWGCWC 3 cut(s) 445, 543, 678
Alw26I GTCTC 5 cut(s) 114, 855, 1334, 1527, 1671
AlwI GGATC 6 cut(s) 200, 242, 1009, 1087, 1651, 1837
AlwNI CAGNNNCTG 2 cut(s) 1626, 1840
AoxI GGCC 4 cut(s) 247, 948, 992, 1405
ApeKI GCWGC 3 cut(s) 225, 327, 1057
ApoI RAATTY 2 cut(s) 18, 29
Asp700I GAANNNNTTC 1 cut(s) 601
AspA2I CCTAGG 1 cut(s) 322
AspLEI GCGC 3 cut(s) 1567, 1620, 1721
AspS9I GGNCC 3 cut(s) 247, 407, 1405
AsuC2I CCSGG 1 cut(s) 342
AsuHPI GGTGA 7 cut(s) 94, 359, 473, 518, 1235, 1450, 1723
AsuII TTCGAA 3 cut(s) 258, 766, 1859
AvaII GGWCC 1 cut(s) 407
AvrII CCTAGG 1 cut(s) 322
BanI GGYRCC 1 cut(s) 812
BanII GRGCYC 3 cut(s) 445, 678, 1212
BauI CACGAG 1 cut(s) 1684
BbsI GAAGAC 1 cut(s) 1557
Bbv12I GWGCWC 3 cut(s) 445, 543, 678
BbvCI CCTCAGC 1 cut(s) 1269
BbvI GCAGC 3 cut(s) 237, 339, 1069
BccI CCATC 4 cut(s) 742, 903, 923, 1286
BciT130I CCWGG 3 cut(s) 15, 79, 1220
BclI TGATCA 1 cut(s) 289
BcnI CCSGG 1 cut(s) 342
BcoDI GTCTC 5 cut(s) 114, 855, 1334, 1527, 1671
BcuI ACTAGT 1 cut(s) 827
BfaI CTAG 3 cut(s) 251, 323, 828
BfuAI ACCTGC 1 cut(s) 363
BglI GCCNNNNNGGC 1 cut(s) 1413
BglII AGATCT 1 cut(s) 130
BisI GCNGC 4 cut(s) 226, 328, 959, 1058
BlnI CCTAGG 1 cut(s) 322
BlpI GCTNAGC 1 cut(s) 1303
BlsI GCNGC 4 cut(s) 227, 329, 960, 1059
Bme1390I CCNGG 4 cut(s) 15, 79, 342, 1220
Bme18I GGWCC 1 cut(s) 407
BmgT120I GGNCC 3 cut(s) 247, 407, 1405
BmiI GGNNCC 2 cut(s) 75, 814
BmrFI CCNGG 4 cut(s) 15, 79, 342, 1220
BmrI ACTGGG 1 cut(s) 292
BmsI GCATC 3 cut(s) 162, 760, 895
BmuI ACTGGG 1 cut(s) 292
BpiI GAAGAC 1 cut(s) 1557
BplI GAGNNNNNCTC 2 cut(s) 1252, 1284
BpmI CTGGAG 2 cut(s) 858, 1629
Bpu10I CCTNAGC 1 cut(s) 1269
Bpu1102I GCTNAGC 1 cut(s) 1303
Bpu14I TTCGAA 3 cut(s) 258, 766, 1859
BpuEI CTTGAG 2 cut(s) 698, 1691
BpuMI CCSGG 1 cut(s) 342
BsaAI YACGTR 1 cut(s) 64
BsaJI CCNNGG 9 cut(s) 35, 77, 78, 322, 816, 945, 1124, 1219, 1749
BsaWI WCCGGW 1 cut(s) 409
BsaXI ACNNNNNCTCC 2 cut(s) 476, 506
Bsc4I CCNNNNNNNGG 4 cut(s) 535, 1125, 1225, 1375
Bse1I ACTGG 3 cut(s) 184, 287, 1700
Bse3DI GCAATG 1 cut(s) 1656
BseBI CCWGG 3 cut(s) 15, 79, 1220
BseDI CCNNGG 9 cut(s) 35, 77, 78, 322, 816, 945, 1124, 1219, 1749
BseGI GGATG 3 cut(s) 177, 292, 1447
BseLI CCNNNNNNNGG 4 cut(s) 535, 1125, 1225, 1375
BseMI GCAATG 1 cut(s) 1656
