Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0015208

Physical Location & Seq

Genomic Coordinates Reverse (-)

45116318 .. 45117829

Gene Structure 1512 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G551900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 774 bp

ATGGCTTTCACAGCCGCTCCTCAGGCTTCACACACTTTCTTACTTGGGAGCCCAACAACAACAGCAGCAACAAGAAGAGGAGCAAGAAGAGCAACAACTAGAAAAGCAACAACCCATGTCAGATTACACGTGTCAGCATCACAAGGGCCAAGCAAATCTGAGAGGGCCCCACCAGGAGTTGATACAAGAATCCATTGGGAGAATGAGGATGAAGGTTGGATTGGAGGAAGCAGTGCAACTAGCAGCAGCAAAGCACAGCAGGCACAAGCAGAGCAAGAGCAGCAGAGCAATCTCTTGGAAGACAAGTTTGCTGATTTGCTGAATGACTCAATTTCTGATTCTCATTACCAGTTCTTAGGAGTATCAGCAGAGGCTGATCTAGAAGAAATCAAAGCTGCTTACCGAAGACTATCCAAAGAGTACCATCCAGACACCACTTCTCTTCCCCTAAAGACTGCATCCGACAAGTTCGTGAGGCTAAGAGAAATTTATAACGTGTTGAGCAACGAAGAGACCCGTAGATTTTACAACTGGACACTTGCTCAAGAGGCTGCAAGCCGCCAAGCAGAAATAATGAGAATGAAGTTGGAGGATCCTTATGTGAAAGAAGTAGAGAAGTACAAACCTGTGCCGGATATGGTTGATCGTCTAGGTGGAAGGAACATGGCGCTGGGCGATCAAGCAATGACTGCTCTCACCATTGATGTTTTCATTATCATTTTTGCTATTTGTTGTATCATATTTGTGATCTTCTTCAAAGAGCCATATTACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0009507 GO:0009534 GO:0009535 GO:0009536 GO:0009579 GO:0010598 GO:0016020 GO:0031976 GO:0031984 GO:0032991 GO:0034357 GO:0042651 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0055035 GO:0098796

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DnaJ

Protein Analysis

258

Amino Acids

28.92

Weight (kDa)

6.11

Isoelectric Point (pI)

45.8

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0015208)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G09350
fragaria_vesca	FvH4_5g32300
malus_domestica	MD15G1410800.v1.1
prunus_persica	Prupe.1G551900_v2.0.a1
pyrus_communis	pycom15g36560
rosa_chinensis	RchiOBHm_Chr7g0228561
rosa_laevigata	RLG00000001554
rosa_multiflora	Rmu_sc0006021.1_g000007 Rmu_sc0011334.1_g000002
rosa_roxburghii	Rroxscaffold_3G00231070
rosa_rugosa	Rorug07G0250500.1
rosa_samantha	Rh7AG402600 Rh7BG383500 Rh7CG422000 Rh7DG398400
rosa_wichuraiana	Rw7G033460

