Prupe.1G515200_v2.0.a1

Annexin D1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0014753
Physical Location & Seq
Reverse (-)
42383036 .. 42385201
2166 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G515200.1

Sequence Viewer

Length: 951 bp
ATGTCGACGCTTAGAGTTCCTCAACAAGTTCCTCCTGCATCCGAAGACTGTGAGCAGCTCAAAAAGGCCTTCAAAGGATGGGGAACCAATGAGGACTTGATCATATCCATCTTGGGGCATAGAAATGCCCCTCAAAGAAAGGTTATCCGACAAACTTATGCTGAAGCTTATGGAGAAGATCTCCTCAAGGAGCTGGAAAAAGAACTTACAAGTGATTTTGAGAGGAGTATACTGCTTTGGACACTTGATCCAGCTGAACGTGATGCATTTTTGGCCAATGAAGCAACAAAGAAGTGGACTAAAAGCAATCAGGTTCTTGCTGAAATAGCCTGCAGTAGGTCTTCACATGAACTACTCATGGCAAGGCAGGCTTATCACTCTCGCTATAAGAAGTCCCTCGAAGAGGATGTTGCACATCACACAACCGGGGACTTTCGCAAGCTTTTGGCCCCTCTTGTTAGCTCATATAGATATGAGGGAGATGAGGTGAACCTGACACTGGCAAAATCAGAGGCTAAGCTACTCCATGAGAAGATCTCAGACAAGGCCTACAATGATGAGGATATCATCAGGATTTTGGCCACACGGAGCAAAGCACAGATCAATGCAACTCTCAATCACTACAAAAATGAATTTGGGAATGACATAAATAAGGATTTGAAAGCTGACCCCAAGGATGAGTACCTTGCAATACTAAGGGCCACAATTAAGTGCTTGGTCCGCCCTGAGAAGTACTTTGAGAAGTCTCTTCGTCTGGCAATCAACAAACGAGGAACAGATGAAGGAGCTCTCAGTAGAGTTGTCACCACAAGAGCTGAGGTTGACATGAAGCTTATAAAGGAACAGTACCACAAAAGAAATAGTGTCACTCTGGACCAGGCCATTAAAAAAGACACTACTGGAGATTATGAAAAAATGCTTCTGGCCCTGGTTGGACATGAGGATGCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Annexin

Protein Analysis

317

Amino Acids

36.14

Weight (kDa)

7.13

Isoelectric Point (pI)

38.06

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014753)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g37610
malus_domestica MD08G1182000.v1.1 MD15G1367300.v1.1
prunus_persica Prupe.1G515200_v2.0.a1
pyrus_communis pycom08g15520 pycom15g32930
rosa_chinensis RchiOBHm_Chr7g0239291
rosa_laevigata RLG00000000766
rosa_multiflora Rmu_sc0007840.1_g000005 Rmu_sc0026864.1_g000001
rosa_roxburghii Rroxscaffold_3G00221050
rosa_rugosa Rorug07G0327100
rosa_samantha Rh7AG480400 Rh7BG453100 Rh7CG498300 Rh7DG466400
rosa_wichuraiana Rw7G040240

