Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1D

Orthogroup ID

OG0000300

Physical Location & Seq

Genomic Coordinates Reverse (-)

37205830 .. 37209980

Gene Structure 4151 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1DG184200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1878 bp

ATGGCTTCCACACCTGGAATTCTTACTGACTGGCCATGGACACCTCTTGGGAGCTTTAAGCACGCGGTATTAGCTCCTTGGGTGATTCACAGCACATACTCACATATGTTTGGAAAAGAAGGCACAGATCTATTTTACATCCTCGTATTTCCATTTCTGTTGTGGAGGATGCTCCACAACCAGATATGGATCTCACTTTCTCGCTATCAAACTGCCAAAGGCAAAGGAACAATCGTGGACAAGGGCCTCGAATTTGAACAAGTCGACAGAGAAAGAGATTGGGATGATCAAATCATATTCAATGGAATGCTGTTTTACATAGGCAGGTTTCTGGCCAGGTGCGTCCTGCCTAGGGCTCAAACTGACCTACCAATTTGGAGGGGAGATGGGTTGGTCGTGACGATGCTGCTTCATGCTGGTCCGGTCGAGTATCTCTACTACTGGTTACACAGAGCACTTCACCACCATTTCCTCTACTCTCGCTACCATTCTCATCACCATTCCTCCATTGTCACTGAGCCAATTACTTCTGTGACTCACCCATTTGCGGAGCACATAACATATTTCATGCTCTTCGCAATACCAATGGTGGCAACTCTGTTGATCGGAACAGCTTCCATCTCATCCTATTTTGTTTATATTACTTATATCGACTTCATGAACAACTTGGGGCACTGCAATTTCGAGTTCATTCCGAACTGGATCTTCTGTCTTTTTCCTCCTATTAAGTATCTAATATATACTCCCTCGTACCACTCTTTGCATCACACACAATTTCGAACCAATTACTCCCTCTTCATGCCAGTCTATGACTATATATATGGTACCATGGACAAGTCTAGTGATACCCTACATGAATCTTCACTCAGGAAAGAGGAATCACCTGATGTGGTTCATCTAACCCATTTAACAACAACTAAATCCATCTACCGACTCCCACTGGCATTTGCTTCCTTGGCCTCTAATCCACACACTTCAACATGGTACTTATGGTTGTTGTGGCCGGTGACATTATGGTCCTTGATGCTAACTTGGATATTTGACCGTTCATTTGTTATTGAGAGGCAGCGTTTTGATAAACACAGACTACAAACTTGGGTTATTCCAAAATATAGTTTGCAGTACTTGCTCTCATGGCACAATGAAGCTATAAACAGAGCGATTGAGGATGCCATACTTGAAGCTGAGCAAATGGGTGTCAAAGTTATAAGTTTAGGTCTCTTTAATCAGGGTGAGGGGCTCAATAATTATGGTGGTATATATGTCCAGAGGAATCCACGGTTGAAAGTCAAGGTGGTGGATGGGAGTAGCTTAACTGTGGCCGTCATCCTTAACAGCATTCCGAAAGGGACAACCCAGGTTCTCCTTACAGGCAACCTCACAAAGGTTGCTTATGCGCTTGCCTTTTCTTTGTGCCAGAGAGATATCCAGGTAGTTACATTACAGCAGGCTGAGTATTTGAAGCTCACCAAATCATTAAATACTACAGAGGGTAAGGTGGTTCATGACAGAAGCTATGCTCAAAAGATTTGGTTGGTGGGAGATGGGTTGAGTAAAAAAGAACAGTTGAGTGCACCAAAAGGAACAATTTTTGTTCCCTTCTCTCAATTTCCACCAAAACAGTTGCGCAGAGACTGCCTCTACCACTACACACCAGCAATGAAGATCCCCAAGTCTCTTGAGAATGTTTACTCTTGTGAGAACTGGTTGCCAAGGAGGGTGATGAGTGCGTGGCGTATAGCAGGAATAGTGCATGCATTGGAAGGTTGGAATGAGCACGAGTGTGGTCACACCATGTCCAGCATTGACAAAGTTTGGCAAGCAACTCTTCGACATGGCTTTCAGCCTCTAATCTCCAAAGAGGCAAAGATTGATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0006629 GO:0008150 GO:0008152 GO:0012505 GO:0016020 GO:0016491 GO:0031984 GO:0042175 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044238 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0055114 GO:0071704 GO:0098827