BseMII CTCAG 3 cut(s) 495, 868, 1283
BseNI ACTGG 3 cut(s) 184, 287, 1700
BseRI GAGGAG 2 cut(s) 384, 1241
BseXI GCAGC 3 cut(s) 237, 339, 1069
BsgI GTGCAG 1 cut(s) 431
Bsh1285I CGRYCG 1 cut(s) 232
BshFI GGCC 4 cut(s) 249, 950, 994, 1407
BshNI GGYRCC 1 cut(s) 812
BsiEI CGRYCG 1 cut(s) 232
BsiHKAI GWGCWC 3 cut(s) 445, 543, 678
BsiSI CCGG 3 cut(s) 342, 410, 1734
BslFI GGGAC 2 cut(s) 672, 1637
BslI CCNNNNNNNGG 4 cut(s) 535, 1125, 1225, 1375
BsmAI GTCTC 5 cut(s) 114, 855, 1334, 1527, 1671
BsmBI CGTCTC 2 cut(s) 855, 1527
BsmFI GGGAC 2 cut(s) 672, 1637
BsnI GGCC 4 cut(s) 249, 950, 994, 1407
Bsp119I TTCGAA 3 cut(s) 258, 766, 1859
Bsp1286I GDGCHC 4 cut(s) 445, 543, 678, 1212
Bsp143I GATC 8 cut(s) 130, 192, 234, 289, 1014, 1092, 1656, 1842
Bsp1720I GCTNAGC 1 cut(s) 1303
Bsp19I CCATGG 3 cut(s) 35, 816, 1124
BspACI CCGC 3 cut(s) 228, 959, 1060
BspANI GGCC 4 cut(s) 249, 950, 994, 1407
BspCNI CTCAG 3 cut(s) 496, 867, 1282
BspLI GGNNCC 2 cut(s) 75, 814
BspMI ACCTGC 1 cut(s) 363
BspPI GGATC 6 cut(s) 200, 242, 1009, 1087, 1651, 1837
BspT104I TTCGAA 3 cut(s) 258, 766, 1859
BspT107I GGYRCC 1 cut(s) 812
BsrDI GCAATG 1 cut(s) 1656
BsrI ACTGG 3 cut(s) 184, 287, 1700
BssECI CCNNGG 9 cut(s) 35, 77, 78, 322, 816, 945, 1124, 1219, 1749
BssMI GATC 8 cut(s) 130, 192, 234, 289, 1014, 1092, 1656, 1842
BssNAI GTATAC 1 cut(s) 729
BssSI CACGAG 1 cut(s) 1684
BssT1I CCWWGG 6 cut(s) 35, 322, 816, 945, 1124, 1749
Bst1107I GTATAC 1 cut(s) 729
Bst2BI CACGAG 1 cut(s) 1684
Bst2UI CCWGG 3 cut(s) 15, 79, 1220
Bst4CI ACNGT 3 cut(s) 665, 840, 1148
Bst6I CTCTTC 2 cut(s) 788, 853
BstAPI GCANNNNNTGC 1 cut(s) 1626
BstBAI YACGTR 1 cut(s) 64
BstBI TTCGAA 3 cut(s) 258, 766, 1859
BstC8I GCNNGC 2 cut(s) 332, 1746
BstDEI CTNAG 6 cut(s) 504, 854, 954, 1269, 1303, 1479
BstDSI CCRYGG 3 cut(s) 35, 816, 1124
BstENI CCTNNNNNAGG 1 cut(s) 1373
BstF5I GGATG 3 cut(s) 177, 292, 1447
BstHHI GCGC 3 cut(s) 1567, 1620, 1721
BstKTI GATC 8 cut(s) 133, 195, 237, 292, 1017, 1095, 1659, 1845
BstMAI GTCTC 5 cut(s) 114, 855, 1334, 1527, 1671
BstMBI GATC 8 cut(s) 130, 192, 234, 289, 1014, 1092, 1656, 1842
BstMCI CGRYCG 1 cut(s) 232
BstMWI GCNNNNNNNGC 4 cut(s) 947, 1413, 1626, 1725
BstNI CCWGG 3 cut(s) 15, 79, 1220
BstNSI RCATGY 3 cut(s) 982, 1725, 1748