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 836
AccI GTMKAC 2 cut(s) 5, 229
AciI CCGC 1 cut(s) 721
AclWI GGATC 1 cut(s) 242
AcoI YGGCCR 2 cut(s) 273, 579
AcsI RAATTY 1 cut(s) 632
AcuI CTGAAG 1 cut(s) 183
AfaI GTAC 3 cut(s) 683, 734, 848
AfiI CCNNNNNNNGG 4 cut(s) 114, 336, 403, 499
AgsI TTSAA 2 cut(s) 73, 661
AjnI CCWGG 2 cut(s) 876, 927
Alw21I GWGCWC 1 cut(s) 790
Alw26I GTCTC 1 cut(s) 750
AlwI GGATC 1 cut(s) 242
AoxI GGCC 8 cut(s) 66, 273, 447, 546, 579, 699, 879, 924
ApeKI GCWGC 1 cut(s) 55
ApoI RAATTY 1 cut(s) 632
AspS9I GGNCC 5 cut(s) 448, 699, 718, 874, 925
AsuC2I CCSGG 1 cut(s) 427
AsuHPI GGTGA 2 cut(s) 499, 796
AvaII GGWCC 2 cut(s) 718, 874
BalI TGGCCA 2 cut(s) 275, 581
BanII GRGCYC 1 cut(s) 790
BbsI GAAGAC 2 cut(s) 51, 333
Bbv12I GWGCWC 1 cut(s) 790
BbvCI CCTCAGC 1 cut(s) 816
BbvI GCAGC 1 cut(s) 67
BccI CCATC 2 cut(s) 72, 116
BciT130I CCWGG 2 cut(s) 878, 929
BclI TGATCA 1 cut(s) 99
BcnI CCSGG 1 cut(s) 427
BcoDI GTCTC 1 cut(s) 750
BfmI CTRYAG 1 cut(s) 331
BglII AGATCT 2 cut(s) 178, 534
BisI GCNGC 1 cut(s) 56
BlpI GCTNAGC 1 cut(s) 516
BlsI GCNGC 1 cut(s) 57
BmcAI AGTACT 1 cut(s) 734
Bme1390I CCNGG 3 cut(s) 427, 878, 929
Bme18I GGWCC 2 cut(s) 718, 874
BmgT120I GGNCC 5 cut(s) 448, 699, 718, 874, 925
BmiI GGNNCC 2 cut(s) 85, 450
BmrFI CCNGG 3 cut(s) 427, 878, 929
BmsI GCATC 3 cut(s) 47, 253, 934
BpiI GAAGAC 2 cut(s) 51, 333
BplI GAGNNNNNCTC 4 cut(s) 165, 197, 521, 553
BpmI CTGGAG 1 cut(s) 921
Bpu10I CCTNAGC 1 cut(s) 816
Bpu1102I GCTNAGC 1 cut(s) 516
BpuEI CTTGAG 1 cut(s) 170
BpuMI CCSGG 1 cut(s) 427
BsaJI CCNNGG 3 cut(s) 426, 672, 927
BsaXI ACNNNNNCTCC 2 cut(s) 471, 501
Bsc4I CCNNNNNNNGG 4 cut(s) 114, 336, 403, 499
Bse1I ACTGG 2 cut(s) 504, 904
BseBI CCWGG 2 cut(s) 878, 929
BseDI CCNNGG 3 cut(s) 426, 672, 927
BseGI GGATG 5 cut(s) 38, 83, 412, 682, 949
BseLI CCNNNNNNNGG 4 cut(s) 114, 336, 403, 499
BseMII CTCAG 4 cut(s) 552, 717, 805, 807
BseNI ACTGG 2 cut(s) 504, 904
BseRI GAGGAG 2 cut(s) 173, 238
BseXI GCAGC 1 cut(s) 67
BshFI GGCC 8 cut(s) 68, 275, 449, 548, 581, 701, 881, 926
BsiHKAI GWGCWC 1 cut(s) 790
BsiSI CCGG 1 cut(s) 426
BslFI GGGAC 2 cut(s) 379, 443