KEGG Pathways

Metabolic & Signaling

ko00073 ko01110 map00073 map01110

Pfam Domains

Protein Families

FA_hydroxylase Wax2_C

Protein Analysis

625

Amino Acids

72.43

Weight (kDa)

8.78

Isoelectric Point (pI)

30.64

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FA_hydroxylase	PF04116	140 - 276	1.4e-20	Fatty acid hydroxylase
CER1-like_C	PF12076	454 - 616	2.9e-74	CER1-like, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000300)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G02190 AT1G02190 AT1G02205 AT1G02205 AT1G02205 AT1G02205 AT1G02205 AT2G37700 AT2G37700 AT2G37700 AT2G37700
fragaria_vesca	FvH4_1g22160 FvH4_7g08560 FvH4_7g08560 FvH4_7g08560 FvH4_7g08570 FvH4_7g08570 FvH4_7g08590 FvH4_7g08590
malus_domestica	MD02G1226900.v1.1 MD07G1083700.v1.1 MD07G1083800.v1.1 MD07G1086200.v1.1 MD07G1086300.v1.1 MD07G1086700.v1.1 MD13G1075600.v1.1
prunus_persica	Prupe.2G112600_v2.0.a1 Prupe.2G112800_v2.0.a1 Prupe.2G113000_v2.0.a1 Prupe.2G113500_v2.0.a1 Prupe.2G113600_v2.0.a1
pyrus_communis	pycom02g19600 pycom02g19610 pycom07g06920 pycom07g06930
rosa_chinensis	RchiOBHm_Chr1g0343261 RchiOBHm_Chr1g0343301 RchiOBHm_Chr1g0343371 RchiOBHm_Chr1g0343431 RchiOBHm_Chr1g0343441 RchiOBHm_Chr1g0343521 RchiOBHm_Chr1g0343691 RchiOBHm_Chr1g0343791
rosa_laevigata	RLG00000028951 RLG00000028953 RLG00000028965 RLG00000028968 RLG00000028969 RLG00000028971 RLG00000028972 RLG00000028974 RLG00000029891
rosa_multiflora	Rmu_sc0000021.1_g000002 Rmu_sc0000335.1_g000046 Rmu_sc0000335.1_g000047 Rmu_sc0000335.1_g000058 Rmu_sc0000335.1_g000061 Rmu_sc0000335.1_g000106 Rmu_sc0000335.1_g000125 Rmu_sc0000544.1_g000010 Rmu_sc0003430.1_g000012 Rmu_sc0005796.1_g000004 Rmu_sc0028268.1_g000001 Rmu_ssc0000259.1_g000038
rosa_roxburghii	Rroxscaffold_2G00110090 Rroxscaffold_4G00310350 Rroxscaffold_4G00310610 Rroxscaffold_4G00310710 Rroxscaffold_4G00310740 Rroxscaffold_4G00310760 Rroxscaffold_4G00321110
rosa_rugosa	Rorug01G0080100 Rorug01G0080200 Rorug01G0166400 Rorug01G0166500 Rorug01G0166500 Rorug01G0166600 Rorug01G0166700 Rorug01G0166800 Rorug01G0168400 Rorug01G0168500 Rorug01G0168800 Rorug03G0241300 Rorug03G0241400 Rorug04G0001200 Rorug06G0031500 Rorug06G0073200 Rorug06G0264000