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	492
AccBSI	CCGCTC	1 cut(s)	17
AciI	CCGC	2 cut(s)	15, 559
AclWI	GGATC	2 cut(s)	587, 600
AcsI	RAATTY	1 cut(s)	486
AcvI	CACGTG	1 cut(s)	130
AfaI	GTAC	2 cut(s)	422, 620
AflIII	ACRYGT	3 cut(s)	127, 129, 495
AgsI	TTSAA	1 cut(s)	757
AjnI	CCWGG	1 cut(s)	172
AjuI	GAANNNNNNNTTGG	2 cut(s)	204, 236
AluBI	AGCT	1 cut(s)	395
AluI	AGCT	1 cut(s)	395
Alw26I	GTCTC	1 cut(s)	506
AlwI	GGATC	2 cut(s)	587, 600
AlwNI	CAGNNNCTG	1 cut(s)	374
AoxI	GGCC	2 cut(s)	146, 165
ApaI	GGGCCC	1 cut(s)	169
ApeKI	GCWGC	6 cut(s)	65, 243, 246, 280, 395, 551
ApoI	RAATTY	1 cut(s)	486
AspLEI	GCGC	1 cut(s)	670
AspS9I	GGNCC	3 cut(s)	146, 165, 166
AsuHPI	GGTGA	1 cut(s)	688
AxyI	CCTNAGG	1 cut(s)	21
BaeGI	GKGCMC	1 cut(s)	169
BamHI	GGATCC	1 cut(s)	592
BanII	GRGCYC	2 cut(s)	53, 169
BbrPI	CACGTG	1 cut(s)	130
BbsI	GAAGAC	2 cut(s)	306, 412
BbvI	GCAGC	6 cut(s)	77, 255, 258, 292, 382, 538
BccI	CCATC	1 cut(s)	432
BciT130I	CCWGG	1 cut(s)	174
BcoDI	GTCTC	1 cut(s)	506
BfaI	CTAG	5 cut(s)	99, 240, 380, 650, 772
BfoI	RGCGCY	1 cut(s)	671
BisI	GCNGC	8 cut(s)	15, 66, 244, 247, 281, 396, 552, 559
BlsI	GCNGC	8 cut(s)	16, 67, 245, 248, 282, 397, 553, 560
Bme1390I	CCNGG	1 cut(s)	174
BmgT120I	GGNCC	3 cut(s)	146, 165, 166
BmiI	GGNNCC	4 cut(s)	50, 167, 168, 594
BmrFI	CCNGG	1 cut(s)	174
BmsI	GCATC	2 cut(s)	146, 467
BpiI	GAAGAC	2 cut(s)	306, 412
BpuEI	CTTGAG	1 cut(s)	528
BsaAI	YACGTR	1 cut(s)	130
BsaI	GGTCTC	1 cut(s)	506
BsaXI	ACNNNNNCTCC	1 cut(s)	31
Bse1I	ACTGG	2 cut(s)	349, 536
Bse21I	CCTNAGG	1 cut(s)	21
Bse3DI	GCAATG	1 cut(s)	690
BseBI	CCWGG	1 cut(s)	174
BseGI	GGATG	3 cut(s)	214, 424, 458
BseMI	GCAATG	1 cut(s)	690
BseMII	CTCAG	2 cut(s)	35, 150
BseNI	ACTGG	2 cut(s)	349, 536
BseRI	GAGGAG	2 cut(s)	9, 93
BseSI	GKGCMC	1 cut(s)	169
BseXI	GCAGC	6 cut(s)	77, 255, 258, 292, 382, 538
BseYI	CCCAGC	1 cut(s)	670
BshFI	GGCC	2 cut(s)	148, 167
BsiSI	CCGG	1 cut(s)	632
BsmAI	GTCTC	1 cut(s)	506
BsnI	GGCC	2 cut(s)	148, 167
Bso31I	GGTCTC	1 cut(s)	506
Bsp120I	GGGCCC	1 cut(s)	165
Bsp1286I	GDGCHC	2 cut(s)	53, 169
Bsp143I	GATC	5 cut(s)	376, 592, 643, 676, 747
BspACI	CCGC	2 cut(s)	15, 559
BspANI	GGCC	2 cut(s)	148, 167
BspCNI	CTCAG	2 cut(s)	34, 151
BspLI	GGNNCC	4 cut(s)	50, 167, 168, 594
BspPI	GGATC	2 cut(s)	587, 600
BspQI	GCTCTTC	1 cut(s)	82
BspTNI	GGTCTC	1 cut(s)	506
BsrBI	CCGCTC	1 cut(s)	17
BsrDI	GCAATG	1 cut(s)	690
BsrI	ACTGG	2 cut(s)	349, 536
BssMI	GATC	5 cut(s)	376, 592, 643, 676, 747
Bst2UI	CCWGG	1 cut(s)	174
Bst6I	CTCTTC	4 cut(s)	70, 82, 447, 504