BslI CCNNNNNNNGG 4 cut(s) 114, 336, 403, 499
BsmAI GTCTC 1 cut(s) 750
BsmFI GGGAC 2 cut(s) 379, 443
BsnI GGCC 8 cut(s) 68, 275, 449, 548, 581, 701, 881, 926
Bsp1286I GDGCHC 1 cut(s) 790
Bsp143I GATC 5 cut(s) 99, 178, 247, 534, 600
Bsp1720I GCTNAGC 1 cut(s) 516
BspACI CCGC 1 cut(s) 721
BspANI GGCC 8 cut(s) 68, 275, 449, 548, 581, 701, 881, 926
BspCNI CTCAG 4 cut(s) 551, 718, 804, 808
BspLI GGNNCC 2 cut(s) 85, 450
BspMAI CTGCAG 1 cut(s) 335
BspPI GGATC 1 cut(s) 242
BsrI ACTGG 2 cut(s) 504, 904
BssECI CCNNGG 3 cut(s) 426, 672, 927
BssMI GATC 5 cut(s) 99, 178, 247, 534, 600
BssNAI GTATAC 1 cut(s) 230
BssT1I CCWWGG 1 cut(s) 672
Bst1107I GTATAC 1 cut(s) 230
Bst2UI CCWGG 2 cut(s) 878, 929
Bst4CI ACNGT 2 cut(s) 50, 846
Bst6I CTCTTC 2 cut(s) 396, 753
BstC8I GCNNGC 3 cut(s) 331, 369, 440
BstDEI CTNAG 7 cut(s) 11, 516, 538, 695, 726, 791, 816
BstENI CCTNNNNNAGG 2 cut(s) 334, 401
BstF5I GGATG 5 cut(s) 38, 83, 412, 682, 949
BstKTI GATC 5 cut(s) 102, 181, 250, 537, 603
BstMAI GTCTC 1 cut(s) 750
BstMBI GATC 5 cut(s) 99, 178, 247, 534, 600
BstMWI GCNNNNNNNGC 5 cut(s) 272, 281, 326, 368, 720
BstNI CCWGG 2 cut(s) 878, 929
BstSCI CCNGG 3 cut(s) 425, 876, 927
BstSFI CTRYAG 1 cut(s) 331
BstV1I GCAGC 1 cut(s) 67
BstV2I GAAGAC 2 cut(s) 51, 333
BstX2I RGATCY 2 cut(s) 178, 534
BstYI RGATCY 2 cut(s) 178, 534
BstZ17I GTATAC 1 cut(s) 230
BsuRI GGCC 8 cut(s) 68, 275, 449, 548, 581, 701, 881, 926
BtsCI GGATG 5 cut(s) 38, 83, 412, 682, 949
BtsIMutI CAGTG 1 cut(s) 497
Cac8I GCNNGC 3 cut(s) 331, 369, 440
Cfr13I GGNCC 5 cut(s) 448, 699, 718, 874, 925
CseI GACGC 1 cut(s) 16
Csp6I GTAC 3 cut(s) 682, 733, 847
CviAII CATG 5 cut(s) 347, 358, 527, 826, 938
CviQI GTAC 3 cut(s) 682, 733, 847
DdeI CTNAG 7 cut(s) 11, 516, 538, 695, 726, 791, 816
DpnI GATC 5 cut(s) 101, 180, 249, 536, 602
DpnII GATC 5 cut(s) 99, 178, 247, 534, 600
EaeI YGGCCR 2 cut(s) 273, 579
Eam1104I CTCTTC 2 cut(s) 396, 753
EarI CTCTTC 2 cut(s) 396, 753
EciI GGCGGA 1 cut(s) 710
Ecl136II GAGCTC 1 cut(s) 788
Eco130I CCWWGG 1 cut(s) 672
Eco147I AGGCCT 2 cut(s) 68, 548
Eco24I GRGCYC 1 cut(s) 790
Eco32I GATATC 1 cut(s) 565
Eco47I GGWCC 2 cut(s) 718, 874