rosa_samantha	Rh1AG098100 Rh1AG181800 Rh1AG182100 Rh1AG182400 Rh1AG183000 Rh1AG183600 Rh1AG184300 Rh1AG185400 Rh1BG104000 Rh1BG150000 Rh1BG150400 Rh1BG152100 Rh1BG152300 Rh1CG168600 Rh1CG168900 Rh1CG169000 Rh1CG169700 Rh1CG170500 Rh1CG171200 Rh1DG182000 Rh1DG182300 Rh1DG184000 Rh1DG184200
rosa_wichuraiana	Rw0G012940 Rw1G007640 Rw1G007670 Rw1G011320 Rw1G015090 Rw1G015110 Rw1G015130 Rw1G015150 Rw1G015290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1208
AasI	GACNNNNNNGTC	1 cut(s)	1015
Acc16I	TGCGCA	1 cut(s)	1628
Acc36I	ACCTGC	1 cut(s)	315
Acc65I	GGTACC	1 cut(s)	824
AccB1I	GGYRCC	1 cut(s)	824
AccI	GTMKAC	1 cut(s)	264
AccII	CGCG	1 cut(s)	65
AciI	CCGC	2 cut(s)	65, 548
AclWI	GGATC	3 cut(s)	197, 710, 1660
AcoI	YGGCCR	4 cut(s)	32, 333, 1001, 1320
AcsI	RAATTY	2 cut(s)	18, 251
AfaI	GTAC	4 cut(s)	752, 826, 986, 1124
AfiI	CCNNNNNNNGG	3 cut(s)	352, 547, 1384
AgsI	TTSAA	6 cut(s)	257, 301, 978, 1181, 1285, 1462
AjnI	CCWGG	4 cut(s)	13, 335, 1356, 1428
AleI	CACNNNNGTG	1 cut(s)	1782
AluBI	AGCT	8 cut(s)	54, 74, 614, 1148, 1184, 1311, 1465, 1515
AluI	AGCT	8 cut(s)	54, 74, 614, 1148, 1184, 1311, 1465, 1515
Alw21I	GWGCWC	4 cut(s)	457, 555, 1576, 1779
Alw26I	GTCTC	3 cut(s)	1223, 1626, 1680
Alw44I	GTGCAC	1 cut(s)	1572
AlwI	GGATC	3 cut(s)	197, 710, 1660
AlwNI	CAGNNNCTG	1 cut(s)	1635
AoxI	GGCC	6 cut(s)	32, 244, 333, 957, 1001, 1320
ApaLI	GTGCAC	1 cut(s)	1572
ApeKI	GCWGC	2 cut(s)	406, 1066
ApoI	RAATTY	2 cut(s)	18, 251
ArsI	GACNNNNNNTTYG	2 cut(s)	1034, 1066
Asp700I	GAANNNNTTC	1 cut(s)	613
Asp718I	GGTACC	1 cut(s)	824
AspA2I	CCTAGG	1 cut(s)	350
AspLEI	GCGC	2 cut(s)	1399, 1629
AspS9I	GGNCC	3 cut(s)	244, 419, 1017
AsuHPI	GGTGA	9 cut(s)	94, 452, 488, 530, 873, 1018, 1244, 1459, 1732
AsuII	TTCGAA	1 cut(s)	778
AvaII	GGWCC	2 cut(s)	419, 1017
AvrII	CCTAGG	1 cut(s)	350
BaeGI	GKGCMC	2 cut(s)	675, 1576
BalI	TGGCCA	2 cut(s)	34, 335
BanI	GGYRCC	1 cut(s)	824
BanII	GRGCYC	2 cut(s)	358, 1242
BauI	CACGAG	1 cut(s)	1778
Bbv12I	GWGCWC	4 cut(s)	457, 555, 1576, 1779