BstAPI	GCANNNNNTGC	1 cut(s)	689
BstBAI	YACGTR	1 cut(s)	130
BstC8I	GCNNGC	2 cut(s)	261, 556
BstDEI	CTNAG	4 cut(s)	21, 159, 355, 479
BstF5I	GGATG	3 cut(s)	214, 424, 458
BstH2I	RGCGCY	1 cut(s)	671
BstHHI	GCGC	1 cut(s)	670
BstKTI	GATC	5 cut(s)	379, 595, 646, 679, 750
BstMAI	GTCTC	1 cut(s)	506
BstMBI	GATC	5 cut(s)	376, 592, 643, 676, 747
BstMWI	GCNNNNNNNGC	7 cut(s)	11, 23, 89, 260, 280, 548, 689
BstNI	CCWGG	1 cut(s)	174
BstSCI	CCNGG	1 cut(s)	172
BstSLI	GKGCMC	1 cut(s)	169
BstV1I	GCAGC	6 cut(s)	77, 255, 258, 292, 382, 538
BstV2I	GAAGAC	2 cut(s)	306, 412
BstX2I	RGATCY	1 cut(s)	592
BstYI	RGATCY	1 cut(s)	592
Bsu36I	CCTNAGG	1 cut(s)	21
BsuRI	GGCC	2 cut(s)	148, 167
BtsCI	GGATG	3 cut(s)	214, 424, 458
BtsI	GCAGTG	1 cut(s)	238
BtsIMutI	CAGTG	1 cut(s)	238
Cac8I	GCNNGC	2 cut(s)	261, 556
CaiI	CAGNNNCTG	1 cut(s)	374
CfoI	GCGC	1 cut(s)	670
Cfr13I	GGNCC	3 cut(s)	146, 165, 166
Csp6I	GTAC	2 cut(s)	421, 619
CviAII	CATG	2 cut(s)	116, 664
CviQI	GTAC	2 cut(s)	421, 619
DdeI	CTNAG	4 cut(s)	21, 159, 355, 479
DpnI	GATC	5 cut(s)	378, 594, 645, 678, 749
DpnII	GATC	5 cut(s)	376, 592, 643, 676, 747
Eam1104I	CTCTTC	4 cut(s)	70, 82, 447, 504
EarI	CTCTTC	4 cut(s)	70, 82, 447, 504
Eco24I	GRGCYC	2 cut(s)	53, 169
Eco31I	GGTCTC	1 cut(s)	506
Eco72I	CACGTG	1 cut(s)	130
Eco81I	CCTNAGG	1 cut(s)	21
EcoO109I	RGGNCCY	2 cut(s)	165, 166
EcoRII	CCWGG	1 cut(s)	172
EcoT38I	GRGCYC	2 cut(s)	53, 169
FaeI	CATG	2 cut(s)	119, 667
FaiI	YATR	7 cut(s)	117, 492, 600, 638, 665, 740, 766
FatI	CATG	2 cut(s)	115, 663
Fnu4HI	GCNGC	8 cut(s)	15, 66, 244, 247, 281, 396, 552, 559
FokI	GGATG	3 cut(s)	221, 411, 445
FriOI	GRGCYC	2 cut(s)	53, 169
Fsp4HI	GCNGC	8 cut(s)	15, 66, 244, 247, 281, 396, 552, 559
FspBI	CTAG	5 cut(s)	99, 240, 380, 650, 772
GlaI	GCGC	1 cut(s)	669
GluI	GCNGC	8 cut(s)	15, 66, 244, 247, 281, 396, 552, 559
GsaI	CCCAGC	1 cut(s)	674
HaeII	RGCGCY	1 cut(s)	671
HaeIII	GGCC	2 cut(s)	148, 167
HapII	CCGG	1 cut(s)	632
HhaI	GCGC	1 cut(s)	670
Hin1II	CATG	2 cut(s)	119, 667
Hin6I	GCGC	1 cut(s)	668
HinP1I	GCGC	1 cut(s)	668
HinfI	GANTC	3 cut(s)	189, 326, 338
HpaII	CCGG	1 cut(s)	632
HphI	GGTGA	1 cut(s)	688
Hpy188I	TCNGA	4 cut(s)	122, 160, 337, 463
Hpy188III	TCNNGA	4 cut(s)	380, 428, 472, 545
HpyAV	CCTTC	2 cut(s)	206, 651
HpyCH4IV	ACGT	2 cut(s)	129, 495
HpyCH4V	TGCA	3 cut(s)	236, 458, 554
HpyF10VI	GCNNNNNNNGC	7 cut(s)	11, 23, 89, 260, 280, 548, 689
HpyF3I	CTNAG	4 cut(s)	21, 159, 355, 479
HpySE526I	ACGT	2 cut(s)	129, 495
Hsp92II	CATG	2 cut(s)	119, 667
HspAI	GCGC	1 cut(s)	668