Eco53kI GAGCTC 1 cut(s) 788
Eco57I CTGAAG 1 cut(s) 183
EcoICRI GAGCTC 1 cut(s) 788
EcoNI CCTNNNNNAGG 2 cut(s) 334, 401
EcoRII CCWGG 2 cut(s) 876, 927
EcoRV GATATC 1 cut(s) 565
EcoT14I CCWWGG 1 cut(s) 672
EcoT22I ATGCAT 1 cut(s) 268
EcoT38I GRGCYC 1 cut(s) 790
ErhI CCWWGG 1 cut(s) 672
FaeI CATG 5 cut(s) 350, 361, 530, 829, 941
FalI AAGNNNNNCTT 2 cut(s) 355, 387
FaqI GGGAC 2 cut(s) 379, 443
FatI CATG 5 cut(s) 346, 357, 526, 825, 937
FbaI TGATCA 1 cut(s) 99
FblI GTMKAC 2 cut(s) 5, 229
Fnu4HI GCNGC 1 cut(s) 56
FokI GGATG 4 cut(s) 25, 90, 419, 689
FriOI GRGCYC 1 cut(s) 790
Fsp4HI GCNGC 1 cut(s) 56
GluI GCNGC 1 cut(s) 56
GsuI CTGGAG 1 cut(s) 921
HaeIII GGCC 8 cut(s) 68, 275, 449, 548, 581, 701, 881, 926
HapII CCGG 1 cut(s) 426
HgaI GACGC 1 cut(s) 16
Hin1II CATG 5 cut(s) 350, 361, 530, 829, 941
HincII GTYRAC 2 cut(s) 6, 823
HindII GTYRAC 2 cut(s) 6, 823
HindIII AAGCTT 3 cut(s) 165, 440, 830
HpaII CCGG 1 cut(s) 426
HphI GGTGA 2 cut(s) 499, 796
Hpy166II GTNNAC 5 cut(s) 6, 230, 297, 490, 823
Hpy188I TCNGA 4 cut(s) 43, 149, 511, 541
Hpy188III TCNNGA 2 cut(s) 571, 872
Hpy8I GTNNAC 5 cut(s) 6, 230, 297, 490, 823
Hpy99I CGWCG 1 cut(s) 10
HpyAV CCTTC 2 cut(s) 79, 776
HpyCH4III ACNGT 2 cut(s) 50, 846
HpyCH4IV ACGT 1 cut(s) 259
HpyCH4V TGCA 6 cut(s) 38, 266, 333, 413, 608, 689
HpyF10VI GCNNNNNNNGC 5 cut(s) 272, 281, 326, 368, 720
HpyF3I CTNAG 7 cut(s) 11, 516, 538, 695, 726, 791, 816
HpySE526I ACGT 1 cut(s) 259
Hsp92II CATG 5 cut(s) 350, 361, 530, 829, 941
Ksp22I TGATCA 1 cut(s) 99
Kzo9I GATC 5 cut(s) 99, 178, 247, 534, 600
LmnI GCTCC 3 cut(s) 190, 588, 785
Lsp1109I GCAGC 1 cut(s) 67
LweI GCATC 3 cut(s) 47, 253, 934
MaeII ACGT 1 cut(s) 259
MaeIII GTNAC 2 cut(s) 802, 865
MalI GATC 5 cut(s) 101, 180, 249, 536, 602
MboI GATC 5 cut(s) 99, 178, 247, 534, 600
MboII GAAGA 6 cut(s) 56, 188, 333, 413, 544, 740
MflI RGATCY 2 cut(s) 178, 534
MhlI GDGCHC 1 cut(s) 790
MlsI TGGCCA 2 cut(s) 275, 581
MluCI AATT 2 cut(s) 632, 705
MluNI TGGCCA 2 cut(s) 275, 581
MmeI TCCRAC 2 cut(s) 172, 913
Mox20I TGGCCA 2 cut(s) 275, 581
Mph1103I ATGCAT 1 cut(s) 268
MscI TGGCCA 2 cut(s) 275, 581
MseI TTAA 2 cut(s) 708, 885