BbvI	GCAGC	2 cut(s)	393, 1078
BccI	CCATC	5 cut(s)	380, 626, 932, 1295, 1538
BceAI	ACGGC	1 cut(s)	1307
BciT130I	CCWGG	4 cut(s)	15, 337, 1358, 1430
BclI	TGATCA	1 cut(s)	286
BcoDI	GTCTC	3 cut(s)	1223, 1626, 1680
BfaI	CTAG	2 cut(s)	351, 840
BfmI	CTRYAG	1 cut(s)	1485
BfuAI	ACCTGC	1 cut(s)	315
BglII	AGATCT	1 cut(s)	127
BisI	GCNGC	2 cut(s)	407, 1067
BlnI	CCTAGG	1 cut(s)	350
BlpI	GCTNAGC	1 cut(s)	1185
BlsI	GCNGC	2 cut(s)	408, 1068
BmcAI	AGTACT	1 cut(s)	1124
Bme1390I	CCNGG	4 cut(s)	15, 337, 1358, 1430
Bme18I	GGWCC	2 cut(s)	419, 1017
BmgT120I	GGNCC	3 cut(s)	244, 419, 1017
BmiI	GGNNCC	1 cut(s)	826
BmrFI	CCNGG	4 cut(s)	15, 337, 1358, 1430
BmsI	GCATC	5 cut(s)	159, 393, 772, 1014, 1159
BplI	GAGNNNNNCTC	2 cut(s)	1623, 1655
Bpu1102I	GCTNAGC	1 cut(s)	1185
Bpu14I	TTCGAA	1 cut(s)	778
BpuEI	CTTGAG	1 cut(s)	1700
BsaBI	GATNNNNATC	1 cut(s)	188
BsaI	GGTCTC	1 cut(s)	1223
BsaJI	CCNNGG	8 cut(s)	35, 77, 350, 828, 954, 1277, 1356, 1712
BsaWI	WCCGGW	1 cut(s)	421
BsaXI	ACNNNNNCTCC	2 cut(s)	488, 518
Bsc4I	CCNNNNNNNGG	3 cut(s)	352, 547, 1384
Bse118I	RCCGGY	1 cut(s)	1003
Bse1I	ACTGG	6 cut(s)	35, 446, 704, 803, 945, 1709
Bse3DI	GCAATG	1 cut(s)	1665
Bse8I	GATNNNNATC	1 cut(s)	188
BseBI	CCWGG	4 cut(s)	15, 337, 1358, 1430
BseDI	CCNNGG	8 cut(s)	35, 77, 350, 828, 954, 1277, 1356, 1712
BseGI	GGATG	7 cut(s)	138, 174, 289, 623, 1174, 1306, 1326
BseJI	GATNNNNATC	1 cut(s)	188
BseLI	CCNNNNNNNGG	3 cut(s)	352, 547, 1384
BseMI	GCAATG	1 cut(s)	1665
BseMII	CTCAG	4 cut(s)	507, 880, 1176, 1443
BseNI	ACTGG	6 cut(s)	35, 446, 704, 803, 945, 1709
BseSI	GKGCMC	2 cut(s)	675, 1576
BseXI	GCAGC	2 cut(s)	393, 1078
Bsh1236I	CGCG	1 cut(s)	65
Bsh1285I	CGRYCG	1 cut(s)	426
BshFI	GGCC	6 cut(s)	34, 246, 335, 959, 1003, 1322
BshNI	GGYRCC	1 cut(s)	824
BsiEI	CGRYCG	1 cut(s)	426
BsiHKAI	GWGCWC	4 cut(s)	457, 555, 1576, 1779
BsiSI	CCGG	2 cut(s)	422, 1004
BslFI	GGGAC	1 cut(s)	1363
BslI	CCNNNNNNNGG	3 cut(s)	352, 547, 1384
BsmAI	GTCTC	3 cut(s)	1223, 1626, 1680
BsmFI	GGGAC	1 cut(s)	1363
BsmI	GAATGC	2 cut(s)	312, 1338
BsnI	GGCC	6 cut(s)	34, 246, 335, 959, 1003, 1322
Bso31I	GGTCTC	1 cut(s)	1223