Kzo9I	GATC	5 cut(s)	376, 592, 643, 676, 747
LguI	GCTCTTC	1 cut(s)	82
LmnI	GCTCC	3 cut(s)	22, 48, 80
Lsp1109I	GCAGC	6 cut(s)	77, 255, 258, 292, 382, 538
LweI	GCATC	2 cut(s)	146, 467
MaeI	CTAG	5 cut(s)	99, 240, 380, 650, 772
MaeII	ACGT	2 cut(s)	129, 495
MalI	GATC	5 cut(s)	378, 594, 645, 678, 749
MbiI	CCGCTC	1 cut(s)	17
MboI	GATC	5 cut(s)	376, 592, 643, 676, 747
MboII	GAAGA	9 cut(s)	87, 99, 311, 395, 417, 434, 521, 742, 745
MflI	RGATCY	1 cut(s)	592
MhlI	GDGCHC	2 cut(s)	53, 169
MluCI	AATT	2 cut(s)	330, 486
MlyI	GAGTC	1 cut(s)	320
MmeI	TCCRAC	3 cut(s)	197, 486, 567
MnlI	CCTC	9 cut(s)	30, 71, 156, 199, 218, 364, 468, 541, 583
MslI	CAYNNNNRTG	1 cut(s)	743
MspI	CCGG	1 cut(s)	632
MspR9I	CCNGG	1 cut(s)	174
MvaI	CCWGG	1 cut(s)	174
MwoI	GCNNNNNNNGC	7 cut(s)	11, 23, 89, 260, 280, 548, 689
NdeII	GATC	5 cut(s)	376, 592, 643, 676, 747
NlaIII	CATG	2 cut(s)	119, 667
NlaIV	GGNNCC	4 cut(s)	50, 167, 168, 594
PciSI	GCTCTTC	1 cut(s)	82
PfeI	GAWTC	2 cut(s)	189, 338
PkrI	GCNGC	8 cut(s)	16, 67, 245, 248, 282, 397, 553, 560
PleI	GAGTC	1 cut(s)	320
PmaCI	CACGTG	1 cut(s)	130
PmlI	CACGTG	1 cut(s)	130
PpsI	GAGTC	1 cut(s)	320
Ppu21I	YACGTR	1 cut(s)	130
PsiI	TTATAA	1 cut(s)	492
Psp6I	CCWGG	1 cut(s)	172
PspCI	CACGTG	1 cut(s)	130
PspFI	CCCAGC	1 cut(s)	670
PspGI	CCWGG	1 cut(s)	172
PspN4I	GGNNCC	4 cut(s)	50, 167, 168, 594
PspOMI	GGGCCC	1 cut(s)	165
PspPI	GGNCC	3 cut(s)	146, 165, 166
PstNI	CAGNNNCTG	1 cut(s)	374
PsuI	RGATCY	1 cut(s)	592
RsaI	GTAC	2 cut(s)	422, 620
RsaNI	GTAC	2 cut(s)	421, 619
RseI	CAYNNNNRTG	1 cut(s)	743
SapI	GCTCTTC	1 cut(s)	82
SatI	GCNGC	8 cut(s)	15, 66, 244, 247, 281, 396, 552, 559
Sau3AI	GATC	5 cut(s)	376, 592, 643, 676, 747
Sau96I	GGNCC	3 cut(s)	146, 165, 166
SchI	GAGTC	1 cut(s)	320
ScrFI	CCNGG	1 cut(s)	174
SduI	GDGCHC	2 cut(s)	53, 169
SetI	ASST	6 cut(s)	132, 217, 397, 498, 628, 655
SfaNI	GCATC	2 cut(s)	146, 467
SmiMI	CAYNNNNRTG	1 cut(s)	743
SmlI	CTYRAG	1 cut(s)	543
SmoI	CTYRAG	1 cut(s)	543
Sse9I	AATT	2 cut(s)	330, 486
SsiI	CCGC	2 cut(s)	15, 559
SspMI	CTAG	5 cut(s)	99, 240, 380, 650, 772
StyD4I	CCNGG	1 cut(s)	172
TaiI	ACGT	2 cut(s)	132, 498
TasI	AATT	2 cut(s)	330, 486
TatI	WGTACW	1 cut(s)	618
TauI	GCSGC	2 cut(s)	17, 561
TfiI	GAWTC	2 cut(s)	189, 338
TscAI	CASTG	1 cut(s)	238
TseI	GCWGC	6 cut(s)	65, 243, 246, 280, 395, 551
TspDTI	ATGAA	3 cut(s)	225, 596, 700
TspRI	CASTG	1 cut(s)	238
XapI	RAATTY	1 cut(s)	486
XbaI	TCTAGA	1 cut(s)	379
XspI	CTAG	5 cut(s)	99, 240, 380, 650, 772

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.