MslI CAYNNNNRTG 2 cut(s) 123, 942
Msp20I TGGCCA 2 cut(s) 275, 581
MspA1I CMGCKG 1 cut(s) 254
MspI CCGG 1 cut(s) 426
MspR9I CCNGG 3 cut(s) 427, 878, 929
MvaI CCWGG 2 cut(s) 878, 929
MwoI GCNNNNNNNGC 5 cut(s) 272, 281, 326, 368, 720
NciI CCSGG 1 cut(s) 427
NdeII GATC 5 cut(s) 99, 178, 247, 534, 600
NlaIII CATG 5 cut(s) 350, 361, 530, 829, 941
NlaIV GGNNCC 2 cut(s) 85, 450
NmuCI GTSAC 2 cut(s) 802, 865
NsiI ATGCAT 1 cut(s) 268
PceI AGGCCT 2 cut(s) 68, 548
PkrI GCNGC 1 cut(s) 57
PsiI TTATAA 1 cut(s) 836
Psp124BI GAGCTC 1 cut(s) 790
Psp6I CCWGG 2 cut(s) 876, 927
PspGI CCWGG 2 cut(s) 876, 927
PspN4I GGNNCC 2 cut(s) 85, 450
PspPI GGNCC 5 cut(s) 448, 699, 718, 874, 925
PstI CTGCAG 1 cut(s) 335
PsuI RGATCY 2 cut(s) 178, 534
PvuII CAGCTG 1 cut(s) 254
RsaI GTAC 3 cut(s) 683, 734, 848
RsaNI GTAC 3 cut(s) 682, 733, 847
RseI CAYNNNNRTG 2 cut(s) 123, 942
SacI GAGCTC 1 cut(s) 790
SalI GTCGAC 1 cut(s) 4
SaqAI TTAA 2 cut(s) 708, 885
SatI GCNGC 1 cut(s) 56
Sau3AI GATC 5 cut(s) 99, 178, 247, 534, 600
Sau96I GGNCC 5 cut(s) 448, 699, 718, 874, 925
ScaI AGTACT 1 cut(s) 734
ScrFI CCNGG 3 cut(s) 427, 878, 929
SduI GDGCHC 1 cut(s) 790
SfaNI GCATC 3 cut(s) 47, 253, 934
SfcI CTRYAG 1 cut(s) 331
SinI GGWCC 2 cut(s) 718, 874
SmiMI CAYNNNNRTG 2 cut(s) 123, 942
SmlI CTYRAG 1 cut(s) 185
SmoI CTYRAG 1 cut(s) 185
Sse9I AATT 2 cut(s) 632, 705
SseBI AGGCCT 2 cut(s) 68, 548
SsiI CCGC 1 cut(s) 721
SstI GAGCTC 1 cut(s) 790
StuI AGGCCT 2 cut(s) 68, 548
StyD4I CCNGG 3 cut(s) 425, 876, 927
StyI CCWWGG 1 cut(s) 672
TaaI ACNGT 2 cut(s) 50, 846
TaiI ACGT 1 cut(s) 262
TaqI TCGA 2 cut(s) 5, 399
TasI AATT 2 cut(s) 632, 705
TatI WGTACW 1 cut(s) 732
Tru1I TTAA 2 cut(s) 708, 885
Tru9I TTAA 2 cut(s) 708, 885
TscAI CASTG 1 cut(s) 504
TseFI GTSAC 2 cut(s) 802, 865
TseI GCWGC 1 cut(s) 55
Tsp45I GTSAC 2 cut(s) 802, 865
TspDTI ATGAA 6 cut(s) 294, 363, 645, 795, 842, 924
TspGWI ACGGA 1 cut(s) 601
TspRI CASTG 1 cut(s) 504
VpaK11BI GGWCC 2 cut(s) 718, 874
XagI CCTNNNNNAGG 2 cut(s) 334, 401
XapI RAATTY 1 cut(s) 632
XmiI GTMKAC 2 cut(s) 5, 229
ZrmI AGTACT 1 cut(s) 734
Zsp2I ATGCAT 1 cut(s) 268
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.