Bsp119I	TTCGAA	1 cut(s)	778
Bsp1286I	GDGCHC	7 cut(s)	358, 457, 555, 675, 1242, 1576, 1779
Bsp143I	GATC	6 cut(s)	127, 189, 286, 603, 702, 1665
Bsp1720I	GCTNAGC	1 cut(s)	1185
Bsp19I	CCATGG	2 cut(s)	35, 828
BspACI	CCGC	2 cut(s)	65, 548
BspANI	GGCC	6 cut(s)	34, 246, 335, 959, 1003, 1322
BspCNI	CTCAG	4 cut(s)	508, 879, 1177, 1444
BspFNI	CGCG	1 cut(s)	65
BspHI	TCATGA	2 cut(s)	657, 1504
BspLI	GGNNCC	1 cut(s)	826
BspMI	ACCTGC	1 cut(s)	315
BspPI	GGATC	3 cut(s)	197, 710, 1660
BspQI	GCTCTTC	1 cut(s)	578
BspT104I	TTCGAA	1 cut(s)	778
BspT107I	GGYRCC	1 cut(s)	824
BspTNI	GGTCTC	1 cut(s)	1223
BsrDI	GCAATG	1 cut(s)	1665
BsrFI	RCCGGY	1 cut(s)	1003
BsrI	ACTGG	6 cut(s)	35, 446, 704, 803, 945, 1709
BssAI	RCCGGY	1 cut(s)	1003
BssECI	CCNNGG	8 cut(s)	35, 77, 350, 828, 954, 1277, 1356, 1712
BssMI	GATC	6 cut(s)	127, 189, 286, 603, 702, 1665
BssSI	CACGAG	1 cut(s)	1778
BssT1I	CCWWGG	6 cut(s)	35, 77, 350, 828, 954, 1712
Bst2BI	CACGAG	1 cut(s)	1778
Bst2UI	CCWGG	4 cut(s)	15, 337, 1358, 1430
Bst4CI	ACNGT	5 cut(s)	1046, 1281, 1318, 1566, 1623
Bst6I	CTCTTC	3 cut(s)	578, 800, 1833
BstAPI	GCANNNNNTGC	2 cut(s)	1126, 1635
BstBI	TTCGAA	1 cut(s)	778
BstC8I	GCNNGC	5 cut(s)	63, 1401, 1449, 1755, 1821
BstDEI	CTNAG	4 cut(s)	516, 866, 1185, 1452
BstDSI	CCRYGG	3 cut(s)	35, 828, 1277
BstENI	CCTNNNNNAGG	1 cut(s)	1382
BstF5I	GGATG	7 cut(s)	138, 174, 289, 623, 1174, 1306, 1326
BstFNI	CGCG	1 cut(s)	65
BstHHI	GCGC	2 cut(s)	1399, 1629
BstKTI	GATC	6 cut(s)	130, 192, 289, 606, 705, 1668
BstMAI	GTCTC	3 cut(s)	1223, 1626, 1680
BstMBI	GATC	6 cut(s)	127, 189, 286, 603, 702, 1665
BstMCI	CGRYCG	1 cut(s)	426
BstMWI	GCNNNNNNNGC	5 cut(s)	71, 956, 1126, 1135, 1635
BstNI	CCWGG	4 cut(s)	15, 337, 1358, 1430
BstNSI	RCATGY	1 cut(s)	1757
BstSCI	CCNGG	4 cut(s)	13, 335, 1356, 1428
BstSFI	CTRYAG	1 cut(s)	1485
BstSLI	GKGCMC	2 cut(s)	675, 1576
BstUI	CGCG	1 cut(s)	65
BstV1I	GCAGC	2 cut(s)	393, 1078
BstX2I	RGATCY	4 cut(s)	127, 189, 702, 1665
BstYI	RGATCY	4 cut(s)	127, 189, 702, 1665
BsuRI	GGCC	6 cut(s)	34, 246, 335, 959, 1003, 1322
BtgI	CCRYGG	3 cut(s)	35, 828, 1277
BtsCI	GGATG	7 cut(s)	138, 174, 289, 623, 1174, 1306, 1326