BstSCI CCNGG 4 cut(s) 13, 77, 340, 1218
BstV1I GCAGC 3 cut(s) 237, 339, 1069
BstV2I GAAGAC 1 cut(s) 1557
BstX2I RGATCY 3 cut(s) 130, 192, 1656
BstYI RGATCY 3 cut(s) 130, 192, 1656
BstZ17I GTATAC 1 cut(s) 729
BsuRI GGCC 4 cut(s) 249, 950, 994, 1407
BtgI CCRYGG 3 cut(s) 35, 816, 1124
BtsCI GGATG 3 cut(s) 177, 292, 1447
BtsIMutI CAGTG 2 cut(s) 501, 661
BveI ACCTGC 1 cut(s) 363
Cac8I GCNNGC 2 cut(s) 332, 1746
CaiI CAGNNNCTG 2 cut(s) 1626, 1840
CfoI GCGC 3 cut(s) 1567, 1620, 1721
Cfr13I GGNCC 3 cut(s) 247, 407, 1405
Csp6I GTAC 3 cut(s) 61, 739, 976
CviQI GTAC 3 cut(s) 61, 739, 976
DdeI CTNAG 6 cut(s) 504, 854, 954, 1269, 1303, 1479
DpnI GATC 8 cut(s) 132, 194, 236, 291, 1016, 1094, 1658, 1844
DpnII GATC 8 cut(s) 130, 192, 234, 289, 1014, 1092, 1656, 1842
Eam1104I CTCTTC 2 cut(s) 788, 853
EarI CTCTTC 2 cut(s) 788, 853
Ecl136II GAGCTC 2 cut(s) 443, 676
Eco130I CCWWGG 6 cut(s) 35, 322, 816, 945, 1124, 1749
Eco24I GRGCYC 3 cut(s) 445, 678, 1212
Eco32I GATATC 1 cut(s) 1265
Eco47I GGWCC 1 cut(s) 407
Eco53kI GAGCTC 2 cut(s) 443, 676
EcoICRI GAGCTC 2 cut(s) 443, 676
EcoNI CCTNNNNNAGG 1 cut(s) 1373
EcoO109I RGGNCCY 1 cut(s) 247
EcoRI GAATTC 1 cut(s) 18
EcoRII CCWGG 3 cut(s) 13, 77, 1218
EcoRV GATATC 1 cut(s) 1265
EcoT14I CCWWGG 6 cut(s) 35, 322, 816, 945, 1124, 1749
EcoT38I GRGCYC 3 cut(s) 445, 678, 1212
ErhI CCWWGG 6 cut(s) 35, 322, 816, 945, 1124, 1749
Esp3I CGTCTC 2 cut(s) 855, 1527
FalI AAGNNNNNCTT 6 cut(s) 1152, 1184, 1341, 1373, 1803, 1835
FaqI GGGAC 2 cut(s) 672, 1637
FbaI TGATCA 1 cut(s) 289
FblI GTMKAC 1 cut(s) 728
Fnu4HI GCNGC 4 cut(s) 226, 328, 959, 1058
FokI GGATG 3 cut(s) 184, 299, 1454
FriOI GRGCYC 3 cut(s) 445, 678, 1212
Fsp4HI GCNGC 4 cut(s) 226, 328, 959, 1058
FspBI CTAG 3 cut(s) 251, 323, 828
FspI TGCGCA 1 cut(s) 1619
GlaI GCGC 3 cut(s) 1566, 1619, 1720
GluI GCNGC 4 cut(s) 226, 328, 959, 1058
GsuI CTGGAG 2 cut(s) 858, 1629
HaeIII GGCC 4 cut(s) 249, 950, 994, 1407
HapII CCGG 3 cut(s) 342, 410, 1734
HhaI GCGC 3 cut(s) 1567, 1620, 1721
Hin6I GCGC 3 cut(s) 1565, 1618, 1719
HinP1I GCGC 3 cut(s) 1565, 1618, 1719
HincII GTYRAC 1 cut(s) 268
HindII GTYRAC 1 cut(s) 268
HinfI GANTC 3 cut(s) 378, 845, 911
HpaII CCGG 3 cut(s) 342, 410, 1734
HphI GGTGA 7 cut(s) 94, 359, 473, 518, 1235, 1450, 1723