BtsI	GCAGTG	1 cut(s)	673
BtsIMutI	CAGTG	3 cut(s)	513, 673, 938
BveI	ACCTGC	1 cut(s)	315
Cac8I	GCNNGC	5 cut(s)	63, 1401, 1449, 1755, 1821
CaiI	CAGNNNCTG	1 cut(s)	1635
CciI	TCATGA	2 cut(s)	657, 1504
CfoI	GCGC	2 cut(s)	1399, 1629
Cfr10I	RCCGGY	1 cut(s)	1003
Cfr13I	GGNCC	3 cut(s)	244, 419, 1017
CseI	GACGC	1 cut(s)	331
Csp6I	GTAC	4 cut(s)	751, 825, 985, 1123
CviQI	GTAC	4 cut(s)	751, 825, 985, 1123
DdeI	CTNAG	4 cut(s)	516, 866, 1185, 1452
DpnI	GATC	6 cut(s)	129, 191, 288, 605, 704, 1667
DpnII	GATC	6 cut(s)	127, 189, 286, 603, 702, 1665
DrdI	GACNNNNNNGTC	1 cut(s)	1015
DseDI	GACNNNNNNGTC	1 cut(s)	1015
EaeI	YGGCCR	4 cut(s)	32, 333, 1001, 1320
Eam1104I	CTCTTC	3 cut(s)	578, 800, 1833
EarI	CTCTTC	3 cut(s)	578, 800, 1833
Eco130I	CCWWGG	6 cut(s)	35, 77, 350, 828, 954, 1712
Eco24I	GRGCYC	2 cut(s)	358, 1242
Eco31I	GGTCTC	1 cut(s)	1223
Eco32I	GATATC	1 cut(s)	1426
Eco47I	GGWCC	2 cut(s)	419, 1017
EcoNI	CCTNNNNNAGG	1 cut(s)	1382
EcoO109I	RGGNCCY	1 cut(s)	244
EcoRI	GAATTC	1 cut(s)	18
EcoRII	CCWGG	4 cut(s)	13, 335, 1356, 1428
EcoRV	GATATC	1 cut(s)	1426
EcoT14I	CCWWGG	6 cut(s)	35, 77, 350, 828, 954, 1712
EcoT22I	ATGCAT	1 cut(s)	1759
EcoT38I	GRGCYC	2 cut(s)	358, 1242
ErhI	CCWWGG	6 cut(s)	35, 77, 350, 828, 954, 1712
FalI	AAGNNNNNCTT	2 cut(s)	1812, 1844
FaqI	GGGAC	1 cut(s)	1363
FauNDI	CATATG	1 cut(s)	105
FbaI	TGATCA	1 cut(s)	286
FblI	GTMKAC	1 cut(s)	264
Fnu4HI	GCNGC	2 cut(s)	407, 1067
FokI	GGATG	7 cut(s)	125, 181, 296, 610, 1181, 1313, 1313
FriOI	GRGCYC	2 cut(s)	358, 1242
Fsp4HI	GCNGC	2 cut(s)	407, 1067
FspBI	CTAG	2 cut(s)	351, 840
FspI	TGCGCA	1 cut(s)	1628
GlaI	GCGC	2 cut(s)	1398, 1628
GluI	GCNGC	2 cut(s)	407, 1067
HaeIII	GGCC	6 cut(s)	34, 246, 335, 959, 1003, 1322
HapII	CCGG	2 cut(s)	422, 1004
HgaI	GACGC	1 cut(s)	331
HhaI	GCGC	2 cut(s)	1399, 1629
Hin6I	GCGC	2 cut(s)	1397, 1627
HinP1I	GCGC	2 cut(s)	1397, 1627
HincII	GTYRAC	1 cut(s)	265
HindII	GTYRAC	1 cut(s)	265
HinfI	GANTC	6 cut(s)	85, 535, 857, 878, 933, 1273
HpaII	CCGG	2 cut(s)	422, 1004
HphI	GGTGA	9 cut(s)	94, 452, 488, 530, 873, 1018, 1244, 1459, 1732
Hpy166II	GTNNAC	4 cut(s)	238, 265, 1574, 1690
Hpy188I	TCNGA	3 cut(s)	608, 696, 1344
Hpy188III	TCNNGA	6 cut(s)	397, 658, 868, 1267, 1505, 1679
Hpy8I	GTNNAC	4 cut(s)	238, 265, 1574, 1690
HpyAV	CCTTC	3 cut(s)	113, 1609, 1757
HpyCH4III	ACNGT	5 cut(s)	1046, 1281, 1318, 1566, 1623
HpyCH4V	TGCA	6 cut(s)	678, 763, 1120, 1574, 1753, 1757
HpyF10VI	GCNNNNNNNGC	5 cut(s)	71, 956, 1126, 1135, 1635
HpyF3I	CTNAG	4 cut(s)	516, 866, 1185, 1452
HspAI	GCGC	2 cut(s)	1397, 1627
KpnI	GGTACC	1 cut(s)	828
Ksp22I	TGATCA	1 cut(s)	286
Kzo9I	GATC	6 cut(s)	127, 189, 286, 603, 702, 1665
LguI	GCTCTTC	1 cut(s)	578
LmnI	GCTCC	4 cut(s)	51, 79, 177, 550
Lsp1109I	GCAGC	2 cut(s)	393, 1078
LweI	GCATC	5 cut(s)	159, 393, 772, 1014, 1159
MaeI	CTAG	2 cut(s)	351, 840
MaeIII	GTNAC	7 cut(s)	397, 444, 511, 532, 1006, 1435, 1787
MalI	GATC	6 cut(s)	129, 191, 288, 605, 704, 1667
MboI	GATC	6 cut(s)	127, 189, 286, 603, 702, 1665
MboII	GAAGA	6 cut(s)	565, 697, 787, 852, 1675, 1820
MflI	RGATCY	4 cut(s)	127, 189, 702, 1665
MhlI	GDGCHC	7 cut(s)	358, 457, 555, 675, 1242, 1576, 1779
MlsI	TGGCCA	2 cut(s)	34, 335
MluNI	TGGCCA	2 cut(s)	34, 335
MlyI	GAGTC	2 cut(s)	529, 927
MmeI	TCCRAC	1 cut(s)	1748
Mox20I	TGGCCA	2 cut(s)	34, 335
Mph1103I	ATGCAT	1 cut(s)	1759
MroXI	GAANNNNTTC	1 cut(s)	613
MscI	TGGCCA	2 cut(s)	34, 335
MseI	TTAA	7 cut(s)	57, 726, 908, 1224, 1313, 1332, 1478
MslI	CAYNNNNRTG	1 cut(s)	1782
Msp20I	TGGCCA	2 cut(s)	34, 335
MspI	CCGG	2 cut(s)	422, 1004
MspR9I	CCNGG	4 cut(s)	15, 337, 1358, 1430
Mva1269I	GAATGC	2 cut(s)	312, 1338
MvaI	CCWGG	4 cut(s)	15, 337, 1358, 1430
MvnI	CGCG	1 cut(s)	65
MwoI	GCNNNNNNNGC	5 cut(s)	71, 956, 1126, 1135, 1635
NcoI	CCATGG	2 cut(s)	35, 828
NdeI	CATATG	1 cut(s)	105
NdeII	GATC	6 cut(s)	127, 189, 286, 603, 702, 1665
NlaIV	GGNNCC	1 cut(s)	826
NmuCI	GTSAC	5 cut(s)	397, 511, 532, 1006, 1787
NsbI	TGCGCA	1 cut(s)	1628
NsiI	ATGCAT	1 cut(s)	1759
NspI	RCATGY	1 cut(s)	1757
NspV	TTCGAA	1 cut(s)	778
OliI	CACNNNNGTG	1 cut(s)	1782
PaeI	GCATGC	1 cut(s)	1757
PagI	TCATGA	2 cut(s)	657, 1504
PciSI	GCTCTTC	1 cut(s)	578
PctI	GAATGC	2 cut(s)	312, 1338
PdmI	GAANNNNTTC	1 cut(s)	613
PfeI	GAWTC	4 cut(s)	85, 857, 878, 1273