Hpy166II GTNNAC 3 cut(s) 268, 729, 1681
Hpy188I TCNGA 6 cut(s) 24, 234, 857, 1260, 1792, 1842
Hpy188III TCNNGA 5 cut(s) 204, 875, 1213, 1496, 1670
Hpy8I GTNNAC 3 cut(s) 268, 729, 1681
HpyAV CCTTC 4 cut(s) 368, 1600, 1701, 1748
HpyCH4III ACNGT 3 cut(s) 665, 840, 1148
HpyCH4IV ACGT 2 cut(s) 63, 1430
HpyCH4V TGCA 9 cut(s) 436, 448, 620, 751, 886, 1111, 1388, 1394, 1744
HpyF10VI GCNNNNNNNGC 4 cut(s) 947, 1413, 1626, 1725
HpyF3I CTNAG 6 cut(s) 504, 854, 954, 1269, 1303, 1479
HpySE526I ACGT 2 cut(s) 63, 1430
HspAI GCGC 3 cut(s) 1565, 1618, 1719
Ksp22I TGATCA 1 cut(s) 289
Kzo9I GATC 8 cut(s) 130, 192, 234, 289, 1014, 1092, 1656, 1842
LmnI GCTCC 5 cut(s) 79, 180, 538, 877, 1228
Lsp1109I GCAGC 3 cut(s) 237, 339, 1069
LweI GCATC 3 cut(s) 162, 760, 895
MaeI CTAG 3 cut(s) 251, 323, 828
MaeII ACGT 2 cut(s) 63, 1430
MaeIII GTNAC 5 cut(s) 499, 520, 665, 997, 1778
MalI GATC 8 cut(s) 132, 194, 236, 291, 1016, 1094, 1658, 1844
MboI GATC 8 cut(s) 130, 192, 234, 289, 1014, 1092, 1656, 1842
MboII GAAGA 7 cut(s) 310, 507, 775, 840, 870, 1562, 1666
MfeI CAATTG 1 cut(s) 1389
MflI RGATCY 3 cut(s) 130, 192, 1656
MhlI GDGCHC 4 cut(s) 445, 543, 678, 1212
MluCI AATT 9 cut(s) 18, 29, 294, 510, 772, 1076, 1105, 1389, 1598
MlyI GAGTC 1 cut(s) 905
MmeI TCCRAC 4 cut(s) 212, 1238, 1739, 1815
MroXI GAANNNNTTC 1 cut(s) 601
MseI TTAA 8 cut(s) 57, 111, 386, 566, 1143, 1170, 1469, 1870
MslI CAYNNNNRTG 2 cut(s) 1043, 1773
MspA1I CMGCKG 3 cut(s) 228, 1060, 1273
MspI CCGG 3 cut(s) 342, 410, 1734
MspR9I CCNGG 4 cut(s) 15, 79, 342, 1220
MunI CAATTG 1 cut(s) 1389
MvaI CCWGG 3 cut(s) 15, 79, 1220
MwoI GCNNNNNNNGC 4 cut(s) 947, 1413, 1626, 1725
NciI CCSGG 1 cut(s) 342
NcoI CCATGG 3 cut(s) 35, 816, 1124
NdeII GATC 8 cut(s) 130, 192, 234, 289, 1014, 1092, 1656, 1842
NlaIV GGNNCC 2 cut(s) 75, 814
NmeAIII GCCGAG 1 cut(s) 1728
NmuCI GTSAC 2 cut(s) 499, 997
NsbI TGCGCA 1 cut(s) 1619
NspI RCATGY 3 cut(s) 982, 1725, 1748
NspV TTCGAA 3 cut(s) 258, 766, 1859
OliI CACNNNNGTG 1 cut(s) 1043
PaeI GCATGC 1 cut(s) 1748
PasI CCCWGGG 1 cut(s) 78
PciI ACATGT 1 cut(s) 978
PcsI WCGNNNNNNNCGW 1 cut(s) 1788
PdmI GAANNNNTTC 1 cut(s) 601
PfeI GAWTC 2 cut(s) 378, 845
PfoI TCCNGGA 1 cut(s) 13
PkrI GCNGC 4 cut(s) 227, 329, 960, 1059