PkrI	GCNGC	2 cut(s)	408, 1068
PleI	GAGTC	2 cut(s)	529, 927
PpsI	GAGTC	2 cut(s)	529, 927
PsiI	TTATAA	1 cut(s)	1208
Psp6I	CCWGG	4 cut(s)	13, 335, 1356, 1428
PspGI	CCWGG	4 cut(s)	13, 335, 1356, 1428
PspN4I	GGNNCC	1 cut(s)	826
PspPI	GGNCC	3 cut(s)	244, 419, 1017
PstNI	CAGNNNCTG	1 cut(s)	1635
PsuI	RGATCY	4 cut(s)	127, 189, 702, 1665
RsaI	GTAC	4 cut(s)	752, 826, 986, 1124
RsaNI	GTAC	4 cut(s)	751, 825, 985, 1123
RseI	CAYNNNNRTG	1 cut(s)	1782
SalI	GTCGAC	1 cut(s)	263
SapI	GCTCTTC	1 cut(s)	578
SaqAI	TTAA	7 cut(s)	57, 726, 908, 1224, 1313, 1332, 1478
SatI	GCNGC	2 cut(s)	407, 1067
Sau3AI	GATC	6 cut(s)	127, 189, 286, 603, 702, 1665
Sau96I	GGNCC	3 cut(s)	244, 419, 1017
ScaI	AGTACT	1 cut(s)	1124
SchI	GAGTC	2 cut(s)	529, 927
ScrFI	CCNGG	4 cut(s)	15, 337, 1358, 1430
SduI	GDGCHC	7 cut(s)	358, 457, 555, 675, 1242, 1576, 1779
SfaNI	GCATC	5 cut(s)	159, 393, 772, 1014, 1159
SfcI	CTRYAG	1 cut(s)	1485
SfuI	TTCGAA	1 cut(s)	778
SinI	GGWCC	2 cut(s)	419, 1017
SmiMI	CAYNNNNRTG	1 cut(s)	1782
SmlI	CTYRAG	1 cut(s)	1679
SmoI	CTYRAG	1 cut(s)	1679
SphI	GCATGC	1 cut(s)	1757
SsiI	CCGC	2 cut(s)	65, 548
SspMI	CTAG	2 cut(s)	351, 840
StyD4I	CCNGG	4 cut(s)	13, 335, 1356, 1428
StyI	CCWWGG	6 cut(s)	35, 77, 350, 828, 954, 1712
TaaI	ACNGT	5 cut(s)	1046, 1281, 1318, 1566, 1623
TaqI	TCGA	7 cut(s)	249, 264, 426, 651, 684, 778, 1831
TatI	WGTACW	1 cut(s)	1122
TfiI	GAWTC	4 cut(s)	85, 857, 878, 1273
Tru1I	TTAA	7 cut(s)	57, 726, 908, 1224, 1313, 1332, 1478
Tru9I	TTAA	7 cut(s)	57, 726, 908, 1224, 1313, 1332, 1478
TscAI	CASTG	3 cut(s)	520, 680, 945
TseFI	GTSAC	5 cut(s)	397, 511, 532, 1006, 1787
TseI	GCWGC	2 cut(s)	406, 1066
Tsp45I	GTSAC	5 cut(s)	397, 511, 532, 1006, 1787
TspRI	CASTG	3 cut(s)	520, 680, 945
VneI	GTGCAC	1 cut(s)	1572
VpaK11BI	GGWCC	2 cut(s)	419, 1017
XagI	CCTNNNNNAGG	1 cut(s)	1382
XapI	RAATTY	2 cut(s)	18, 251
XceI	RCATGY	1 cut(s)	1757
XcmI	CCANNNNNNNNNTGG	1 cut(s)	159
XmaJI	CCTAGG	1 cut(s)	350
XmiI	GTMKAC	1 cut(s)	264
XmnI	GAANNNNTTC	1 cut(s)	613
XspI	CTAG	2 cut(s)	351, 840
ZrmI	AGTACT	1 cut(s)	1124
Zsp2I	ATGCAT	1 cut(s)	1759

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.