PleI GAGTC 1 cut(s) 905
PpsI GAGTC 1 cut(s) 905
Ppu21I YACGTR 1 cut(s) 64
PscI ACATGT 1 cut(s) 978
Psp124BI GAGCTC 2 cut(s) 445, 678
Psp6I CCWGG 3 cut(s) 13, 77, 1218
PspGI CCWGG 3 cut(s) 13, 77, 1218
PspN4I GGNNCC 2 cut(s) 75, 814
PspPI GGNCC 3 cut(s) 247, 407, 1405
PstNI CAGNNNCTG 2 cut(s) 1626, 1840
PsuI RGATCY 3 cut(s) 130, 192, 1656
PvuII CAGCTG 1 cut(s) 1273
RsaI GTAC 3 cut(s) 62, 740, 977
RsaNI GTAC 3 cut(s) 61, 739, 976
RseI CAYNNNNRTG 2 cut(s) 1043, 1773
SacI GAGCTC 2 cut(s) 445, 678
SaqAI TTAA 8 cut(s) 57, 111, 386, 566, 1143, 1170, 1469, 1870
SatI GCNGC 4 cut(s) 226, 328, 959, 1058
Sau3AI GATC 8 cut(s) 130, 192, 234, 289, 1014, 1092, 1656, 1842
Sau96I GGNCC 3 cut(s) 247, 407, 1405
SchI GAGTC 1 cut(s) 905
ScrFI CCNGG 4 cut(s) 15, 79, 342, 1220
SduI GDGCHC 4 cut(s) 445, 543, 678, 1212
SfaNI GCATC 3 cut(s) 162, 760, 895
SfuI TTCGAA 3 cut(s) 258, 766, 1859
SinI GGWCC 1 cut(s) 407
SmiMI CAYNNNNRTG 2 cut(s) 1043, 1773
SmlI CTYRAG 2 cut(s) 713, 1670
SmoI CTYRAG 2 cut(s) 713, 1670
SpeI ACTAGT 1 cut(s) 827
SphI GCATGC 1 cut(s) 1748
Sse9I AATT 9 cut(s) 18, 29, 294, 510, 772, 1076, 1105, 1389, 1598
SsiI CCGC 3 cut(s) 228, 959, 1060
SspI AATATT 1 cut(s) 1868
SspMI CTAG 3 cut(s) 251, 323, 828
SstI GAGCTC 2 cut(s) 445, 678
StyD4I CCNGG 4 cut(s) 13, 77, 340, 1218
StyI CCWWGG 6 cut(s) 35, 322, 816, 945, 1124, 1749
TaaI ACNGT 3 cut(s) 665, 840, 1148
TaiI ACGT 2 cut(s) 66, 1433
TaqI TCGA 8 cut(s) 205, 240, 258, 672, 766, 1010, 1822, 1859
TasI AATT 9 cut(s) 18, 29, 294, 510, 772, 1076, 1105, 1389, 1598
TauI GCSGC 1 cut(s) 961
TfiI GAWTC 2 cut(s) 378, 845
Tru1I TTAA 8 cut(s) 57, 111, 386, 566, 1143, 1170, 1469, 1870
Tru9I TTAA 8 cut(s) 57, 111, 386, 566, 1143, 1170, 1469, 1870
TscAI CASTG 2 cut(s) 508, 668
TseFI GTSAC 2 cut(s) 499, 997
TseI GCWGC 3 cut(s) 225, 327, 1057
Tsp45I GTSAC 2 cut(s) 499, 997
TspGWI ACGGA 2 cut(s) 132, 1551
TspRI CASTG 2 cut(s) 508, 668
VpaK11BI GGWCC 1 cut(s) 407
XagI CCTNNNNNAGG 1 cut(s) 1373
XapI RAATTY 2 cut(s) 18, 29
XceI RCATGY 3 cut(s) 982, 1725, 1748
XcmI CCANNNNNNNNNTGG 1 cut(s) 580
XmaJI CCTAGG 1 cut(s) 322
XmiI GTMKAC 1 cut(s) 728
XmnI GAANNNNTTC 1 cut(s) 601
XspI CTAG 3 cut(s) 251, 323, 828
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.